Csor.00g240940 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g240940
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	protein RDM16-like isoform X1
Location	Csor_Chr04: 1224733 .. 1230595 (+)
RNA-Seq Expression	Csor.00g240940
Synteny	Csor.00g240940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACAGGGTTACCGAGAAGGAGAGATCAAGCAAGCGTTCTCGAGAAGAACGCAATGGTGACCACAAGCATCGAAGTCGAGACGCCGAGGAAAAACATTTCTCCAAGGATGAAAAGCACCGTGAGTCCGATCACTCCCATCGTCGGCGTCACCATCGGTCGGACCGTGATTCAAAGCTTGAGCGTTCGCATGAGTCTCGCGATCTCAAACATCGGCGTGATAGGTCTCCCGATGAGCGTGAGAGCTCCCAAGATCGAGATTTTAAGCGGGAAAGATCTTATGATGTTAGGGATGAGAGAGAGAGGAGTAGAGATAGGGTTTCGTCTAAGCGAGAGCGGTCGAGTGAGCCGAGAGGGGAGAGAGAGGGCAGCAAGGAGAGGGGCAAGCTACGCGAGGTTAGGCGCGAGCAGTCGGACGATGAGTATGAACGGGAAGACTCATTGGGGCCAATCCAGAATTCTGTACGTTCTTCAAACAAGAGGAAGGAGAGGGGAGGAAGTGAGGATAGGTTTGATGGTGGTGAGAAGAGGGCTAGGGCTTCAGAAGACGGGAAGGATCTTAGACGAAATGAAGACGGGAAGGAAGTGAATGGAGCTGAGATGGATGACAGAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGATGATGAAGCAAACATGAGTGGTAGGGGAAAGAGGGAGAGGAAGCGGTTTGGGGATCGGGCAAAGGAAGAGGATAATGGTGGAAATGTTGATGGGAAAGTTCAGGTTGGAGGCACCTCTGATGAAAAAAGGTCCACGGGGAATGTAAGTTCTATTTTGCATATGCTGGATTTTATCGTAATAATGAATTATACTACTTTGATTTCTTCTTACAACGTTGGCATTGGTTTGTAGAATCATTTAACTGTTCATCAGCTTTACTTAGCAATTGGGTTCTGTCATATATGCTAGTACTATGTTTTGTTTTACATTTCATTTGACAATCCAATGTAGTTCCACTTTGTTCTCATCAATTGGGGAAAGTCTCTTGTTTCTGATAAAAATGAAATTAAGCAATGGAACAAGTACATTTGAGGAGACTTCCAGAATTTCTTTATCTATCCGCAACACATCGAGGTTTTTTCCGTGCTGACTTCCCTCTTCTCTGCTACTGACTGTTTTTTCTTCCCCTTAGGCTCTACATGGGCTTAGGCCCGCTCTAATTTTCCCCGCTCTATATTCTTTTCTTCCCCTCTGTTTAGAGCTTCGTGTAAATGTATCTGAATAGAGACCCATCAGAGCCAAAGAGTATCAAAATCCATATCTTCTAGAACTGACAGGAAGTTTATATGTATATATTATAAGATTTTGTGACCTATTTTCTTTCATTTTTTTCCCAATTAAAGTTAGTTTCTTGTCTTTTTTTATTATTTATTATTTATTTTTTTAATAAAAATGTCATTGTGTGACCTTTTGGCTTGGAATTTTGTTTATGGGAGGGGGTTTTAGTGTGGGCAAAGCCATTTGTCTCTGAACATATGAAGCCTAAGAATTGTCATTGGTAGGATTTGTATTAATACAGGATTTTGATCTGTTTAGTTGTGAACAAATTATGCTCACAATAGAGGGTTCTGTTGATGGACGGTATGAGCTCTAGTATTTTATTTGATGTAGTTATGCTAATTAAGTTGCATCTTAAGGATTTTTTTAAGTTTTAGCTCTGAGCTGAAATTATTTTATTTCAAACAAGAAGAATACATGTAGAACTCAGAATTTTATTCATTCTTTGGTATATTTAGCATTTTGATAATTTTCTAGCCATTAATTCTGAAGTGGGAGGTAGACTGAGTGTTATTTGATGTTTCTTGGATGCAAGAGCAGACATTTTTGTAAATGTTGTTAATAGTTTGGTTTATAACGCACATACAGGTTTCTTATAGCAATTTTTACCTTGCTCACATTTGTTTTTGAAGTGTGACTAGATTGATTTATTCTTTAATATTGAGGAGATTCCTTCATGATTGTGATGCCTTTGGGCAGTGACTGGTAGGACTTAAGAAACTAACGTCGTAATTTTGCAGGGATCTACAGTGGAACATATTGACATGTCATCTAGTGTGCCCCAGAATTTGTTACATCCTGGTCATTCCCATCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTGCCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGACATCTTCAACCGCGGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCTTGGTAAGTTTCAAGACATCGATACTTTGACTCATTTTGTAGCTATTTTCACCCTCTGATGTTGCATTTACTACCTATGCATGGATGCATGCATACACGTGTGTTTGTATTGGGTATTTCCTTTTTGTATGAAATGTTATATTATTTGATCTTATAGATGAAGAAGGATGGGTGGTCAAGTTCTGCAAGTAGCTCAGCTGTGAAATCGGAGGAGAAAGCTAAGCCAGCAGGTGGTTTATTGGGGCTATCGGCAACTACAAATGTCACCACTACCCATTCTGCTGGGGTAGCATCAAGTTCGTCGACCTTACCAGCTGCCAATGCACTTGGTGGTGGTATTAATGTTCCAGCTAGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCGGGGAATGTAGCAACTGATGTTGCTGTTTCACAGAAGCCAAGCAAGGCTCCTGTGCTTCGCCTTGATGCACTCGGCAGGGAAATAGACGAACAAGGAAATGTTGTCAATTTAACCAAACCCAGTGACCTCAGCACTCTGAAGGTTTGGAGCGAACTTCTGACCCTTTTAGAAGTTTTCTTTATGTAGTTAACTTTGAACGGATTGACCTCACATATATTTTTAACATTGCAGGTTAACATCAACAAACAGAAAAAGGATGCATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCCGAATCAAATCCTCATTATGATGAGAGGATGGGTATAAATAAAACTAAACTGTTAAGGCCAAAGAGGATGAGTTTCCTGTTCGTTGAGGAGGGGAAATGGTCCAAGGAGGCTGAAACCATCAAATTAAGGGTACTTATCTCTATTCATGCTTACTTTTGGTTAAAAAATGTTCATGTAATTTCTTAAAAAAAAATGCTCATGTTCTCGTTACAGAGTAAATTTGGAGAGGCACAAGCTAAAGAACGAAGGGAGAAGCAGGCACAATTGGCCAAGGCCAAGGCTGCACCTGATATAAATCCAAATCTGATCGAGGTATCGGAGAGAGTTGTGAAAGAAAAAACAAAAGAACCAATTCCTGAAATCGAGTGGTGGTAAGCTCGCTGATATTTATTTTCTGTTCTCATAATCCTGAGTTTTTTCTATTTTTATTTTTTGCTTGCCGTTTCATGATTGTTCAATCAATGATATGTGTCTGTGTGCCTGTGAAAATTTATATGCCAAATAGTTACAGTAAAGGAATGTTTTCAGGGATCAAGTCTGCATGTCCTTTTCCTTCATCATTAACGGACTGCTTGGTAGTCATGTCTGGCTGTTAACCATTTCGTTTTTTGTTTTTGAAAATTAAGCTTATAAACACTACCTCCGCGGGTGAGTTTTTTTTGTTTAGTATCTTCTTTCTAGTGTTTTCAATATCCAAGCCAAGTTTCAAAAACTATTGCATTGTTTAATAATTCTTGTTTCCTTCCAATTTTGTGGTACGCTTTTCACCTTAAAAAACACATTTGTTGAACCCTAAGACAAATTTCAAAAAATAAATTCAAGACTATTAAAACTACTTTTTAATTTTTAAAATTTATCTTGGTTCTTGAAAATGCTTCTAAAAAGTAGGCAATGAAGTTAGAAAACTACAAGTGAAAGTAGTGTTTATAAAAGGTTAAATTTCAAAAACAGAAAACAAAAAACAAAATAGTTATAAATGGAGCCTAAAGAAGTTTTTAAAACTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTTTCTCCTAAAATTTTGATATCACATGGGCTTGAGATGCTTGGCGATGTAGTATCTTTGTGCTTTGGTCTATAAGGACATTGTGTAGTGTTGCATCTGATTGATTGCAAGCTTCGGACATTTTTTTTCCCTTTTCTTCTTTTGCATAGTTAAATTTTCTAGCGTTTATTTTTTTAAGTTCTAGCTTATATTGGGATCCCTTATGAGATCCAATTCTAATGTTCTGTTTTGTTTCCTAAAACTATTTAGGGATGTCCCTCTTTTGCATTCTGGCACATATGAGCATGTGGGAGATGGTTTTGTGGCTGATGATAAAATAAGGAAGGATAAGATTACCATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGCTGAACCAGCTCCTCCTCCTCCTCAACCACTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGTACGCAGCGTCGTCTGGCAAAGGAGAAAGATAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCGAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACAAAACTTGAGAAAGAGATTCGTGCTGCAGCTGCTGAGAGGGAACAAGCTCACATAGATCGAAATATTGCACGAAAACTGACCCCAGCAGAACGCCGTGAAAAGAAAGAACGCAAGCTTTTTGAGGATACAAATTCACTGGAGACAATTGTATCCGTTTACAAGATCAACGATTTATCTCACCCACAGGCCCGGTTTAAAGTTGATGTTAATGCTAGAGAGAACCGTTTGAGTGGATGTGCTGTGATATGTGACAACATCAGTGTTTTGGTCGTTGAAGGGGGCAGCAAATCCATCAAGAGGTATGGGAAGCTTATGCTTAAGCGCATAAATTGGGCCGCTTCCGTGAAAGAGGAAGAAGAGGAGGATGAAAATGACGACAAGCCCGTTAATAAATGTTCATTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCCATAAATTTTCTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGGTGTTGGTCATTATTGGGATCTCGCCGTTAACTTTTCCGATGATCTAATATAATTGGAACTTCTGCAGGTAGTAGTTGATGTGATGTGTGTTCATCATAGTATTGCGGACAATTTCAGCTGATGGTTTGCTTTGGTGTCTTGTATGGTTGAGAATTGTTTGAAGTTGATATAACATCACGGGATGGTCTCGCCTGTTTCCATTAATAGGTGGGGAAATTTCATTATGATCCAACTGAGTTCATGGGATCTTCACCTATTTCATGAATCAGAATCAGACTTCTGTATGAAAAAATGTTGTTGGTAGCAACTAGCAAACAGAACTTTGAAATCGTAGCACGCAAGATCATCATCATCTCAAGAAAAGGGTATTATGTCCAATTCGCCTATAGTCTTTCATTTCGTGTACTTAAATAGATGAGTTGCGACTCTTTTCTCCACCTTTCATTACCAAGGAATGTTTGACAATCCATTTCGTTTGGTAGTTAGATGAAGTGAAGGTGGCTTTGAATAATTTTCTACTCGAAAGAAAAGGTACTTTTTTTAGTCTTTTAACCACTATGCCTTGCTGTTTTTGTTAGCTGTATTTGGTTGATCCTCTTCTTCCTTGTTTTTTTTTTATCTTGATTCTTTTCTAATTGTAGGTTCGTAA

mRNA sequence

ATGGACAGGGTTACCGAGAAGGAGAGATCAAGCAAGCGTTCTCGAGAAGAACGCAATGGTGACCACAAGCATCGAAGTCGAGACGCCGAGGAAAAACATTTCTCCAAGGATGAAAAGCACCGTGAGTCCGATCACTCCCATCGTCGGCGTCACCATCGGTCGGACCGTGATTCAAAGCTTGAGCGTTCGCATGAGTCTCGCGATCTCAAACATCGGCGTGATAGGTCTCCCGATGAGCGTGAGAGCTCCCAAGATCGAGATTTTAAGCGGGAAAGATCTTATGATGTTAGGGATGAGAGAGAGAGGAGTAGAGATAGGGTTTCGTCTAAGCGAGAGCGGTCGAGTGAGCCGAGAGGGGAGAGAGAGGGCAGCAAGGAGAGGGGCAAGCTACGCGAGGTTAGGCGCGAGCAGTCGGACGATGAGTATGAACGGGAAGACTCATTGGGGCCAATCCAGAATTCTGTACGTTCTTCAAACAAGAGGAAGGAGAGGGGAGGAAGTGAGGATAGGTTTGATGGTGGTGAGAAGAGGGCTAGGGCTTCAGAAGACGGGAAGGATCTTAGACGAAATGAAGACGGGAAGGAAGTGAATGGAGCTGAGATGGATGACAGAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGATGATGAAGCAAACATGAGTGGTAGGGGAAAGAGGGAGAGGAAGCGGTTTGGGGATCGGGCAAAGGAAGAGGATAATGGTGGAAATGTTGATGGGAAAGTTCAGGTTGGAGGCACCTCTGATGAAAAAAGGTCCACGGGGAATGGATCTACAGTGGAACATATTGACATGTCATCTAGTGTGCCCCAGAATTTGTTACATCCTGGTCATTCCCATCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTGCCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGACATCTTCAACCGCGGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCTTGATGAAGAAGGATGGGTGGTCAAGTTCTGCAAGTAGCTCAGCTGTGAAATCGGAGGAGAAAGCTAAGCCAGCAGGTGGTTTATTGGGGCTATCGGCAACTACAAATGTCACCACTACCCATTCTGCTGGGGTAGCATCAAGTTCGTCGACCTTACCAGCTGCCAATGCACTTGGTGGTGGTATTAATGTTCCAGCTAGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCGGGGAATGTAGCAACTGATGTTGCTGTTTCACAGAAGCCAAGCAAGGCTCCTGTGCTTCGCCTTGATGCACTCGGCAGGGAAATAGACGAACAAGGAAATGTTGTCAATTTAACCAAACCCAGTGACCTCAGCACTCTGAAGGTTAACATCAACAAACAGAAAAAGGATGCATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCCGAATCAAATCCTCATTATGATGAGAGGATGGGTATAAATAAAACTAAACTGTTAAGGCCAAAGAGGATGAGTTTCCTGTTCGTTGAGGAGGGGAAATGGTCCAAGGAGGCTGAAACCATCAAATTAAGGAGTAAATTTGGAGAGGCACAAGCTAAAGAACGAAGGGAGAAGCAGGCACAATTGGCCAAGGCCAAGGCTGCACCTGATATAAATCCAAATCTGATCGAGGTATCGGAGAGAGTTGTGAAAGAAAAAACAAAAGAACCAATTCCTGAAATCGAGTGGTGGGATGTCCCTCTTTTGCATTCTGGCACATATGAGCATGTGGGAGATGGTTTTGTGGCTGATGATAAAATAAGGAAGGATAAGATTACCATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGCTGAACCAGCTCCTCCTCCTCCTCAACCACTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGTACGCAGCGTCGTCTGGCAAAGGAGAAAGATAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCGAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACAAAACTTGAGAAAGAGATTCGTGCTGCAGCTGCTGAGAGGGAACAAGCTCACATAGATCGAAATATTGCACGAAAACTGACCCCAGCAGAACGCCGTGAAAAGAAAGAACGCAAGCTTTTTGAGGATACAAATTCACTGGAGACAATTGTATCCGTTTACAAGATCAACGATTTATCTCACCCACAGGCCCGGTTTAAAGTTGATGTTAATGCTAGAGAGAACCGTTTGAGTGGATGTGCTGTGATATGTGACAACATCAGTGTTTTGGTCGTTGAAGGGGGCAGCAAATCCATCAAGAGGTATGGGAAGCTTATGCTTAAGCGCATAAATTGGGCCGCTTCCGTGAAAGAGGAAGAAGAGGAGGATGAAAATGACGACAAGCCCGTTAATAAATGTTCATTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCCATAAATTTTCTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGATGAAGTGAAGGTGGCTTTGAATAATTTTCTACTCGAAAGAAAAGGTTCGTAA

Coding sequence (CDS)

ATGGACAGGGTTACCGAGAAGGAGAGATCAAGCAAGCGTTCTCGAGAAGAACGCAATGGTGACCACAAGCATCGAAGTCGAGACGCCGAGGAAAAACATTTCTCCAAGGATGAAAAGCACCGTGAGTCCGATCACTCCCATCGTCGGCGTCACCATCGGTCGGACCGTGATTCAAAGCTTGAGCGTTCGCATGAGTCTCGCGATCTCAAACATCGGCGTGATAGGTCTCCCGATGAGCGTGAGAGCTCCCAAGATCGAGATTTTAAGCGGGAAAGATCTTATGATGTTAGGGATGAGAGAGAGAGGAGTAGAGATAGGGTTTCGTCTAAGCGAGAGCGGTCGAGTGAGCCGAGAGGGGAGAGAGAGGGCAGCAAGGAGAGGGGCAAGCTACGCGAGGTTAGGCGCGAGCAGTCGGACGATGAGTATGAACGGGAAGACTCATTGGGGCCAATCCAGAATTCTGTACGTTCTTCAAACAAGAGGAAGGAGAGGGGAGGAAGTGAGGATAGGTTTGATGGTGGTGAGAAGAGGGCTAGGGCTTCAGAAGACGGGAAGGATCTTAGACGAAATGAAGACGGGAAGGAAGTGAATGGAGCTGAGATGGATGACAGAAAGGAGCGGAGGAGATTTGCTGACGGTGAGAAAGATGATGAAGCAAACATGAGTGGTAGGGGAAAGAGGGAGAGGAAGCGGTTTGGGGATCGGGCAAAGGAAGAGGATAATGGTGGAAATGTTGATGGGAAAGTTCAGGTTGGAGGCACCTCTGATGAAAAAAGGTCCACGGGGAATGGATCTACAGTGGAACATATTGACATGTCATCTAGTGTGCCCCAGAATTTGTTACATCCTGGTCATTCCCATCCTATCAAGGTATCTTCAATTTCTACCACAAATGAAAATAAGGGAGTTAGTATTGCCAGATCTCATGAGGTTCATGGAAAATCTAGTACAGATGGGACATCTTCAACCGCGGGGAAAAGTGGAAATCTCTCTCTTGATGCTTTAGCAAAAGCTAAGAAAGCTTTACAGATGCAGAAAGAATTGGCCGAGAAGTTGAAGAAAATTCCCTTGATGAAGAAGGATGGGTGGTCAAGTTCTGCAAGTAGCTCAGCTGTGAAATCGGAGGAGAAAGCTAAGCCAGCAGGTGGTTTATTGGGGCTATCGGCAACTACAAATGTCACCACTACCCATTCTGCTGGGGTAGCATCAAGTTCGTCGACCTTACCAGCTGCCAATGCACTTGGTGGTGGTATTAATGTTCCAGCTAGCCTTACCTCTATACCCCATTTTGAAGCTGTCAAACGTGCACAGGAGCTTGCTGCCAGGATGGGATTTCGCCAGGATCCAGAGTTTGCTCCTCTTATAAATTTGTTTCCGGGGAATGTAGCAACTGATGTTGCTGTTTCACAGAAGCCAAGCAAGGCTCCTGTGCTTCGCCTTGATGCACTCGGCAGGGAAATAGACGAACAAGGAAATGTTGTCAATTTAACCAAACCCAGTGACCTCAGCACTCTGAAGGTTAACATCAACAAACAGAAAAAGGATGCATTTCAAATTCTTAAACCTGAACTTGATGTGGATCCCGAATCAAATCCTCATTATGATGAGAGGATGGGTATAAATAAAACTAAACTGTTAAGGCCAAAGAGGATGAGTTTCCTGTTCGTTGAGGAGGGGAAATGGTCCAAGGAGGCTGAAACCATCAAATTAAGGAGTAAATTTGGAGAGGCACAAGCTAAAGAACGAAGGGAGAAGCAGGCACAATTGGCCAAGGCCAAGGCTGCACCTGATATAAATCCAAATCTGATCGAGGTATCGGAGAGAGTTGTGAAAGAAAAAACAAAAGAACCAATTCCTGAAATCGAGTGGTGGGATGTCCCTCTTTTGCATTCTGGCACATATGAGCATGTGGGAGATGGTTTTGTGGCTGATGATAAAATAAGGAAGGATAAGATTACCATATATGTGGAGCATCCTCGTCCTATTGAACCTCCTGCTGAACCAGCTCCTCCTCCTCCTCAACCACTAAAGCTAACAAAGAAGGAGCAGAAAAAACTCCGTACGCAGCGTCGTCTGGCAAAGGAGAAAGATAGACAGGAGATGATTAGACAAGGCCTGATAGAACCACCGAAACCAAAAGTTAAAATGAGCAATTTAATGAAAGTTCTTGGCTCAGAAGCAACCCAAGATCCTACAAAACTTGAGAAAGAGATTCGTGCTGCAGCTGCTGAGAGGGAACAAGCTCACATAGATCGAAATATTGCACGAAAACTGACCCCAGCAGAACGCCGTGAAAAGAAAGAACGCAAGCTTTTTGAGGATACAAATTCACTGGAGACAATTGTATCCGTTTACAAGATCAACGATTTATCTCACCCACAGGCCCGGTTTAAAGTTGATGTTAATGCTAGAGAGAACCGTTTGAGTGGATGTGCTGTGATATGTGACAACATCAGTGTTTTGGTCGTTGAAGGGGGCAGCAAATCCATCAAGAGGTATGGGAAGCTTATGCTTAAGCGCATAAATTGGGCCGCTTCCGTGAAAGAGGAAGAAGAGGAGGATGAAAATGACGACAAGCCCGTTAATAAATGTTCATTGGTATGGCAAGGAAGTGTTGCCAAATCTAGCTTCCATAAATTTTCTATCCAGGAGTGCATGACGGAGGCAGCTGCTAGGAAGATTTTTGCTGATGCTGATGAAGTGAAGGTGGCTTTGAATAATTTTCTACTCGAAAGAAAAGGTTCGTAA

Protein sequence

MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKLERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGEREGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARASEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEEDNGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNENKGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINVPASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINPNLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADADEVKVALNNFLLERKGS

Homology

[Close]

BLAST of Csor.00g240940 vs. ExPASy Swiss-Prot
Match: Q9C7E7 (Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 2.6e-204
Identity = 472/866 (54.50%), Postives = 576/866 (66.51%), Query Frame = 0


Query: 44  DHSHRRRHHRSDRDSKLERSHE-SRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERER 103
           D     R HR DRD      H   R+   RRDR  D +    D  ++  R  D  DER+R
Sbjct: 2   DKERYSRSHRDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDH-YRSSRRGDREDERDR 61

Query: 104 SRDRVSSKRERSSEPRGEREGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRK 163
           ++DR    R RS E RGEREGS++R K    R  +   E E             S +KRK
Sbjct: 62  TKDR----RGRSVE-RGEREGSRDREKHHHERSHEGSKEKE-------------SRSKRK 121

Query: 164 ERGGSEDRFDGGEKRARASEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMS 223
           +R                             +E NGA   D K++ RFAD          
Sbjct: 122 DR-----------------------------EEENGAR--DGKKKSRFAD---------- 181

Query: 224 GRGKRERKRFGDRAKEEDNGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLH 283
           G G+R R RF D A E +   N D +V  G  +    S   G T+     SS   +    
Sbjct: 182 GNGER-RSRFEDVAIEVE---NKDAQVSEGSGATNPTS---GVTMGASTYSSIPSEASAA 241

Query: 284 PGHSHPIKVSSISTTNENKGVSIARSHEVHGKSSTDGTS-STAGK-SGNLSLDA---LAK 343
           P  +   KVSSISTT+ENK  S+ RSHEV GKSSTDG   STAGK S NL LD+    AK
Sbjct: 242 PSQTLLTKVSSISTTDENK-ASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAK 301

Query: 344 AKKALQMQKELAEKLKKIPLMKKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTH 403
           A+KALQ+QK LA++LK +PL+KK          A K   +  P   +   + T  V+T  
Sbjct: 302 ARKALQLQKGLADRLKNLPLLKK----------ATKPTSEGSPHTRVPPSTTTPAVSTG- 361

Query: 404 SAGVASSSSTLPAANALGGGINVPASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINL 463
                S +STLP     G G        SI + EAVKRAQELAA MGF QD EFAP+INL
Sbjct: 362 ----TSFASTLPHTGLAGFG--------SIANIEAVKRAQELAANMGFHQDREFAPVINL 421

Query: 464 FPGNVATDVAVSQKPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAF 523
           FPG   +D+ V+Q+P K PVLR+DALGREIDE GNV+++TKPS+LSTLKVNINK+KKDAF
Sbjct: 422 FPGQAPSDMTVAQRPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAF 481

Query: 524 QILKPELDVDPESNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEA 583
           QILKP+L+ D + NP++D RMGI++ K+LRPKRMSF FVEEGKW+++AE +K +S FGEA
Sbjct: 482 QILKPQLEADLKENPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEA 541

Query: 584 QAKERREKQAQLAKAKAAPDINPNLIEVSERVV-KEKTKEPIPEIEWWDVPLLHSGTYEH 643
           +AKE + KQAQLAKA    DINPNLIEVSERV  KEK KEPIP++EWWD  +L +G Y  
Sbjct: 542 KAKELKVKQAQLAKAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGE 601

Query: 644 VGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK 703
           + DG + +  ++ +K+T Y+EHPRPIEPPAE APPPPQPLKLTKKEQKKLRTQRRLAKEK
Sbjct: 602 ITDGTITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEK 661

Query: 704 DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR 763
           ++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR AAAEREQAH DRN AR
Sbjct: 662 EKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAAR 721

Query: 764 KLTPAERREKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICD 823
           KLTPAE+REKKERKLF+D  ++ETIVSVYKI  LSHP+ RFKV++NARENRL+GC+V+ D
Sbjct: 722 KLTPAEKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTD 774

Query: 824 NISVLVVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDD-KPVNKCSLVWQGSVAKS 883
            +SV+VVEG SK+IKRYGKLM+KRINW  + ++E  EDE ++    NKC LVWQGS+ K 
Sbjct: 782 EMSVVVVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKP 774

Query: 884 SFHKFSIQECMTEAAARKIFADADEV 902
           SFH+F + EC+TE+ A+K+F DA  V
Sbjct: 842 SFHRFHVHECVTESTAKKVFMDAGVV 774

[Close]

BLAST of Csor.00g240940 vs. ExPASy Swiss-Prot
Match: Q5ZJ85 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.2e-62
Identity = 208/611 (34.04%), Postives = 317/611 (51.88%), Query Frame = 0


Query: 312 HGKSSTDGT-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIP--------LM 371
           H KS++D           G    +S ++    K+ +   +E+ ++ + IP        ++
Sbjct: 78  HSKSNSDRNRKRELKDVFGDDSEVSKESSGVKKRRIPRFEEVEDEPEVIPGPPSESPGML 137

Query: 372 KKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGI 431
            K        ++  + EE+ K       LS  +  T       +S S  LP  N +    
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQ------LSFISPPTPQPKISSSSQSERLPIGNTVQPS- 197

Query: 432 NVPASLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVSQ 491
              A+       E  ++A EL AR+        G   +     L NL    +A      +
Sbjct: 198 --QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELK 257

Query: 492 KPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAF-QILKPELDVDPE 551
             +K   L LD  GR +D  G  + LT    + TLK NI   K++ F Q LK +   D E
Sbjct: 258 DQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDME 317

Query: 552 SNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQL 611
           SN ++D R+ I  T   R KR +F F E+GK+ K A+  +LR+K   AQ K+ + + +Q 
Sbjct: 318 SNTYFDLRVSI--TPAQRQKR-TFKFHEKGKFEKIAQ--RLRTK---AQLKKLQAEISQA 377

Query: 612 AKAKAAPDINPNLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRK 671
           A+ K     +  L  ++ +  KE  +  IPEIEWWD  ++ +G     G     D+    
Sbjct: 378 AR-KTGIHTSTKLALITPK--KELKEGEIPEIEWWDSYIIPNGLDLKGGTSSKKDEYF-- 437

Query: 672 DKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEP 731
             IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+ P
Sbjct: 438 -GITNLVEHPAQLNPPVDSDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLMPP 497

Query: 732 PKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKER 791
           P+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK +
Sbjct: 498 PEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKAKKIK 557

Query: 792 KLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKS 851
           KL ED  S    ++VY++ +LS+P  +FK++ NA +  L+G  V+  +++V+VVEGG K+
Sbjct: 558 KLKEDV-SQGVHIAVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGPKA 617

Query: 852 IKRYGKLMLKRINWAASV-----KEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQE 896
            K++ +LML RI W         ++++E DE   K  NKCSLVW+G+    SF +   ++
Sbjct: 618 QKKFKRLMLHRIKWDEQTSNTKGEDDDESDEESVKKTNKCSLVWEGTAKDRSFGEMKFKQ 662

[Close]

BLAST of Csor.00g240940 vs. ExPASy Swiss-Prot
Match: O43395 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1 SV=2)

HSP 1 Score: 238.4 bits (607), Expect = 3.1e-61
Identity = 201/613 (32.79%), Postives = 311/613 (50.73%), Query Frame = 0


Query: 312 HGKSSTDGT-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIP--------LM 371
           H KSS+D +         G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 372 KKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGI 431
            K        ++  + EE+ K       LS  +  T       +S    LP  N +    
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQ------LSFISPPTPQPKTPSSSQPERLPIGNTIQPS- 197

Query: 432 NVPASLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVSQ 491
              A+       E  ++A EL AR+        G   +     L NL    +A      +
Sbjct: 198 --QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELK 257

Query: 492 KPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAF-QILKPELDVDPE 551
             +K   L LD  GR +D  G  + LT    + TLK NI   K++ F Q LK +   D E
Sbjct: 258 DQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSEDME 317

Query: 552 SNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQL 611
           SN  +D R+ I  +   + +R +F F ++GK+ K A+ ++ +++  + QA      +   
Sbjct: 318 SNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQ 377

Query: 612 AKAKAAPDINPNLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRK 671
           A  K     +  L  ++ +  KE  +  IPEIEWWD  ++ +G           ++  R+
Sbjct: 378 AARKTGIHTSTRLALIAPK--KELKEGDIPEIEWWDSYIIPNGF------DLTEENPKRE 437

Query: 672 D--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLI 731
           D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+
Sbjct: 438 DYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLM 497

Query: 732 EPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKK 791
            PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK
Sbjct: 498 PPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKK 557

Query: 792 ERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGS 851
            +KL ED  S    +SVY++ +LS+P  +FK++ NA +  L+G  V+  +++V+VVEGG 
Sbjct: 558 IKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGP 617

Query: 852 KSIKRYGKLMLKRINWAASVK-----EEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSI 896
           K+ K++ +LML RI W          ++EE DE   K  NKC LVW+G+    SF +   
Sbjct: 618 KAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKF 661

[Close]

BLAST of Csor.00g240940 vs. ExPASy Swiss-Prot
Match: Q5R5F1 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 3.1e-61
Identity = 201/613 (32.79%), Postives = 311/613 (50.73%), Query Frame = 0


Query: 312 HGKSSTDGT-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIP--------LM 371
           H KSS+D +         G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRELKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 372 KKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGI 431
            K        ++  + EE+ K       LS  +  T       +S    LP  N +    
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQ------LSFISPPTPQPKTPSSSQPERLPIGNTIQPS- 197

Query: 432 NVPASLTSIPHFEAVKRAQELAARM--------GFRQDPEFAPLINLFPGNVATDVAVSQ 491
              A+       E  ++A EL AR+        G   +     L NL    +A      +
Sbjct: 198 --QAATFMNDAIEKARKAAELQARIQAQLALKPGLIGNANMVGLANLHAMGIAPPKVELK 257

Query: 492 KPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAF-QILKPELDVDPE 551
             +K   L LD  GR +D  G  + LT    + TLK NI   K++ F Q LK +   D E
Sbjct: 258 DQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFRQQLKEKPSEDME 317

Query: 552 SNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQL 611
           SN  +D R+ I  +   + +R +F F ++GK+ K A+ ++ +++  + QA      +   
Sbjct: 318 SNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------EISQ 377

Query: 612 AKAKAAPDINPNLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRK 671
           A  K     +  L  ++ +  KE  +  IPEIEWWD  ++ +G           ++  R+
Sbjct: 378 AARKTGIHTSTRLALIAPK--KELKEGDIPEIEWWDSYIIPNGF------DLTEENPKRE 437

Query: 672 D--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLI 731
           D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R GL+
Sbjct: 438 DYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRLGLM 497

Query: 732 EPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKK 791
            PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+ KK
Sbjct: 498 PPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRKVKK 557

Query: 792 ERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGS 851
            +KL ED  S    +SVY++ +LS+P  +FK++ NA +  L+G  V+  +++V+VVEGG 
Sbjct: 558 IKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVEGGP 617

Query: 852 KSIKRYGKLMLKRINWAASVK-----EEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSI 896
           K+ K++ +LML RI W          ++EE DE   K  NKC LVW+G+    SF +   
Sbjct: 618 KAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGEMKF 661

[Close]

BLAST of Csor.00g240940 vs. ExPASy Swiss-Prot
Match: Q2KIA6 (U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 9.2e-61
Identity = 199/616 (32.31%), Postives = 315/616 (51.14%), Query Frame = 0


Query: 312 HGKSSTDGT-----SSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIP--------LM 371
           H KSS+D +         G    +S ++    K+ +   +E+ E+ + IP        ++
Sbjct: 78  HSKSSSDRSRKRDLKEVFGDDSEISKESSGVKKRRIPRFEEVEEEPEVIPGPPSESPGML 137

Query: 372 KKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGI 431
            K        ++  + EE+ K       LS  +  T       +S    LP  N +    
Sbjct: 138 TKLQIKQMMEAATRQIEERKKQ------LSFISPPTPQPKTPSSSQPERLPIGNTI---- 197

Query: 432 NVPASLTSIPHFEAVKRAQ-----------ELAARMGFRQDPEFAPLINLFPGNVATDVA 491
             P+   +  + +A+++A+           +LA + G   +     L NL    +A    
Sbjct: 198 -QPSQAATFMN-DAIEKARKAAELQASIQAQLALKPGLIGNANMVGLANLHAMGIAPPKV 257

Query: 492 VSQKPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAF-QILKPELDV 551
             +  +K   L LD  GR +D  G  + LT    + TLK NI   K++ F Q LK +   
Sbjct: 258 ELKDQTKPTPLILDEQGRTVDATGKEIELT--HRMPTLKANIRAVKREQFKQQLKEKPSE 317

Query: 552 DPESNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQ 611
           D ESN  +D R+ I  +   + +R +F F ++GK+ K A+ ++ +++  + QA      +
Sbjct: 318 DMESNTFFDPRVSIAPS---QRQRRTFKFHDKGKFEKIAQRLRTKAQLEKLQA------E 377

Query: 612 AQLAKAKAAPDINPNLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDK 671
              A  K     +  L  ++ +  KE  +  IPEIEWWD  ++ +G           ++ 
Sbjct: 378 ISQAARKTGIHTSTRLALIAPK--KELKEGDIPEIEWWDSYIIPNGF------DLTEENP 437

Query: 672 IRKD--KITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQ 731
            R+D   IT  VEHP  + PP +   P    + LTKKEQKKLR Q R   +K+ QE +R 
Sbjct: 438 KREDYFGITNLVEHPAQLNPPVDNDTPVTLGVYLTKKEQKKLRRQTRREAQKELQEKVRL 497

Query: 732 GLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERR 791
           GL+ PP+PKV++SNLM+VLG+EA QDPTK+E  +RA  A+R++AH + N ARKLT  +R+
Sbjct: 498 GLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLTAEQRK 557

Query: 792 EKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVE 851
            KK +KL ED  S    +SVY++ +LS+P  +FK++ NA +  L+G  V+  +++V+VVE
Sbjct: 558 VKKIKKLKEDI-SQGVHISVYRVRNLSNPAKKFKIEANAGQLYLTGVVVLHKDVNVVVVE 617

Query: 852 GGSKSIKRYGKLMLKRINWAASVK-----EEEEEDENDDKPVNKCSLVWQGSVAKSSFHK 896
           GG K+ K++ +LML RI W          ++EE DE   K  NKC LVW+G+    SF +
Sbjct: 618 GGPKAQKKFKRLMLHRIKWDEQTSNTKGDDDEESDEEAVKKTNKCVLVWEGTAKDRSFGE 661

[Close]

BLAST of Csor.00g240940 vs. NCBI nr
Match: KAG6600086.1 (Protein RDM16, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1676 bits (4341), Expect = 0.0
Identity = 915/915 (100.00%), Postives = 915/915 (100.00%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
Sbjct: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
Sbjct: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
Sbjct: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240

Query: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300
           NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN
Sbjct: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300

Query: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360
           KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
Sbjct: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360

Query: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420
           DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV
Sbjct: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420

Query: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480
           PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
Sbjct: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480

Query: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540
           DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
Sbjct: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540

Query: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600
           NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
Sbjct: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600

Query: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660
           NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
Sbjct: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660

Query: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720
           PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
Sbjct: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720

Query: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780
           KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
Sbjct: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780

Query: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840
           IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
Sbjct: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840

Query: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADADE 900
           INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADADE
Sbjct: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADADE 900

Query: 901 VKVALNNFLLERKGS 915
           VKVALNNFLLERKGS
Sbjct: 901 VKVALNNFLLERKGS 915

[Close]

BLAST of Csor.00g240940 vs. NCBI nr
Match: KAG7030755.1 (Protein RDM16, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1638 bits (4242), Expect = 0.0
Identity = 895/898 (99.67%), Postives = 896/898 (99.78%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
Sbjct: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHESRDLKHRRDRSPDERESSQDRDF RERSYDVRDERERSRDRVSSKRERSSEPRG 
Sbjct: 61  ERSHESRDLKHRRDRSPDERESSQDRDFNRERSYDVRDERERSRDRVSSKRERSSEPRGA 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
Sbjct: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240

Query: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300
           +GGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN
Sbjct: 241 SGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300

Query: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360
           KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
Sbjct: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360

Query: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420
           DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV
Sbjct: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420

Query: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480
           PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
Sbjct: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480

Query: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540
           DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
Sbjct: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540

Query: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600
           NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
Sbjct: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600

Query: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660
           NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
Sbjct: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660

Query: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720
           PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
Sbjct: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720

Query: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780
           KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
Sbjct: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780

Query: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840
           IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
Sbjct: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840

Query: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898
           INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA
Sbjct: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898

[Close]

BLAST of Csor.00g240940 vs. NCBI nr
Match: XP_022941939.1 (protein RDM16-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1635 bits (4235), Expect = 0.0
Identity = 893/898 (99.44%), Postives = 896/898 (99.78%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRVTEKERSSKRSREER+GD KHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
Sbjct: 1   MDRVTEKERSSKRSREERDGDQKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
Sbjct: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLREVRREQSDDEYEREDSLGPIQNS RSSNKRKERGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSARSSNKRKERGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
Sbjct: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240

Query: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300
           NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN
Sbjct: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300

Query: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360
           KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
Sbjct: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360

Query: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420
           DGWSSSASSSAVKSEEKAKPAGGLLGL+ATTNVTTTHSAGVASSSSTLPAANALGGGINV
Sbjct: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLTATTNVTTTHSAGVASSSSTLPAANALGGGINV 420

Query: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480
           PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
Sbjct: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480

Query: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540
           DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
Sbjct: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540

Query: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600
           NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
Sbjct: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600

Query: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660
           NLIEVSERVVKE+TKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
Sbjct: 601 NLIEVSERVVKERTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660

Query: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720
           PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
Sbjct: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720

Query: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780
           KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
Sbjct: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780

Query: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840
           IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
Sbjct: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840

Query: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898
           INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA
Sbjct: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898

[Close]

BLAST of Csor.00g240940 vs. NCBI nr
Match: XP_022977165.1 (protein RDM16-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1622 bits (4199), Expect = 0.0
Identity = 888/898 (98.89%), Postives = 893/898 (99.44%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
Sbjct: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHESRDLKHRRDRSPD+ ESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
Sbjct: 61  ERSHESRDLKHRRDRSPDDCESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLREVRREQSDDEYEREDSLGPIQN VRSSNKRKERGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNFVRSSNKRKERGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
Sbjct: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240

Query: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300
           NGGNVDGKVQVGGTSDE+RSTGNGSTVEHIDMSSSVPQNLLHPG+SHPIKVSSISTTNEN
Sbjct: 241 NGGNVDGKVQVGGTSDERRSTGNGSTVEHIDMSSSVPQNLLHPGYSHPIKVSSISTTNEN 300

Query: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360
           KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
Sbjct: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360

Query: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420
           DGWSSSASSSAVKSEEKAK AGGLLGL+ATTNVTTT SAGVASS STLPAANALGGGINV
Sbjct: 361 DGWSSSASSSAVKSEEKAKLAGGLLGLTATTNVTTTLSAGVASSLSTLPAANALGGGINV 420

Query: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480
           PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
Sbjct: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480

Query: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540
           DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
Sbjct: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540

Query: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600
           NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
Sbjct: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600

Query: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660
           NLIEVSERVVK+KTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
Sbjct: 601 NLIEVSERVVKDKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660

Query: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720
           PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
Sbjct: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720

Query: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780
           KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
Sbjct: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780

Query: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840
           IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
Sbjct: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840

Query: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898
           INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA
Sbjct: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898

[Close]

BLAST of Csor.00g240940 vs. NCBI nr
Match: XP_023549546.1 (protein RDM16-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1590 bits (4116), Expect = 0.0
Identity = 878/898 (97.77%), Postives = 881/898 (98.11%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
Sbjct: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
Sbjct: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLREVRREQS+DEYERE SLGP QNSVRS NKRKERGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREVRREQSEDEYEREGSLGPNQNSVRS-NKRKERGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
            EDGK         EVN AEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
Sbjct: 181 LEDGK---------EVNVAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240

Query: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300
           NGGNVDGKVQVGGTSDEKRS GNGS+VEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN
Sbjct: 241 NGGNVDGKVQVGGTSDEKRSMGNGSSVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300

Query: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360
           KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
Sbjct: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360

Query: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420
           DGWSSSASSSAVKSEEKAKPAGGLLGL+ATTNVTTT SAGVASSSSTLPAANALGGGINV
Sbjct: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLTATTNVTTTLSAGVASSSSTLPAANALGGGINV 420

Query: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480
           PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
Sbjct: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480

Query: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540
           DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
Sbjct: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540

Query: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600
           NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
Sbjct: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600

Query: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660
           NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDG VADDKIRKDKITIYVEHPR
Sbjct: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGSVADDKIRKDKITIYVEHPR 660

Query: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720
           PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
Sbjct: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720

Query: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780
           KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
Sbjct: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780

Query: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840
           IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
Sbjct: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840

Query: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898
           INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA
Sbjct: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 888

[Close]

BLAST of Csor.00g240940 vs. ExPASy TrEMBL
Match: A0A6J1FPW9 (protein RDM16-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447152 PE=4 SV=1)

HSP 1 Score: 1635 bits (4235), Expect = 0.0
Identity = 893/898 (99.44%), Postives = 896/898 (99.78%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRVTEKERSSKRSREER+GD KHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
Sbjct: 1   MDRVTEKERSSKRSREERDGDQKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
Sbjct: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLREVRREQSDDEYEREDSLGPIQNS RSSNKRKERGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSARSSNKRKERGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
Sbjct: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240

Query: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300
           NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN
Sbjct: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300

Query: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360
           KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
Sbjct: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360

Query: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420
           DGWSSSASSSAVKSEEKAKPAGGLLGL+ATTNVTTTHSAGVASSSSTLPAANALGGGINV
Sbjct: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLTATTNVTTTHSAGVASSSSTLPAANALGGGINV 420

Query: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480
           PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
Sbjct: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480

Query: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540
           DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
Sbjct: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540

Query: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600
           NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
Sbjct: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600

Query: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660
           NLIEVSERVVKE+TKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
Sbjct: 601 NLIEVSERVVKERTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660

Query: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720
           PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
Sbjct: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720

Query: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780
           KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
Sbjct: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780

Query: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840
           IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
Sbjct: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840

Query: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898
           INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA
Sbjct: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898

[Close]

BLAST of Csor.00g240940 vs. ExPASy TrEMBL
Match: A0A6J1ILJ1 (protein RDM16-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477318 PE=4 SV=1)

HSP 1 Score: 1622 bits (4199), Expect = 0.0
Identity = 888/898 (98.89%), Postives = 893/898 (99.44%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL
Sbjct: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHESRDLKHRRDRSPD+ ESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE
Sbjct: 61  ERSHESRDLKHRRDRSPDDCESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLREVRREQSDDEYEREDSLGPIQN VRSSNKRKERGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNFVRSSNKRKERGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED
Sbjct: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240

Query: 241 NGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLHPGHSHPIKVSSISTTNEN 300
           NGGNVDGKVQVGGTSDE+RSTGNGSTVEHIDMSSSVPQNLLHPG+SHPIKVSSISTTNEN
Sbjct: 241 NGGNVDGKVQVGGTSDERRSTGNGSTVEHIDMSSSVPQNLLHPGYSHPIKVSSISTTNEN 300

Query: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360
           KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK
Sbjct: 301 KGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKALQMQKELAEKLKKIPLMKK 360

Query: 361 DGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVASSSSTLPAANALGGGINV 420
           DGWSSSASSSAVKSEEKAK AGGLLGL+ATTNVTTT SAGVASS STLPAANALGGGINV
Sbjct: 361 DGWSSSASSSAVKSEEKAKLAGGLLGLTATTNVTTTLSAGVASSLSTLPAANALGGGINV 420

Query: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480
           PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL
Sbjct: 421 PASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVLRL 480

Query: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540
           DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI
Sbjct: 481 DALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVDPESNPHYDERMGI 540

Query: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600
           NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP
Sbjct: 541 NKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQAQLAKAKAAPDINP 600

Query: 601 NLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660
           NLIEVSERVVK+KTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR
Sbjct: 601 NLIEVSERVVKDKTKEPIPEIEWWDVPLLHSGTYEHVGDGFVADDKIRKDKITIYVEHPR 660

Query: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720
           PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM
Sbjct: 661 PIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLM 720

Query: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780
           KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET
Sbjct: 721 KVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPAERREKKERKLFEDTNSLET 780

Query: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840
           IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR
Sbjct: 781 IVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVLVVEGGSKSIKRYGKLMLKR 840

Query: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898
           INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA
Sbjct: 841 INWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFSIQECMTEAAARKIFADA 898

[Close]

BLAST of Csor.00g240940 vs. ExPASy TrEMBL
Match: A0A6J1CB57 (protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1429 bits (3700), Expect = 0.0
Identity = 808/918 (88.02%), Postives = 843/918 (91.83%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRV+EKE+SSKRSR+ER+ D KHRSRDA+EKH SKDEKHRESDH HRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHE  D KHRRDRSPDE ESSQD DFKRERSYD+RDERERSRDR SSKRERS+EPR E
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLRE RREQSDDE ERE S  PIQN+VRS NKRK+RGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRS-NKRKDRGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SEDGKDLRR EDGKEVNGAEMD++KERRRFADGEKDDEAN+SGRG+RERKRF D   EED
Sbjct: 181 SEDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEED 240

Query: 241 NGGNVD-----------------GKVQVGGTSDEKRSTGNGSTVEHIDMSS-SVPQNLLH 300
           NGGNVD                 GK+Q+GGT+D   S GNGSTVE IDMSS SVPQ+L+H
Sbjct: 241 NGGNVDEKHANVNKHKSKGNVGDGKIQIGGTTDVS-SLGNGSTVEPIDMSSASVPQSLVH 300

Query: 301 PGHSHPIKVSSISTTNENKGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKAL 360
           P HS PIKVSSISTTNENKGVSI RSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKAL
Sbjct: 301 PSHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKAL 360

Query: 361 QMQKELAEKLKKIPLMKKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVA 420
           QMQKELAEKLKKIPLMKKDG SSSASSS VK E+K+KPAGG+LG S TTN+ TT SAGVA
Sbjct: 361 QMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVA 420

Query: 421 SSSSTLPAA-NALGGGINVPASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN 480
           SSSSTLPAA N  GGGINVPA LTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN
Sbjct: 421 SSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN 480

Query: 481 VATDVAVSQKPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILK 540
           +ATDVAV QKP KAPVLRLDALGREIDEQGNVVN+TKPS+LSTLKVNINKQKKDAFQILK
Sbjct: 481 IATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILK 540

Query: 541 PELDVDPESNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKE 600
           PEL+VDPESNPH+DERMGINKTKLLRPKRM+F FVEEGKWSKEAETIKLRSKFGEAQAKE
Sbjct: 541 PELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKE 600

Query: 601 RREKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKEPIPEIEWWDVPLLHSGTYEHVGDG 660
           RREKQAQLAKAKAAPDINPNLIEVSERV VKEKTKEPIPEIEWWDV LLHSGTY+ VGDG
Sbjct: 601 RREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDG 660

Query: 661 FVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQE 720
           FVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQE
Sbjct: 661 FVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQE 720

Query: 721 MIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTP 780
           MIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTP
Sbjct: 721 MIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTP 780

Query: 781 AERREKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISV 840
           AERREKKERKLF+D NSLE  VSVYKI DLSHPQARFKVDVNARENRL+GCAVICD ISV
Sbjct: 781 AERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISV 840

Query: 841 LVVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKF 898
           LVVEGGSKSIKRYGKLML+RINWAASVKEEEE DE+DDKPVNKCSLVWQGSVAKSSF+KF
Sbjct: 841 LVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKF 900

[Close]

BLAST of Csor.00g240940 vs. ExPASy TrEMBL
Match: A0A6J1CBF9 (protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=1)

HSP 1 Score: 1424 bits (3685), Expect = 0.0
Identity = 805/918 (87.69%), Postives = 840/918 (91.50%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRV+EKE+SSKRSR+ER+ D KHRSRDA+EKH SKDEKHRESDH HRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSRDERDRDQKHRSRDADEKHSSKDEKHRESDHHHRRRHHRSDRDSKR 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHE  D KHRRDRSPDE ESSQD DFKRERSYD+RDERERSRDR SSKRERS+EPR E
Sbjct: 61  ERSHEPLDHKHRRDRSPDEHESSQDHDFKRERSYDLRDERERSRDRDSSKRERSNEPRVE 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGSKERGKLRE RREQSDDE ERE S  PIQN+VRS NKRK+RGGSEDRFDGGEKRARA
Sbjct: 121 REGSKERGKLREARREQSDDECEREGSFEPIQNTVRS-NKRKDRGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SEDGKDLRR EDGKEVNGAEMD++KERRRFADGEKDDEAN+SGRG+RERKRF D   EED
Sbjct: 181 SEDGKDLRRIEDGKEVNGAEMDEKKERRRFADGEKDDEANLSGRGRRERKRFEDWVNEED 240

Query: 241 NGGNVD-----------------GKVQVGGTSDEKRSTGNGSTVEHIDMSS-SVPQNLLH 300
           NGGNVD                 GK+Q+GGT+D       GSTVE IDMSS SVPQ+L+H
Sbjct: 241 NGGNVDEKHANVNKHKSKGNVGDGKIQIGGTTD-------GSTVEPIDMSSASVPQSLVH 300

Query: 301 PGHSHPIKVSSISTTNENKGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKAL 360
           P HS PIKVSSISTTNENKGVSI RSHEVHGKSSTDG SSTAGKSGNLSLDALAKAKKAL
Sbjct: 301 PSHSIPIKVSSISTTNENKGVSITRSHEVHGKSSTDGPSSTAGKSGNLSLDALAKAKKAL 360

Query: 361 QMQKELAEKLKKIPLMKKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVA 420
           QMQKELAEKLKKIPLMKKDG SSSASSS VK E+K+KPAGG+LG S TTN+ TT SAGVA
Sbjct: 361 QMQKELAEKLKKIPLMKKDGGSSSASSSVVKLEDKSKPAGGVLGPSPTTNIGTTISAGVA 420

Query: 421 SSSSTLPAA-NALGGGINVPASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN 480
           SSSSTLPAA N  GGGINVPA LTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN
Sbjct: 421 SSSSTLPAATNTHGGGINVPAGLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN 480

Query: 481 VATDVAVSQKPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILK 540
           +ATDVAV QKP KAPVLRLDALGREIDEQGNVVN+TKPS+LSTLKVNINKQKKDAFQILK
Sbjct: 481 IATDVAVPQKPVKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILK 540

Query: 541 PELDVDPESNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKE 600
           PEL+VDPESNPH+DERMGINKTKLLRPKRM+F FVEEGKWSKEAETIKLRSKFGEAQAKE
Sbjct: 541 PELEVDPESNPHFDERMGINKTKLLRPKRMNFQFVEEGKWSKEAETIKLRSKFGEAQAKE 600

Query: 601 RREKQAQLAKAKAAPDINPNLIEVSERV-VKEKTKEPIPEIEWWDVPLLHSGTYEHVGDG 660
           RREKQAQLAKAKAAPDINPNLIEVSERV VKEKTKEPIPEIEWWDV LLHSGTY+ VGDG
Sbjct: 601 RREKQAQLAKAKAAPDINPNLIEVSERVIVKEKTKEPIPEIEWWDVSLLHSGTYDDVGDG 660

Query: 661 FVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQE 720
           FVA+DKIRKDKITIYVEHPRPIEPP EPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQE
Sbjct: 661 FVANDKIRKDKITIYVEHPRPIEPPVEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQE 720

Query: 721 MIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTP 780
           MIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTP
Sbjct: 721 MIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTP 780

Query: 781 AERREKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISV 840
           AERREKKERKLF+D NSLE  VSVYKI DLSHPQARFKVDVNARENRL+GCAVICD ISV
Sbjct: 781 AERREKKERKLFDDANSLENFVSVYKIYDLSHPQARFKVDVNARENRLTGCAVICDGISV 840

Query: 841 LVVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKF 898
           LVVEGGSKSIKRYGKLML+RINWAASVKEEEE DE+DDKPVNKCSLVWQGSVAKSSF+KF
Sbjct: 841 LVVEGGSKSIKRYGKLMLRRINWAASVKEEEEADESDDKPVNKCSLVWQGSVAKSSFNKF 900

[Close]

BLAST of Csor.00g240940 vs. ExPASy TrEMBL
Match: A0A0A0KLQ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1)

HSP 1 Score: 1398 bits (3618), Expect = 0.0
Identity = 790/917 (86.15%), Postives = 834/917 (90.95%), Query Frame = 0


Query: 1   MDRVTEKERSSKRSREERNGDHKHRSRDAEEKHFSKDEKHRESDHSHRRRHHRSDRDSKL 60
           MDRV+EKE+SSKRSREER+ DHKHRSRD E+KH SKDEKHRESD  HRRRHHRSDRDSK 
Sbjct: 1   MDRVSEKEKSSKRSREERDRDHKHRSRDTEDKHLSKDEKHRESDRHHRRRHHRSDRDSKR 60

Query: 61  ERSHESRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERERSRDRVSSKRERSSEPRGE 120
           ERSHE R+ KHRRD SPDERESSQDRDFKRERSY++R+ERERSRDR SSKRE+S+EPRG 
Sbjct: 61  ERSHEPREHKHRRDMSPDERESSQDRDFKRERSYELREERERSRDRDSSKREKSNEPRGL 120

Query: 121 REGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRKERGGSEDRFDGGEKRARA 180
           REGS+ERGKLREVRRE+SD+E+ERE S  PIQNSVR  NKRKERGGSEDRFDGGEKRARA
Sbjct: 121 REGSEERGKLREVRREESDNEHEREGSFEPIQNSVRP-NKRKERGGSEDRFDGGEKRARA 180

Query: 181 SEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMSGRGKRERKRFGDRAKEED 240
           SE G          EVNGAEMD++KERRRFADGEKD+ AN+SGRG+R+RKRF DR KEED
Sbjct: 181 SEVGN---------EVNGAEMDEKKERRRFADGEKDEGANLSGRGRRDRKRFEDRGKEED 240

Query: 241 NGGNVD-----------------GKVQVGGTSDEKRSTGNGSTVEHIDM-SSSVPQNLLH 300
           NGGNVD                 GKVQ GGT+DEKRS GNGS VE  DM S+SVPQNLLH
Sbjct: 241 NGGNVDEKHGKVNEYKSKGDVGDGKVQFGGTTDEKRSLGNGSMVEPTDMPSASVPQNLLH 300

Query: 301 PGHSHPIKVSSISTTNENKGVSIARSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKAL 360
           P HS PIKVSSISTTNEN+GVSI RSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKAL
Sbjct: 301 PSHSLPIKVSSISTTNENRGVSITRSHEVHGKSSTDGTSSTAGKSGNLSLDALAKAKKAL 360

Query: 361 QMQKELAEKLKKIPLMKKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTHSAGVA 420
           QMQKELAEKLK+IPLMKK G SSSA+SS VK EEKAKP  G+LG  +TTN  TT S GV 
Sbjct: 361 QMQKELAEKLKRIPLMKKVGGSSSANSSVVKLEEKAKPPSGILGPLSTTNDATTLSTGVV 420

Query: 421 SSSSTLP-AANALGGGINVPASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGN 480
           SSSSTLP AANAL GGINVPA LTSIPH EAVKRAQELAARMGFRQDPEFAPLINLFPGN
Sbjct: 421 SSSSTLPSAANALDGGINVPAGLTSIPHIEAVKRAQELAARMGFRQDPEFAPLINLFPGN 480

Query: 481 VATDVAVSQKPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILK 540
           VATDVAV QKP+KAPVLRLDALGREIDEQGNVVN+TKPS+LSTLKVNINKQKKDAFQILK
Sbjct: 481 VATDVAVPQKPTKAPVLRLDALGREIDEQGNVVNITKPSNLSTLKVNINKQKKDAFQILK 540

Query: 541 PELDVDPESNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKE 600
           PELDVDP+SNPH+DERMGINKTKLLRPKRMSF FVEEGKWSKEAET+KLRSKFGEAQAKE
Sbjct: 541 PELDVDPDSNPHFDERMGINKTKLLRPKRMSFQFVEEGKWSKEAETLKLRSKFGEAQAKE 600

Query: 601 RREKQAQLAKAKAAPDINPNLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVGDGF 660
           RREKQAQLAKAKAAPDINPNLIEVSERVVKEKTK+PIPEIEWWDVPLL SG Y+ +GDGF
Sbjct: 601 RREKQAQLAKAKAAPDINPNLIEVSERVVKEKTKDPIPEIEWWDVPLLQSGAYKDLGDGF 660

Query: 661 VADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720
           VADDK+RKDKITIYVEHPRPIEPPAEPA PPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM
Sbjct: 661 VADDKLRKDKITIYVEHPRPIEPPAEPALPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEM 720

Query: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780
           IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA
Sbjct: 721 IRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTPA 780

Query: 781 ERREKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICDNISVL 840
           ERREKKERKLF+D+NSLET VSVYKINDLSHPQARFKVDVNARENRL+GCAVICD ISVL
Sbjct: 781 ERREKKERKLFDDSNSLETFVSVYKINDLSHPQARFKVDVNARENRLTGCAVICDGISVL 840

Query: 841 VVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFHKFS 898
           VVEGGSKSIKRY KLML+RINWAASVKEEEEE ENDDKP+NKCSLVWQGSVAKSSF++FS
Sbjct: 841 VVEGGSKSIKRYAKLMLRRINWAASVKEEEEE-ENDDKPLNKCSLVWQGSVAKSSFNRFS 900

[Close]

BLAST of Csor.00g240940 vs. TAIR 10
Match: AT1G28060.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 713.8 bits (1841), Expect = 1.8e-205
Identity = 472/866 (54.50%), Postives = 576/866 (66.51%), Query Frame = 0


Query: 44  DHSHRRRHHRSDRDSKLERSHE-SRDLKHRRDRSPDERESSQDRDFKRERSYDVRDERER 103
           D     R HR DRD      H   R+   RRDR  D +    D  ++  R  D  DER+R
Sbjct: 2   DKERYSRSHRDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDH-YRSSRRGDREDERDR 61

Query: 104 SRDRVSSKRERSSEPRGEREGSKERGKLREVRREQSDDEYEREDSLGPIQNSVRSSNKRK 163
           ++DR    R RS E RGEREGS++R K    R  +   E E             S +KRK
Sbjct: 62  TKDR----RGRSVE-RGEREGSRDREKHHHERSHEGSKEKE-------------SRSKRK 121

Query: 164 ERGGSEDRFDGGEKRARASEDGKDLRRNEDGKEVNGAEMDDRKERRRFADGEKDDEANMS 223
           +R                             +E NGA   D K++ RFAD          
Sbjct: 122 DR-----------------------------EEENGAR--DGKKKSRFAD---------- 181

Query: 224 GRGKRERKRFGDRAKEEDNGGNVDGKVQVGGTSDEKRSTGNGSTVEHIDMSSSVPQNLLH 283
           G G+R R RF D A E +   N D +V  G  +    S   G T+     SS   +    
Sbjct: 182 GNGER-RSRFEDVAIEVE---NKDAQVSEGSGATNPTS---GVTMGASTYSSIPSEASAA 241

Query: 284 PGHSHPIKVSSISTTNENKGVSIARSHEVHGKSSTDGTS-STAGK-SGNLSLDA---LAK 343
           P  +   KVSSISTT+ENK  S+ RSHEV GKSSTDG   STAGK S NL LD+    AK
Sbjct: 242 PSQTLLTKVSSISTTDENK-ASVVRSHEVPGKSSTDGRPLSTAGKSSANLPLDSSALAAK 301

Query: 344 AKKALQMQKELAEKLKKIPLMKKDGWSSSASSSAVKSEEKAKPAGGLLGLSATTNVTTTH 403
           A+KALQ+QK LA++LK +PL+KK          A K   +  P   +   + T  V+T  
Sbjct: 302 ARKALQLQKGLADRLKNLPLLKK----------ATKPTSEGSPHTRVPPSTTTPAVSTG- 361

Query: 404 SAGVASSSSTLPAANALGGGINVPASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINL 463
                S +STLP     G G        SI + EAVKRAQELAA MGF QD EFAP+INL
Sbjct: 362 ----TSFASTLPHTGLAGFG--------SIANIEAVKRAQELAANMGFHQDREFAPVINL 421

Query: 464 FPGNVATDVAVSQKPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAF 523
           FPG   +D+ V+Q+P K PVLR+DALGREIDE GNV+++TKPS+LSTLKVNINK+KKDAF
Sbjct: 422 FPGQAPSDMTVAQRPEKPPVLRVDALGREIDEHGNVISVTKPSNLSTLKVNINKKKKDAF 481

Query: 524 QILKPELDVDPESNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEA 583
           QILKP+L+ D + NP++D RMGI++ K+LRPKRMSF FVEEGKW+++AE +K +S FGEA
Sbjct: 482 QILKPQLEADLKENPYFDTRMGIDEKKILRPKRMSFQFVEEGKWTRDAENLKFKSHFGEA 541

Query: 584 QAKERREKQAQLAKAKAAPDINPNLIEVSERVV-KEKTKEPIPEIEWWDVPLLHSGTYEH 643
           +AKE + KQAQLAKA    DINPNLIEVSERV  KEK KEPIP++EWWD  +L +G Y  
Sbjct: 542 KAKELKVKQAQLAKAN--DDINPNLIEVSERVPRKEKPKEPIPDVEWWDANVLTNGEYGE 601

Query: 644 VGDGFVADDKIRKDKITIYVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEK 703
           + DG + +  ++ +K+T Y+EHPRPIEPPAE APPPPQPLKLTKKEQKKLRTQRRLAKEK
Sbjct: 602 ITDGTITESHLKIEKLTHYIEHPRPIEPPAEAAPPPPQPLKLTKKEQKKLRTQRRLAKEK 661

Query: 704 DRQEMIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIAR 763
           ++QEMIRQGL+EPPK KVKMSNLMKVLGSEATQDPTKLEKEIR AAAEREQAH DRN AR
Sbjct: 662 EKQEMIRQGLLEPPKAKVKMSNLMKVLGSEATQDPTKLEKEIRTAAAEREQAHTDRNAAR 721

Query: 764 KLTPAERREKKERKLFEDTNSLETIVSVYKINDLSHPQARFKVDVNARENRLSGCAVICD 823
           KLTPAE+REKKERKLF+D  ++ETIVSVYKI  LSHP+ RFKV++NARENRL+GC+V+ D
Sbjct: 722 KLTPAEKREKKERKLFDDPTTVETIVSVYKIKKLSHPKTRFKVEMNARENRLTGCSVMTD 774

Query: 824 NISVLVVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDD-KPVNKCSLVWQGSVAKS 883
            +SV+VVEG SK+IKRYGKLM+KRINW  + ++E  EDE ++    NKC LVWQGS+ K 
Sbjct: 782 EMSVVVVEGKSKAIKRYGKLMMKRINWEEAERKEGNEDEEEEVNGGNKCWLVWQGSIGKP 774

Query: 884 SFHKFSIQECMTEAAARKIFADADEV 902
           SFH+F + EC+TE+ A+K+F DA  V
Sbjct: 842 SFHRFHVHECVTESTAKKVFMDAGVV 774

[Close]

BLAST of Csor.00g240940 vs. TAIR 10
Match: AT3G55930.1 (Pre-mRNA-splicing factor 3 )

HSP 1 Score: 314.7 bits (805), Expect = 2.5e-85
Identity = 202/440 (45.91%), Postives = 258/440 (58.64%), Query Frame = 0


Query: 468 VSQKPSKAPVLRLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQILKPELDVD 527
           ++ K +K  VLR+DALGREIDE GNV+++TKP + STL VNI                  
Sbjct: 88  LAHKQTKGFVLRVDALGREIDEHGNVISVTKPINHSTLMVNIR----------------- 147

Query: 528 PESNPHYDERMGINKTKLLRPKRMSFLFVEEGKWSKEAETIKLRSKFGEAQAKERREKQA 587
            ++ PH                                                      
Sbjct: 148 -DNVPH-----------------------------------------------------R 207

Query: 588 QLAKAKAAPDINPNLIEVSERVVKEKTKEPIPEIEWWDVPLLHSGTYEHVG--DGFVADD 647
           +L+K  +                           EWWD  +L   T   +      +  D
Sbjct: 208 KLSKILS---------------------------EWWDAKILTDDTINELSCDPNILIMD 267

Query: 648 KIRKDKITI-----YVEHPRPIEPPAEPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQE 707
            I ++ + +     ++EHP PIEPPAE A PPPQPLK+TK+E+KKLRT RR+AKE +++E
Sbjct: 268 TITENHLNMKVFNCHIEHPFPIEPPAEAASPPPQPLKMTKEERKKLRTLRRVAKEMEKRE 327

Query: 708 MIRQGLIEPPKPKVKMSNLMKVLGSEATQDPTKLEKEIRAAAAEREQAHIDRNIARKLTP 767
           MI QG +EP K KVKMSNLMKV  SEATQ+PTKLEKEIR  AAEREQAH+DRN+ARKLTP
Sbjct: 328 MISQGRVEPQKSKVKMSNLMKVRASEATQNPTKLEKEIRTEAAEREQAHMDRNVARKLTP 387

Query: 768 AERREKKERKLFED-TNSLETIVSVYKIN-DLSHPQARFKVDVNARENRLSGCAVICDNI 827
           AE+REKKERKLF D T  +ETIVSVYKIN  LS P+ RFKV +NA++N L+G +V+ D +
Sbjct: 388 AEKREKKERKLFGDPTTVVETIVSVYKINKKLSDPKTRFKVRMNAKQNILTGFSVMMDGM 425

Query: 828 SVLVVEGGSKSIKRYGKLMLKRINWAASVKEEEEEDENDDKPVNKCSLVWQGSVAKSSFH 887
           SV+VVEG  K+I RY KLMLKRINW  + K+E+EE+       NKC LVWQGSV K SFH
Sbjct: 448 SVVVVEGKRKAINRYEKLMLKRINWEEAEKKEDEEENGG----NKCCLVWQGSVEKPSFH 425

Query: 888 KFSIQECMTEAAARKIFADA 899
           +F +QEC+T++ A+K+F DA
Sbjct: 508 RFHVQECLTKSDAKKVFNDA 425

[Close]

BLAST of Csor.00g240940 vs. TAIR 10
Match: AT3G56790.1 (RNA splicing factor-related )

HSP 1 Score: 79.0 bits (193), Expect = 2.3e-14
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0


Query: 672 PPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLIEPPKPKVKMSNLMKVLGSE-ATQD 731
           PPQP KLTKKE+KKL+T RR+AKEK++Q+MIRQ L EP K KVK+SNLMKVL SE ATQD
Sbjct: 144 PPQPFKLTKKEEKKLQTLRRVAKEKEKQKMIRQALFEPQKSKVKLSNLMKVLASELATQD 203

HSP 2 Score: 63.2 bits (152), Expect = 1.3e-09
Identity = 46/105 (43.81%), Postives = 54/105 (51.43%), Query Frame = 0


Query: 419 NVPASLTSIPHFEAVKRAQELAARMGFRQDPEFAPLINLFPGNVATDVAVSQKPSKAPVL 478
           ++ +  TS    EAVKR QEL                       A D AV+ K +K   L
Sbjct: 69  SIASDTTSSQILEAVKRFQEL-----------------------AIDTAVAHKQTKGFFL 128

Query: 479 RLDALGREIDEQGNVVNLTKPSDLSTLKVNINKQKKDAFQ-ILKP 523
           R+D LGREIDE G+V+N      LSTL VN NK KKD FQ ILKP
Sbjct: 129 RVDVLGREIDEYGHVIN------LSTLMVNNNKHKKDVFQNILKP 144

The following BLAST results are available for this feature:

BLAST of Csor.00g240940 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C7E7	2.6e-204	54.50	Protein RDM16 OS=Arabidopsis thaliana OX=3702 GN=RDM16 PE=2 SV=1	[more]
Q5ZJ85	2.2e-62	34.04	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Gallus gallus OX=9031 GN=PRPF3 PE=...	[more]
O43395	3.1e-61	32.79	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Homo sapiens OX=9606 GN=PRPF3 PE=1...	[more]
Q5R5F1	3.1e-61	32.79	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Pongo abelii OX=9601 GN=PRPF3 PE=2...	[more]
Q2KIA6	9.2e-61	32.31	U4/U6 small nuclear ribonucleoprotein Prp3 OS=Bos taurus OX=9913 GN=PRPF3 PE=2 S...	[more]

BLAST of Csor.00g240940 vs. NCBI nr


Match Name	Identity	Description
KAG6600086.1	100.00	Protein RDM16, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7030755.1	99.67	Protein RDM16, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022941939.1	99.44	protein RDM16-like isoform X1 [Cucurbita moschata]	[more]
XP_022977165.1	98.89	protein RDM16-like isoform X1 [Cucurbita maxima]	[more]
XP_023549546.1	97.77	protein RDM16-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g240940 vs. ExPASy TrEMBL


Match Name	Identity	Description
A0A6J1FPW9	99.44	protein RDM16-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447152 PE=4...	[more]
A0A6J1ILJ1	98.89	protein RDM16-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477318 PE=4 S...	[more]
A0A6J1CB57	88.02	protein RDM16 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A6J1CBF9	87.69	protein RDM16 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111010059 PE=4 SV=...	[more]
A0A0A0KLQ4	86.15	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G177130 PE=4 SV=1	[more]

BLAST of Csor.00g240940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G28060.1	1.8e-205	54.50	Pre-mRNA-splicing factor 3	[more]
AT3G55930.1	2.5e-85	45.91	Pre-mRNA-splicing factor 3	[more]
AT3G56790.1	2.3e-14	75.00	RNA splicing factor-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 332..355
None	No IPR available	COILS	Coil	Coil	coord: 676..698
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..244
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 660..684
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..328
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 289..304
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..383
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 661..677
None	No IPR available	PANTHER	PTHR14212:SF2	SUBFAMILY NOT NAMED	coord: 37..899
IPR010541	Domain of unknown function DUF1115	PFAM	PF06544	DUF1115	coord: 784..898 e-value: 3.2E-36 score: 124.6
IPR013881	Pre-mRNA-splicing factor 3	PFAM	PF08572	PRP3	coord: 531..759 e-value: 1.3E-61 score: 208.1
IPR027104	U4/U6 small nuclear ribonucleoprotein Prp3	PANTHER	PTHR14212	U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED	coord: 37..899

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g240940.m01	Csor.00g240940.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex