Csor.00g240430 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGTGGCCACATGAACGTGCATCGAAGAGACCGTGCTCGTCTCCAAAACAATCCCAACCGTTCATTCCTCATCAAACCAACTCCCACCCTCGATCTTCAAGCTAACCCTTTTTGTCCCAAAAACAGCAGATCAGATTCTGGGTCGTGTCTCAAACGAGCCAAAGTTTGTGTCTCTGAAGAGCAGCTTGACCTTGAGCTCAAGCTATAG ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGTGGCCACATGAACGTGCATCGAAGAGACCGTGCTCGTCTCCAAAACAATCCCAACCGTTCATTCCTCATCAAACCAACTCCCACCCTCGATCTTCAAGCTAACCCTTTTTGTCCCAAAAACAGCAGATCAGATTCTGGGTCGTGTCTCAAACGAGCCAAAGTTTGTGTCTCTGAAGAGCAGCTTGACCTTGAGCTCAAGCTATAG ATGGCAGAAACTCATCATCTATGGAGACAAATCCTCAACTACTCCAACACCTTCAAACCGTCGCCATCCTGGGAGGAGAAGGCCTTCGCCGAGGACACCGCCGCCGCCGTCTGGCCGCCGAGGTCCTACTCCTGCAACTTCTGTATGAGACAATTCCGGTCAGCTCAGGCCCTCGGTGGCCACATGAACGTGCATCGAAGAGACCGTGCTCGTCTCCAAAACAATCCCAACCGTTCATTCCTCATCAAACCAACTCCCACCCTCGATCTTCAAGCTAACCCTTTTTGTCCCAAAAACAGCAGATCAGATTCTGGGTCGTGTCTCAAACGAGCCAAAGTTTGTGTCTCTGAAGAGCAGCTTGACCTTGAGCTCAAGCTATAG MAETHHLWRQILNYSNTFKPSPSWEEKAFAEDTAAAVWPPRSYSCNFCMRQFRSAQALGGHMNVHRRDRARLQNNPNRSFLIKPTPTLDLQANPFCPKNSRSDSGSCLKRAKVCVSEEQLDLELKL Homology
BLAST of Csor.00g240430 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.1e-17 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2) HSP 1 Score: 79.0 bits (193), Expect = 4.4e-14 Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 2.8e-13 Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 1.1e-12 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.0e-07 Identity = 24/33 (72.73%), Postives = 30/33 (90.91%), Query Frame = 0
BLAST of Csor.00g240430 vs. NCBI nr
Match: KAG6600035.1 (Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030703.1 Zinc finger protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 268 bits (686), Expect = 6.85e-91 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
BLAST of Csor.00g240430 vs. NCBI nr
Match: XP_022988302.1 (zinc finger protein 10-like [Cucurbita maxima]) HSP 1 Score: 265 bits (677), Expect = 1.62e-89 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Csor.00g240430 vs. NCBI nr
Match: XP_023542190.1 (zinc finger protein 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 264 bits (674), Expect = 4.64e-89 Identity = 123/126 (97.62%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Csor.00g240430 vs. NCBI nr
Match: XP_008461701.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo] >KAA0050359.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa] >TYK03572.1 transcriptional regulator SUPERMAN-like [Cucumis melo var. makuwa]) HSP 1 Score: 150 bits (379), Expect = 4.41e-44 Identity = 86/135 (63.70%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of Csor.00g240430 vs. NCBI nr
Match: XP_004151402.2 (zinc finger protein 11 [Cucumis sativus] >KGN50575.1 hypothetical protein Csa_021472 [Cucumis sativus]) HSP 1 Score: 148 bits (373), Expect = 4.08e-43 Identity = 86/139 (61.87%), Postives = 96/139 (69.06%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy TrEMBL
Match: A0A6J1JCP1 (zinc finger protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111485589 PE=4 SV=1) HSP 1 Score: 265 bits (677), Expect = 7.83e-90 Identity = 124/126 (98.41%), Postives = 125/126 (99.21%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy TrEMBL
Match: A0A5A7UA35 (Transcriptional regulator SUPERMAN-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold293G00710 PE=4 SV=1) HSP 1 Score: 150 bits (379), Expect = 2.13e-44 Identity = 86/135 (63.70%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy TrEMBL
Match: A0A1S3CGM6 (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103500239 PE=4 SV=1) HSP 1 Score: 150 bits (379), Expect = 2.13e-44 Identity = 86/135 (63.70%), Postives = 96/135 (71.11%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy TrEMBL
Match: A0A0A0KLQ3 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G183770 PE=4 SV=1) HSP 1 Score: 148 bits (373), Expect = 1.98e-43 Identity = 86/139 (61.87%), Postives = 96/139 (69.06%), Query Frame = 0
BLAST of Csor.00g240430 vs. ExPASy TrEMBL
Match: A0A6J1CVW0 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111015051 PE=4 SV=1) HSP 1 Score: 109 bits (272), Expect = 7.57e-27 Identity = 54/85 (63.53%), Postives = 64/85 (75.29%), Query Frame = 0
BLAST of Csor.00g240430 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 ) HSP 1 Score: 90.9 bits (224), Expect = 7.9e-19 Identity = 46/83 (55.42%), Postives = 60/83 (72.29%), Query Frame = 0
BLAST of Csor.00g240430 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 84.7 bits (208), Expect = 5.7e-17 Identity = 38/52 (73.08%), Postives = 42/52 (80.77%), Query Frame = 0
BLAST of Csor.00g240430 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 79.0 bits (193), Expect = 3.1e-15 Identity = 50/103 (48.54%), Postives = 60/103 (58.25%), Query Frame = 0
BLAST of Csor.00g240430 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein ) HSP 1 Score: 76.3 bits (186), Expect = 2.0e-14 Identity = 34/49 (69.39%), Postives = 40/49 (81.63%), Query Frame = 0
BLAST of Csor.00g240430 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 ) HSP 1 Score: 74.3 bits (181), Expect = 7.7e-14 Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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