Csor.00g239630 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g239630
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ribosome biogenesis protein NOP53
Location	Csor_Chr04: 560722 .. 563674 (+)
RNA-Seq Expression	Csor.00g239630
Synteny	Csor.00g239630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAAGAAATCAAAGGGATCTAGGAAGGGGAAGAAGGCCTGGAGAGCCAATATAAGCTCTGCGGACATTGAGGATTTCTTAGAGAAGTCTACAAAGGACGCTCTCTCCGGCGGTTCTCTTTCCGCCGTTCCCAGTGATTCTCTTTTCGTCGTCGATAAGTCTCGAGGTACTGCTGGTTATTATACTCTTATTTCTGTTACCTTGAAATCTTGCCTATTTCACTTTGCCGGTTTCTGTTCTTGTTCTAGCATTTGGGTTCTGTCTTTTTGGTTGATTTTGATATTTCTTGCATTGATTCTCTAATGGTTATTTTCGCGTTTGATTCATGCTTCCCACCAAATTGTAGTGTGGTCTGTTTTGTGTAAAGAAAACTTATTGTTTTTCACTGAGTTTGAAGTTGGTGTTTGAACCGTAGAGTGAAAATTCTGACATTGGGTTATGAGGACGTTAACTGAAGTATCCGCAAAAGCTATTAAAAGTCTGTGAAATGCGTCGGACGCTGAATCAAACTTCTGCAGCAAAGCTCTTCTTATTTTCACCATTATATTATAAAAGAATACTTCAGATAGAGAATTTTGAGTAGTTCTTCTTACATTACGATACTTATGGTTGCCATTTGAACTAAATAGCACTATGTTCCATCTTTGTGCTCAAAATCTGTAAAAGAAGGTTGGTCGAGAAAACACGTCTGTATTTACTTAGGAAGTACTGATTCGTTAACATTAACAATAGTTGTAAACAGACAAAGGATTTGTCATTGTTTGAACTGATTATTATTTGTTTTCTCTGTTTTACCGTGTAGATCTTTCTGTGAAGCGGAAAATTGAAAAGAAACGAGAAAAGGTACTTTACTGTGACAGCATATTAACAAAGAATCCATTTGTCCAAGCTGTGCCTTCTTCGATTAATAAGAAACCCAAGAAAAAATTGGAAGAGGGTTCTAAAGCTAAAGAAACCTCTGAAGATGGTGCTAAGGTTGGCATGTTTGACATATGGAGTGATAAAGGTGCTTATTTTCCCCCCTCTCATTACTCTTGTGATCTGTATCGCACTTTTGTTCTCAACAACCATTTTAATGTGAAAAAATTAATCAAACACTACATCACTTGTTTTTGCTGTTCCTGTAGGTGAAAATAAAAGCAAGAAAAGTAAGGTACGGTACCCTAACTGGTTAATTAATAACAAGTCTTATATTTTTTGTATATCATGTAATATTGATTTCTAAAGATATTAGATTCTTATCCTTATGCAAAAAAGGGCAGAAAGAAGAAAAGACGAGGGGAATAAAAAAGAAATAATATAAAAAAAAAGGAAAAAAAAATGTGGATTTTGTTGCAGGAAGATAACAAGTAATGTTAATGTAATCTTGGACAGAAATCATCGAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCTCAGGATGTTCGTTCAATCCTCCACATGAGAGTCATCAGGTAAGATGTAATAATTCCAACCTTTGTTTCTTGTAAAAGAAGTTGAAGAATGTTCTGGTAACCTTTCGATAATTGATGTTTAAAGTGTGTTTCTTCCCCCCCTCAAAGTCGTTATCATATCCTATTTCCCTTAAACTTCCCATTTTACCGATCCAGGATGTACTTGCACGTGCTGTTGCAGAAGAAATGCAGAAAGTATACCGAAATGAGCTGGGGCCTGAGCCAGTTCCCTTAACAGTCACAGGAGAAGCTATTAGTGAAGAAGATGTGAGTATTTTGATCCATAAACTTGAATTGTATTGGAATACTCTCCTCAATATAAAATATACTTTTTACTTTCAGTAACTTTTCTTGATTTAAGAGATTACATTTAATTGGTGTTTTGCAGATGTTATTTTTGGATGCTGATAATGATACTGATGACGAAACCAATTTGGACGAAATGGATGAGGATGATATTGAAAAAAGGTTTCATTTATTGGAGAATAATTGTTTTAAAGCTTGCAGATTTTTCAAGTAGTTTGGATCACTTTTCTTGGCCCTCTTATGCTAGTCTGTCCTTTAGGTGTACATAATTGATTTTCTGTATGGATCTATTAGAACTTAAAACCTGTTGTGCTTTTCCAACAGCAGGGCGATCTTTTTCGCAATTTTGAAACAATGTATTTCAAGTGTTCTTCTGTTCTTTTTCTAAAAAAGCTAAGCTTGTTACACAGGCCTTTGAGGACAAAAAGGGTGACTCGAGTTGAGTTGAATAAGAGAGCTAGAAATAAAGAACAGCGCAGAAAGGAAGCCGAATCGAAGAAGTTGAAAGGAATTTCCAAAGAGATTGACAGGTATACATCAGTATCTTTTCTCCTCCATAGTTATCAGATGTCCAATGTAACTGAACTTTCGCTCGTGTATGAAGCTTGCCGGATATCCTTCAAGAAACAGCTAAAGAGGACGAGGAGAGACAAAACAGACTTATCCGACGAACAATAGCGAAACAGGAGAGATTAAAGTCATGTCCACCTCGATTGGGGAGGCACAAGTACGTCCTATTACACAACTCTTAAATAGTTCTGTTTAGTACTAAATTGAAAGATTAGTAATCAATCGATTTGCTGCATTTTGAATTGCACGGTGTTACTTTCAGGTTCGAGCCTGCTCCGGTTCAAGTTCTCCTATCCGAGGAAATAACTGGATCACTCCGTAAGCTGAAGGTGCAGTAATTAATTTCCATGTTCATCATTCCTGAATATACTCCTTTCTATCAAAGTAGTTGTGTTCTGAAATTTAGATGCATTGTGGTTGGTTATTTTGTATAAATGCAGGGCTGTTGCACCCTTGTGAAGGACAGGTTCAAAAGCTTAGAGAAAAGAGGAATAATTGCCCCTACTGCCAAGAAGAGCAGAAGGTTAGTAATTAGTTCTTTTCACAATCTGCTCCTTTTATGATGAAACCTTCATAACGTTCTTACGAAATTGCACTTCTTTTCGCCAGGAAATAG

mRNA sequence

ATGGGAAAGAAATCAAAGGGATCTAGGAAGGGGAAGAAGGCCTGGAGAGCCAATATAAGCTCTGCGGACATTGAGGATTTCTTAGAGAAGTCTACAAAGGACGCTCTCTCCGGCGGTTCTCTTTCCGCCGTTCCCAGTGATTCTCTTTTCGTCGTCGATAAGTCTCGAGATCTTTCTGTGAAGCGGAAAATTGAAAAGAAACGAGAAAAGGTACTTTACTGTGACAGCATATTAACAAAGAATCCATTTGTCCAAGCTGTGCCTTCTTCGATTAATAAGAAACCCAAGAAAAAATTGGAAGAGGGTTCTAAAGCTAAAGAAACCTCTGAAGATGGTGCTAAGGTTGGCATGTTTGACATATGGAGTGATAAAGGTGAAAATAAAAGCAAGAAAAGTAAGAAATCATCGAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCTCAGGATGTTCGTTCAATCCTCCACATGAGAGTCATCAGGATGTACTTGCACGTGCTGTTGCAGAAGAAATGCAGAAAGTATACCGAAATGAGCTGGGGCCTGAGCCAGTTCCCTTAACAGTCACAGGAGAAGCTATTAGTGAAGAAGATATGTTATTTTTGGATGCTGATAATGATACTGATGACGAAACCAATTTGGACGAAATGGATGAGGATGATATTGAAAAAAGGCCTTTGAGGACAAAAAGGGTGACTCGAGTTGAGTTGAATAAGAGAGCTAGAAATAAAGAACAGCGCAGAAAGGAAGCCGAATCGAAGAAGTTGAAAGGAATTTCCAAAGAGATTGACAGCTTGCCGGATATCCTTCAAGAAACAGCTAAAGAGGACGAGGAGAGACAAAACAGACTTATCCGACGAACAATAGCGAAACAGGAGAGATTAAAGTCATGTCCACCTCGATTGGGGAGGCACAAGTTCGAGCCTGCTCCGGTTCAAGTTCTCCTATCCGAGGAAATAACTGGATCACTCCGTAAGCTGAAGGGCTGTTGCACCCTTGTGAAGGACAGGTTCAAAAGCTTAGAGAAAAGAGGAATAATTGCCCCTACTGCCAAGAAGAGCAGAAGGAAATAG

Coding sequence (CDS)

ATGGGAAAGAAATCAAAGGGATCTAGGAAGGGGAAGAAGGCCTGGAGAGCCAATATAAGCTCTGCGGACATTGAGGATTTCTTAGAGAAGTCTACAAAGGACGCTCTCTCCGGCGGTTCTCTTTCCGCCGTTCCCAGTGATTCTCTTTTCGTCGTCGATAAGTCTCGAGATCTTTCTGTGAAGCGGAAAATTGAAAAGAAACGAGAAAAGGTACTTTACTGTGACAGCATATTAACAAAGAATCCATTTGTCCAAGCTGTGCCTTCTTCGATTAATAAGAAACCCAAGAAAAAATTGGAAGAGGGTTCTAAAGCTAAAGAAACCTCTGAAGATGGTGCTAAGGTTGGCATGTTTGACATATGGAGTGATAAAGGTGAAAATAAAAGCAAGAAAAGTAAGAAATCATCGAAGCCATCCATTATTCCAGCAGTAGAAGTTGAGCCCTCAGGATGTTCGTTCAATCCTCCACATGAGAGTCATCAGGATGTACTTGCACGTGCTGTTGCAGAAGAAATGCAGAAAGTATACCGAAATGAGCTGGGGCCTGAGCCAGTTCCCTTAACAGTCACAGGAGAAGCTATTAGTGAAGAAGATATGTTATTTTTGGATGCTGATAATGATACTGATGACGAAACCAATTTGGACGAAATGGATGAGGATGATATTGAAAAAAGGCCTTTGAGGACAAAAAGGGTGACTCGAGTTGAGTTGAATAAGAGAGCTAGAAATAAAGAACAGCGCAGAAAGGAAGCCGAATCGAAGAAGTTGAAAGGAATTTCCAAAGAGATTGACAGCTTGCCGGATATCCTTCAAGAAACAGCTAAAGAGGACGAGGAGAGACAAAACAGACTTATCCGACGAACAATAGCGAAACAGGAGAGATTAAAGTCATGTCCACCTCGATTGGGGAGGCACAAGTTCGAGCCTGCTCCGGTTCAAGTTCTCCTATCCGAGGAAATAACTGGATCACTCCGTAAGCTGAAGGGCTGTTGCACCCTTGTGAAGGACAGGTTCAAAAGCTTAGAGAAAAGAGGAATAATTGCCCCTACTGCCAAGAAGAGCAGAAGGAAATAG

Protein sequence

MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDIWSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNELGPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPPRLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK

Homology

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BLAST of Csor.00g239630 vs. ExPASy Swiss-Prot
Match: O22892 (Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana OX=3702 GN=At2g40430 PE=1 SV=2)

HSP 1 Score: 349.0 bits (894), Expect = 6.4e-95
Identity = 225/442 (50.90%), Postives = 274/442 (61.99%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGK+SK SRKGKKAWRANISS DIEDF EK+T+DALSGG+LSA PS+ LF VDKS DL V
Sbjct: 1   MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKK----LEEGSKAKETSEDGAKVG 120
           KRKIEK RE+VL  DSIL KNPFVQ VPSS  K  K K    +E+ +  +     G    
Sbjct: 61  KRKIEKHRERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSV 120

Query: 121 MFDIWSD--KGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQK 180
           M D+W D  KGE++S   K    PSII AVE+E  GCS+NP  ESHQD+LA AVA+EMQK
Sbjct: 121 MADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQK 180

Query: 181 VYRNELGPEPVPLTVTGEAISEEDMLFLDADNDTDDE----------------------- 240
           VY+ ELGP PVPLT+ G+ +SE++  FLD DN ++ E                       
Sbjct: 181 VYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQ 240

Query: 241 ------TNLDEMDE---------------------DDIEKR------------------- 300
                 TNL ++++                     DDI++                    
Sbjct: 241 LKPSSNTNLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDV 300

Query: 301 -----------PLRTKRVTRVELNKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETA 357
                        +TKRVTRVELNKR R K  R+KE + K  + I  EIDSLP+IL+E A
Sbjct: 301 KIEVSEAGNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIA 360

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BLAST of Csor.00g239630 vs. ExPASy Swiss-Prot
Match: Q9NEU5 (Ribosome biogenesis protein NOP53 OS=Caenorhabditis elegans OX=6239 GN=Y39B6A.33 PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.1e-16
Identity = 118/413 (28.57%), Postives = 187/413 (45.28%), Query Frame = 0


Query: 5   SKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLS--VKR 64
           +KGSR  KK WR   +  DIED +   ++ A +GG +S +  + LF+VD++   +  V  
Sbjct: 10  AKGSRHNKKYWRKGTNIDDIEDSIHIKSRQAATGGVISEMKDEDLFIVDRTATANKPVVP 69

Query: 65  KIEKKREKVLYCDSILTKNPFVQAV----PSSINKKPKK--KLEEGS------KAKETSE 124
           K+ KK++  L     +TKN   + V    PS+ +K  KK  KL  G+      K  + + 
Sbjct: 70  KLTKKQQAAL---EKITKNITQEHVTLPKPSTTSKILKKPAKLPRGNAILALKKGPKAAA 129

Query: 125 DGAKVGMFDIWSDKGENKSKKSK--------------KSSKP--------SIIPAVEVEP 184
             AK   FD+W+     K  KSK              K  +P        S++PAV++  
Sbjct: 130 PAAKKKNFDVWTTDLTPKIPKSKLENQEAAEHFLKVVKKKQPKTPGKSITSLLPAVQIAE 189

Query: 185 SGCSFNPPHESHQDVLARAVAEEMQKVYRNE----LGPEPVPLTVTGEAISEEDMLFLDA 244
            G S+NP    +Q+ +A+   EE QK+  +E     G EP       E ++ E   FL+ 
Sbjct: 190 GGASYNPESAEYQEYVAKIAGEE-QKLIDHEAKIKAGIEP-----QWEKVTTEHERFLEM 249

Query: 245 DNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKRARNKEQRRKEAESKKLKGISKEID 304
                      + DE++ E         T  E   +++  E  R   E KK K  ++++D
Sbjct: 250 AEGLRIHPKYGKDDEEEEEAGNSEKSMKTGGEAEPKSQRVECDRMTKEQKKKKAKAQKLD 309

Query: 305 SLPD-ILQETAKE----------------DEERQNRLIRRTIAKQERL---KSCPPRLGR 358
                 L+E AKE                DEE + R     + K+E+L    +   +LG+
Sbjct: 310 KEEKRRLEEKAKEQDSHNVYRTKQLHKELDEEEKQRHEESEVRKKEKLINKLTKRQQLGK 369

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BLAST of Csor.00g239630 vs. ExPASy Swiss-Prot
Match: Q9UUI4 (Ribosome biogenesis protein NOP53 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rrp16 PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 2.7e-16
Identity = 100/395 (25.32%), Postives = 185/395 (46.84%), Query Frame = 0


Query: 6   KGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSVKRKIE 65
           + SRK K+AWR NI   DIE  LE++  + + GG++   P+D+LFV+D   D  + ++  
Sbjct: 14  QSSRKNKRAWRKNIDLEDIESGLEQTRDEEIKGGNVEHKPNDALFVIDTLGDDRIAKR-S 73

Query: 66  KKREKVLYCDSILTKNPFVQAVPSSI-------NKKPK--------------KKLEEG-- 125
           +K+ K L  D IL     ++ V S +       NKK K               K ++G  
Sbjct: 74  RKKIKPLKVDQILENKSSIEKVHSHLTNNSTESNKKGKIFSRKELNRLQALVYKNKDGLT 133

Query: 126 --SKAKETSEDGAKVGMFDIWSDKGENKSKKSKKSSKPSI----------IPAVEVEPSG 185
             S A E          +D+W           + S+   +          +P V +   G
Sbjct: 134 ATSAASELKNTKQPKESYDVWETNPTVTIPVKRPSTLSKLPESLTENNAKVPNVVIADPG 193

Query: 186 CSFNPPHESHQDVLARAVAEEMQKVYR--NELGPEPVPLTVTGEAISEEDMLFLDADNDT 245
            S+NP   +   +L    +EE++K  +  +EL  +     +  +A  ++ ++   +D D 
Sbjct: 194 MSYNPDAAAWMKLLDTKGSEELKKEQKRISELEEKE---RIQKKAFEDKGLV---SDQDV 253

Query: 246 DDETNLDEMDEDDIEKRPL---RTKRVTRVELNKRARNKEQRRKEAESKKLKGISKEIDS 305
           +   + D+  E +  + P+   + KR TR + NK  + +E+  +  E KK + + + ID 
Sbjct: 254 NHSIDSDDQSEHEQAETPIPSSKNKRKTRSQRNKIRQRREEELRLLEQKKNEELLRTIDK 313

Query: 306 LPDILQETAKED--EERQNRLIRRTIAKQERLKSCPPRLGRHKFEPAPVQVLLSEEITGS 356
            P I ++  ++D  E+  N+ +  +  +   +K    + G+H+    P+++ L +E+T S
Sbjct: 314 APAISKKLQQKDKAEKFSNKAVSSSTTE---IKLKKKKFGKHRLPNNPLEIKLGDELTSS 373

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BLAST of Csor.00g239630 vs. ExPASy Swiss-Prot
Match: Q9NZM5 (Ribosome biogenesis protein NOP53 OS=Homo sapiens OX=9606 GN=NOP53 PE=1 SV=2)

HSP 1 Score: 84.7 bits (208), Expect = 2.3e-15
Identity = 120/428 (28.04%), Postives = 190/428 (44.39%), Query Frame = 0


Query: 3   KKSKGSRKGKKAWRANIS---SADIEDFLEK-STKDALSGGSLSAVPSDSLFVVD---KS 62
           ++ +G R  K+ WR         +++ FLE    ++  SGG LS  P++ LF VD   K 
Sbjct: 36  RRRRGPRNKKRGWRRLAQEPLGLEVDQFLEDVRLQERTSGGLLSEAPNEKLFFVDTGSKE 95

Query: 63  RDLSVKR-KIEKKR---EKVLYCDSIL--------TKNPFVQAVPSSINKKPKKKLEE-- 122
           + L+ KR K++KK    +K L  D IL         K+     VP++   + K++L E  
Sbjct: 96  KGLTKKRTKVQKKSLLLKKPLRVDLILENTSKVPAPKDVLAHQVPNAKKLRRKEQLWEKL 155

Query: 123 ---------------------GSKAKETSEDGAKVGMFDIWSDKG--------------E 182
                                 ++AK   +D  +   +D+W+                 E
Sbjct: 156 AKQGELPREVRRAQARLLNPSATRAKPGPQDTVERPFYDLWASDNPLDRPLVGQDEFFLE 215

Query: 183 NKSKKSKK-----SSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNELG 242
              KK  K      +KPS  PAVEV P+G S+NP  E HQ +L+ A   E+Q+    E  
Sbjct: 216 QTKKKGVKRPARLHTKPSQAPAVEVAPAGASYNPSFEDHQTLLSAAHEVELQRQKEAEKL 275

Query: 243 PEPVPLTVTGEAISEEDML-----FLDADNDTDDETNLDEMDE-DDIEKRPLRTKRVTRV 302
              + L  T +A ++E         L  ++D + E    E  E  D E  P   +  T  
Sbjct: 276 ERQLALPATEQAATQESTFQELCEGLLEESDGEGEPGQGEGPEAGDAEVCPTPARLATTE 335

Query: 303 ELNKRARNKEQ-----RRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIA 358
           +  ++ R +E+     R ++A  +  +   +E+  L  I  + A    E   R  RR  A
Sbjct: 336 KKTEQQRRREKAVHRLRVQQAALRAARLRHQELFRLRGIKAQVALRLAELARRQ-RRRQA 395

[Close]

BLAST of Csor.00g239630 vs. ExPASy Swiss-Prot
Match: Q8BK35 (Ribosome biogenesis protein NOP53 OS=Mus musculus OX=10090 GN=Nop53 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.3e-12
Identity = 113/438 (25.80%), Postives = 190/438 (43.38%), Query Frame = 0


Query: 3   KKSKGSRKGKKAWRANIS---SADIEDFLEK-STKDALSGGSLSAVPSDSLFVVD---KS 62
           ++ +G R  K+ WR         +++ FLE    ++  +GG L+  P++ LF VD   K 
Sbjct: 36  RRRRGPRNKKRGWRRLAEEPLGLEVDQFLEDVRLQERTTGGLLAEAPNEKLFFVDTGFKR 95

Query: 63  RDLSVKRKIEKKR----EKVLYCDSILTKNPFVQA--------VPSSINKKPKKKLEE-- 122
           ++   KR + +K+    +K L  D  L  +  + A        VP++   + K++L E  
Sbjct: 96  KEPRKKRTLVQKKSQRLQKPLRVDLALENHSKIPAPKDILAHQVPNAKKLRRKEELWEKL 155

Query: 123 ---------------------GSKAKETSEDGAKVGMFDIWSDKG--------------E 182
                                  KAK   +D  +   +D+W+                 E
Sbjct: 156 AKQGELPRDVRKAQARLLSPPTPKAKPGPQDIIERPFYDLWNPDNPLDTPLIGQDAFFLE 215

Query: 183 NKSKKSKKSS-----KPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNELG 242
              KK  +       KPS +PAVEV P+G S+NP  E HQ +L  A   E+Q+    E  
Sbjct: 216 QTKKKGVRRPQRLHIKPSQVPAVEVIPAGASYNPTFEDHQALLREAHEVELQREKEAEKL 275

Query: 243 PEPVPLTVTGEAISEEDM-------LFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTR 302
              + L  + +A ++E +       L  ++D + + E       E       +       
Sbjct: 276 ERQLALPTSEQAATQESVFREMCEGLLEESDGEDEHEAGRAGQPEAGDGTTEISPTGAAG 335

Query: 303 VELNKRARNKEQRRKEAESKKLKGIS----------KEIDSLPDILQETAKEDEE----R 358
            E     + ++QRR+E  ++KL+             +E+  L  I  + A+   E    R
Sbjct: 336 PEKRMEKKTEQQRRREKAARKLRVQQAALRAARLQHQELFRLRGIKAQVARRLAELARRR 395

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BLAST of Csor.00g239630 vs. NCBI nr
Match: KAG6599955.1 (Ribosome biogenesis protein NOP53, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 664 bits (1712), Expect = 1.28e-239
Identity = 357/357 (100.00%), Postives = 357/357 (100.00%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL
Sbjct: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240
           GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR
Sbjct: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240

Query: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPP 300
           ARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPP
Sbjct: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPP 300

Query: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK
Sbjct: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357

[Close]

BLAST of Csor.00g239630 vs. NCBI nr
Match: XP_022941857.1 (ribosome biogenesis protein NOP53 [Cucurbita moschata] >KAG7030634.1 hypothetical protein SDJN02_04671 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 657 bits (1694), Expect = 7.10e-237
Identity = 354/357 (99.16%), Postives = 354/357 (99.16%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANISSADIEDF EKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISSADIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKK KKKLEEGSKAKETSEDGAKVGMFDI
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKSKKKLEEGSKAKETSEDGAKVGMFDI 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL
Sbjct: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240
           GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR
Sbjct: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240

Query: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPP 300
           ARNKEQRRKEAESKKLKGISKEIDSLPDILQE AKEDEERQNRLIRRTIAKQERLKSCPP
Sbjct: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQEIAKEDEERQNRLIRRTIAKQERLKSCPP 300

Query: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK
Sbjct: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357

[Close]

BLAST of Csor.00g239630 vs. NCBI nr
Match: XP_023537970.1 (ribosome biogenesis protein NOP53 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 655 bits (1691), Expect = 2.03e-236
Identity = 353/357 (98.88%), Postives = 354/357 (99.16%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANISSADIEDF EKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISSADIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKK KKKLEEGSKAKETSEDGAKVGMFD+
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKSKKKLEEGSKAKETSEDGAKVGMFDM 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL
Sbjct: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240
           GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR
Sbjct: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240

Query: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPP 300
           ARNKEQRRKEAESKKLKGISKEIDSLPDILQE AKEDEERQNRLIRRTIAKQERLKSCPP
Sbjct: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQEIAKEDEERQNRLIRRTIAKQERLKSCPP 300

Query: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK
Sbjct: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357

[Close]

BLAST of Csor.00g239630 vs. NCBI nr
Match: XP_022996053.1 (ribosome biogenesis protein NOP53 [Cucurbita maxima] >XP_022996062.1 ribosome biogenesis protein NOP53 [Cucurbita maxima] >XP_022996070.1 ribosome biogenesis protein NOP53 [Cucurbita maxima])

HSP 1 Score: 654 bits (1686), Expect = 1.18e-235
Identity = 352/357 (98.60%), Postives = 353/357 (98.88%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANISSADIEDF EKSTKDALSGGSLSAVP+DSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISSADIEDFFEKSTKDALSGGSLSAVPNDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKK KKKLEEGSKAKETSEDGAKVGMFDI
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKTKKKLEEGSKAKETSEDGAKVGMFDI 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL
Sbjct: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240
           GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR
Sbjct: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240

Query: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPP 300
           ARNKEQRRKEAESKKLKGISKEIDSLPDILQE AKEDEERQNRLIRRTIAKQERLKSCPP
Sbjct: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQEIAKEDEERQNRLIRRTIAKQERLKSCPP 300

Query: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           RLGRHKFEP PVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK
Sbjct: 301 RLGRHKFEPPPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357

[Close]

BLAST of Csor.00g239630 vs. NCBI nr
Match: XP_022942752.1 (ribosome biogenesis protein NOP53-like [Cucurbita moschata] >KAG6600893.1 Ribosome biogenesis protein NOP53, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 567 bits (1462), Expect = 1.61e-201
Identity = 310/360 (86.11%), Postives = 332/360 (92.22%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANIS+A+IEDF EKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSS+NKK KKK EE S  KE S+DGAKVG+ D+
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDL 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           W DKGE +SK SKK  KPSIIPAVEVEP GCSFNP HESHQDVLA+AVAEEMQKVYRNEL
Sbjct: 121 WDDKGEARSKISKKP-KPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDD---IEKRPLRTKRVTRVEL 240
           GP PVPLTV GEAISEEDMLFLDADN++DDETNLDEMD+D+   +EKRPL+ +RVTRVE 
Sbjct: 181 GPAPVPLTVPGEAISEEDMLFLDADNNSDDETNLDEMDQDENNELEKRPLKMRRVTRVEF 240

Query: 241 NKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKS 300
           NKRAR+KEQ +KEAE+KKLKGISK+IDSLPDI+QE AKEDEER  R +RRTIAKQERLKS
Sbjct: 241 NKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAKQERLKS 300

Query: 301 CPPRLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           CPPRLG+HKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAK SRRK
Sbjct: 301 CPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAK-SRRK 358

[Close]

BLAST of Csor.00g239630 vs. ExPASy TrEMBL
Match: A0A6J1FNM5 (Ribosome biogenesis protein NOP53 OS=Cucurbita moschata OX=3662 GN=LOC111447089 PE=3 SV=1)

HSP 1 Score: 657 bits (1694), Expect = 3.44e-237
Identity = 354/357 (99.16%), Postives = 354/357 (99.16%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANISSADIEDF EKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISSADIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKK KKKLEEGSKAKETSEDGAKVGMFDI
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKSKKKLEEGSKAKETSEDGAKVGMFDI 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL
Sbjct: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240
           GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR
Sbjct: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240

Query: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPP 300
           ARNKEQRRKEAESKKLKGISKEIDSLPDILQE AKEDEERQNRLIRRTIAKQERLKSCPP
Sbjct: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQEIAKEDEERQNRLIRRTIAKQERLKSCPP 300

Query: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK
Sbjct: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357

[Close]

BLAST of Csor.00g239630 vs. ExPASy TrEMBL
Match: A0A6J1K5P1 (Ribosome biogenesis protein NOP53 OS=Cucurbita maxima OX=3661 GN=LOC111491372 PE=3 SV=1)

HSP 1 Score: 654 bits (1686), Expect = 5.69e-236
Identity = 352/357 (98.60%), Postives = 353/357 (98.88%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANISSADIEDF EKSTKDALSGGSLSAVP+DSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISSADIEDFFEKSTKDALSGGSLSAVPNDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKK KKKLEEGSKAKETSEDGAKVGMFDI
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKTKKKLEEGSKAKETSEDGAKVGMFDI 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL
Sbjct: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240
           GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR
Sbjct: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDDIEKRPLRTKRVTRVELNKR 240

Query: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKSCPP 300
           ARNKEQRRKEAESKKLKGISKEIDSLPDILQE AKEDEERQNRLIRRTIAKQERLKSCPP
Sbjct: 241 ARNKEQRRKEAESKKLKGISKEIDSLPDILQEIAKEDEERQNRLIRRTIAKQERLKSCPP 300

Query: 301 RLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           RLGRHKFEP PVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK
Sbjct: 301 RLGRHKFEPPPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357

[Close]

BLAST of Csor.00g239630 vs. ExPASy TrEMBL
Match: A0A6J1FR54 (Ribosome biogenesis protein NOP53 OS=Cucurbita moschata OX=3662 GN=LOC111447694 PE=3 SV=1)

HSP 1 Score: 567 bits (1462), Expect = 7.81e-202
Identity = 310/360 (86.11%), Postives = 332/360 (92.22%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANIS+A+IEDF EKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSS+NKK KKK EE S  KE S+DGAKVG+ D+
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDL 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           W DKGE +SK SKK  KPSIIPAVEVEP GCSFNP HESHQDVLA+AVAEEMQKVYRNEL
Sbjct: 121 WDDKGEARSKISKKP-KPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDD---IEKRPLRTKRVTRVEL 240
           GP PVPLTV GEAISEEDMLFLDADN++DDETNLDEMD+D+   +EKRPL+ +RVTRVE 
Sbjct: 181 GPAPVPLTVPGEAISEEDMLFLDADNNSDDETNLDEMDQDENNELEKRPLKMRRVTRVEF 240

Query: 241 NKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKS 300
           NKRAR+KEQ +KEAE+KKLKGISK+IDSLPDI+QE AKEDEER  R +RRTIAKQERLKS
Sbjct: 241 NKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAKQERLKS 300

Query: 301 CPPRLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           CPPRLG+HKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAK SRRK
Sbjct: 301 CPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAK-SRRK 358

[Close]

BLAST of Csor.00g239630 vs. ExPASy TrEMBL
Match: A0A6J1JS50 (Ribosome biogenesis protein NOP53 OS=Cucurbita maxima OX=3661 GN=LOC111488412 PE=3 SV=1)

HSP 1 Score: 566 bits (1459), Expect = 2.23e-201
Identity = 310/360 (86.11%), Postives = 331/360 (91.94%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANIS+A+IEDF EKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKREKVLYCDSILTKNPFVQAVPSS+NKK KKK EE S  KE S+DGAKVG+ D+
Sbjct: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSVNKKSKKKPEEASTVKEASQDGAKVGLLDL 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           W DK E +SK SKK  KPSIIPAVEVEP GCSFNP HESHQDVLA+AVAEEMQKVYRNEL
Sbjct: 121 WDDKDEARSKISKKP-KPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAEEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDD---IEKRPLRTKRVTRVEL 240
           GP PVPLTV GEAISEEDMLFLDADN+TDDETNLDEMD+D+   +EKRPL+ +RVTRVE 
Sbjct: 181 GPAPVPLTVPGEAISEEDMLFLDADNNTDDETNLDEMDQDENNELEKRPLKMRRVTRVEF 240

Query: 241 NKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKS 300
           NKRAR+KEQ +KEAE+KKLKGISK+IDSLPDI+QE AKEDEER  R +RRTIAKQERLKS
Sbjct: 241 NKRARHKEQAKKEAEAKKLKGISKDIDSLPDIIQEIAKEDEERDKRRMRRTIAKQERLKS 300

Query: 301 CPPRLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRRK 357
           CPPRLG+HKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAK SRRK
Sbjct: 301 CPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAK-SRRK 358

[Close]

BLAST of Csor.00g239630 vs. ExPASy TrEMBL
Match: A0A1S3C5J4 (Ribosome biogenesis protein NOP53 OS=Cucumis melo OX=3656 GN=LOC103496720 PE=3 SV=1)

HSP 1 Score: 554 bits (1428), Expect = 1.22e-196
Identity = 296/359 (82.45%), Postives = 329/359 (91.64%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGKKSKGSRKGKKAWRANIS+A+IEDF EKSTKDALSGGSLSA+PSDSLFVVDKSRDLSV
Sbjct: 1   MGKKSKGSRKGKKAWRANISTAEIEDFFEKSTKDALSGGSLSALPSDSLFVVDKSRDLSV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKKLEEGSKAKETSEDGAKVGMFDI 120
           KRKIEKKR++VLYCDSILTKNPFVQAVPSS+NKK KKK +E S  ++ S++G KVGM D+
Sbjct: 61  KRKIEKKRDRVLYCDSILTKNPFVQAVPSSVNKKSKKKPKEASSVRDISQEGPKVGMLDL 120

Query: 121 WSDKGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQKVYRNEL 180
           W D+GE +SKK+ K SKPSIIPAVEVEP GCSFNP HESHQDVLA+AVA+EMQKVYRNEL
Sbjct: 121 WDDEGEVRSKKTSKISKPSIIPAVEVEPPGCSFNPSHESHQDVLAQAVAQEMQKVYRNEL 180

Query: 181 GPEPVPLTVTGEAISEEDMLFLDADNDTDDETNLDEMDEDD---IEKRPLRTKRVTRVEL 240
           GP PVPLTV GE ISEEDMLFLDAD +TD ETNLDEMD+D+   +EKRPL+ +RVTRVE+
Sbjct: 181 GPAPVPLTVPGEVISEEDMLFLDADINTDGETNLDEMDQDEDNELEKRPLKMRRVTRVEM 240

Query: 241 NKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETAKEDEERQNRLIRRTIAKQERLKS 300
           NKRAR KE+ RKEAE+KKL+GISKEIDSLPDI+QE AKEDEER+NR IRRTIAKQERLKS
Sbjct: 241 NKRARQKEKVRKEAEAKKLEGISKEIDSLPDIIQEIAKEDEERENRRIRRTIAKQERLKS 300

Query: 301 CPPRLGRHKFEPAPVQVLLSEEITGSLRKLKGCCTLVKDRFKSLEKRGIIAPTAKKSRR 356
           CPPRLG+HKFEPAPVQVLLSEEITGSLRKLKGCCTLV+DR+KSLEKRGIIAPTAK  R+
Sbjct: 301 CPPRLGKHKFEPAPVQVLLSEEITGSLRKLKGCCTLVRDRYKSLEKRGIIAPTAKTRRK 359

[Close]

BLAST of Csor.00g239630 vs. TAIR 10
Match: AT2G40430.1 (CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 709 Blast hits to 643 proteins in 201 species: Archae - 0; Bacteria - 32; Metazoa - 224; Fungi - 154; Plants - 45; Viruses - 0; Other Eukaryotes - 254 (source: NCBI BLink). )

HSP 1 Score: 349.0 bits (894), Expect = 4.6e-96
Identity = 225/442 (50.90%), Postives = 274/442 (61.99%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGK+SK SRKGKKAWRANISS DIEDF EK+T+DALSGG+LSA PS+ LF VDKS DL V
Sbjct: 1   MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKK----LEEGSKAKETSEDGAKVG 120
           KRKIEK RE+VL  DSIL KNPFVQ VPSS  K  K K    +E+ +  +     G    
Sbjct: 61  KRKIEKHRERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSV 120

Query: 121 MFDIWSD--KGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQK 180
           M D+W D  KGE++S   K    PSII AVE+E  GCS+NP  ESHQD+LA AVA+EMQK
Sbjct: 121 MADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQK 180

Query: 181 VYRNELGPEPVPLTVTGEAISEEDMLFLDADNDTDDE----------------------- 240
           VY+ ELGP PVPLT+ G+ +SE++  FLD DN ++ E                       
Sbjct: 181 VYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQ 240

Query: 241 ------TNLDEMDE---------------------DDIEKR------------------- 300
                 TNL ++++                     DDI++                    
Sbjct: 241 LKPSSNTNLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDV 300

Query: 301 -----------PLRTKRVTRVELNKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETA 357
                        +TKRVTRVELNKR R K  R+KE + K  + I  EIDSLP+IL+E A
Sbjct: 301 KIEVSEAGNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIA 360

[Close]

BLAST of Csor.00g239630 vs. TAIR 10
Match: AT2G40430.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor protein Gltscr2 (InterPro:IPR011211); Has 706 Blast hits to 639 proteins in 197 species: Archae - 0; Bacteria - 32; Metazoa - 228; Fungi - 147; Plants - 47; Viruses - 0; Other Eukaryotes - 252 (source: NCBI BLink). )

HSP 1 Score: 349.0 bits (894), Expect = 4.6e-96
Identity = 225/442 (50.90%), Postives = 274/442 (61.99%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGK+SK SRKGKKAWRANISS DIEDF EK+T+DALSGG+LSA PS+ LF VDKS DL V
Sbjct: 1   MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKK----LEEGSKAKETSEDGAKVG 120
           KRKIEK RE+VL  DSIL KNPFVQ VPSS  K  K K    +E+ +  +     G    
Sbjct: 61  KRKIEKHRERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSV 120

Query: 121 MFDIWSD--KGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQK 180
           M D+W D  KGE++S   K    PSII AVE+E  GCS+NP  ESHQD+LA AVA+EMQK
Sbjct: 121 MADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQK 180

Query: 181 VYRNELGPEPVPLTVTGEAISEEDMLFLDADNDTDDE----------------------- 240
           VY+ ELGP PVPLT+ G+ +SE++  FLD DN ++ E                       
Sbjct: 181 VYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQ 240

Query: 241 ------TNLDEMDE---------------------DDIEKR------------------- 300
                 TNL ++++                     DDI++                    
Sbjct: 241 LKPSSNTNLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKEDLKYFLEVGNVGEGEDNKDV 300

Query: 301 -----------PLRTKRVTRVELNKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETA 357
                        +TKRVTRVELNKR R K  R+KE + K  + I  EIDSLP+IL+E A
Sbjct: 301 KIEVSEAGNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIA 360

[Close]

BLAST of Csor.00g239630 vs. TAIR 10
Match: AT2G40430.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumour suppressor protein Gltscr2 (InterPro:IPR011211), P60-like (InterPro:IPR011687). )

HSP 1 Score: 349.0 bits (894), Expect = 4.6e-96
Identity = 225/441 (51.02%), Postives = 273/441 (61.90%), Query Frame = 0


Query: 1   MGKKSKGSRKGKKAWRANISSADIEDFLEKSTKDALSGGSLSAVPSDSLFVVDKSRDLSV 60
           MGK+SK SRKGKKAWRANISS DIEDF EK+T+DALSGG+LSA PS+ LF VDKS DL V
Sbjct: 1   MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60

Query: 61  KRKIEKKREKVLYCDSILTKNPFVQAVPSSINKKPKKK----LEEGSKAKETSEDGAKVG 120
           KRKIEK RE+VL  DSIL KNPFVQ VPSS  K  K K    +E+ +  +     G    
Sbjct: 61  KRKIEKHRERVLRVDSILKKNPFVQLVPSSKPKLKKSKKTIVIEDKAPKQVQKSVGDDSV 120

Query: 121 MFDIWSD--KGENKSKKSKKSSKPSIIPAVEVEPSGCSFNPPHESHQDVLARAVAEEMQK 180
           M D+W D  KGE++S   K    PSII AVE+E  GCS+NP  ESHQD+LA AVA+EMQK
Sbjct: 121 MADLWGDDSKGEHESNPRKIFKNPSIISAVEIEHPGCSYNPTTESHQDMLAEAVAQEMQK 180

Query: 181 VYRNELGPEPVPLTVTGEAISEEDMLFLDADNDTDDE----------------------- 240
           VY+ ELGP PVPLT+ G+ +SE++  FLD DN ++ E                       
Sbjct: 181 VYKTELGPAPVPLTIEGDTLSEDERYFLDVDNFSEGEDNENVENEVSEAGIKLKENPFVQ 240

Query: 241 ------TNLDEMDE---------------------DDIEKRPL----------------- 300
                 TNL ++++                     DDI+                     
Sbjct: 241 LKPSSNTNLKKIEDKTPRQAQKSVGDDSVMVDLLGDDIKDLKYFLEVGNVGEGEDNKDVK 300

Query: 301 ------------RTKRVTRVELNKRARNKEQRRKEAESKKLKGISKEIDSLPDILQETAK 357
                       +TKRVTRVELNKR R K  R+KE + K  + I  EIDSLP+IL+E AK
Sbjct: 301 IEVSEAGNNVSRKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIAK 360

The following BLAST results are available for this feature:

BLAST of Csor.00g239630 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22892	6.4e-95	50.90	Ribosome biogenesis protein NOP53 OS=Arabidopsis thaliana OX=3702 GN=At2g40430 P...	[more]
Q9NEU5	2.1e-16	28.57	Ribosome biogenesis protein NOP53 OS=Caenorhabditis elegans OX=6239 GN=Y39B6A.33...	[more]
Q9UUI4	2.7e-16	25.32	Ribosome biogenesis protein NOP53 OS=Schizosaccharomyces pombe (strain 972 / ATC...	[more]
Q9NZM5	2.3e-15	28.04	Ribosome biogenesis protein NOP53 OS=Homo sapiens OX=9606 GN=NOP53 PE=1 SV=2	[more]
Q8BK35	2.3e-12	25.80	Ribosome biogenesis protein NOP53 OS=Mus musculus OX=10090 GN=Nop53 PE=1 SV=1	[more]

BLAST of Csor.00g239630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599955.1	1.28e-239	100.00	Ribosome biogenesis protein NOP53, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022941857.1	7.10e-237	99.16	ribosome biogenesis protein NOP53 [Cucurbita moschata] >KAG7030634.1 hypothetica...	[more]
XP_023537970.1	2.03e-236	98.88	ribosome biogenesis protein NOP53 [Cucurbita pepo subsp. pepo]	[more]
XP_022996053.1	1.18e-235	98.60	ribosome biogenesis protein NOP53 [Cucurbita maxima] >XP_022996062.1 ribosome bi...	[more]
XP_022942752.1	1.61e-201	86.11	ribosome biogenesis protein NOP53-like [Cucurbita moschata] >KAG6600893.1 Riboso...	[more]

BLAST of Csor.00g239630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FNM5	3.44e-237	99.16	Ribosome biogenesis protein NOP53 OS=Cucurbita moschata OX=3662 GN=LOC111447089 ...	[more]
A0A6J1K5P1	5.69e-236	98.60	Ribosome biogenesis protein NOP53 OS=Cucurbita maxima OX=3661 GN=LOC111491372 PE...	[more]
A0A6J1FR54	7.81e-202	86.11	Ribosome biogenesis protein NOP53 OS=Cucurbita moschata OX=3662 GN=LOC111447694 ...	[more]
A0A6J1JS50	2.23e-201	86.11	Ribosome biogenesis protein NOP53 OS=Cucurbita maxima OX=3661 GN=LOC111488412 PE...	[more]
A0A1S3C5J4	1.22e-196	82.45	Ribosome biogenesis protein NOP53 OS=Cucumis melo OX=3656 GN=LOC103496720 PE=3 S...	[more]

BLAST of Csor.00g239630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40430.1	4.6e-96	50.90	CONTAINS InterPro DOMAIN/s: P60-like (InterPro:IPR011687), Tumour suppressor pro...	[more]
AT2G40430.2	4.6e-96	50.90	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT2G40430.3	4.6e-96	51.02	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 275..295
None	No IPR available	COILS	Coil	Coil	coord: 234..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..226
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..160
IPR011687	Ribosome biogenesis protein Nop53/GLTSCR2	PIRSF	PIRSF017302	Gltscr2	coord: 1..117 e-value: 4.2E-15 score: 53.5 coord: 121..357 e-value: 6.6E-31 score: 105.6
IPR011687	Ribosome biogenesis protein Nop53/GLTSCR2	PFAM	PF07767	Nop53	coord: 8..341 e-value: 2.6E-61 score: 208.2
IPR011687	Ribosome biogenesis protein Nop53/GLTSCR2	PANTHER	PTHR14211	GLIOMA SUPPRESSOR CANDIDATE REGION GENE 2	coord: 1..357

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g239630.m01	Csor.00g239630.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006364	rRNA processing
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0008097	5S rRNA binding