Csor.00g238560 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g238560
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr10: 6096628 .. 6102811 (-)
RNA-Seq Expression	Csor.00g238560
Synteny	Csor.00g238560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACCTATCCCCAAGACTGAGCTGCATCCATCTCCTAAACAACATACTGAACTCTTCCCTTCTTCAACTCAAACAAATTCACGCCCAATTGATCACCAATGCCTTCAAATCCCCCTCCCCTTACGCCAAATTAATCGCCCATTTCTGCAACAAGCATTCCCCCGAAGCCACCGCCTACGCCCATTCCATATCCCTGCACCACCGACACCCCACCAATCTCTTCCTCTTCAACACCCTCATACGATGCGCTCCGCCTCAACATTCCATCTCCATTTTCGCCAATTCGGTCTCCACTGCTCACTTCCAATTCGACGATTTCACTTTCATTTTCCTGCTCGGAGCTTGCGCGCGGGCTCCATCGCCGCCGACGTTAACCACCGGCAAGCAGATTCATACTCATATTCTCAAACGTGGGGTTGTTTCAAACATTTGGGTGCAGACTACCATGATTCATTTTTACGCGATTAACAAAGATGTGGGTGCTGCACGGAAGGTGTTCGATGAAATGCCTGTGAGAAATAATGTTACCTGGAATGCGATGATTGCAGGGTACTGCTCACAAAGTGGAAGGGTGGCTCATAAATATGGTCTAGAAGCGTTGGATTTGTTTCGGGCGATGTTGGTTGAATCAACGAATTCTGATGTCAATCCAACGGATACTACAATGGTCTGTCTTCTTTCAGCTGCATCTCAACTGGGTGTGCTTGAAACCGGCGTTTGCGTTCATGCATACATCGAGAAAACAATTGATTCCCCTGAAAATGATGTGTTTATTGGTACTGGTTTGGTTAATATGTACTCAAAATGTGGGTGTCTCAACAGTGCTTCATCAGTTTTTAAGCAGATGAAGCAGAGGAACGTTTTGACATGGACAGCGATGGCGACAGGGTTGGCCATTCATGGAAAGGGTAAAGAAGCATTGGAGCTTTTGGAAGCAATGGGAGGTCATGGTGTAAAGCCAAACGCAGTAACCTTCACAAGTCTACTTTCTGGTTGCTGTCATGGGGGGCTTATCGAAGAGGGGCTCCATTTGTTTGATGTAATGGAGAGGAAGTTCGGTGTTGTGCCACAAATGCAGCATTATGGCTGCATTGTTGACCTTCTTGGGCGGTGTGGGCACTTGAAAGAGGCATATGAGCTGATACTTGGGATGCCAATGGCGCCTGATGGTGTGTTATGGAGGAGTTTGATGAGTTCTTGTATGGTTCATTGCGATGTTGAAATGGGAGAGAAGGTGGGGAAGTTCCTTGTGGAGAGTGTTGTTGGTGATGAGTGGTGTGATGGAAGTGAGGACTTTGTAGCTTTGTCGAATGTTTATGCTTCTGCTCAAAGGTGGGAGAATGTGAAGGCTGTAAGAGAGGAGATGAAGATCAAAGGGATTCAAAACAAAGCCGGGTATAGTTCGGTTCAAACTAGGGGTTAGAGACGGCGTATAGTTCGGTTCAAACTAGGGGTTAGAGACGGCGTATAGTTCGGTTCAAACTAGGGGTTAGAGACGGCGTATAGTTCGGTTCAAACTAGGGGTTAGAGACGGCGTATAGTTCGGTTCAAACTAGGGGTTAGAGACAGGGTATAGTTCGGTTCAAACTAGGGGTTAGAGACGAGTTAACGAAAATTCATCGTTAAAACATCTGTAACATCGTTATGAACTAAATTTATAATCTGTAACATCGTTATGAACTAAATTTATAATCTGTAACATCGTTATGAACTAAATTTATAATCTGTAACATCGTTATGAACTAAATTTATAATCTGTAACATCGTTATGAACTAAATTTATAATCTGTAACATCGTTATGAACTAAATTTATAATCTGTAACATCATTATGAACTAAATTTATAATCTATAACATCATTATGAACTAAATTTATAATCTAACGGAAATAGTATTAGAAAAAGTATGAACGACCCAATGCTAGGATTATTATCTTCGAATTTATGGAGAAATATGAGTTTTCTCTTTTACCCTTCATTTTGATGTGTAATTTTATTTTTGAATATGCTTAATTAATAATAATTCATTTAAATATATATTTAATTTGTTTTTACAAATAAAATTTATTAATTCCAACTTTTTTAATTAATTACTTAATTGGATTAACTTAGTAAAAATTTTATTTTCAATTATTATAACTATTAATGATTATTTATAATCAATTATTTGTTTATTTGGACTAATTTTGAATAGCTTATTCGTAATTTTAGAACACAGTTTACTCAAATTAAATTTACTAATTTACTAATTGTAATTAATGGTAATGAACTATATTGAATTAAAATTAATAATTATTGTATTATAATAATTTTTTTACTTTATTAATAATTTATCATAATTATATATGATTATTAGTATATTTTATTGAAAATAATTTATGGTATTTGATTTTTGAAATATAATAGGTATAACTAATATTTCAATTTGATTATTTTTTTTTATTATTTACTATTACAAGTTTATATTATATTATTAAAATTGATATTTAATGTAAAATTCCTAAAATTTAAGATTATTTATTTGATGAATGAAAGATAAATTAATATTTAATGAGTTTTCACTCCATAAAAATAAAATAATTATTTGCAACTAATTATCTCAAATTAGTTACGAAATAAAATAACTAATTGCAATTAATTATCTCAAATTAGTTATGAAATAAAATAACTAATTGCAACTAATTATCTCAAATTTTATGAAATAAAATAACTAATTGCAACTAATCGTCTCAAATTAGTTGGAAATAAACTAACTAATGACAACTAATTATCTCAAATTAGTTATGAAATAAAATAACTAATTGGAACTAATTATCTCAAATGAGTTTATGCTTGGAAGTACTTGAAATCTAATATAAATATTATTTATTTATAAAATATTATTTTCTGACGATTAAAGGAGTTGTCGAATTTAAGTCCCAAAAGTGATGAAGCATATTTGTATGTGTTTGCATTTTTCGATCCCAATAGTAGAATTATTTAAGAGTATTTTCACAAGCAAGGGACCTCTTTGTTTGACGACAACTTTTATTGTGGAGACCATGAAACGATTTTGATTCTAGATAGTTCTTTGGGGGCGTTGAAACAGTTTCTATTAATTGACTCTTGGTTAATATCTTTCATGTTTGAACTGTCTTTGAGGGACCAAATTTGTAATTTAACATTTTTTGTAATGTCAGAAATAATTATGTGTAAGAACTAAATTGAAAAGTAAACCTTAAATTTTAAAATTAGTCTTTCAATTTTCATTTATTTGTGTATTTTCACACTAAAGTTAGAAAATATTTAATAAATATCTCGTTAATCCTTCTAAATATTTAATAATATCTTGTTAATCCTTAAACTTTTAATTTTATATTCAATAGTTCATGAATCTATTATTAACCTATTGTATATAAGATACAAAATTGTAATTTCATTAGACATATAACTCATATAACTCGTATATAATTATTTTAAAAAAGTTTAATGTTTTATTTAATATATTTAAGCTTATCCTTCAAAAAGCACCAGTGGTCTAGTGGTAGAATAGTACCCTGCCACGGTACAGACCCGGGTTCGATTCCCGGCTGGTGCAGTTGTTTTGGTTTTTTTAGGTTTTCATTATTTTATTTATTTATTTTTTTTTGTTTGTTCGTTTATATGGAAAATTTCAATAGAAATATTAATAAATTCTCGAAAAATATATTAACATGATTGAATATATATTTAACTATTTTTAAATAAGTTTGATTTTTGTGAATATTTTTGCTATATTTAGTCTTTTTTTTTGTTTTGTTTTTATTTTTATTTTTAGGAAGGACCAGAAGCTTGAAATGACACAACTAAGAACAAGTACCCCACCTCAAAAGTTCTTTAAAGGGACATAATTGGTAAGACCCCAAATACGATTATGACACTCAAACAAGGATAAGGTACCCAAATAAGTGATTTCAATGTCCTAGCAAAGTTTTATAAAGTTCCAACAATTCGACTTTATCTCAAGTTATACTTATAGAAATAGGTTGGATTTCTATATAAACATTTATGTTAGGTATGAATATGGAAGAATTAAGTTAAGAACAAAGGATAAGTCCAAAATGACTAAAATGTCCCTACCATGCTTGAGTGTTGGTTTATGAAGCAGTAAACTCCAAATAACCTAAGAATTTTTATATGGCCTATTTTCAAGGATGTGAGAAGTTATGAAGATTTCAAAGTCGTTGGAGCACGTTTAGGGGCTAGACCAAGAATTAAGGATAAAATGACCAAAATGCCCCTAAAATTTTTGTACGATATTTTATGCAAGAATCTCAAGGAACATGTTATGATCTTTATAAAGACTTATGCAAGCTATTATGGAAATTTCTCGTGTTCATGGCTTATGAGCTTGGATTAGGGCTTAAAAACTCATGATAAGACTTATGTCATGGTTGTGCCTTAAGAATAACCTTTGGAGCAAGAACGTAAGAACCTATGAGACTAAGAAAATGCTCTAAATACAAAAGAGAAGAGCACAACACAAGCCCTAAGTGAACTTATGGATATGAAGACATGAAATGTTATTAGGAACTCATGCATGAAATTAAAAAGAATTCCGAACATGTTTGGGGTATGTACTCAGATTCAATTGGTAAAAGACGAAAGTATCCCTAATGATCTCTTTATAAGAATTCATGAAAATTCCATGAACCCGAGAGATATTTTATGGCATATATGGATTATGCTCCTCGAGGAGATATGTTGACACAAATAAGATAGGTATACTTTTGGGCAACTTTAAGCATGCCAAGAAATTAGGGTATGTTACAAGTATGCATTACCATATGGCTATAGTTCTTGACATAACATCATAAGGACATGAACAAGTCAAAACTTTGAACACCTCATGCCTTAAGGTTACTGTGACCTCCAAGAATGTTACGTAATACTCTAACCACGCCTGAAGTGATCCTTGACCTCTCACCACGCAGTTCATTATTATTTCATGTTTTCTTCATCTAAGTGGGATACTCTGCGTCAAAATTATTTAACAAGATTGACATGATTTTCTTATCTAGTTATCTAGTCAATAAAGAAATAGTGAGAACGATAAGTCTGTTTGTGAAGATTGTAGCAAAAAAATATTTGAGATGTTGTCTCAAAAAGTTAGATGGGTTTTTTTCCATGTGCACAATACAATTGTCGATGAAGAGGTTTTGGAGGGGACGTTAGCCCACTCTTCAGTGCAGGTGGTTTCTATATTGATCTTGAACCAAGTACAAGCCCTAGTTTGAAATAAAACTAAAAGAACTCAAGGTGCACATGCAAGACATATTGGACAAATGCTTTATCTTGTGTCGGGTTGAAGCTCGGAGGAGCATTTCAAATAGCACTAGTATACAAGTGGGAAAAAAAAAAAGTGATGTTAAGGTTGAGGAGAGGATTATTATTAGGACCTAAGAGAACCAACCCACTATCCTTTCCACCGACAAGAGCGAAAGGTTATGTTGCTATGTGAAACCAGCCTCATGCAGTTTCCTCCCCCTCTAAAGGCCACATTGGGCCTTCACCTAAAAAGCCCATGACCCAACTCCCTACTTGGAATGGATAGGCCAAAGAACCACTCTAGCCAACCCTAACCAATGGACTGAGCCAACCTCCAACCACTTTATTGCCCTATGGGTTACAAACTCACATTACCCCCATCACAATCCATACTTTGACCAGGTCCAAAAATTGGGTCTTTGACAGATATTGGTATCAAAGCAAAGATTCTTTATGCTATAAACGTCCTTGCTAACGAACCCGTAGTCGTCAAAAGAGGCCAGCAGATCGTCGAAGTAAAACCGCAGGTACTTACTGCTTCGGCTCACCTTTTCCTTGTCATCACGTGGAGGCTGAGCAATTGTCGTCATCACTGCTACTGTGTCATTGTTTGCAGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACAATGGTCAATTCTGATAAAGCACCCGACTTTGTGATGTGCATTGGAGACGATCGATCCGATGAAGATATGTTTGAGAGCATATTGAGTAGAAGCTATAGCTTATCCCTTGCTACGCCCCCGATGATATTTGCCTGTACTGTGGGACAAAAGCCTAGCAAAGCCAAATACTATTTAGACGATACCGCAGATGTTTTGACCTTGCTTCAAGCCTGGCCAACTGTTCTAGTAGCCGTAAACTGA

mRNA sequence

ATGCACCTATCCCCAAGACTGAGCTGCATCCATCTCCTAAACAACATACTGAACTCTTCCCTTCTTCAACTCAAACAAATTCACGCCCAATTGATCACCAATGCCTTCAAATCCCCCTCCCCTTACGCCAAATTAATCGCCCATTTCTGCAACAAGCATTCCCCCGAAGCCACCGCCTACGCCCATTCCATATCCCTGCACCACCGACACCCCACCAATCTCTTCCTCTTCAACACCCTCATACGATGCGCTCCGCCTCAACATTCCATCTCCATTTTCGCCAATTCGGTCTCCACTGCTCACTTCCAATTCGACGATTTCACTTTCATTTTCCTGCTCGGAGCTTGCGCGCGGGCTCCATCGCCGCCGACGTTAACCACCGGCAAGCAGATTCATACTCATATTCTCAAACGTGGGGTTGTTTCAAACATTTGGGTGCAGACTACCATGATTCATTTTTACGCGATTAACAAAGATGTGGGTGCTGCACGGAAGGTGTTCGATGAAATGCCTGTGAGAAATAATGTTACCTGGAATGCGATGATTGCAGGGTACTGCTCACAAAGTGGAAGGGTGGCTCATAAATATGGTCTAGAAGCGTTGGATTTGTTTCGGGCGATGTTGGTTGAATCAACGAATTCTGATGTCAATCCAACGGATACTACAATGGTCTGTCTTCTTTCAGCTGCATCTCAACTGGGTGTGCTTGAAACCGGCGTTTGCGTTCATGCATACATCGAGAAAACAATTGATTCCCCTGAAAATGATGTGTTTATTGGTACTGGTTTGGTTAATATGTACTCAAAATGTGGGTGTCTCAACAGTGCTTCATCAGTTTTTAAGCAGATGAAGCAGAGGAACGTTTTGACATGGACAGCGATGGCGACAGGGTTGGCCATTCATGGAAAGGGTAAAGAAGCATTGGAGCTTTTGGAAGCAATGGGAGGTCATGGTGTAAAGCCAAACGCAGTAACCTTCACAAGTCTACTTTCTGGTTGCTGTCATGGGGGGCTTATCGAAGAGGGGCTCCATTTGTTTGATGTAATGGAGAGGAAGTTCGGTGTTGTGCCACAAATGCAGCATTATGGCTGCATTGTTGACCTTCTTGGGCGGTGTGGGCACTTGAAAGAGGCATATGAGCTGATACTTGGGATGCCAATGGCGCCTGATGGTGTGTTATGGAGGAGTTTGATGAGTTCTTGTATGGTTCATTGCGATGTTGAAATGGGAGAGAAGGTGGGGAAGTTCCTTGTGGAGAGTGTTGTTGGTGATGAGTGGTGTGATGGAAGTGAGGACTTTGTAGCTTTGTCGAATGTTTATGCTTCTGCTCAAAGGTGGGAGAATGTGAAGGCTGTAAGAGAGGAGATGAAGATCAAAGGGATTCAAAACAAAGCCGGTCGTCAAAAGAGGCCAGCAGATCGTCGAAGTAAAACCGCAGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACAATGGTCAATTCTGATAAAGCACCCGACTTTGTGATGTGCATTGGAGACGATCGATCCGATGAAGATATGTTTGAGAGCATATTGAGTAGAAGCTATAGCTTATCCCTTGCTACGCCCCCGATGATATTTGCCTGTACTGTGGGACAAAAGCCTAGCAAAGCCAAATACTATTTAGACGATACCGCAGATGTTTTGACCTTGCTTCAAGCCTGGCCAACTGTTCTAGTAGCCGTAAACTGA

Coding sequence (CDS)

ATGCACCTATCCCCAAGACTGAGCTGCATCCATCTCCTAAACAACATACTGAACTCTTCCCTTCTTCAACTCAAACAAATTCACGCCCAATTGATCACCAATGCCTTCAAATCCCCCTCCCCTTACGCCAAATTAATCGCCCATTTCTGCAACAAGCATTCCCCCGAAGCCACCGCCTACGCCCATTCCATATCCCTGCACCACCGACACCCCACCAATCTCTTCCTCTTCAACACCCTCATACGATGCGCTCCGCCTCAACATTCCATCTCCATTTTCGCCAATTCGGTCTCCACTGCTCACTTCCAATTCGACGATTTCACTTTCATTTTCCTGCTCGGAGCTTGCGCGCGGGCTCCATCGCCGCCGACGTTAACCACCGGCAAGCAGATTCATACTCATATTCTCAAACGTGGGGTTGTTTCAAACATTTGGGTGCAGACTACCATGATTCATTTTTACGCGATTAACAAAGATGTGGGTGCTGCACGGAAGGTGTTCGATGAAATGCCTGTGAGAAATAATGTTACCTGGAATGCGATGATTGCAGGGTACTGCTCACAAAGTGGAAGGGTGGCTCATAAATATGGTCTAGAAGCGTTGGATTTGTTTCGGGCGATGTTGGTTGAATCAACGAATTCTGATGTCAATCCAACGGATACTACAATGGTCTGTCTTCTTTCAGCTGCATCTCAACTGGGTGTGCTTGAAACCGGCGTTTGCGTTCATGCATACATCGAGAAAACAATTGATTCCCCTGAAAATGATGTGTTTATTGGTACTGGTTTGGTTAATATGTACTCAAAATGTGGGTGTCTCAACAGTGCTTCATCAGTTTTTAAGCAGATGAAGCAGAGGAACGTTTTGACATGGACAGCGATGGCGACAGGGTTGGCCATTCATGGAAAGGGTAAAGAAGCATTGGAGCTTTTGGAAGCAATGGGAGGTCATGGTGTAAAGCCAAACGCAGTAACCTTCACAAGTCTACTTTCTGGTTGCTGTCATGGGGGGCTTATCGAAGAGGGGCTCCATTTGTTTGATGTAATGGAGAGGAAGTTCGGTGTTGTGCCACAAATGCAGCATTATGGCTGCATTGTTGACCTTCTTGGGCGGTGTGGGCACTTGAAAGAGGCATATGAGCTGATACTTGGGATGCCAATGGCGCCTGATGGTGTGTTATGGAGGAGTTTGATGAGTTCTTGTATGGTTCATTGCGATGTTGAAATGGGAGAGAAGGTGGGGAAGTTCCTTGTGGAGAGTGTTGTTGGTGATGAGTGGTGTGATGGAAGTGAGGACTTTGTAGCTTTGTCGAATGTTTATGCTTCTGCTCAAAGGTGGGAGAATGTGAAGGCTGTAAGAGAGGAGATGAAGATCAAAGGGATTCAAAACAAAGCCGGTCGTCAAAAGAGGCCAGCAGATCGTCGAAGTAAAACCGCAGGTGTGACTAAAGGATTAGTTGCTGAAAGAGTTCTTTCCACAATGGTCAATTCTGATAAAGCACCCGACTTTGTGATGTGCATTGGAGACGATCGATCCGATGAAGATATGTTTGAGAGCATATTGAGTAGAAGCTATAGCTTATCCCTTGCTACGCCCCCGATGATATTTGCCTGTACTGTGGGACAAAAGCCTAGCAAAGCCAAATACTATTTAGACGATACCGCAGATGTTTTGACCTTGCTTCAAGCCTGGCCAACTGTTCTAGTAGCCGTAAACTGA

Protein sequence

MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAYAHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAPSPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGVCVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAIHGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQHYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVESVVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAGRQKRPADRRSKTAGVTKGLVAERVLSTMVNSDKAPDFVMCIGDDRSDEDMFESILSRSYSLSLATPPMIFACTVGQKPSKAKYYLDDTADVLTLLQAWPTVLVAVN

Homology

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BLAST of Csor.00g238560 vs. ExPASy Swiss-Prot
Match: Q9LJ69 (Pentatricopeptide repeat-containing protein At3g18970 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E93 PE=2 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 2.7e-119
Identity = 229/454 (50.44%), Postives = 306/454 (67.40%), Query Frame = 0


Query: 18  NSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATA-YAHSISLHHRHPTNLFL 77
           + +L+Q KQIHAQL+ N     S + KLI H+C+K S E+++  AH +        + FL
Sbjct: 18  SKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFL 77

Query: 78  FNTLIRCAPPQHSISIFANSVSTAHFQF-DDFTFIFLLGACARAPSPPTLTTGKQIHTHI 137
           FNTL++C+ P+ SI IFAN  S +   + ++ TF+F+LGACAR+ S   L  G+ +H  +
Sbjct: 78  FNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMV 137

Query: 138 LKRG-VVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMIAGYCSQSGRVAH 197
            K G +  +  + TT++HFYA N D+  ARKVFDEMP R +VTWNAMI GYCS   +  H
Sbjct: 138 KKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNH 197

Query: 198 KYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGVCVHAYIEKTIDSPE 257
               +A+ LFR        S V PTDTTMVC+LSA SQ G+LE G  VH YIEK   +PE
Sbjct: 198 N-ARKAMVLFRRF--SCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPE 257

Query: 258 NDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAIHGKGKEALELLEAM 317
            DVFIGT LV+MYSKCGCLN+A SVF+ MK +NV TWT+MATGLA++G+G E   LL  M
Sbjct: 258 VDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM 317

Query: 318 GGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQHYGCIVDLLGRCGH 377
              G+KPN +TFTSLLS   H GL+EEG+ LF  M+ +FGV P ++HYGCIVDLLG+ G 
Sbjct: 318 AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGR 377

Query: 378 LKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVESVVGDEWCDGS--ED 437
           ++EAY+ IL MP+ PD +L RSL ++C ++ +  MGE++GK L+E    DE   GS  ED
Sbjct: 378 IQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECED 437

Query: 438 FVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 467
           +VALSNV A   +W  V+ +R+EMK + I+ + G
Sbjct: 438 YVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPG 468

[Close]

BLAST of Csor.00g238560 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 261.9 bits (668), Expect = 1.7e-68
Identity = 164/465 (35.27%), Postives = 268/465 (57.63%), Query Frame = 0


Query: 9   CIHLLNNILNSSLLQLKQIHAQLITNAFK-SPSPYAK-LIAHFCNKHSPEATAYAHSISL 68
           CI+LL     SS+ +L+QIHA  I +    S +   K LI +  +  SP   +YAH +  
Sbjct: 18  CINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFS 77

Query: 69  HHRHPTNLFLFNTLIR-CAPPQHSISIFA---NSVSTAHFQFDDFTFIFLLGACARAPSP 128
               P N+F++NTLIR  A   +SIS F+       +   + D  T+ FL+ A     + 
Sbjct: 78  KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA---VTTM 137

Query: 129 PTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMI 188
             +  G+ IH+ +++ G  S I+VQ +++H YA   DV +A KVFD+MP ++ V WN++I
Sbjct: 138 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 197

Query: 189 AGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGVCV 248
            G+ +++G+       EAL    A+  E  +  + P   T+V LLSA +++G L  G  V
Sbjct: 198 NGF-AENGKPE-----EAL----ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 257

Query: 249 HAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAIHG 308
           H Y+ K       ++     L+++Y++CG +  A ++F +M  +N ++WT++  GLA++G
Sbjct: 258 HVYMIKV--GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 317

Query: 309 KGKEALELLEAM-GGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQH 368
            GKEA+EL + M    G+ P  +TF  +L  C H G+++EG   F  M  ++ + P+++H
Sbjct: 318 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 377

Query: 369 YGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVESV 428
           +GC+VDLL R G +K+AYE I  MPM P+ V+WR+L+ +C VH D ++ E    F    +
Sbjct: 378 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE----FARIQI 437

Query: 429 VGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 467
           +  E  + S D+V LSN+YAS QRW +V+ +R++M   G++   G
Sbjct: 438 LQLE-PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPG 462

[Close]

BLAST of Csor.00g238560 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 259.2 bits (661), Expect = 1.1e-67
Identity = 158/474 (33.33%), Postives = 252/474 (53.16%), Query Frame = 0


Query: 23  QLKQIHAQLITNAFKSPSPYAKLIAHFC-NKHSPEATAYAHSISLHHRHPTNLFLFNTLI 82
           +LKQIHA+++       S        FC +  S +   YA  +      P + FL+N +I
Sbjct: 29  ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP-DTFLWNLMI 88

Query: 83  R---CA-PPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAPSPPTLTTGKQIHTHILK 142
           R   C+  P+ S+ ++   + ++    + +TF  LL AC+   +    T   QIH  I K
Sbjct: 89  RGFSCSDEPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETT---QIHAQITK 148

Query: 143 RGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMIAGYCSQ--------- 202
            G  ++++   ++I+ YA+  +   A  +FD +P  ++V+WN++I GY            
Sbjct: 149 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 208

Query: 203 ----------------SGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQ 262
                           SG V      EAL LF     E  NSDV P + ++   LSA +Q
Sbjct: 209 FRKMAEKNAISWTTMISGYVQADMNKEALQLFH----EMQNSDVEPDNVSLANALSACAQ 268

Query: 263 LGVLETGVCVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWT 322
           LG LE G  +H+Y+ KT      D  +G  L++MY+KCG +  A  VFK +K+++V  WT
Sbjct: 269 LGALEQGKWIHSYLNKT--RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 328

Query: 323 AMATGLAIHGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERK 382
           A+ +G A HG G+EA+     M   G+KPN +TFT++L+ C + GL+EEG  +F  MER 
Sbjct: 329 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 388

Query: 383 FGVVPQMQHYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEK 442
           + + P ++HYGCIVDLLGR G L EA   I  MP+ P+ V+W +L+ +C +H ++E+GE+
Sbjct: 389 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 448

Query: 443 VGKFLVESVVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 467
           +G+ L+     D +  G   +V  +N++A  ++W+     R  MK +G+    G
Sbjct: 449 IGEILIAI---DPYHGGR--YVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486

[Close]

BLAST of Csor.00g238560 vs. ExPASy Swiss-Prot
Match: Q9FIF7 (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 2.4e-67
Identity = 164/495 (33.13%), Postives = 266/495 (53.74%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           + LS R + I +L +  N  +  +  IHA++I       +     +   C+  + ++  Y
Sbjct: 24  LRLSRRKTLISVLRSCKN--IAHVPSIHAKIIRTFHDQDAFVVFELIRVCS--TLDSVDY 83

Query: 61  AHSISLHHRHPTNLFLFNTLI----RCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGAC 120
           A+ +  +  +P N++L+  +I            +S++   +  +    D++    +L AC
Sbjct: 84  AYDVFSYVSNP-NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLP-DNYVITSVLKAC 143

Query: 121 ARAPSPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNV 180
                   L   ++IH  +LK G  S+  V   M+  Y  + ++  A+K+FDEMP R++V
Sbjct: 144 -------DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 203

Query: 181 TWNAMI-----AGYCSQS--------------------GRVAHKYGLEALDLFRAMLVES 240
               MI      G+  ++                    G V +K   +AL+LFR M +E 
Sbjct: 204 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME- 263

Query: 241 TNSDVNPTDTTMVCLLSAASQLGVLETGVCVHAYIEKTIDSPENDVFIGTGLVNMYSKCG 300
              +V+  + T VC+LSA S LG LE G  VH+++E      E   F+G  L+NMYS+CG
Sbjct: 264 ---NVSANEFTAVCVLSACSDLGALELGRWVHSFVEN--QRMELSNFVGNALINMYSRCG 323

Query: 301 CLNSASSVFKQMKQRNVLTWTAMATGLAIHGKGKEALELLEAMGGHGVKPNAVTFTSLLS 360
            +N A  VF+ M+ ++V+++  M +GLA+HG   EA+     M   G +PN VT  +LL+
Sbjct: 324 DINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLN 383

Query: 361 GCCHGGLIEEGLHLFDVMERKFGVVPQMQHYGCIVDLLGRCGHLKEAYELILGMPMAPDG 420
            C HGGL++ GL +F+ M+R F V PQ++HYGCIVDLLGR G L+EAY  I  +P+ PD 
Sbjct: 384 ACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDH 443

Query: 421 VLWRSLMSSCMVHCDVEMGEKVGKFLVESVVGDEWCDGSEDFVALSNVYASAQRWENVKA 467
           ++  +L+S+C +H ++E+GEK+ K L ES   D     S  +V LSN+YAS+ +W+    
Sbjct: 444 IMLGTLLSACKIHGNMELGEKIAKRLFESENPD-----SGTYVLLSNLYASSGKWKESTE 494

[Close]

BLAST of Csor.00g238560 vs. ExPASy Swiss-Prot
Match: Q9SZT8 (Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ELI1 PE=3 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 7.0e-67
Identity = 163/480 (33.96%), Postives = 250/480 (52.08%), Query Frame = 0


Query: 18  NSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAYAHSISLHHRH-PTNLFL 77
           + S+ ++ QIHA ++ +       Y  L       ++       HS++L H+    +LFL
Sbjct: 39  SQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHG-KIRHSLALFHQTIDPDLFL 98

Query: 78  FNTLIRCAP----PQHSISIFANSVSTAHFQFDDFTFIFLLGACARAPSPPTLTTGKQIH 137
           F   I  A        +  ++   +S +    ++FTF  LL +C       +  +GK IH
Sbjct: 99  FTAAINTASINGLKDQAFLLYVQLLS-SEINPNEFTFSSLLKSC-------STKSGKLIH 158

Query: 138 THILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMIAGYCSQ---- 197
           TH+LK G+  + +V T ++  YA   DV +A+KVFD MP R+ V+  AMI  Y  Q    
Sbjct: 159 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 218

Query: 198 ---------------------SGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLL 257
                                 G   H +  +AL LF+ +L E       P + T+V  L
Sbjct: 219 AARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE---GKPKPDEITVVAAL 278

Query: 258 SAASQLGVLETGVCVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRN 317
           SA SQ+G LETG  +H +++ +      +V + TGL++MYSKCG L  A  VF    +++
Sbjct: 279 SACSQIGALETGRWIHVFVKSS--RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKD 338

Query: 318 VLTWTAMATGLAIHGKGKEALELLEAMGG-HGVKPNAVTFTSLLSGCCHGGLIEEGLHLF 377
           ++ W AM  G A+HG  ++AL L   M G  G++P  +TF   L  C H GL+ EG+ +F
Sbjct: 339 IVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 398

Query: 378 DVMERKFGVVPQMQHYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCD 437
           + M +++G+ P+++HYGC+V LLGR G LK AYE I  M M  D VLW S++ SC +H D
Sbjct: 399 ESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 458

Query: 438 VEMGEKVGKFLVESVVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 467
             +G+++ ++L+   +       S  +V LSN+YAS   +E V  VR  MK KGI  + G
Sbjct: 459 FVLGKEIAEYLIGLNI-----KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499

[Close]

BLAST of Csor.00g238560 vs. NCBI nr
Match: KAG6590320.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1154 bits (2985), Expect = 0.0
Identity = 572/572 (100.00%), Postives = 572/572 (100.00%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA
Sbjct: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV
Sbjct: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI
Sbjct: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ
Sbjct: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES
Sbjct: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420

Query: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAGRQKRPADRRSKTAG 480
           VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAGRQKRPADRRSKTAG
Sbjct: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAGRQKRPADRRSKTAG 480

Query: 481 VTKGLVAERVLSTMVNSDKAPDFVMCIGDDRSDEDMFESILSRSYSLSLATPPMIFACTV 540
           VTKGLVAERVLSTMVNSDKAPDFVMCIGDDRSDEDMFESILSRSYSLSLATPPMIFACTV
Sbjct: 481 VTKGLVAERVLSTMVNSDKAPDFVMCIGDDRSDEDMFESILSRSYSLSLATPPMIFACTV 540

Query: 541 GQKPSKAKYYLDDTADVLTLLQAWPTVLVAVN 572
           GQKPSKAKYYLDDTADVLTLLQAWPTVLVAVN
Sbjct: 541 GQKPSKAKYYLDDTADVLTLLQAWPTVLVAVN 572

[Close]

BLAST of Csor.00g238560 vs. NCBI nr
Match: KAG6590314.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 949 bits (2454), Expect = 0.0
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA
Sbjct: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV
Sbjct: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI
Sbjct: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ
Sbjct: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES
Sbjct: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420

Query: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
           VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG
Sbjct: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466

[Close]

BLAST of Csor.00g238560 vs. NCBI nr
Match: XP_022961039.1 (pentatricopeptide repeat-containing protein At3g18970 isoform X1 [Cucurbita moschata])

HSP 1 Score: 947 bits (2448), Expect = 0.0
Identity = 465/466 (99.79%), Postives = 465/466 (99.79%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA
Sbjct: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV
Sbjct: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSAS VFKQMKQRNVLTWTAMATGLAI
Sbjct: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASLVFKQMKQRNVLTWTAMATGLAI 300

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ
Sbjct: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES
Sbjct: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420

Query: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
           VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG
Sbjct: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466

[Close]

BLAST of Csor.00g238560 vs. NCBI nr
Match: XP_022961040.1 (pentatricopeptide repeat-containing protein At3g18970 isoform X2 [Cucurbita moschata])

HSP 1 Score: 947 bits (2448), Expect = 0.0
Identity = 465/466 (99.79%), Postives = 465/466 (99.79%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA
Sbjct: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV
Sbjct: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSAS VFKQMKQRNVLTWTAMATGLAI
Sbjct: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASLVFKQMKQRNVLTWTAMATGLAI 300

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ
Sbjct: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES
Sbjct: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420

Query: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
           VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG
Sbjct: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466

[Close]

BLAST of Csor.00g238560 vs. NCBI nr
Match: KAG7023914.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 940 bits (2429), Expect = 0.0
Identity = 462/466 (99.14%), Postives = 463/466 (99.36%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHL PRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHS EATAY
Sbjct: 1   MHLYPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSLEATAY 60

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AHSISLHHRHPTNLFLFNTLIRCAPPQHSI IFANSVSTAHFQFDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSIFIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA
Sbjct: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSGRVAHKYGL+ALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV
Sbjct: 181 MIAGYCSQSGRVAHKYGLDALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI
Sbjct: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ
Sbjct: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES
Sbjct: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420

Query: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
           VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG
Sbjct: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466

[Close]

BLAST of Csor.00g238560 vs. ExPASy TrEMBL
Match: A0A6J1HAU4 (pentatricopeptide repeat-containing protein At3g18970 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461664 PE=4 SV=1)

HSP 1 Score: 947 bits (2448), Expect = 0.0
Identity = 465/466 (99.79%), Postives = 465/466 (99.79%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA
Sbjct: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV
Sbjct: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSAS VFKQMKQRNVLTWTAMATGLAI
Sbjct: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASLVFKQMKQRNVLTWTAMATGLAI 300

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ
Sbjct: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES
Sbjct: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420

Query: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
           VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG
Sbjct: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466

[Close]

BLAST of Csor.00g238560 vs. ExPASy TrEMBL
Match: A0A6J1HCU6 (pentatricopeptide repeat-containing protein At3g18970 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461664 PE=4 SV=1)

HSP 1 Score: 947 bits (2448), Expect = 0.0
Identity = 465/466 (99.79%), Postives = 465/466 (99.79%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY
Sbjct: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP
Sbjct: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA
Sbjct: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV
Sbjct: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSAS VFKQMKQRNVLTWTAMATGLAI
Sbjct: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASLVFKQMKQRNVLTWTAMATGLAI 300

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ
Sbjct: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES
Sbjct: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420

Query: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
           VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG
Sbjct: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466

[Close]

BLAST of Csor.00g238560 vs. ExPASy TrEMBL
Match: A0A6J1JKN4 (pentatricopeptide repeat-containing protein At3g18970 OS=Cucurbita maxima OX=3661 GN=LOC111485442 PE=4 SV=1)

HSP 1 Score: 922 bits (2384), Expect = 0.0
Identity = 452/466 (97.00%), Postives = 458/466 (98.28%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHLSPRLSCIH LNNILNSSLLQLKQI AQLITNAFKSPSPYAKLIAHFCNKHSP+ATAY
Sbjct: 1   MHLSPRLSCIHHLNNILNSSLLQLKQIQAQLITNAFKSPSPYAKLIAHFCNKHSPQATAY 60

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AH ISLHHRHPTNLFLFNTLIRCAPPQHSISIFANS+STAHF+FDDFTFIFLLGACARAP
Sbjct: 61  AHLISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSLSTAHFEFDDFTFIFLLGACARAP 120

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           SPPTLTTGKQIHTH+LKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEM VRNNVTWNA
Sbjct: 121 SPPTLTTGKQIHTHVLKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMSVRNNVTWNA 180

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSGRVA KYG EAL+LFR MLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV
Sbjct: 181 MIAGYCSQSGRVAQKYGREALELFRGMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYIEKT DSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI
Sbjct: 241 CVHAYIEKTTDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ
Sbjct: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGRCGHLKEAYELILGMP+APDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES
Sbjct: 361 HYGCIVDLLGRCGHLKEAYELILGMPVAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420

Query: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
           VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG
Sbjct: 421 VVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466

[Close]

BLAST of Csor.00g238560 vs. ExPASy TrEMBL
Match: A0A5D3CFP0 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003250 PE=4 SV=1)

HSP 1 Score: 769 bits (1985), Expect = 1.27e-275
Identity = 381/470 (81.06%), Postives = 418/470 (88.94%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHL+PRLSCI+ L+NI  SSL QL QIHAQ ITN FKSPSPYAKLI H C K S E+ A+
Sbjct: 9   MHLAPRLSCINHLSNIRISSL-QLLQIHAQFITNGFKSPSPYAKLITHLCKKSSSESIAH 68

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AH I  HH+H  NLFLFNTLIRCAPPQ+SISIFAN VST HF+FDDFTFIF+LGACARAP
Sbjct: 69  AHLIFRHHQHSPNLFLFNTLIRCAPPQYSISIFANWVSTPHFEFDDFTFIFVLGACARAP 128

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           S  TL  G+QIHTHILKRG+VSNIW QTTMIHFY+ NKDVG+ARKVFDEM VRN+VTWNA
Sbjct: 129 SVSTLMIGRQIHTHILKRGIVSNIWAQTTMIHFYSTNKDVGSARKVFDEMSVRNSVTWNA 188

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSG+V+ KY  +AL+LFR MLVESTN +V PTDTTMVC+LSAAS LG+LETGV
Sbjct: 189 MIAGYCSQSGKVSQKYARDALELFRGMLVESTNFEVKPTDTTMVCILSAASHLGMLETGV 248

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYI+KTIDSPE DVFIGTGLVNMYSKCG L+SASSVFKQMKQRNVLTWT+MATGLA+
Sbjct: 249 CVHAYIKKTIDSPEKDVFIGTGLVNMYSKCGLLSSASSVFKQMKQRNVLTWTSMATGLAV 308

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HG+GKEALELL+AMG HGVKPNAVTFTSLLS CCHGGLIEEGLHLF VMERKFGVVPQMQ
Sbjct: 309 HGRGKEALELLDAMGAHGVKPNAVTFTSLLSACCHGGLIEEGLHLFRVMERKFGVVPQMQ 368

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGR GHL+EAYELIL MPM PDGVLWRSL+SSCM+H DVEMGE+VGK LVE 
Sbjct: 369 HYGCIVDLLGRSGHLREAYELILEMPMEPDGVLWRSLLSSCMLHGDVEMGERVGKLLVER 428

Query: 421 VVG----DEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
             G    DEWC GSEDFVALSNVYASA+RW++V+A+REEMKIKGI+NKAG
Sbjct: 429 QGGESFDDEWCVGSEDFVALSNVYASAERWDDVEALREEMKIKGIENKAG 477

[Close]

BLAST of Csor.00g238560 vs. ExPASy TrEMBL
Match: A0A1S3BPA5 (pentatricopeptide repeat-containing protein At3g18970 OS=Cucumis melo OX=3656 GN=LOC103492230 PE=4 SV=1)

HSP 1 Score: 769 bits (1985), Expect = 1.27e-275
Identity = 381/470 (81.06%), Postives = 418/470 (88.94%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           MHL+PRLSCI+ L+NI  SSL QL QIHAQ ITN FKSPSPYAKLI H C K S E+ A+
Sbjct: 9   MHLAPRLSCINHLSNIRISSL-QLLQIHAQFITNGFKSPSPYAKLITHLCKKSSSESIAH 68

Query: 61  AHSISLHHRHPTNLFLFNTLIRCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAP 120
           AH I  HH+H  NLFLFNTLIRCAPPQ+SISIFAN VST HF+FDDFTFIF+LGACARAP
Sbjct: 69  AHLIFRHHQHSPNLFLFNTLIRCAPPQYSISIFANWVSTPHFEFDDFTFIFVLGACARAP 128

Query: 121 SPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNA 180
           S  TL  G+QIHTHILKRG+VSNIW QTTMIHFY+ NKDVG+ARKVFDEM VRN+VTWNA
Sbjct: 129 SVSTLMIGRQIHTHILKRGIVSNIWAQTTMIHFYSTNKDVGSARKVFDEMSVRNSVTWNA 188

Query: 181 MIAGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGV 240
           MIAGYCSQSG+V+ KY  +AL+LFR MLVESTN +V PTDTTMVC+LSAAS LG+LETGV
Sbjct: 189 MIAGYCSQSGKVSQKYARDALELFRGMLVESTNFEVKPTDTTMVCILSAASHLGMLETGV 248

Query: 241 CVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAI 300
           CVHAYI+KTIDSPE DVFIGTGLVNMYSKCG L+SASSVFKQMKQRNVLTWT+MATGLA+
Sbjct: 249 CVHAYIKKTIDSPEKDVFIGTGLVNMYSKCGLLSSASSVFKQMKQRNVLTWTSMATGLAV 308

Query: 301 HGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQ 360
           HG+GKEALELL+AMG HGVKPNAVTFTSLLS CCHGGLIEEGLHLF VMERKFGVVPQMQ
Sbjct: 309 HGRGKEALELLDAMGAHGVKPNAVTFTSLLSACCHGGLIEEGLHLFRVMERKFGVVPQMQ 368

Query: 361 HYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVES 420
           HYGCIVDLLGR GHL+EAYELIL MPM PDGVLWRSL+SSCM+H DVEMGE+VGK LVE 
Sbjct: 369 HYGCIVDLLGRSGHLREAYELILEMPMEPDGVLWRSLLSSCMLHGDVEMGERVGKLLVER 428

Query: 421 VVG----DEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 466
             G    DEWC GSEDFVALSNVYASA+RW++V+A+REEMKIKGI+NKAG
Sbjct: 429 QGGESFDDEWCVGSEDFVALSNVYASAERWDDVEALREEMKIKGIENKAG 477

[Close]

BLAST of Csor.00g238560 vs. TAIR 10
Match: AT3G18970.1 (mitochondrial editing factor 20 )

HSP 1 Score: 430.6 bits (1106), Expect = 1.9e-120
Identity = 229/454 (50.44%), Postives = 306/454 (67.40%), Query Frame = 0


Query: 18  NSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATA-YAHSISLHHRHPTNLFL 77
           + +L+Q KQIHAQL+ N     S + KLI H+C+K S E+++  AH +        + FL
Sbjct: 18  SKTLIQAKQIHAQLVINGCHDNSLFGKLIGHYCSKPSTESSSKLAHLLVFPRFGHPDKFL 77

Query: 78  FNTLIRCAPPQHSISIFANSVSTAHFQF-DDFTFIFLLGACARAPSPPTLTTGKQIHTHI 137
           FNTL++C+ P+ SI IFAN  S +   + ++ TF+F+LGACAR+ S   L  G+ +H  +
Sbjct: 78  FNTLLKCSKPEDSIRIFANYASKSSLLYLNERTFVFVLGACARSASSSALRVGRIVHGMV 137

Query: 138 LKRG-VVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMIAGYCSQSGRVAH 197
            K G +  +  + TT++HFYA N D+  ARKVFDEMP R +VTWNAMI GYCS   +  H
Sbjct: 138 KKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHKDKGNH 197

Query: 198 KYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGVCVHAYIEKTIDSPE 257
               +A+ LFR        S V PTDTTMVC+LSA SQ G+LE G  VH YIEK   +PE
Sbjct: 198 N-ARKAMVLFRRF--SCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFTPE 257

Query: 258 NDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAIHGKGKEALELLEAM 317
            DVFIGT LV+MYSKCGCLN+A SVF+ MK +NV TWT+MATGLA++G+G E   LL  M
Sbjct: 258 VDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLNRM 317

Query: 318 GGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQHYGCIVDLLGRCGH 377
              G+KPN +TFTSLLS   H GL+EEG+ LF  M+ +FGV P ++HYGCIVDLLG+ G 
Sbjct: 318 AESGIKPNEITFTSLLSAYRHIGLVEEGIELFKSMKTRFGVTPVIEHYGCIVDLLGKAGR 377

Query: 378 LKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVESVVGDEWCDGS--ED 437
           ++EAY+ IL MP+ PD +L RSL ++C ++ +  MGE++GK L+E    DE   GS  ED
Sbjct: 378 IQEAYQFILAMPIKPDAILLRSLCNACSIYGETVMGEEIGKALLEIEREDEKLSGSECED 437

Query: 438 FVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 467
           +VALSNV A   +W  V+ +R+EMK + I+ + G
Sbjct: 438 YVALSNVLAHKGKWVEVEKLRKEMKERRIKTRPG 468

[Close]

BLAST of Csor.00g238560 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 261.9 bits (668), Expect = 1.2e-69
Identity = 164/465 (35.27%), Postives = 268/465 (57.63%), Query Frame = 0


Query: 9   CIHLLNNILNSSLLQLKQIHAQLITNAFK-SPSPYAK-LIAHFCNKHSPEATAYAHSISL 68
           CI+LL     SS+ +L+QIHA  I +    S +   K LI +  +  SP   +YAH +  
Sbjct: 18  CINLLQTYGVSSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFS 77

Query: 69  HHRHPTNLFLFNTLIR-CAPPQHSISIFA---NSVSTAHFQFDDFTFIFLLGACARAPSP 128
               P N+F++NTLIR  A   +SIS F+       +   + D  T+ FL+ A     + 
Sbjct: 78  KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA---VTTM 137

Query: 129 PTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMI 188
             +  G+ IH+ +++ G  S I+VQ +++H YA   DV +A KVFD+MP ++ V WN++I
Sbjct: 138 ADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVI 197

Query: 189 AGYCSQSGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQLGVLETGVCV 248
            G+ +++G+       EAL    A+  E  +  + P   T+V LLSA +++G L  G  V
Sbjct: 198 NGF-AENGKPE-----EAL----ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRV 257

Query: 249 HAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWTAMATGLAIHG 308
           H Y+ K       ++     L+++Y++CG +  A ++F +M  +N ++WT++  GLA++G
Sbjct: 258 HVYMIKV--GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNG 317

Query: 309 KGKEALELLEAM-GGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERKFGVVPQMQH 368
            GKEA+EL + M    G+ P  +TF  +L  C H G+++EG   F  M  ++ + P+++H
Sbjct: 318 FGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEH 377

Query: 369 YGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEKVGKFLVESV 428
           +GC+VDLL R G +K+AYE I  MPM P+ V+WR+L+ +C VH D ++ E    F    +
Sbjct: 378 FGCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE----FARIQI 437

Query: 429 VGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 467
           +  E  + S D+V LSN+YAS QRW +V+ +R++M   G++   G
Sbjct: 438 LQLE-PNHSGDYVLLSNMYASEQRWSDVQKIRKQMLRDGVKKVPG 462

[Close]

BLAST of Csor.00g238560 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 259.2 bits (661), Expect = 7.7e-69
Identity = 158/474 (33.33%), Postives = 252/474 (53.16%), Query Frame = 0


Query: 23  QLKQIHAQLITNAFKSPSPYAKLIAHFC-NKHSPEATAYAHSISLHHRHPTNLFLFNTLI 82
           +LKQIHA+++       S        FC +  S +   YA  +      P + FL+N +I
Sbjct: 29  ELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP-DTFLWNLMI 88

Query: 83  R---CA-PPQHSISIFANSVSTAHFQFDDFTFIFLLGACARAPSPPTLTTGKQIHTHILK 142
           R   C+  P+ S+ ++   + ++    + +TF  LL AC+   +    T   QIH  I K
Sbjct: 89  RGFSCSDEPERSLLLYQRMLCSS-APHNAYTFPSLLKACSNLSAFEETT---QIHAQITK 148

Query: 143 RGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMIAGYCSQ--------- 202
            G  ++++   ++I+ YA+  +   A  +FD +P  ++V+WN++I GY            
Sbjct: 149 LGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTL 208

Query: 203 ----------------SGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLLSAASQ 262
                           SG V      EAL LF     E  NSDV P + ++   LSA +Q
Sbjct: 209 FRKMAEKNAISWTTMISGYVQADMNKEALQLFH----EMQNSDVEPDNVSLANALSACAQ 268

Query: 263 LGVLETGVCVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRNVLTWT 322
           LG LE G  +H+Y+ KT      D  +G  L++MY+KCG +  A  VFK +K+++V  WT
Sbjct: 269 LGALEQGKWIHSYLNKT--RIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWT 328

Query: 323 AMATGLAIHGKGKEALELLEAMGGHGVKPNAVTFTSLLSGCCHGGLIEEGLHLFDVMERK 382
           A+ +G A HG G+EA+     M   G+KPN +TFT++L+ C + GL+EEG  +F  MER 
Sbjct: 329 ALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERD 388

Query: 383 FGVVPQMQHYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCDVEMGEK 442
           + + P ++HYGCIVDLLGR G L EA   I  MP+ P+ V+W +L+ +C +H ++E+GE+
Sbjct: 389 YNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELGEE 448

Query: 443 VGKFLVESVVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 467
           +G+ L+     D +  G   +V  +N++A  ++W+     R  MK +G+    G
Sbjct: 449 IGEILIAI---DPYHGGR--YVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486

[Close]

BLAST of Csor.00g238560 vs. TAIR 10
Match: AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 258.1 bits (658), Expect = 1.7e-68
Identity = 164/495 (33.13%), Postives = 266/495 (53.74%), Query Frame = 0


Query: 1   MHLSPRLSCIHLLNNILNSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAY 60
           + LS R + I +L +  N  +  +  IHA++I       +     +   C+  + ++  Y
Sbjct: 24  LRLSRRKTLISVLRSCKN--IAHVPSIHAKIIRTFHDQDAFVVFELIRVCS--TLDSVDY 83

Query: 61  AHSISLHHRHPTNLFLFNTLI----RCAPPQHSISIFANSVSTAHFQFDDFTFIFLLGAC 120
           A+ +  +  +P N++L+  +I            +S++   +  +    D++    +L AC
Sbjct: 84  AYDVFSYVSNP-NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLP-DNYVITSVLKAC 143

Query: 121 ARAPSPPTLTTGKQIHTHILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNV 180
                   L   ++IH  +LK G  S+  V   M+  Y  + ++  A+K+FDEMP R++V
Sbjct: 144 -------DLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHV 203

Query: 181 TWNAMI-----AGYCSQS--------------------GRVAHKYGLEALDLFRAMLVES 240
               MI      G+  ++                    G V +K   +AL+LFR M +E 
Sbjct: 204 AATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME- 263

Query: 241 TNSDVNPTDTTMVCLLSAASQLGVLETGVCVHAYIEKTIDSPENDVFIGTGLVNMYSKCG 300
              +V+  + T VC+LSA S LG LE G  VH+++E      E   F+G  L+NMYS+CG
Sbjct: 264 ---NVSANEFTAVCVLSACSDLGALELGRWVHSFVEN--QRMELSNFVGNALINMYSRCG 323

Query: 301 CLNSASSVFKQMKQRNVLTWTAMATGLAIHGKGKEALELLEAMGGHGVKPNAVTFTSLLS 360
            +N A  VF+ M+ ++V+++  M +GLA+HG   EA+     M   G +PN VT  +LL+
Sbjct: 324 DINEARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLN 383

Query: 361 GCCHGGLIEEGLHLFDVMERKFGVVPQMQHYGCIVDLLGRCGHLKEAYELILGMPMAPDG 420
            C HGGL++ GL +F+ M+R F V PQ++HYGCIVDLLGR G L+EAY  I  +P+ PD 
Sbjct: 384 ACSHGGLLDIGLEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDH 443

Query: 421 VLWRSLMSSCMVHCDVEMGEKVGKFLVESVVGDEWCDGSEDFVALSNVYASAQRWENVKA 467
           ++  +L+S+C +H ++E+GEK+ K L ES   D     S  +V LSN+YAS+ +W+    
Sbjct: 444 IMLGTLLSACKIHGNMELGEKIAKRLFESENPD-----SGTYVLLSNLYASSGKWKESTE 494

[Close]

BLAST of Csor.00g238560 vs. TAIR 10
Match: AT4G37380.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 256.5 bits (654), Expect = 5.0e-68
Identity = 163/480 (33.96%), Postives = 250/480 (52.08%), Query Frame = 0


Query: 18  NSSLLQLKQIHAQLITNAFKSPSPYAKLIAHFCNKHSPEATAYAHSISLHHRH-PTNLFL 77
           + S+ ++ QIHA ++ +       Y  L       ++       HS++L H+    +LFL
Sbjct: 39  SQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHG-KIRHSLALFHQTIDPDLFL 98

Query: 78  FNTLIRCAP----PQHSISIFANSVSTAHFQFDDFTFIFLLGACARAPSPPTLTTGKQIH 137
           F   I  A        +  ++   +S +    ++FTF  LL +C       +  +GK IH
Sbjct: 99  FTAAINTASINGLKDQAFLLYVQLLS-SEINPNEFTFSSLLKSC-------STKSGKLIH 158

Query: 138 THILKRGVVSNIWVQTTMIHFYAINKDVGAARKVFDEMPVRNNVTWNAMIAGYCSQ---- 197
           TH+LK G+  + +V T ++  YA   DV +A+KVFD MP R+ V+  AMI  Y  Q    
Sbjct: 159 THVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVE 218

Query: 198 ---------------------SGRVAHKYGLEALDLFRAMLVESTNSDVNPTDTTMVCLL 257
                                 G   H +  +AL LF+ +L E       P + T+V  L
Sbjct: 219 AARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAE---GKPKPDEITVVAAL 278

Query: 258 SAASQLGVLETGVCVHAYIEKTIDSPENDVFIGTGLVNMYSKCGCLNSASSVFKQMKQRN 317
           SA SQ+G LETG  +H +++ +      +V + TGL++MYSKCG L  A  VF    +++
Sbjct: 279 SACSQIGALETGRWIHVFVKSS--RIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKD 338

Query: 318 VLTWTAMATGLAIHGKGKEALELLEAMGG-HGVKPNAVTFTSLLSGCCHGGLIEEGLHLF 377
           ++ W AM  G A+HG  ++AL L   M G  G++P  +TF   L  C H GL+ EG+ +F
Sbjct: 339 IVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIF 398

Query: 378 DVMERKFGVVPQMQHYGCIVDLLGRCGHLKEAYELILGMPMAPDGVLWRSLMSSCMVHCD 437
           + M +++G+ P+++HYGC+V LLGR G LK AYE I  M M  D VLW S++ SC +H D
Sbjct: 399 ESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGD 458

Query: 438 VEMGEKVGKFLVESVVGDEWCDGSEDFVALSNVYASAQRWENVKAVREEMKIKGIQNKAG 467
             +G+++ ++L+   +       S  +V LSN+YAS   +E V  VR  MK KGI  + G
Sbjct: 459 FVLGKEIAEYLIGLNI-----KNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPG 499

The following BLAST results are available for this feature:

BLAST of Csor.00g238560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LJ69	2.7e-119	50.44	Pentatricopeptide repeat-containing protein At3g18970 OS=Arabidopsis thaliana OX...	[more]
A8MQA3	1.7e-68	35.27	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]
Q9FJY7	1.1e-67	33.33	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9FIF7	2.4e-67	33.13	Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS...	[more]
Q9SZT8	7.0e-67	33.96	Pentatricopeptide repeat-containing protein ELI1, chloroplastic OS=Arabidopsis t...	[more]

BLAST of Csor.00g238560 vs. NCBI nr


Match Name	Identity	Description
KAG6590320.1	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
KAG6590314.1	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022961039.1	99.79	pentatricopeptide repeat-containing protein At3g18970 isoform X1 [Cucurbita mosc...	[more]
XP_022961040.1	99.79	pentatricopeptide repeat-containing protein At3g18970 isoform X2 [Cucurbita mosc...	[more]
KAG7023914.1	99.14	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]

BLAST of Csor.00g238560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAU4	0.0	99.79	pentatricopeptide repeat-containing protein At3g18970 isoform X2 OS=Cucurbita mo...	[more]
A0A6J1HCU6	0.0	99.79	pentatricopeptide repeat-containing protein At3g18970 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1JKN4	0.0	97.00	pentatricopeptide repeat-containing protein At3g18970 OS=Cucurbita maxima OX=366...	[more]
A0A5D3CFP0	1.27e-275	81.06	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BPA5	1.27e-275	81.06	pentatricopeptide repeat-containing protein At3g18970 OS=Cucumis melo OX=3656 GN...	[more]

BLAST of Csor.00g238560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18970.1	1.9e-120	50.44	mitochondrial editing factor 20	[more]
AT4G21065.1	1.2e-69	35.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G66520.1	7.7e-69	33.33	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G59200.1	1.7e-68	33.13	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G37380.1	5.0e-68	33.96	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003337	Trehalose-phosphatase	PFAM	PF02358	Trehalose_PPase	coord: 478..554 e-value: 1.3E-17 score: 63.7
IPR023214	HAD superfamily	GENE3D	3.40.50.1000		coord: 438..569 e-value: 8.2E-16 score: 60.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 254..385 e-value: 1.2E-30 score: 109.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 74..253 e-value: 1.2E-22 score: 82.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 324..357 e-value: 1.1E-6 score: 26.4 coord: 148..172 e-value: 0.0019 score: 16.2 coord: 290..323 e-value: 0.0026 score: 15.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 286..335 e-value: 3.4E-11 score: 43.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 362..385 e-value: 1.3 score: 9.4 coord: 176..187 e-value: 0.16 score: 12.3 coord: 148..173 e-value: 0.046 score: 14.0
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 287..321 score: 10.577712
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 322..352 score: 10.336563
None	No IPR available	PANTHER	PTHR47928:SF14	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 15..468
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 15..468
IPR036412	HAD-like superfamily	SUPERFAMILY	56784	HAD-like	coord: 478..564

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g238560.m01	Csor.00g238560.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005992	trehalose biosynthetic process
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0005515	protein binding