Csor.00g238260 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g238260
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor bHLH147-like
Location	Csor_Chr08: 8088553 .. 8089158 (+)
RNA-Seq Expression	Csor.00g238260
Synteny	Csor.00g238260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCATCTGTTCTTTCGAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTTCGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAATAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAAACAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCTGGTTGCCGGAAAGAACCTTGGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

mRNA sequence

ATGGCGTCATCTGTTCTTTCGAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTTCGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAATAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAAACAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCTGGTTGCCGGAAAGAACCTTGGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

Coding sequence (CDS)

ATGGCGTCATCTGTTCTTTCGAACTCCGATCGCATGCGGGAGTCTTCAAGGAAGCAAAAGAAGAAGAAAAACCACGGCAACAGAGACCGTCATCAAAACCAGAACCATATTAACTGGAAATCTCAAGCTCAGAAAGAAATTTACTCGTCTAAGCTGGTTCGAGCGTTGAATCAAGTGAGGCTCAGTCCTTCGAATGAGGCGCCCCGCCGTGGTAGAGCCGTACGCGAGGCCGCCGACAGAATCCTTGCCGTCGCCGCCAAGGGGAGAACCAGGTGGAGCCGAGCCATTCTAACGAATAGGTTGAAGCTCAAGTTCAGGAAGCCGAAGAAACAGAGAGCATCCACCGCTGGAAACAACCGCCCAAAGAAACCTAGAGTCAGCGTATTGCGGTTGAAAGGAAAAACGTTGCCGGCGGTGCAAAGGAAAGTTAGGGTTCTTGGACGGCTAGTTCCTGGTTGCCGGAAAGAACCTTGGCCGGTTATCCTAGAAGAGGCCACCGATTACATAGCTGCACTTGAAATGCAAGTTCGAGCTATGACTGCCCTCGCCGAGTTGCTCTCGGCCTCAACTTCTGTTGCAGGCTCTAGCTCCGCTCCTCCAAGCTGA

Protein sequence

MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMTALAELLSASTSVAGSSSAPPS

Homology

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BLAST of Csor.00g238260 vs. ExPASy Swiss-Prot
Match: Q9LSN7 (Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 5.2e-41
Identity = 109/198 (55.05%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 7   SNSDRMRESSRKQKKKKNHGNRDRHQNQNHI--NWKSQAQKEIYSSKLVRALNQVRL--- 66
           SNSDR R   RK+KKK +  + ++  + +     W+S+ Q++IYS+KLV AL ++R+   
Sbjct: 19  SNSDRSR---RKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQ 78

Query: 67  ---SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRAS---- 126
              S S+  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK K+QR S    
Sbjct: 79  PSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTT 138

Query: 127 ---TAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAA 186
              T G+ R KK R +VLRLK K LPAVQRKV+VL RLVPGCRK+  PV+LEE TDYIAA
Sbjct: 139 TTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAA 198

Query: 187 LEMQVRAMTALAELLSAS 190
           +EMQ+R MTA+   +S+S
Sbjct: 199 MEMQIRTMTAILSAVSSS 213

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BLAST of Csor.00g238260 vs. ExPASy Swiss-Prot
Match: Q9C8Z9 (Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-39
Identity = 111/214 (51.87%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 3   SSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       +  +      + H  W+S+ Q+ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTA 122
                S S  A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK ++ RA+ A
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 ----------GNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEAT 182
                      +NR +K RVSVLRL  K++P V RKVRVLGRLVPGC K+  PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 201
           DYI ALEMQVRAM +L +LLS+        SAPP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSS------YGSAPP 219

[Close]

BLAST of Csor.00g238260 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 2.9e-28
Identity = 91/202 (45.05%), Postives = 130/202 (64.36%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGN----RDRHQNQNHI-NWKSQAQKEIYSSKLVRA 60
           M  S+  + +   ESSR++K + +         R  N+  +  WK+   ++IY+ KLV A
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEA 60

Query: 61  LNQVR----LSPSNEAPR----RGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRK 120
           L +VR     + +NE  +      R +R+ ADR+LA +A+G TRWSRAIL +R++ K +K
Sbjct: 61  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKK 120

Query: 121 PKKQRASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATD 180
            +K + ST GN + +K      R+K   LPAV+RK+++LGRLVPGCRK   P +L+EATD
Sbjct: 121 HRKAKKST-GNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEATD 180

Query: 181 YIAALEMQVRAMTALAELLSAS 190
           YIAALEMQVRAM ALAELL+A+
Sbjct: 181 YIAALEMQVRAMEALAELLTAA 198

[Close]

BLAST of Csor.00g238260 vs. ExPASy Swiss-Prot
Match: Q9M9L6 (Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 5.9e-21
Identity = 66/154 (42.86%), Postives = 90/154 (58.44%), Query Frame = 0


Query: 39  WKSQAQKEIYSSKLVRALNQVRLSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILT 98
           W++   +++YS KL  AL         +  RR   VR+ AD++LA  A+G TRWSRAIL 
Sbjct: 63  WRATTAQKVYSLKLYDAL---------QRSRRSATVRDTADKVLATTARGATRWSRAILV 122

Query: 99  NRLKLKFRKPKKQRASTAGNNRPKKPRVSVLRLKG-----KTLPAVQRKVRVLGRLVPGC 158
           +R     R+ +        N +P     + +R  G     + L AV  +VRVLG LVPGC
Sbjct: 123 SRFGTSLRRRR--------NTKPASALAAAIRGSGGSGRRRKLSAVGNRVRVLGGLVPGC 182

Query: 159 RKEPWPVILEEATDYIAALEMQVRAMTALAELLS 188
           R+   P +L+E  DYIAALEMQVRAMTAL+++LS
Sbjct: 183 RRTALPELLDETADYIAALEMQVRAMTALSKILS 199

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BLAST of Csor.00g238260 vs. NCBI nr
Match: KAG6594020.1 (Transcription factor basic helix-loop-helix 147, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 364 bits (934), Expect = 2.99e-126
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180

Query: 181 ALAELLSASTSVAGSSSAPPS 201
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]

BLAST of Csor.00g238260 vs. NCBI nr
Match: KAG7026360.1 (Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 364 bits (934), Expect = 6.53e-126
Identity = 201/201 (100.00%), Postives = 201/201 (100.00%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 23  MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 82

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR
Sbjct: 83  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 142

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT
Sbjct: 143 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 202

Query: 181 ALAELLSASTSVAGSSSAPPS 201
           ALAELLSASTSVAGSSSAPPS
Sbjct: 203 ALAELLSASTSVAGSSSAPPS 223

[Close]

BLAST of Csor.00g238260 vs. NCBI nr
Match: XP_023514807.1 (transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >XP_023514808.1 transcription factor bHLH147-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 357 bits (917), Expect = 1.17e-123
Identity = 199/201 (99.00%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAM+
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMS 180

Query: 181 ALAELLSASTSVAGSSSAPPS 201
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]

BLAST of Csor.00g238260 vs. NCBI nr
Match: XP_022930482.1 (transcription factor bHLH147-like [Cucurbita moschata])

HSP 1 Score: 355 bits (912), Expect = 6.76e-123
Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAG NR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAMT
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180

Query: 181 ALAELLSASTSVAGSSSAPPS 201
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]

BLAST of Csor.00g238260 vs. NCBI nr
Match: XP_022999891.1 (transcription factor bHLH147-like [Cucurbita maxima])

HSP 1 Score: 347 bits (889), Expect = 2.16e-119
Identity = 194/200 (97.00%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQN INWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNLINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR STAGNNR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRVSTAGNNR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSV RLKGKTLPAVQRKVRVLGRLVP CRKEP PVILEEATDYIAALEMQVRAM+
Sbjct: 121 PKKPRVSVFRLKGKTLPAVQRKVRVLGRLVPSCRKEPLPVILEEATDYIAALEMQVRAMS 180

Query: 181 ALAELLSASTSVAGSSSAPP 200
           ALAELLSASTSVAGSSSAPP
Sbjct: 181 ALAELLSASTSVAGSSSAPP 200

[Close]

BLAST of Csor.00g238260 vs. ExPASy TrEMBL
Match: A0A6J1EQM7 (transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111436924 PE=4 SV=1)

HSP 1 Score: 355 bits (912), Expect = 3.27e-123
Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAG NR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGINR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAMT
Sbjct: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAMT 180

Query: 181 ALAELLSASTSVAGSSSAPPS 201
           ALAELLSASTSVAGSSSAPPS
Sbjct: 181 ALAELLSASTSVAGSSSAPPS 201

[Close]

BLAST of Csor.00g238260 vs. ExPASy TrEMBL
Match: A0A6J1KED1 (transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111494233 PE=4 SV=1)

HSP 1 Score: 347 bits (889), Expect = 1.05e-119
Identity = 194/200 (97.00%), Postives = 195/200 (97.50%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQN INWKSQAQKEIYSSKLVRALNQVR
Sbjct: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNLINWKSQAQKEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTAGNNR 120
           LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR STAGNNR
Sbjct: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRVSTAGNNR 120

Query: 121 PKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAMT 180
           PKKPRVSV RLKGKTLPAVQRKVRVLGRLVP CRKEP PVILEEATDYIAALEMQVRAM+
Sbjct: 121 PKKPRVSVFRLKGKTLPAVQRKVRVLGRLVPSCRKEPLPVILEEATDYIAALEMQVRAMS 180

Query: 181 ALAELLSASTSVAGSSSAPP 200
           ALAELLSASTSVAGSSSAPP
Sbjct: 181 ALAELLSASTSVAGSSSAPP 200

[Close]

BLAST of Csor.00g238260 vs. ExPASy TrEMBL
Match: A0A6J1H465 (transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111460328 PE=4 SV=1)

HSP 1 Score: 327 bits (838), Expect = 6.41e-112
Identity = 184/201 (91.54%), Postives = 192/201 (95.52%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSV SNSDR RESSR+QKKKK+HGNRD HQNQNHI WKSQAQ+EIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR-ASTAGNN 120
           LSP NEAPRRGRAVREAADR+LAVAAKGRTRWSRAILTNRLKLKFRKPK+QR ASTAGNN
Sbjct: 61  LSPPNEAPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKPKRQRSASTAGNN 120

Query: 121 RPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAM 180
           R KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 TALAELLSASTSVAGSSSAPP 200
           +ALAELLSASTS AGSSSAPP
Sbjct: 181 SALAELLSASTSAAGSSSAPP 201

[Close]

BLAST of Csor.00g238260 vs. ExPASy TrEMBL
Match: A0A6J1L1P5 (transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111499053 PE=4 SV=1)

HSP 1 Score: 323 bits (828), Expect = 2.14e-110
Identity = 182/201 (90.55%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVR 60
           MASSV SNSDR RESSR+QKKKK+HGNRD HQNQNHI WKSQAQ+EIYSSKLVRALNQVR
Sbjct: 1   MASSVHSNSDRARESSRRQKKKKSHGNRDHHQNQNHIKWKSQAQQEIYSSKLVRALNQVR 60

Query: 61  LSPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQR-ASTAGNN 120
           LSP NE PRRGRAVREAADR+LAVAAKGRTRWSRAIL NRLKLKFRKPK+QR ASTAGNN
Sbjct: 61  LSPPNEGPRRGRAVREAADRVLAVAAKGRTRWSRAILKNRLKLKFRKPKRQRSASTAGNN 120

Query: 121 RPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQVRAM 180
           R KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQVRAM
Sbjct: 121 RSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQVRAM 180

Query: 181 TALAELLSASTSVAGSSSAPP 200
           +ALAELLSASTS AGSSSAPP
Sbjct: 181 SALAELLSASTSAAGSSSAPP 201

[Close]

BLAST of Csor.00g238260 vs. ExPASy TrEMBL
Match: A0A0A0KCL4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1)

HSP 1 Score: 311 bits (798), Expect = 9.12e-106
Identity = 185/206 (89.81%), Postives = 194/206 (94.17%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESS-RKQKKKKNHGNRDRHQNQNH-INWKSQAQKEIYSSKLVRALNQ 60
           MASSVLSNSDR RESS RKQKKKK+HGNRD HQNQNH I WKSQAQ+EIYSSKLVRALNQ
Sbjct: 1   MASSVLSNSDRARESSSRKQKKKKSHGNRDHHQNQNHHIKWKSQAQQEIYSSKLVRALNQ 60

Query: 61  VRLSPSNEAP-RRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRK-PKKQRA-ST 120
           VRL PSNEAP RRGRAVREAADR+LAVAAKGRTRWSRAILTNRLKLKFRK PK+QR+ ST
Sbjct: 61  VRLGPSNEAPPRRGRAVREAADRVLAVAAKGRTRWSRAILTNRLKLKFRKAPKRQRSTST 120

Query: 121 AGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAALEMQ 180
           AGNNR KKPRVSVLRL+GK+LPAVQRKVRVLGRLVPGCRKEP PVILEEATDYIAALEMQ
Sbjct: 121 AGNNRSKKPRVSVLRLRGKSLPAVQRKVRVLGRLVPGCRKEPLPVILEEATDYIAALEMQ 180

Query: 181 VRAMTALAELLSASTSVAGSSSAPPS 201
           VRAM+ALAELLSASTS AGSSS+PPS
Sbjct: 181 VRAMSALAELLSASTSAAGSSSSPPS 206

[Close]

BLAST of Csor.00g238260 vs. TAIR 10
Match: AT3G17100.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 169.1 bits (427), Expect = 3.7e-42
Identity = 109/198 (55.05%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 7   SNSDRMRESSRKQKKKKNHGNRDRHQNQNHI--NWKSQAQKEIYSSKLVRALNQVRL--- 66
           SNSDR R   RK+KKK +  + ++  + +     W+S+ Q++IYS+KLV AL ++R+   
Sbjct: 19  SNSDRSR---RKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQ 78

Query: 67  ---SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRAS---- 126
              S S+  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK K+QR S    
Sbjct: 79  PSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTT 138

Query: 127 ---TAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAA 186
              T G+ R KK R +VLRLK K LPAVQRKV+VL RLVPGCRK+  PV+LEE TDYIAA
Sbjct: 139 TTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAA 198

Query: 187 LEMQVRAMTALAELLSAS 190
           +EMQ+R MTA+   +S+S
Sbjct: 199 MEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Csor.00g238260 vs. TAIR 10
Match: AT3G17100.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 169.1 bits (427), Expect = 3.7e-42
Identity = 109/198 (55.05%), Postives = 140/198 (70.71%), Query Frame = 0


Query: 7   SNSDRMRESSRKQKKKKNHGNRDRHQNQNHI--NWKSQAQKEIYSSKLVRALNQVRL--- 66
           SNSDR R   RK+KKK +  + ++  + +     W+S+ Q++IYS+KLV AL ++R+   
Sbjct: 19  SNSDRSR---RKRKKKSSPSSVEKSPSPSISLEKWRSEKQQQIYSTKLVHALRELRISQQ 78

Query: 67  ---SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRAS---- 126
              S S+  PR GRAVRE ADR LAVAA+G+T WSRAIL+  +KLKFRK K+QR S    
Sbjct: 79  PSSSSSSSIPRGGRAVREVADRALAVAARGKTLWSRAILSKAVKLKFRKHKRQRISNPTT 138

Query: 127 ---TAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATDYIAA 186
              T G+ R KK R +VLRLK K LPAVQRKV+VL RLVPGCRK+  PV+LEE TDYIAA
Sbjct: 139 TTLTTGSIRSKKQRATVLRLKAKGLPAVQRKVKVLSRLVPGCRKQSLPVVLEETTDYIAA 198

Query: 187 LEMQVRAMTALAELLSAS 190
           +EMQ+R MTA+   +S+S
Sbjct: 199 MEMQIRTMTAILSAVSSS 213

[Close]

BLAST of Csor.00g238260 vs. TAIR 10
Match: AT3G06590.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.0e-40
Identity = 111/214 (51.87%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 3   SSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       +  +      + H  W+S+ Q+ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTA 122
                S S  A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK ++ RA+ A
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 ----------GNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEAT 182
                      +NR +K RVSVLRL  K++P V RKVRVLGRLVPGC K+  PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 201
           DYI ALEMQVRAM +L +LLS+        SAPP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSS------YGSAPP 219

[Close]

BLAST of Csor.00g238260 vs. TAIR 10
Match: AT3G06590.2 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 163.3 bits (412), Expect = 2.0e-40
Identity = 111/214 (51.87%), Postives = 139/214 (64.95%), Query Frame = 0


Query: 3   SSVLSNSDRMRESSRKQKKKKNHGNRDRHQNQNHINWKSQAQKEIYSSKLVRALNQVRL- 62
           +S  S+  R ++ S       +  +      + H  W+S+ Q+ IYS+KL +AL QVRL 
Sbjct: 12  TSTTSDLVRRKKRSSASSAASSRSSASSVSGEIHARWRSEKQQRIYSAKLFQALQQVRLN 71

Query: 63  -----SPSNEAPRRGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRKPKKQRASTA 122
                S S  A +RG+AVREAADR LAV+A+GRT WSRAIL NR+KLKFRK ++ RA+ A
Sbjct: 72  SSASTSSSPTAQKRGKAVREAADRALAVSARGRTLWSRAILANRIKLKFRKQRRPRATMA 131

Query: 123 ----------GNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEAT 182
                      +NR +K RVSVLRL  K++P V RKVRVLGRLVPGC K+  PVILEEAT
Sbjct: 132 IPAMTTVVSSSSNRSRKRRVSVLRLNKKSIPDVNRKVRVLGRLVPGCGKQSVPVILEEAT 191

Query: 183 DYIAALEMQVRAMTALAELLSASTSVAGSSSAPP 201
           DYI ALEMQVRAM +L +LLS+        SAPP
Sbjct: 192 DYIQALEMQVRAMNSLVQLLSS------YGSAPP 219

[Close]

BLAST of Csor.00g238260 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-29
Identity = 91/202 (45.05%), Postives = 130/202 (64.36%), Query Frame = 0


Query: 1   MASSVLSNSDRMRESSRKQKKKKNHGN----RDRHQNQNHI-NWKSQAQKEIYSSKLVRA 60
           M  S+  + +   ESSR++K + +         R  N+  +  WK+   ++IY+ KLV A
Sbjct: 1   MVESLFPSIENTGESSRRKKPRISETAEAEIEARRVNEESLKRWKTNRVQQIYACKLVEA 60

Query: 61  LNQVR----LSPSNEAPR----RGRAVREAADRILAVAAKGRTRWSRAILTNRLKLKFRK 120
           L +VR     + +NE  +      R +R+ ADR+LA +A+G TRWSRAIL +R++ K +K
Sbjct: 61  LRRVRQRSSTTSNNETDKLVSGAAREIRDTADRVLAASARGTTRWSRAILASRVRAKLKK 120

Query: 121 PKKQRASTAGNNRPKKPRVSVLRLKGKTLPAVQRKVRVLGRLVPGCRKEPWPVILEEATD 180
            +K + ST GN + +K      R+K   LPAV+RK+++LGRLVPGCRK   P +L+EATD
Sbjct: 121 HRKAKKST-GNCKSRKGLTETNRIK---LPAVERKLKILGRLVPGCRKVSVPNLLDEATD 180

Query: 181 YIAALEMQVRAMTALAELLSAS 190
           YIAALEMQVRAM ALAELL+A+
Sbjct: 181 YIAALEMQVRAMEALAELLTAA 198

The following BLAST results are available for this feature:

BLAST of Csor.00g238260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LSN7	5.2e-41	55.05	Transcription factor bHLH147 OS=Arabidopsis thaliana OX=3702 GN=BHLH147 PE=1 SV=...	[more]
Q9C8Z9	2.8e-39	51.87	Transcription factor bHLH148 OS=Arabidopsis thaliana OX=3702 GN=BHLH148 PE=1 SV=...	[more]
O80482	2.9e-28	45.05	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]
Q9M9L6	5.9e-21	42.86	Transcription factor bHLH150 OS=Arabidopsis thaliana OX=3702 GN=BHLH150 PE=1 SV=...	[more]

BLAST of Csor.00g238260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594020.1	2.99e-126	100.00	Transcription factor basic helix-loop-helix 147, partial [Cucurbita argyrosperma...	[more]
KAG7026360.1	6.53e-126	100.00	Transcription factor bHLH, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023514807.1	1.17e-123	99.00	transcription factor bHLH147-like [Cucurbita pepo subsp. pepo] >XP_023514808.1 t...	[more]
XP_022930482.1	6.76e-123	99.00	transcription factor bHLH147-like [Cucurbita moschata]	[more]
XP_022999891.1	2.16e-119	97.00	transcription factor bHLH147-like [Cucurbita maxima]	[more]

BLAST of Csor.00g238260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EQM7	3.27e-123	99.00	transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111436924 ...	[more]
A0A6J1KED1	1.05e-119	97.00	transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111494233 PE...	[more]
A0A6J1H465	6.41e-112	91.54	transcription factor bHLH147-like OS=Cucurbita moschata OX=3662 GN=LOC111460328 ...	[more]
A0A6J1L1P5	2.14e-110	90.55	transcription factor bHLH147-like OS=Cucurbita maxima OX=3661 GN=LOC111499053 PE...	[more]
A0A0A0KCL4	9.12e-106	89.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G327940 PE=4 SV=1	[more]

BLAST of Csor.00g238260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G17100.1	3.7e-42	55.05	sequence-specific DNA binding transcription factors	[more]
AT3G17100.2	3.7e-42	55.05	sequence-specific DNA binding transcription factors	[more]
AT3G06590.1	2.0e-40	51.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06590.2	2.0e-40	51.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G09250.1	2.1e-29	45.05	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR33124:SF78	TRANSCRIPTION FACTOR BHLH148-LIKE ISOFORM X1	coord: 15..200
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 15..200
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 128..183 e-value: 1.42775E-16 score: 68.8032
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 142..189

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g238260.m01	Csor.00g238260.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding