Csor.00g238150 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g238150
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	zinc finger CCHC domain-containing protein 10-like
Location	Csor_Chr08: 8046793 .. 8047572 (+)
RNA-Seq Expression	Csor.00g238150
Synteny	Csor.00g238150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codonsinglepolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCCGCTGCTCTTAGTGCAGCAAAGGGGCTCAGTCGTGCTCAGGCTGAACGAGCAGCTGCGGCTGCTGCTCGAAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGGCTCTATGTCTAGCGCTGGTGGAGGTGCTGCTGCACAGTGCCAGAAATGTTATCAGGTGGGGCATTGGACGTATGAATGCAAAAACGAACGAGTTTACATATCTCGGCCATCTCGAACTCAACAACTTAAGAATCCCAAGTTGAGGATGAAGATGGCAGCCTCTTATGATCTGGACAACCCGGATTCTGATACGAAGGAGGAGAAGAAGAAGAAGACTGAGAAGCATTCGAAGAAGAAAAGCAAAAGAAAGCATGGGCGGTCCAGTAGCGATAGTGAGGCCTCTGCTTTAGAGACTGAAAGTGGGTCATCATCAGTTTCTGGAAGCAGTTCAGATTACAGTTCTTCATCTGAATCAGAATCAGAGAGGAGTCGGAGAAGGAGAAAGAAGCAGAAAAGGGAGAGAAGAAAGAGGAGGTACAGTTCATCTTCTGAATCTTCTGACTCTGACTCCGGTTCTGAATCAGAATCTGATTCCGATGATGAACGTAGTCGGAGGAAGAGCCGAAGGCACAGCAGAAGGCGCTAG

mRNA sequence

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCCGCTGCTCTTAGTGCAGCAAAGGGGCTCAGTCGTGCTCAGGCTGAACGAGCAGCTGCGGCTGCTGCTCGAAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGGCTCTATGTCTAGCGCTGGTGGAGGTGCTGCTGCACAGTGCCAGAAATGTTATCAGGTGGGGCATTGGACGTATGAATGCAAAAACGAACGAGTTTACATATCTCGGCCATCTCGAACTCAACAACTTAAGAATCCCAAGTTGAGGATGAAGATGGCAGCCTCTTATGATCTGGACAACCCGGATTCTGATACGAAGGAGGAGAAGAAGAAGAAGACTGAGAAGCATTCGAAGAAGAAAAGCAAAAGAAAGCATGGGCGGTCCAGTAGCGATAGTGAGGCCTCTGCTTTAGAGACTGAAAGTGGGTCATCATCAGTTTCTGGAAGCAGTTCAGATTACAGTTCTTCATCTGAATCAGAATCAGAGAGGAGTCGGAGAAGGAGAAAGAAGCAGAAAAGGGAGAGAAGAAAGAGGAGGTACAGTTCATCTTCTGAATCTTCTGACTCTGACTCCGGTTCTGAATCAGAATCTGATTCCGATGATGAACGTAGTCGGAGGAAGAGCCGAAGGCACAGCAGAAGGCGCTAG

Coding sequence (CDS)

ATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGAAAGGATTAAGGCCGCTGCTCTTAGTGCAGCAAAGGGGCTCAGTCGTGCTCAGGCTGAACGAGCAGCTGCGGCTGCTGCTCGAAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCAGATTGGGTGAAAGAAAGGACCTTAAGGGCTCTATGTCTAGCGCTGGTGGAGGTGCTGCTGCACAGTGCCAGAAATGTTATCAGGTGGGGCATTGGACGTATGAATGCAAAAACGAACGAGTTTACATATCTCGGCCATCTCGAACTCAACAACTTAAGAATCCCAAGTTGAGGATGAAGATGGCAGCCTCTTATGATCTGGACAACCCGGATTCTGATACGAAGGAGGAGAAGAAGAAGAAGACTGAGAAGCATTCGAAGAAGAAAAGCAAAAGAAAGCATGGGCGGTCCAGTAGCGATAGTGAGGCCTCTGCTTTAGAGACTGAAAGTGGGTCATCATCAGTTTCTGGAAGCAGTTCAGATTACAGTTCTTCATCTGAATCAGAATCAGAGAGGAGTCGGAGAAGGAGAAAGAAGCAGAAAAGGGAGAGAAGAAAGAGGAGGTACAGTTCATCTTCTGAATCTTCTGACTCTGACTCCGGTTCTGAATCAGAATCTGATTCCGATGATGAACGTAGTCGGAGGAAGAGCCGAAGGCACAGCAGAAGGCGCTAG

Protein sequence

MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR

Homology

[Close]

BLAST of Csor.00g238150 vs. ExPASy Swiss-Prot
Match: Q9CX48 (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05
Identity = 64/159 (40.25%), Postives = 81/159 (50.94%), Query Frame = 0


Query: 97  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKK 156
           +CQKC + GHWTYECK +R Y+ RPSRT +LK     +K   +  L     +T  EKK K
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKK---ALKEKENRLLLQSIGETNIEKKIK 81

Query: 157 TEKHSKKKSKRKHGRSSSDSEASALETE-SGSSSVSGSSSDYSSSSESESERSRRRRKKQ 216
            +K SK  +      S S +  S+ E+E S SSS   S SD S SS S S  S       
Sbjct: 82  KKKRSKSVTSSSTSSSDSSASESSSESETSASSSSEDSDSDESLSSSSSSSSSSACSSSS 141

Query: 217 KRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRR 255
                     S S SS S S S SES SDDE  ++K ++
Sbjct: 142 SSSSSSSSSDSDSSSSSSSSSSSSESSSDDEPQKKKKKK 177

[Close]

BLAST of Csor.00g238150 vs. ExPASy Swiss-Prot
Match: Q8TBK6 (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 1.7e-04
Identity = 60/164 (36.59%), Postives = 81/164 (49.39%), Query Frame = 0


Query: 97  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKK 156
           +CQKC + GHWTYEC  +R Y+ RPSRT +LK      +          +++ + + KKK
Sbjct: 44  RCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKEKENRLLLQQSIGETNVERKAKKK 103

Query: 157 TEKHSKKKSKRKHGRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRRRKKQK 216
             K     S      S+SDS + + ET + SSS   S +D SSSS S S  S        
Sbjct: 104 RSKSVTSSSSSSSDSSASDSSSESEETSTSSSS-EDSDTDESSSSSSSSASSTT------ 163

Query: 217 RERRKRRYSSSSESSDSDSGSES------ESDSDDERSRRKSRR 255
                   SSSS  SDSDS S S      +S SDDE  ++K ++
Sbjct: 164 --------SSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKKKKK 192

[Close]

BLAST of Csor.00g238150 vs. ExPASy Swiss-Prot
Match: Q5EB97 (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 5.0e-04
Identity = 61/159 (38.36%), Postives = 80/159 (50.31%), Query Frame = 0


Query: 97  QCQKCYQVGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKK 156
           +CQKC + GHWTYECK +R Y+ RPSRT +LK     +K   +  L     +T  E+K K
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKK---ALKEKENRLLQQSMGETNTERKTK 81

Query: 157 TEKHSKKKSKRKHGRSSSDSEASALETESGSSSVSGS-SSDYSSSSESESERSRRRRKKQ 216
                K++ K     SSSDS AS   +ES +S+ S S  SD   S  S S  S       
Sbjct: 82  ----KKRRPKSVTSTSSSDSSASESSSESETSASSSSEDSDADGSLSSSSSSSAYSSSSS 141

Query: 217 KRERRKRRYSSSSESSDSDSGSESESDSDDERSRRKSRR 255
                    S S  SS S S S SES SDDE  +++ ++
Sbjct: 142 SSSSSSSSSSDSDSSSSSSSSSSSESSSDDEPPKKRKKK 173

[Close]

BLAST of Csor.00g238150 vs. NCBI nr
Match: KAG6594009.1 (Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 426 bits (1094), Expect = 1.01e-148
Identity = 259/259 (100.00%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKHGRSSSDSEASA 180
           PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKHGRSSSDSEASA
Sbjct: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKHGRSSSDSEASA 180

Query: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE 240
           LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE
Sbjct: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE 240

Query: 241 SDSDDERSRRKSRRHSRRR 259
           SDSDDERSRRKSRRHSRRR
Sbjct: 241 SDSDDERSRRKSRRHSRRR 259

[Close]

BLAST of Csor.00g238150 vs. NCBI nr
Match: KAG7026351.1 (Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 424 bits (1089), Expect = 1.24e-146
Identity = 258/259 (99.61%), Postives = 258/259 (99.61%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 87  MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 146

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR
Sbjct: 147 EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 206

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKHGRSSSDSEASA 180
           PSRTQQLKNPKLRMKMAASYDLDNPDSD KEEKKKKTEKHSKKKSKRKHGRSSSDSEASA
Sbjct: 207 PSRTQQLKNPKLRMKMAASYDLDNPDSDAKEEKKKKTEKHSKKKSKRKHGRSSSDSEASA 266

Query: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE 240
           LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE
Sbjct: 267 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE 326

Query: 241 SDSDDERSRRKSRRHSRRR 259
           SDSDDERSRRKSRRHSRRR
Sbjct: 327 SDSDDERSRRKSRRHSRRR 345

[Close]

BLAST of Csor.00g238150 vs. NCBI nr
Match: XP_022930426.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata] >XP_022930427.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata] >XP_022930428.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata] >XP_022930429.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 414 bits (1065), Expect = 2.84e-144
Identity = 256/261 (98.08%), Postives = 257/261 (98.47%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEE--KKKKTEKHSKKKSKRKHGRSSSDSEA 180
           PSRTQQLKNPKLRMKMAASYDLDNPDSD +EE  KKKKTEKHSKKKSKRKHGRSSSDSEA
Sbjct: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSSSDSEA 180

Query: 181 SALETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSE 240
           SALETESGSSSVSGSSSDYSSSSESESERSRRRRKK KRERRKRRYSSSSESSDSDSGSE
Sbjct: 181 SALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSE 240

Query: 241 SESDSDDERSRRKSRRHSRRR 259
           SESDSDDERSRRKSRRHSRRR
Sbjct: 241 SESDSDDERSRRKSRRHSRRR 261

[Close]

BLAST of Csor.00g238150 vs. NCBI nr
Match: XP_023514078.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita pepo subsp. pepo] >XP_023514079.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita pepo subsp. pepo] >XP_023514080.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita pepo subsp. pepo] >XP_023514081.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 414 bits (1063), Expect = 5.14e-144
Identity = 255/259 (98.46%), Postives = 255/259 (98.46%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKDLKGSMS AGGGAAAQCQKCYQVGHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSCAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKHGRSSSDSEASA 180
           PSRTQQLKNPKLRMKMAASYDLDNPDSD K EKKK TEKHSKKKSKRKHGRSSSDSEASA
Sbjct: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDMKNEKKK-TEKHSKKKSKRKHGRSSSDSEASA 180

Query: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE 240
           LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE
Sbjct: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE 240

Query: 241 SDSDDERSRRKSRRHSRRR 259
           SDSDDERSRRKSRRHSRRR
Sbjct: 241 SDSDDERSRRKSRRHSRRR 258

[Close]

BLAST of Csor.00g238150 vs. NCBI nr
Match: XP_023000099.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita maxima] >XP_023000100.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita maxima] >XP_023000101.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita maxima] >XP_023000102.1 zinc finger CCHC domain-containing protein 10-like [Cucurbita maxima])

HSP 1 Score: 394 bits (1011), Expect = 3.32e-136
Identity = 244/259 (94.21%), Postives = 247/259 (95.37%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKHGRSSSDSEASA 180
           PSRTQQLKNPKLRMKMAASYDLDNPDSD K++K+KKTEKHSKKKS RKHGRSSSDSEASA
Sbjct: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDVKKKKEKKTEKHSKKKSTRKHGRSSSDSEASA 180

Query: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE 240
           LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQK ERRKRRYSSSSESSDSDS     
Sbjct: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKMERRKRRYSSSSESSDSDSN---- 240

Query: 241 SDSDDERSRRKSRRHSRRR 259
               DERSRRKSRRHSRRR
Sbjct: 241 ----DERSRRKSRRHSRRR 251

[Close]

BLAST of Csor.00g238150 vs. ExPASy TrEMBL
Match: A0A6J1ERD8 (zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111436876 PE=4 SV=1)

HSP 1 Score: 414 bits (1065), Expect = 1.37e-144
Identity = 256/261 (98.08%), Postives = 257/261 (98.47%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEE--KKKKTEKHSKKKSKRKHGRSSSDSEA 180
           PSRTQQLKNPKLRMKMAASYDLDNPDSD +EE  KKKKTEKHSKKKSKRKHGRSSSDSEA
Sbjct: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDMEEEEEKKKKTEKHSKKKSKRKHGRSSSDSEA 180

Query: 181 SALETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSE 240
           SALETESGSSSVSGSSSDYSSSSESESERSRRRRKK KRERRKRRYSSSSESSDSDSGSE
Sbjct: 181 SALETESGSSSVSGSSSDYSSSSESESERSRRRRKKPKRERRKRRYSSSSESSDSDSGSE 240

Query: 241 SESDSDDERSRRKSRRHSRRR 259
           SESDSDDERSRRKSRRHSRRR
Sbjct: 241 SESDSDDERSRRKSRRHSRRR 261

[Close]

BLAST of Csor.00g238150 vs. ExPASy TrEMBL
Match: A0A6J1KCM5 (zinc finger CCHC domain-containing protein 10-like OS=Cucurbita maxima OX=3661 GN=LOC111494397 PE=4 SV=1)

HSP 1 Score: 394 bits (1011), Expect = 1.61e-136
Identity = 244/259 (94.21%), Postives = 247/259 (95.37%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKHGRSSSDSEASA 180
           PSRTQQLKNPKLRMKMAASYDLDNPDSD K++K+KKTEKHSKKKS RKHGRSSSDSEASA
Sbjct: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDVKKKKEKKTEKHSKKKSTRKHGRSSSDSEASA 180

Query: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSESSDSDSGSESE 240
           LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQK ERRKRRYSSSSESSDSDS     
Sbjct: 181 LETESGSSSVSGSSSDYSSSSESESERSRRRRKKQKMERRKRRYSSSSESSDSDSN---- 240

Query: 241 SDSDDERSRRKSRRHSRRR 259
               DERSRRKSRRHSRRR
Sbjct: 241 ----DERSRRKSRRHSRRR 251

[Close]

BLAST of Csor.00g238150 vs. ExPASy TrEMBL
Match: A0A6J1CAJ2 (zinc finger CCHC domain-containing protein 10 OS=Momordica charantia OX=3673 GN=LOC111009881 PE=4 SV=1)

HSP 1 Score: 358 bits (919), Expect = 2.65e-122
Identity = 237/270 (87.78%), Postives = 246/270 (91.11%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKDLK SMSSAGG AAAQCQKCYQVGHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDLKASMSSAGG-AAAQCQKCYQVGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKH---GRSSSDSE 180
           PSRTQQLKNPKLRMKM+ SY+LDNPDS    ++KKKTEKHSKK SKRKH    +S SDSE
Sbjct: 121 PSRTQQLKNPKLRMKMSESYELDNPDSG---KEKKKTEKHSKK-SKRKHRSNAKSGSDSE 180

Query: 181 ASALETESGSSSVSGS-------SSDYSSSSESESER-SRRRRKKQKRERRKRRYSSSSE 240
           AS  ET+SGSSSV+GS       SSDYSSSSESESER SRRRRKKQK+ RRKRRYSSSSE
Sbjct: 181 ASVFETDSGSSSVTGSDDSSEGSSSDYSSSSESESERRSRRRRKKQKKGRRKRRYSSSSE 240

Query: 241 SSDSDSGSESESDSDDERSRRKSRRHSRRR 259
           SSDSDSGSESESDSDDERS+RKSRRHSRRR
Sbjct: 241 SSDSDSGSESESDSDDERSKRKSRRHSRRR 265

[Close]

BLAST of Csor.00g238150 vs. ExPASy TrEMBL
Match: A0A0A0LJ33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 348 bits (894), Expect = 1.63e-118
Identity = 231/269 (85.87%), Postives = 241/269 (89.59%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKD+KGSMS AGG AAAQCQKCYQ+GHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGG-AAAQCQKCYQMGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKH---GRSSSDSE 180
           PSRTQQLKNPKLRMKM  S +LDNPD    EEKK K  KHSKKKSKRKH    +S+SDSE
Sbjct: 121 PSRTQQLKNPKLRMKMEVSLELDNPDPG--EEKKPK--KHSKKKSKRKHRSNAKSNSDSE 180

Query: 181 ASALETESGSSSVSGS-------SSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSES 240
           AS  ET+SGSSSV+ S       SSDYSSSSESESERSRRRRKKQKR RRKRRYSSSS+S
Sbjct: 181 ASVFETDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDS 240

Query: 241 SDSDSGSESESDSDDERSRRKSRRHSRRR 259
           SDSDS SESESDSD+ERSRRKSRRHSR+R
Sbjct: 241 SDSDSRSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of Csor.00g238150 vs. ExPASy TrEMBL
Match: A0A1S3CDQ2 (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 347 bits (891), Expect = 4.65e-118
Identity = 228/269 (84.76%), Postives = 238/269 (88.48%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAGGGAAAQCQKCYQVGHWTYECKNERVYISR 120
           EAKRQMYLMSTEKAVRLGERKD+KGSMSSAGG AAAQCQKCYQ+GHWTYECKNERVYISR
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGG-AAAQCQKCYQMGHWTYECKNERVYISR 120

Query: 121 PSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEKKKKTEKHSKKKSKRKH---GRSSSDSE 180
           PSRTQQLKNPKLRMKM  S +LDNPD   +E    K +KHSK KSKRKH    +S SDSE
Sbjct: 121 PSRTQQLKNPKLRMKMEVSLELDNPDPGEEE----KPKKHSKNKSKRKHRSNAKSDSDSE 180

Query: 181 ASALETESGSSSVSGS-------SSDYSSSSESESERSRRRRKKQKRERRKRRYSSSSES 240
           AS  ET+SGSSSV+ S       SSDYSSSSESE ERSRRRRKKQKR RRKRRYSSSS+S
Sbjct: 181 ASVFETDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDS 240

Query: 241 SDSDSGSESESDSDDERSRRKSRRHSRRR 259
           SDSDS SESESDSD+ERSRRKSRRHSRRR
Sbjct: 241 SDSDSRSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of Csor.00g238150 vs. TAIR 10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 256.5 bits (654), Expect = 2.2e-68
Identity = 186/277 (67.15%), Postives = 213/277 (76.90%), Query Frame = 0


Query: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60
           MS+ K+EKSQ AA+RIKAA L+AAKGLSR QAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 61  EAKRQMYLMSTEKAVRLGERKDLKGSMSSAG--GGAAAQCQKCYQVGHWTYECKNERVYI 120
           E KRQMYLMSTEKAVRLGERKD   S S+ G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 121 SRPSRTQQLKNPKLRMKMAASYDLDNPDSDTKEEK------KKKTEKHSKKKSKRKH--- 180
           SRPSRTQQLKNPKLR K +   DLD  D D +EE+      K + EK S KKSKRKH   
Sbjct: 121 SRPSRTQQLKNPKLRTKPSVD-DLDGSDDDDEEERPDATNGKAEVEKRS-KKSKRKHRSK 180

Query: 181 GRSSSDSEASALETESGSSSVSGSSSDYSSSSESESERSRRR-------RKKQKRERRKR 240
             S SDSEAS  ET+S  SS   SSS+YSSSS+SE ER RRR       ++KQ++ERR+R
Sbjct: 181 SDSESDSEASVFETDSDGSS-GESSSEYSSSSDSEDERRRRRKAKKSKKKQKQRKERRRR 240

Query: 241 RYSSSSESSDSDSGSESESDSDDERSRRKSRRHSRRR 260
             SSSSESS+S+S S+S+SD D  R ++KS+RHS +R
Sbjct: 241 YSSSSSESSESESASDSDSDEDRSRRKKKSKRHSNKR 274

The following BLAST results are available for this feature:

BLAST of Csor.00g238150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9CX48	2.0e-05	40.25	Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1...	[more]
Q8TBK6	1.7e-04	36.59	Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10...	[more]
Q5EB97	5.0e-04	38.36	Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z...	[more]

BLAST of Csor.00g238150 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6594009.1	1.01e-148	100.00	Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma s...	[more]
KAG7026351.1	1.24e-146	99.61	Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma s...	[more]
XP_022930426.1	2.84e-144	98.08	zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata] >XP_0229...	[more]
XP_023514078.1	5.14e-144	98.46	zinc finger CCHC domain-containing protein 10-like [Cucurbita pepo subsp. pepo] ...	[more]
XP_023000099.1	3.32e-136	94.21	zinc finger CCHC domain-containing protein 10-like [Cucurbita maxima] >XP_023000...	[more]

BLAST of Csor.00g238150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ERD8	1.37e-144	98.08	zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1KCM5	1.61e-136	94.21	zinc finger CCHC domain-containing protein 10-like OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1CAJ2	2.65e-122	87.78	zinc finger CCHC domain-containing protein 10 OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0LJ33	1.63e-118	85.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1	[more]
A0A1S3CDQ2	4.65e-118	84.76	zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of Csor.00g238150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49400.1	2.2e-68	67.15	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 93..130 e-value: 5.9E-20 score: 70.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..259
None	No IPR available	PANTHER	PTHR13491:SF2	ZINC FINGER, CCHC-TYPE-RELATED	coord: 14..183
IPR039715	Zinc finger CCHC domain-containing protein 10	PANTHER	PTHR13491	ZCCHC10 PROTEIN	coord: 14..183
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 82..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g238150.m01	Csor.00g238150.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding