Csor.00g236770 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACGATAGCAATGAAGACCAGAGGCTTCCTCTTCATGGCAACCCTAAAGAGTTCGTCTCCATGGACCAATTAGCAGGTGCTCTTCCGTCCTCTTTACCAAACCTGCTCTAGAGACTTTTGGCTCTTTGATTGAATTGAATGATTTATCTGCAAATTTGGAGTGCTGTACAGGAAATTAAACCCTAAATAATATGAAAACGATGAAGAGTTGAAGAAAATCCGAGAGGACGGGATGCTTCACTAATCCATCGATGTTTTCCATTTCTATTTTTTAGTCGAACTTTTTTGGATACGTTTCGTTCTTCTTGAGATGTTGTAGGATTTACTTGATATATGCACACAGAAACTTGGTGATTATGAAGAAATTCGTTACACTTGGATCGAACTGACCATCTATTCGAAGATTGTTATTCATGTAAATCTTAGTCAAAACAAAAATAAAATTATTTCATAGGTTACAATCTTCATAGTTGGATTATCCAGAGTTAATGAGGCTGTTCCAGGGAGAGCCCATTTGGACCCCGTTTAACCGACCACAAGGGCAGCATCCAGCAAGGAAAGAGTACCTCAACACCTTCACTGAGAAAGCTGGAGCGCCACTCCAGGCTCATTAAAGACTTGTGTGTATTCTTCTGTACTATACTATGGCAATCAATACAAATCTGTGAGGTTTAGCTCAGGCTGTGCATTGTTGAGTATGGCTTAGATTAAATACTATATAAATTTGCCAACTGCTGTTGAAACATGGCTTAATAAATGTCTGAGCCTCATATTATTTATGAATTGAGCTTCTCAAAAGAATTGTAATCTGAACCACTTTGGAAAATTATTGGCCCCATTTGATTTTATGATTAAACGATAGAGATTTCTCTCTTGCAGGAAAGATATGGAATCTCGAATATAAAATTCTTATAAACTACATTTATTTTTATTGTTCTACAGACCCTGTATTTGTGTCGATTAATACTGAAGCGCGTAGTACCTTATCACGAAAGCCTGTTTGATAATGTTTTACAGACTATTTGAGTTTGTGTGTCAGATAAATAGTTCAATCATTTCCTTCAGAATACTGTTCTTGTTATACATGTCAATTATATTCTTCCCTACAGTATTGAGGGGTAGCTATGGTGTTTTTGCTTTAGAGATTATTAACTTTTTTAGTTCTCTTGTTGACCAGAAAGTTGCAGGGCTCTTGGAGATCAGAGACTCGTTTATCGCTGGAAAATGTAGGAAAGTTTGTTGCCACAAAGCAAATCTCTGGTAAGCATCTTCTGAATTTGCAACATTGATGTTAATTACATGCTCTTTCTATCCATTCTCGCCAGGCTTTTGATGAATGATCTACATTTTCGACGTCTTGTGCACTTGTATTGCCAAATATTGCAGCTGTTATGATATTAAAATCCCATATGCCTGCTTTACAAACTTCATTTATACCGTCTAGTTAACACAAAGAGTGCTTCTTCTTAAGTGAGTGCTTCTTCTTAAGTGAGTGCTTCTTCTTAAGTGTTATGAATTTTCTTAAAACTGAGTTTGATTCTGTTTGCAGAATTTTGTTAG ATGAACGATAGCAATGAAGACCAGAGGCTTCCTCTTCATGGCAACCCTAAAGAGTTCGTCTCCATGGACCAATTAGCAGGTGCTCTTCCGGAGAGCCCATTTGGACCCCGTTTAACCGACCACAAGGGCAGCATCCAGCAAGGAAAGAGTACCTCAACACCTTCACTGAGAAAGCTGGAGCGCCACTCCAGGCTCATTAAAGACTTAAAGTTGCAGGGCTCTTGGAGATCAGAGACTCGTTTATCGCTGGAAAATGTAGGAAAGTTTGTTGCCACAAAGCAAATCTCTGAATTTTGTTAG ATGAACGATAGCAATGAAGACCAGAGGCTTCCTCTTCATGGCAACCCTAAAGAGTTCGTCTCCATGGACCAATTAGCAGGTGCTCTTCCGGAGAGCCCATTTGGACCCCGTTTAACCGACCACAAGGGCAGCATCCAGCAAGGAAAGAGTACCTCAACACCTTCACTGAGAAAGCTGGAGCGCCACTCCAGGCTCATTAAAGACTTAAAGTTGCAGGGCTCTTGGAGATCAGAGACTCGTTTATCGCTGGAAAATGTAGGAAAGTTTGTTGCCACAAAGCAAATCTCTGAATTTTGTTAG MNDSNEDQRLPLHGNPKEFVSMDQLAGALPESPFGPRLTDHKGSIQQGKSTSTPSLRKLERHSRLIKDLKLQGSWRSETRLSLENVGKFVATKQISEFC Homology
BLAST of Csor.00g236770 vs. ExPASy Swiss-Prot
Match: F6HDT7 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 OS=Vitis vinifera OX=29760 GN=VIT_05s0020g04080 PE=3 SV=1) HSP 1 Score: 45.1 bits (105), Expect = 5.5e-04 Identity = 20/26 (76.92%), Postives = 24/26 (92.31%), Query Frame = 0
BLAST of Csor.00g236770 vs. ExPASy Swiss-Prot
Match: Q8H185 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 OS=Arabidopsis thaliana OX=3702 GN=ARD4 PE=1 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 9.4e-04 Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 0
BLAST of Csor.00g236770 vs. NCBI nr
Match: KAG6593872.1 (hypothetical protein SDJN03_13348, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 200 bits (508), Expect = 1.34e-64 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Csor.00g236770 vs. NCBI nr
Match: KAG7026216.1 (hypothetical protein SDJN02_12715, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 155 bits (391), Expect = 2.79e-46 Identity = 82/95 (86.32%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Csor.00g236770 vs. NCBI nr
Match: XP_008449312.1 (PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 [Cucumis melo] >KAA0057454.1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 [Cucumis melo var. makuwa] >TYK30153.1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 [Cucumis melo var. makuwa]) HSP 1 Score: 50.4 bits (119), Expect = 7.64e-05 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0
BLAST of Csor.00g236770 vs. NCBI nr
Match: XP_023547962.1 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 49.7 bits (117), Expect = 1.48e-04 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0
BLAST of Csor.00g236770 vs. NCBI nr
Match: XP_021636815.1 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2-like [Hevea brasiliensis]) HSP 1 Score: 47.8 bits (112), Expect = 1.76e-04 Identity = 23/30 (76.67%), Postives = 24/30 (80.00%), Query Frame = 0
BLAST of Csor.00g236770 vs. ExPASy TrEMBL
Match: A0A5A7UQS4 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001370 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.70e-05 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0
BLAST of Csor.00g236770 vs. ExPASy TrEMBL
Match: A0A1S3BLR9 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Cucumis melo OX=3656 GN=LOC103491227 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 3.70e-05 Identity = 23/26 (88.46%), Postives = 24/26 (92.31%), Query Frame = 0
BLAST of Csor.00g236770 vs. ExPASy TrEMBL
Match: A0A392NE59 (12-dihydroxy-3-keto-5-methylthiopentene dioxygenase (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0018484 PE=4 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.31e-04 Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0
BLAST of Csor.00g236770 vs. ExPASy TrEMBL
Match: A0A6J1L5T6 (1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase OS=Cucurbita maxima OX=3661 GN=LOC111499393 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.71e-04 Identity = 22/26 (84.62%), Postives = 24/26 (92.31%), Query Frame = 0
BLAST of Csor.00g236770 vs. ExPASy TrEMBL
Match: A0A7J6WBW9 (Uncharacterized protein OS=Thalictrum thalictroides OX=46969 GN=FRX31_015592 PE=4 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 5.17e-04 Identity = 20/28 (71.43%), Postives = 26/28 (92.86%), Query Frame = 0
BLAST of Csor.00g236770 vs. TAIR 10
Match: AT5G43850.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 44.3 bits (103), Expect = 6.7e-05 Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 0
BLAST of Csor.00g236770 vs. TAIR 10
Match: AT4G14716.1 (acireductone dioxygenase 1 ) HSP 1 Score: 43.1 bits (100), Expect = 1.5e-04 Identity = 19/26 (73.08%), Postives = 23/26 (88.46%), Query Frame = 0
BLAST of Csor.00g236770 vs. TAIR 10
Match: AT4G14710.1 (RmlC-like cupins superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 3.3e-04 Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 0
BLAST of Csor.00g236770 vs. TAIR 10
Match: AT4G14710.2 (RmlC-like cupins superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 3.3e-04 Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 0
BLAST of Csor.00g236770 vs. TAIR 10
Match: AT4G14710.3 (RmlC-like cupins superfamily protein ) HSP 1 Score: 42.0 bits (97), Expect = 3.3e-04 Identity = 18/26 (69.23%), Postives = 23/26 (88.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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