Csor.00g236220 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGTCCACTTCCATTTCTGCAACTGGATTGTCCTGTTCTTCTTCTTTCCTTGGAGGATGGGGTTCTTCCGTGGCCGGAGAGGACTACGCGCTGCTGGCGGTGAAGCCGGCTGCAGTGCAAGTGGGCATGGGGAAGGCGGTGAGGTTCCGGCCGATGATGAAGAACGTCAATGAGGGTAAAGGGGTTTTTGCGCCATTGGTTGTAGTTACTCGGAATCTCATCGGCAAGAAGCGCTTCAATCAGCTTAGAGGCAAAGCAATTGCCTTGCATTCTCAGGTAATGCATCTTTTTCCCCCTTAATCTCTCTCACTTAGATCATTTCAAACTTTAAATCAAGGGGAAAAAAAGGTCCAAAATTTTCAATAACCAAGAACCAAATAATCATCAGATTCGACACATCTAGTTTTTCAAACCGTCCTACTTCGATAGTAATGTAACCAAATAATCATCAAACGGACGCATAGACAATTTAGATTCAGATTCAAAACACATCTAGTTTTCCTGAATTTTGTTGTTTCTCAGGTAATCACAGAGTTTTGCAAGTCAATTGGAGCAGATGGAAAACAAAGACAAGGATTAATCAGGCTAGCAAAGAAGAATGGAGAAAGACTTGGATTCCTTGCCTGA ATGGCGTCCACTTCCATTTCTGCAACTGGATTGTCCTGTTCTTCTTCTTTCCTTGGAGGATGGGGTTCTTCCGTGGCCGGAGAGGACTACGCGCTGCTGGCGGTGAAGCCGGCTGCAGTGCAAGTGGGCATGGGGAAGGCGGTGAGGTTCCGGCCGATGATGAAGAACGTCAATGAGGGTAAAGGGGTTTTTGCGCCATTGGTTGTAGTTACTCGGAATCTCATCGGCAAGAAGCGCTTCAATCAGCTTAGAGGCAAAGCAATTGCCTTGCATTCTCAGGTAATCACAGAGTTTTGCAAGTCAATTGGAGCAGATGGAAAACAAAGACAAGGATTAATCAGGCTAGCAAAGAAGAATGGAGAAAGACTTGGATTCCTTGCCTGA ATGGCGTCCACTTCCATTTCTGCAACTGGATTGTCCTGTTCTTCTTCTTTCCTTGGAGGATGGGGTTCTTCCGTGGCCGGAGAGGACTACGCGCTGCTGGCGGTGAAGCCGGCTGCAGTGCAAGTGGGCATGGGGAAGGCGGTGAGGTTCCGGCCGATGATGAAGAACGTCAATGAGGGTAAAGGGGTTTTTGCGCCATTGGTTGTAGTTACTCGGAATCTCATCGGCAAGAAGCGCTTCAATCAGCTTAGAGGCAAAGCAATTGCCTTGCATTCTCAGGTAATCACAGAGTTTTGCAAGTCAATTGGAGCAGATGGAAAACAAAGACAAGGATTAATCAGGCTAGCAAAGAAGAATGGAGAAAGACTTGGATTCCTTGCCTGA MASTSISATGLSCSSSFLGGWGSSVAGEDYALLAVKPAAVQVGMGKAVRFRPMMKNVNEGKGVFAPLVVVTRNLIGKKRFNQLRGKAIALHSQVITEFCKSIGADGKQRQGLIRLAKKNGERLGFLA Homology
BLAST of Csor.00g236220 vs. ExPASy Swiss-Prot
Match: Q9SL05 (Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PGR5 PE=1 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 5.4e-44 Identity = 98/134 (73.13%), Postives = 108/134 (80.60%), Query Frame = 0
BLAST of Csor.00g236220 vs. NCBI nr
Match: XP_022964453.1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita moschata] >KAG6593817.1 Protein PROTON GRADIENT REGULATION 5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026151.1 Protein PROTON GRADIENT REGULATION 5, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 243 bits (620), Expect = 8.64e-81 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Csor.00g236220 vs. NCBI nr
Match: XP_023514813.1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 241 bits (614), Expect = 7.11e-80 Identity = 125/127 (98.43%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Csor.00g236220 vs. NCBI nr
Match: XP_022959256.1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita moschata] >XP_023006090.1 protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita maxima] >KAG6574897.1 Protein PROTON GRADIENT REGULATION 5, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 233 bits (593), Expect = 1.13e-76 Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Csor.00g236220 vs. NCBI nr
Match: XP_023547978.1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 231 bits (589), Expect = 4.62e-76 Identity = 119/127 (93.70%), Postives = 123/127 (96.85%), Query Frame = 0
BLAST of Csor.00g236220 vs. NCBI nr
Match: XP_023000564.1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like [Cucurbita maxima]) HSP 1 Score: 231 bits (589), Expect = 4.77e-76 Identity = 124/128 (96.88%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of Csor.00g236220 vs. ExPASy TrEMBL
Match: A0A6J1HKV7 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111464474 PE=4 SV=1) HSP 1 Score: 243 bits (620), Expect = 4.18e-81 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Csor.00g236220 vs. ExPASy TrEMBL
Match: A0A6J1KZ80 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111498938 PE=4 SV=1) HSP 1 Score: 233 bits (593), Expect = 5.49e-77 Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Csor.00g236220 vs. ExPASy TrEMBL
Match: A0A6J1H4C6 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111460289 PE=4 SV=1) HSP 1 Score: 233 bits (593), Expect = 5.49e-77 Identity = 120/127 (94.49%), Postives = 124/127 (97.64%), Query Frame = 0
BLAST of Csor.00g236220 vs. ExPASy TrEMBL
Match: A0A6J1KKC1 (protein PROTON GRADIENT REGULATION 5, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111494806 PE=4 SV=1) HSP 1 Score: 231 bits (589), Expect = 2.31e-76 Identity = 124/128 (96.88%), Postives = 124/128 (96.88%), Query Frame = 0
BLAST of Csor.00g236220 vs. ExPASy TrEMBL
Match: B0F831 (Proton gradient regulation 5 OS=Cucumis sativus OX=3659 GN=PGR5 PE=4 SV=1) HSP 1 Score: 218 bits (554), Expect = 4.86e-71 Identity = 113/127 (88.98%), Postives = 116/127 (91.34%), Query Frame = 0
BLAST of Csor.00g236220 vs. TAIR 10
Match: AT2G05620.1 (proton gradient regulation 5 ) HSP 1 Score: 178.3 bits (451), Expect = 3.8e-45 Identity = 98/134 (73.13%), Postives = 108/134 (80.60%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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