Csor.00g235600 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g235600
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	DNA ligase 1-like
Location	Csor_Chr08: 6539678 .. 6544983 (+)
RNA-Seq Expression	Csor.00g235600
Synteny	Csor.00g235600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGCGCTGTTTTCCATTTCCGCCACCAGGATATGAGAAGAAATCTAGGGCAGAGGATGCGGACCTACTAAAAAAGGTTTATAACTTTCCTCGTCTTCTAATACATATAATATACATTATAGTACTCTAATGACATATTTGGTGGAGCATCCTACTATAACTTCATTTGCGAGGTTCATTGGGTATTATTTCACACTCATCATCAAGGTTTAAATGACTGTACTTGTTTGGCATTTAGATGAATCAAATGATCCCTTTATTTTCTTTAAGAATTACTGGTTTTATAAACTGCTAGATTCATTGTCGCTTCTTGATAGCCGAGTATTATTCTGCATGAAGATTCCTTGCGTCCCACGTAAAATGAACAATTATTATGTTGTGAGATTAAAAGCATGGATGTTAGTGAATCTTGAGTTAACTGTGTATGCCATTGGCTTTTTTTTTTTATAGATTTGAGCTCATTAGATGTTTTACGAGTAGGCTCTCTGCTAGTCATTTTCCTTCTTATATTTTGTTTTGTTTGTTTGTATCTGTTCTTCTTTTGGGGTGTTCTTGTGTGACTTGAGAATCTAAAAGATACTTCTGCGACATTCACGTGTTTCTTCGGATGAATGATAGCTGTGGATCGCTATATATGCTTCTCACTTTTCTAGTGTTACAATGATGAAAGTGTTTCCTGATATTGTTGAGCAGTTGACCATGTATTTGAAAATATTATCTTGTTTTTGGTTCTCTGTTGGATGTAGACTTTTGTTGTCTTGATCGATGTTTCTGGTTTTTCTTCTGAATGGTATTTTTGGGAAATGCTCTTCTACTTTGACATATATTTATACATGTTATTTGGCATTTGGCATTTCAAGTACTTCAAGTATTTCAAGTGTGGGGTGTGACCAGATCTTTCAGCTTTGAATCATGGCACTGGATGCCTCATTATATCAGTGATCCAAAAATTTCCCAATAATTTTTCTTAGCGTTTTTTTTTGTTGGGGGGCTGTTTAAATGGGAGAGTTTTTTCTTCCATCTCTTTCAGCAGCATAAGCTTGAGACACAAGATTTCTTCCGTGTCTTCTATGGGAAGTTTCAATTTCTTCAGAAGGAATCTTAATGATAGTAAAACTTAAGATTTGATTCCTCGTCGGTCCAATTTCACCGGGATTCTATTTATTTTTTGATTTGTTGGTCTTTCGAATTCTTTGGGAATTTTCACTTATTAATCTCCCTTCCAGATCTTAAGCTTACATTTTCCATGTGTAGAGGACTTCCCTTTTGTTAACTATATTGTATGGAATAAGGATAAAGTCCCCATATGGTTGTTTGGTTGGTGACTTGATAGAAGACCAATTCCATTTTCGGTATGCACATTCAAATGACAACCATAAGGCCCTCATGTGAAGCTAGCATGAGAAAAGAAATAGTGTATAACCAAACCAAACACTAGTTTCAAATGAGAATCCTAAGGTCCTCAAAGCATTCTATTGGAAGTTACAAATGAAGCTTGAATATAGAATATGATATGGAATATTGAATGTCATGCACAACTCAATTGCAAATCTGACTATTTTAATCGAGCTAGATGGCTTTTTGTGTGAAGAGAGAAGGATGAATCACTGTGGGAAGAATTTAGAGATTGAGAGAGATAGGGGCATGAAATGAGAAGTAAAAAAATTAAAGCATGGGCAGAGCATGAGTGGTGAGTGAGATGAAGTTGAGCCTTGCTTTTGGAGAAGTTATCGAAATGACGAGATGAGGATGATGCCTTCATATTTTTACTAACCCTGAAAAGGCTGACTTTGTTTGGGGTAGAGGAAGGTTTCCGCCAACAGTTTATAATTTTTCTGCCCTCTCTAACGAAACTTAAACCTGCCTGATTCGTAGACCCAAATTTTTAATGTACATCCACACATAAATTATCCTTATTGTTTCCCTTTTTCATTGTATTCGTGCCTGCATATCTTCACGATGTTAGGGCTGTGTTAATGTCGAGGACGTTAATTTTAATGACTGCAAATTTTCAATGCATTCCTTCCTGTCATTGATAACAGCCATATTTGCATAATTAGATTATGTTTTTGCAATGATCTGTTTTCTGTAACAGCATGTTTTCTTCTTGTATTTCTTCTTTAAACACCGATGAACTGATTGGGGAGTATATATTTTACAAACTGATGGATGTACAGATTGAGTATTGTTTTGATTTCTTATCTCTAATGTTTTGTGGAGATGTATAGGCGGACATGGGTTGTCTTTGGAGCTTTGGGTGGTAGGAAGGAACTGGAGACATGGGTTGTACGTAGGCACATCTTTTGTTTTTCTCCTCCCAGTGTTAATCCTCTGGTATTCTAGAATTGAAGTTTTACTTTCTAATTCAGAGTTCATATTCCTTTAGATTACAGTCTTTAGAACTGCAAAAGTTTTACTGGACTTTGTGGATTGGTTTATGAGATCTGCTTCGAACTCTTATTCGTAACAAACTTCTGAGCACACGCCTTTGTGGGTGCCATACTGTATAAACTTGAGATTTAGGGAGACTTCACTTCGAAATTTGAACAGGTGAAGGGGTTGACAGTTTTATTTGATCCTTGTCAAGTGCTAACTCAATGAATTAGACAAGATCCAAGCAAGTTACACTTCCATTTTCTTTTCCCTTAATGGAAATCTTTGTTAGAGATGCAGAAAATCAAAAACCTTTTGGCCCTTAGTTGTCACTTGTCTACCCCTAAAAATTTATGTTCCATGGTGCAACCCTTGTTGCATGCAGGGCAAGAACGCTGTGAAAGAAGAGATAGATATGGCTTTGGGAGCTTTCGTACATAATCGGGTGCCAATTAAGACAGAGGGTTGTAGGGAATTAGACTACCGATAGAGTCGAAATGGAGAACTTAATTTTGTTTGGATCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCACTATAGCGTGGGCTCTATCCAAAGAACCATCTAAAGTATAAAGAACACTTCTCTAGTAAGCTGACATCGAATTCCATCTTATTCACTTGAGATCATATTTGCTAACGGTAATCCCGTGCCAGAATGCTTCCATTTCCTCGACAAATCTCTATCCTCATTTTGATCCTTGTTTCAAGCTTCCAAAGACTCGCCTCCGCTTTGTTCCATGTTTTTTGGAGTCTTCACATGTTTTCATGTTTTTGTTTCGCAATTCTTGCACTATAAGCGTCGATCTAAAACATTCAACTTATCTCTTGAGCTTCATGCATGGTTTTAGGCCTTCATGAGATTCAAAGGGTTTGTTGGAAGCACAACACATTTGATTGATTTTTGTGAAATTGTGAGAGATGATTTGTGTAGCTCAAATGACATCTACGTCTCTCTTGTGCACTGGTTCATAACTACTCTGGTGATGTGGTGTGTTGATGTTCGACGATTTCCTCGTAATCTTTACTTTTTTCTTTCTTGACAATATCTTGTAGCACCTATTCGTTTAATTATAGACGTGCATATTAGTTTCTATTTGTCCTGTTTCGATTCCAGGTTAAAACAATGCGTGCTGTGTTTTCGCTTGTTTCGAAATGATATTACTCTACTAATATTCATTCTTTTCTTTCTGATTTGCAGGAGAAGAGCAAAGAGAAAAAACATAAAAAGGAGAAAAAGGAGAAGGAGAAGAAAGAGGGTAAAGAAAAAAGAGATAAGGATAAAAGTGAGGAGAAACGCCGGGAAAAGAAAGACAAAAAGAAAGATCGTGACAAAAAGAAGGAAAGGGATAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGCACCACATGCCTTGGAGGACAGTAAACCTTCTGGGAAAATCAAGAGTCAAAATGGAGAGGAAGTTGTTAGAATCAAACATAATAGTATCCAAGAGGAGAAGCATTCTGGGAAACTTGATTCTTACGTCGGAAATAAGATTAGTCAGAATACTGTTCTTCCTAAGGAGACGAAGAACTCGAAGTTGGTGCCGGAGGTGGGGAGGAGAATCGAGGACAGTGGAACTGCAAAGGTCGAGAAACTTGCTGTTGCACAACCGAAAAGGGATGATGGAGTGGCCACACAGGTGGCTAGGAGTTCTGAGATCTTGTTTGAAGGTAATAAGGAACATATCAAGAACAAGACAATTGATCAAGGAAAATACAACGGTCAAGGAATTAGGCACGACGAAAGATTCAGTGGAGATTCTACGGTCCCAAGTTTCACTGCAACTACGATTACGACTGCGAATGCAACCGTTGAATCAGCGGAGAAAATTGCGGAGAGAAGGAAAGAAACAAATGATAAAATCAGACCGAAAGAAGGCGAAGAAAAACGAGGGAGCAAGCACAAGGATAAAGATAAAGAGAAAAAAGGACGATCAAACGATAAAGCGACCGATAAAGAGAAGAAGAAAGAAAAGAAGGCGAAGGAGAAGAAGGAGAAGAAGGCGAAGCAGAAAGAGGAGGAAGAGAAGAATGCAGTGGTAGATAAAACAAAAGAGATCACTAAGGATAACCTCATAGGTAGGCATTCTACAAACACAGATACATCACAACTTCCTGACGGCAATATTGGTGCTGCAGTTGAAGAAAATCTAGTTAAGAAACGGAAAGCGTTTGAGCCTAATGGAGTCTTGCACGGTGAGTTTATTCGTATAAACGAACGAACCACGTAATTATTTGGCAATGGATCTGTTTATTTAAAGTTGTTGTAGTTTATACTGTTGGCTTTTTTAGCTCTCAAAATAGTTTTCTTAATGTTCTTTCAGCAATTGACAACAGATCCAGTAAGTTGTTGAGGCCAGCTTCTCATCCATTGAAGGAAAACGGAAGGATACTCGAACCGTGCTTGGCTTCCCCCTTGCCTCCTTCGGAGAGACAGACCGTGGCAGCAAATGACGTTATTTTGGTTAGTAAAGAACGTAAGATAAATGGCATTATTGAAGCTCACCACCGGCCCGCCTCTCTGAAACACAAGACGGGCGGACAGGATGATCATCCTCAACCACAACCTCAACCTCAACCTCAACCTCAACCTCAACTTCAACTTCAACTTCAACCTCAACCTCAACCTCAACCTACTGCAATACATAAAAAATCACCCCATCCAGATTCCAAGTTCTTGAGCGTGGTATATTCAGTTCCGAAAATGGAGGAATTGTCGGAATCTGATAACCAAGATTGGTTATTTACCAGTAATACTTCCCAAGCGATGAAGCCCGAGTTGGAAGCTTCAGAAGCCAAGGAAATGCCGCAGGTATGGGCCGAGGCGATGCAGATAGAACCATCTGATGTTTATGCTCTGCCTTATGTTATTCCCTACTGA

mRNA sequence

ATGTCGCGCTGTTTTCCATTTCCGCCACCAGGATATGAGAAGAAATCTAGGGCAGAGGATGCGGACCTACTAAAAAAGGAGAAGAGCAAAGAGAAAAAACATAAAAAGGAGAAAAAGGAGAAGGAGAAGAAAGAGGGTAAAGAAAAAAGAGATAAGGATAAAAGTGAGGAGAAACGCCGGGAAAAGAAAGACAAAAAGAAAGATCGTGACAAAAAGAAGGAAAGGGATAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGCACCACATGCCTTGGAGGACAGTAAACCTTCTGGGAAAATCAAGAGTCAAAATGGAGAGGAAGTTGTTAGAATCAAACATAATAGTATCCAAGAGGAGAAGCATTCTGGGAAACTTGATTCTTACGTCGGAAATAAGATTAGTCAGAATACTGTTCTTCCTAAGGAGACGAAGAACTCGAAGTTGGTGCCGGAGGTGGGGAGGAGAATCGAGGACAGTGGAACTGCAAAGGTCGAGAAACTTGCTGTTGCACAACCGAAAAGGGATGATGGAGTGGCCACACAGGTGGCTAGGAGTTCTGAGATCTTGTTTGAAGGTAATAAGGAACATATCAAGAACAAGACAATTGATCAAGGAAAATACAACGGTCAAGGAATTAGGCACGACGAAAGATTCAGTGGAGATTCTACGGTCCCAAGTTTCACTGCAACTACGATTACGACTGCGAATGCAACCGTTGAATCAGCGGAGAAAATTGCGGAGAGAAGGAAAGAAACAAATGATAAAATCAGACCGAAAGAAGGCGAAGAAAAACGAGGGAGCAAGCACAAGGATAAAGATAAAGAGAAAAAAGGACGATCAAACGATAAAGCGACCGATAAAGAGAAGAAGAAAGAAAAGAAGGCGAAGGAGAAGAAGGAGAAGAAGGCGAAGCAGAAAGAGGAGGAAGAGAAGAATGCAGTGGTAGATAAAACAAAAGAGATCACTAAGGATAACCTCATAGGTAGGCATTCTACAAACACAGATACATCACAACTTCCTGACGGCAATATTGGTGCTGCAGTTGAAGAAAATCTAGTTAAGAAACGGAAAGCGTTTGAGCCTAATGGAGTCTTGCACGCAATTGACAACAGATCCAGTAAGTTGTTGAGGCCAGCTTCTCATCCATTGAAGGAAAACGGAAGGATACTCGAACCGTGCTTGGCTTCCCCCTTGCCTCCTTCGGAGAGACAGACCGTGGCAGCAAATGACGTTATTTTGGTTAGTAAAGAACGTAAGATAAATGGCATTATTGAAGCTCACCACCGGCCCGCCTCTCTGAAACACAAGACGGGCGGACAGGATGATCATCCTCAACCACAACCTCAACCTCAACCTCAACCTCAACCTCAACTTCAACTTCAACTTCAACCTCAACCTCAACCTCAACCTACTGCAATACATAAAAAATCACCCCATCCAGATTCCAAGTTCTTGAGCGTGGTATATTCAGTTCCGAAAATGGAGGAATTGTCGGAATCTGATAACCAAGATTGGTTATTTACCAGTAATACTTCCCAAGCGATGAAGCCCGAGTTGGAAGCTTCAGAAGCCAAGGAAATGCCGCAGGTATGGGCCGAGGCGATGCAGATAGAACCATCTGATGTTTATGCTCTGCCTTATGTTATTCCCTACTGA

Coding sequence (CDS)

ATGTCGCGCTGTTTTCCATTTCCGCCACCAGGATATGAGAAGAAATCTAGGGCAGAGGATGCGGACCTACTAAAAAAGGAGAAGAGCAAAGAGAAAAAACATAAAAAGGAGAAAAAGGAGAAGGAGAAGAAAGAGGGTAAAGAAAAAAGAGATAAGGATAAAAGTGAGGAGAAACGCCGGGAAAAGAAAGACAAAAAGAAAGATCGTGACAAAAAGAAGGAAAGGGATAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAAGCACCACATGCCTTGGAGGACAGTAAACCTTCTGGGAAAATCAAGAGTCAAAATGGAGAGGAAGTTGTTAGAATCAAACATAATAGTATCCAAGAGGAGAAGCATTCTGGGAAACTTGATTCTTACGTCGGAAATAAGATTAGTCAGAATACTGTTCTTCCTAAGGAGACGAAGAACTCGAAGTTGGTGCCGGAGGTGGGGAGGAGAATCGAGGACAGTGGAACTGCAAAGGTCGAGAAACTTGCTGTTGCACAACCGAAAAGGGATGATGGAGTGGCCACACAGGTGGCTAGGAGTTCTGAGATCTTGTTTGAAGGTAATAAGGAACATATCAAGAACAAGACAATTGATCAAGGAAAATACAACGGTCAAGGAATTAGGCACGACGAAAGATTCAGTGGAGATTCTACGGTCCCAAGTTTCACTGCAACTACGATTACGACTGCGAATGCAACCGTTGAATCAGCGGAGAAAATTGCGGAGAGAAGGAAAGAAACAAATGATAAAATCAGACCGAAAGAAGGCGAAGAAAAACGAGGGAGCAAGCACAAGGATAAAGATAAAGAGAAAAAAGGACGATCAAACGATAAAGCGACCGATAAAGAGAAGAAGAAAGAAAAGAAGGCGAAGGAGAAGAAGGAGAAGAAGGCGAAGCAGAAAGAGGAGGAAGAGAAGAATGCAGTGGTAGATAAAACAAAAGAGATCACTAAGGATAACCTCATAGGTAGGCATTCTACAAACACAGATACATCACAACTTCCTGACGGCAATATTGGTGCTGCAGTTGAAGAAAATCTAGTTAAGAAACGGAAAGCGTTTGAGCCTAATGGAGTCTTGCACGCAATTGACAACAGATCCAGTAAGTTGTTGAGGCCAGCTTCTCATCCATTGAAGGAAAACGGAAGGATACTCGAACCGTGCTTGGCTTCCCCCTTGCCTCCTTCGGAGAGACAGACCGTGGCAGCAAATGACGTTATTTTGGTTAGTAAAGAACGTAAGATAAATGGCATTATTGAAGCTCACCACCGGCCCGCCTCTCTGAAACACAAGACGGGCGGACAGGATGATCATCCTCAACCACAACCTCAACCTCAACCTCAACCTCAACCTCAACTTCAACTTCAACTTCAACCTCAACCTCAACCTCAACCTACTGCAATACATAAAAAATCACCCCATCCAGATTCCAAGTTCTTGAGCGTGGTATATTCAGTTCCGAAAATGGAGGAATTGTCGGAATCTGATAACCAAGATTGGTTATTTACCAGTAATACTTCCCAAGCGATGAAGCCCGAGTTGGAAGCTTCAGAAGCCAAGGAAATGCCGCAGGTATGGGCCGAGGCGATGCAGATAGAACCATCTGATGTTTATGCTCTGCCTTATGTTATTCCCTACTGA

Protein sequence

MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRREKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEEKHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVATQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATVESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKKEKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERKINGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKSPHPDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEPSDVYALPYVIPY

Homology

[Close]

BLAST of Csor.00g235600 vs. NCBI nr
Match: KAG6593755.1 (hypothetical protein SDJN03_13231, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 980 bits (2534), Expect = 0.0
Identity = 552/552 (100.00%), Postives = 552/552 (100.00%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE
Sbjct: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA
Sbjct: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240
           TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV
Sbjct: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240

Query: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300
           ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK
Sbjct: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300

Query: 301 EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF 360
           EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF
Sbjct: 301 EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF 360

Query: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK 420
           EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK
Sbjct: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK 420

Query: 421 INGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKSPH 480
           INGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKSPH
Sbjct: 421 INGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKSPH 480

Query: 481 PDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP 540
           PDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP
Sbjct: 481 PDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP 540

Query: 541 SDVYALPYVIPY 552
           SDVYALPYVIPY
Sbjct: 541 SDVYALPYVIPY 552

[Close]

BLAST of Csor.00g235600 vs. NCBI nr
Match: XP_023513944.1 (DNA ligase 1-like [Cucurbita pepo subsp. pepo] >XP_023513947.1 DNA ligase 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 935 bits (2416), Expect = 0.0
Identity = 535/554 (96.57%), Postives = 540/554 (97.47%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEK--KEGKEKRDKDKSEEK 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEK  KEGKEKRDKDKSEEK
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKEKKEGKEKRDKDKSEEK 60

Query: 61  RREKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQ 120
           RREKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDS+PSGKIKSQNGEEVVRIKHNSIQ
Sbjct: 61  RREKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSRPSGKIKSQNGEEVVRIKHNSIQ 120

Query: 121 EEKHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDG 180
           EEKHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDG
Sbjct: 121 EEKHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDG 180

Query: 181 VATQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANA 240
           VATQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATT TTANA
Sbjct: 181 VATQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTTTTANA 240

Query: 241 TVESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKE 300
           T+ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKE
Sbjct: 241 TIESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKE 300

Query: 301 KKEKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRK 360
           KK   AKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPD NIGAAVEENL+KKRK
Sbjct: 301 KK---AKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDSNIGAAVEENLIKKRK 360

Query: 361 AFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKE 420
           AFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPC+ASPLPPSERQTVAANDVILVSKE
Sbjct: 361 AFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCMASPLPPSERQTVAANDVILVSKE 420

Query: 421 RKINGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKS 480
           RKINGIIEAHH PASLKHKTGGQDD    QPQPQPQPQ QLQLQLQPQ QPQPTAIHKKS
Sbjct: 421 RKINGIIEAHHPPASLKHKTGGQDD----QPQPQPQPQLQLQLQLQPQLQPQPTAIHKKS 480

Query: 481 PHPDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQI 540
           PHPDSKFLSVVYSVPKMEELS+SDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQI
Sbjct: 481 PHPDSKFLSVVYSVPKMEELSDSDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQI 540

Query: 541 EPSDVYALPYVIPY 552
           EPSDVYALPYVIPY
Sbjct: 541 EPSDVYALPYVIPY 547

[Close]

BLAST of Csor.00g235600 vs. NCBI nr
Match: XP_022964370.1 (DNA ligase 1-like [Cucurbita moschata])

HSP 1 Score: 926 bits (2393), Expect = 0.0
Identity = 532/552 (96.38%), Postives = 534/552 (96.74%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDKKKDRDKKKERD      KEKEKAPHALEDS+PSGKIKSQNGEEVVRIKHNSIQEE
Sbjct: 61  EKKDKKKDRDKKKERD------KEKEKAPHALEDSRPSGKIKSQNGEEVVRIKHNSIQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA
Sbjct: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240
           TQVARSSEIL EGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV
Sbjct: 181 TQVARSSEILLEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240

Query: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300
           ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKK+KEKK
Sbjct: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKSKEKK 300

Query: 301 EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF 360
           EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF
Sbjct: 301 EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF 360

Query: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK 420
           EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK
Sbjct: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK 420

Query: 421 INGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKSPH 480
           INGIIEAHH PASLKHKTGGQDDHPQ Q Q QPQ Q QLQ QLQ Q QPQPTAIHKKSPH
Sbjct: 421 INGIIEAHHPPASLKHKTGGQDDHPQLQLQLQPQLQLQLQPQLQLQLQPQPTAIHKKSPH 480

Query: 481 PDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP 540
           PDSKFLSVVYSVPKMEEL ESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP
Sbjct: 481 PDSKFLSVVYSVPKMEELLESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP 540

Query: 541 SDVYALPYVIPY 552
            DVYALPYVIPY
Sbjct: 541 PDVYALPYVIPY 546

[Close]

BLAST of Csor.00g235600 vs. NCBI nr
Match: XP_022999905.1 (DNA ligase 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 895 bits (2312), Expect = 0.0
Identity = 519/560 (92.68%), Postives = 525/560 (93.75%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDK KDRDKKKERD    KEKEKEKAPHALEDS+ SGKIKSQNGEEVVRIKHNSIQEE
Sbjct: 61  EKKDKNKDRDKKKERD----KEKEKEKAPHALEDSRSSGKIKSQNGEEVVRIKHNSIQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA
Sbjct: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240
           TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATT TTANATV
Sbjct: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTTTTANATV 240

Query: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300
           ESAEKIAE+RKETNDKIRPKEGE KRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK
Sbjct: 241 ESAEKIAEKRKETNDKIRPKEGEAKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300

Query: 301 EKKAK--------QKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEEN 360
           EKKAK        QKEEEEKNAVVDKTKEITKDNLIGRHST+T+TSQLPD NIGAAVEEN
Sbjct: 301 EKKAKEKKEKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTDTNTSQLPDSNIGAAVEEN 360

Query: 361 LVKKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDV 420
           L+KKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTV ANDV
Sbjct: 361 LIKKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVEANDV 420

Query: 421 ILVSKERKINGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPT 480
           IL SKERKINGIIEAHH PASLKHKT  QDDHPQ QPQPQPQ      LQL    QPQPT
Sbjct: 421 ILFSKERKINGIIEAHHPPASLKHKTSEQDDHPQSQPQPQPQ------LQL----QPQPT 480

Query: 481 AIHKKSPHPDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVW 540
           AIHKKSPHPDSKFLSVVYSVPKMEELS+SDNQDWLFTSN SQAMKPELEASEAKEM QVW
Sbjct: 481 AIHKKSPHPDSKFLSVVYSVPKMEELSDSDNQDWLFTSNNSQAMKPELEASEAKEMLQVW 540

Query: 541 AEAMQIEPSDVYALPYVIPY 552
           AEAMQIEPSDVYALPYVIPY
Sbjct: 541 AEAMQIEPSDVYALPYVIPY 546

[Close]

BLAST of Csor.00g235600 vs. NCBI nr
Match: XP_022999906.1 (myb-like protein X isoform X2 [Cucurbita maxima])

HSP 1 Score: 894 bits (2310), Expect = 0.0
Identity = 516/552 (93.48%), Postives = 522/552 (94.57%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDK KDRDKKKERD    KEKEKEKAPHALEDS+ SGKIKSQNGEEVVRIKHNSIQEE
Sbjct: 61  EKKDKNKDRDKKKERD----KEKEKEKAPHALEDSRSSGKIKSQNGEEVVRIKHNSIQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA
Sbjct: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240
           TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATT TTANATV
Sbjct: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTTTTANATV 240

Query: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300
           ESAEKIAE+RKETNDKIRPKEGE KRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK
Sbjct: 241 ESAEKIAEKRKETNDKIRPKEGEAKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300

Query: 301 EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF 360
              AKQKEEEEKNAVVDKTKEITKDNLIGRHST+T+TSQLPD NIGAAVEENL+KKRKAF
Sbjct: 301 ---AKQKEEEEKNAVVDKTKEITKDNLIGRHSTDTNTSQLPDSNIGAAVEENLIKKRKAF 360

Query: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK 420
           EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTV ANDVIL SKERK
Sbjct: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVEANDVILFSKERK 420

Query: 421 INGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKSPH 480
           INGIIEAHH PASLKHKT  QDDHPQ QPQPQPQ      LQL    QPQPTAIHKKSPH
Sbjct: 421 INGIIEAHHPPASLKHKTSEQDDHPQSQPQPQPQ------LQL----QPQPTAIHKKSPH 480

Query: 481 PDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP 540
           PDSKFLSVVYSVPKMEELS+SDNQDWLFTSN SQAMKPELEASEAKEM QVWAEAMQIEP
Sbjct: 481 PDSKFLSVVYSVPKMEELSDSDNQDWLFTSNNSQAMKPELEASEAKEMLQVWAEAMQIEP 535

Query: 541 SDVYALPYVIPY 552
           SDVYALPYVIPY
Sbjct: 541 SDVYALPYVIPY 535

[Close]

BLAST of Csor.00g235600 vs. ExPASy TrEMBL
Match: A0A6J1HKL8 (DNA ligase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464404 PE=4 SV=1)

HSP 1 Score: 926 bits (2393), Expect = 0.0
Identity = 532/552 (96.38%), Postives = 534/552 (96.74%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDKKKDRDKKKERD      KEKEKAPHALEDS+PSGKIKSQNGEEVVRIKHNSIQEE
Sbjct: 61  EKKDKKKDRDKKKERD------KEKEKAPHALEDSRPSGKIKSQNGEEVVRIKHNSIQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA
Sbjct: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240
           TQVARSSEIL EGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV
Sbjct: 181 TQVARSSEILLEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240

Query: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300
           ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKK+KEKK
Sbjct: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKSKEKK 300

Query: 301 EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF 360
           EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF
Sbjct: 301 EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF 360

Query: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK 420
           EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK
Sbjct: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK 420

Query: 421 INGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKSPH 480
           INGIIEAHH PASLKHKTGGQDDHPQ Q Q QPQ Q QLQ QLQ Q QPQPTAIHKKSPH
Sbjct: 421 INGIIEAHHPPASLKHKTGGQDDHPQLQLQLQPQLQLQLQPQLQLQLQPQPTAIHKKSPH 480

Query: 481 PDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP 540
           PDSKFLSVVYSVPKMEEL ESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP
Sbjct: 481 PDSKFLSVVYSVPKMEELLESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP 540

Query: 541 SDVYALPYVIPY 552
            DVYALPYVIPY
Sbjct: 541 PDVYALPYVIPY 546

[Close]

BLAST of Csor.00g235600 vs. ExPASy TrEMBL
Match: A0A6J1KGW4 (DNA ligase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494242 PE=4 SV=1)

HSP 1 Score: 895 bits (2312), Expect = 0.0
Identity = 519/560 (92.68%), Postives = 525/560 (93.75%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDK KDRDKKKERD    KEKEKEKAPHALEDS+ SGKIKSQNGEEVVRIKHNSIQEE
Sbjct: 61  EKKDKNKDRDKKKERD----KEKEKEKAPHALEDSRSSGKIKSQNGEEVVRIKHNSIQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA
Sbjct: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240
           TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATT TTANATV
Sbjct: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTTTTANATV 240

Query: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300
           ESAEKIAE+RKETNDKIRPKEGE KRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK
Sbjct: 241 ESAEKIAEKRKETNDKIRPKEGEAKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300

Query: 301 EKKAK--------QKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEEN 360
           EKKAK        QKEEEEKNAVVDKTKEITKDNLIGRHST+T+TSQLPD NIGAAVEEN
Sbjct: 301 EKKAKEKKEKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTDTNTSQLPDSNIGAAVEEN 360

Query: 361 LVKKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDV 420
           L+KKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTV ANDV
Sbjct: 361 LIKKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVEANDV 420

Query: 421 ILVSKERKINGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPT 480
           IL SKERKINGIIEAHH PASLKHKT  QDDHPQ QPQPQPQ      LQL    QPQPT
Sbjct: 421 ILFSKERKINGIIEAHHPPASLKHKTSEQDDHPQSQPQPQPQ------LQL----QPQPT 480

Query: 481 AIHKKSPHPDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVW 540
           AIHKKSPHPDSKFLSVVYSVPKMEELS+SDNQDWLFTSN SQAMKPELEASEAKEM QVW
Sbjct: 481 AIHKKSPHPDSKFLSVVYSVPKMEELSDSDNQDWLFTSNNSQAMKPELEASEAKEMLQVW 540

Query: 541 AEAMQIEPSDVYALPYVIPY 552
           AEAMQIEPSDVYALPYVIPY
Sbjct: 541 AEAMQIEPSDVYALPYVIPY 546

[Close]

BLAST of Csor.00g235600 vs. ExPASy TrEMBL
Match: A0A6J1KEE4 (myb-like protein X isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494242 PE=4 SV=1)

HSP 1 Score: 894 bits (2310), Expect = 0.0
Identity = 516/552 (93.48%), Postives = 522/552 (94.57%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDK KDRDKKKERD    KEKEKEKAPHALEDS+ SGKIKSQNGEEVVRIKHNSIQEE
Sbjct: 61  EKKDKNKDRDKKKERD----KEKEKEKAPHALEDSRSSGKIKSQNGEEVVRIKHNSIQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA
Sbjct: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240
           TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATT TTANATV
Sbjct: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTTTTANATV 240

Query: 241 ESAEKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300
           ESAEKIAE+RKETNDKIRPKEGE KRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK
Sbjct: 241 ESAEKIAEKRKETNDKIRPKEGEAKRGSKHKDKDKEKKGRSNDKATDKEKKKEKKAKEKK 300

Query: 301 EKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGAAVEENLVKKRKAF 360
              AKQKEEEEKNAVVDKTKEITKDNLIGRHST+T+TSQLPD NIGAAVEENL+KKRKAF
Sbjct: 301 ---AKQKEEEEKNAVVDKTKEITKDNLIGRHSTDTNTSQLPDSNIGAAVEENLIKKRKAF 360

Query: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVAANDVILVSKERK 420
           EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTV ANDVIL SKERK
Sbjct: 361 EPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTVEANDVILFSKERK 420

Query: 421 INGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQPQPQPTAIHKKSPH 480
           INGIIEAHH PASLKHKT  QDDHPQ QPQPQPQ      LQL    QPQPTAIHKKSPH
Sbjct: 421 INGIIEAHHPPASLKHKTSEQDDHPQSQPQPQPQ------LQL----QPQPTAIHKKSPH 480

Query: 481 PDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAKEMPQVWAEAMQIEP 540
           PDSKFLSVVYSVPKMEELS+SDNQDWLFTSN SQAMKPELEASEAKEM QVWAEAMQIEP
Sbjct: 481 PDSKFLSVVYSVPKMEELSDSDNQDWLFTSNNSQAMKPELEASEAKEMLQVWAEAMQIEP 535

Query: 541 SDVYALPYVIPY 552
           SDVYALPYVIPY
Sbjct: 541 SDVYALPYVIPY 535

[Close]

BLAST of Csor.00g235600 vs. ExPASy TrEMBL
Match: A0A0A0LHZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G147910 PE=4 SV=1)

HSP 1 Score: 675 bits (1742), Expect = 1.66e-238
Identity = 415/570 (72.81%), Postives = 452/570 (79.30%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEK+EGKEKRDKDKS+EKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKREGKEKRDKDKSDEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDKKKDRDKKK+R+KEKEK        HA E+SK SGKI SQNGEEVVR+KHNS+QEE
Sbjct: 61  EKKDKKKDRDKKKDRNKEKEK-------AHASEESKHSGKIGSQNGEEVVRVKHNSVQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           KH+G+ DSYVGNKISQN    KETK++K+V EVGRRIEDSGTAKVEK AVAQP+RDDG+ 
Sbjct: 121 KHAGQFDSYVGNKISQNAFHSKETKHTKMVLEVGRRIEDSGTAKVEKFAVAQPRRDDGMV 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSF----------TA 240
           TQV R SE L E  K+  KNK ID+ KYNGQG+RH+ERFSG S VPS           TA
Sbjct: 181 TQVGRISETLLE-TKDQSKNKKIDERKYNGQGLRHEERFSGSSAVPSSAPTSTATATATA 240

Query: 241 TTITTANATVESA--------EKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSN 300
           T   TA ATVE          EK AERRKE+NDK R KEGEE+R SKHKDKDKEKKGRSN
Sbjct: 241 TATATATATVEPGVPGMFKQLEKSAERRKESNDKTRQKEGEERR-SKHKDKDKEKKGRSN 300

Query: 301 DKATDKEKKKEKKAKEKKEKKAKQKEEEEKNAVVDKTKEITKDNLIGRHSTNTDTSQLPD 360
           DK  +KEKKKEKKAKEK          EEKNA+VDKTKEI KDNL+GRHSTNT+TSQLPD
Sbjct: 301 DKQGNKEKKKEKKAKEK---------VEEKNAMVDKTKEINKDNLLGRHSTNTNTSQLPD 360

Query: 361 GNIGAAVEENLVKKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPS 420
            NI AAVEENL+KKRK FEPNGVLHAIDNRSSKLLRP SH LKENGRILEPCL S LPPS
Sbjct: 361 SNIVAAVEENLIKKRKDFEPNGVLHAIDNRSSKLLRPTSHSLKENGRILEPCLRSTLPPS 420

Query: 421 ERQTVAANDVILVSKERKINGIIEAHHRPASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQ 480
           ERQ V+ ND+ILVSKERKINGIIEAHH PAS KH++G Q DHPQP               
Sbjct: 421 ERQAVS-NDLILVSKERKINGIIEAHHPPASSKHRSG-QVDHPQP--------------- 480

Query: 481 LQPQPQPQPTAIHKKSPHPDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEA 540
                     A+HKKSPHPDSK LS VYSVPKMEELS+SD+QDWLF+ N+S AMKP+LE 
Sbjct: 481 ---------PAMHKKSPHPDSKHLSQVYSVPKMEELSDSDSQDWLFSGNSSLAMKPKLEV 526

Query: 541 SEAKEMPQVWAEAMQIEPSDVYALPYVIPY 552
           SEAKEMP VWA+AMQIE +DVYALPYVIPY
Sbjct: 541 SEAKEMPNVWADAMQIESADVYALPYVIPY 526

[Close]

BLAST of Csor.00g235600 vs. ExPASy TrEMBL
Match: A0A6J1CD63 (DNA ligase 1 OS=Momordica charantia OX=3673 GN=LOC111009661 PE=4 SV=1)

HSP 1 Score: 671 bits (1731), Expect = 8.37e-237
Identity = 411/566 (72.61%), Postives = 462/566 (81.63%), Query Frame = 0


Query: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKKEGKEKRDKDKSEEKRR 60
           MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEK+EGKEKRDKD+S+EKRR
Sbjct: 1   MSRCFPFPPPGYEKKSRAEDADLLKKEKSKEKKHKKEKKEKEKREGKEKRDKDRSDEKRR 60

Query: 61  EKKDKKKDRDKKKERDKEKEKEKEKEKAPHALEDSKPSGKIKSQNGEEVVRIKHNSIQEE 120
           EKKDKKKDRDKKK+RDK K+KEKEKEKA HA E+S+P G+  SQNGEEVVR+KHN++QEE
Sbjct: 61  EKKDKKKDRDKKKDRDK-KDKEKEKEKA-HASEESRPLGETGSQNGEEVVRVKHNNVQEE 120

Query: 121 KHSGKLDSYVGNKISQNTVLPKETKNSKLVPEVGRRIEDSGTAKVEKLAVAQPKRDDGVA 180
           K+ G+ DSYVGNKISQN  L KETKN+ L PEVGRRIED GT K+EK AVA+PKRDDG+A
Sbjct: 121 KNGGQFDSYVGNKISQNAFLSKETKNTTLFPEVGRRIEDIGTTKLEKFAVARPKRDDGMA 180

Query: 181 TQVARSSEILFEGNKEHIKNKTIDQGKYNGQGIRHDERFSGDSTVPSFTATTITTANATV 240
           T VARSSE   EG KE  KN+ ID+  YNGQGIRH+ERFSG+S VPS TAT      ATV
Sbjct: 181 TVVARSSETFTEG-KEQNKNRKIDERTYNGQGIRHEERFSGNSAVPSSTAT------ATV 240

Query: 241 ESA--------EKIAERRKETNDKIRPKEGEEKRGSKHKDKDKEKKGRSNDKATDKEKKK 300
           ES         +K+AERRKETNDKIRPKE E K+GSKHKDKDK+KKGRSN K    EKKK
Sbjct: 241 ESGVAGMFKSLDKVAERRKETNDKIRPKESEGKQGSKHKDKDKDKKGRSNHK----EKKK 300

Query: 301 EKKAKEKKEKKAKQKEEE-----EKNAVVDKTKEITKDNLIGRHSTNTDTSQLPDGNIGA 360
           EKKAKEK+++K KQKE+E     EKNA+VDKTKEI KDNL+GR+STNT+TSQLPD NIGA
Sbjct: 301 EKKAKEKEKEKEKQKEKEKEKVEEKNAMVDKTKEINKDNLLGRYSTNTNTSQLPDSNIGA 360

Query: 361 AVEENLVKKRKAFEPNGVLHAIDNRSSKLLRPASHPLKENGRILEPCLASPLPPSERQTV 420
           AVEE L+KKRK FEPNG+LHAIDNRSSKLLRP +HPLKENGRIL+PC+ S LPPSE Q V
Sbjct: 361 AVEEKLIKKRKDFEPNGILHAIDNRSSKLLRPTAHPLKENGRILKPCVTSILPPSESQAV 420

Query: 421 AANDVILVSKERKINGIIEAHHR-PASLKHKTGGQDDHPQPQPQPQPQPQPQLQLQLQPQ 480
           A ND+I  SKERKINGIIEAHH  PAS KH + GQDD                       
Sbjct: 421 A-NDLIPGSKERKINGIIEAHHHLPASSKHVSSGQDD----------------------- 480

Query: 481 PQPQPTAIHKKSPHPDSKFLSVVYSVPKMEELSESDNQDWLFTSNTSQAMKPELEASEAK 540
            QPQPT +HKKSPHPDSK+LS VYSVPKMEELS+SD+Q+WLF+SNTSQAMKP+LE +E +
Sbjct: 481 -QPQPTVVHKKSPHPDSKYLSQVYSVPKMEELSDSDSQEWLFSSNTSQAMKPKLEDTEGE 528

Query: 541 EMPQVWAEAMQIEPSDVYALPYVIPY 552
           E  QVWA+AMQIE +DVYALPYVIPY
Sbjct: 541 ETRQVWADAMQIESADVYALPYVIPY 528

The following BLAST results are available for this feature:

BLAST of Csor.00g235600 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g235600 vs. NCBI nr


Match Name	Identity	Description
KAG6593755.1	100.00	hypothetical protein SDJN03_13231, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023513944.1	96.57	DNA ligase 1-like [Cucurbita pepo subsp. pepo] >XP_023513947.1 DNA ligase 1-like...	[more]
XP_022964370.1	96.38	DNA ligase 1-like [Cucurbita moschata]	[more]
XP_022999905.1	92.68	DNA ligase 1-like isoform X1 [Cucurbita maxima]	[more]
XP_022999906.1	93.48	myb-like protein X isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g235600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HKL8	0.0	96.38	DNA ligase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111464404 PE=4 SV=1	[more]
A0A6J1KGW4	0.0	92.68	DNA ligase 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111494242 PE=4 SV...	[more]
A0A6J1KEE4	0.0	93.48	myb-like protein X isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111494242 PE=4 S...	[more]
A0A0A0LHZ6	1.66e-238	72.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G147910 PE=4 SV=1	[more]
A0A6J1CD63	8.37e-237	72.61	DNA ligase 1 OS=Momordica charantia OX=3673 GN=LOC111009661 PE=4 SV=1	[more]

BLAST of Csor.00g235600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 282..317
None	No IPR available	COILS	Coil	Coil	coord: 21..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..127
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..28
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 202..344
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 222..241
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 446..464
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 243..294
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..442
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 302..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..342
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 428..482
None	No IPR available	PANTHER	PTHR34660	MYB-LIKE PROTEIN X	coord: 1..552
None	No IPR available	PANTHER	PTHR34660:SF17	MYB-LIKE PROTEIN X	coord: 1..552

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g235600.m01	Csor.00g235600.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016874	ligase activity