Csor.00g235470 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g235470
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr08: 6457909 .. 6459228 (-)
RNA-Seq ExpressionCsor.00g235470
SyntenyCsor.00g235470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGGATTTCTGTGAGAGAAAAGGGTATTTTATATGCTTCTCTTATCGATTTGCGTGAGTGAGATAGAGAAATTGGGAGTTTGGGTTTCTGGGTTGGGTTTATTTTGGGGTTTGTGAAGCGGCCTCGTTTGCTGTGAAGTCTCCTCTTGTTGGTTCACATGGGGATTGGGTTTGGGGGATTGGGGCCATTATTGGATCTGTGTTTGATTATTTGGTGGAAATGGTGCTGTTCTTCTTGTTCTTCACGGATTCTGGCTGCTCTGCTTTCTGTGGAGCACTGAAGAACTTGTTGTTCTTGGCTACTGATCACAAGGTTAGTGGAATTTAAGTCATTTTGTGTTTTCTTTTTGGATGAATCTTGTTTAGTCATGAATGATGATTGTGAACTTGGCTCTGTTCAGTTGTTTTTGCTTCAATGAGTTGTTTCTGTGGTTAAAAATGGATGGATTCACTTGTATGTTTGCTTTGATTCTGTTCTTCCCAGCTGAAATTGGATGGATTCATCAAATTTTCTAGAGTTGTTTTATGTTTATGTTCTTAGGTTTGATTACTTTAAAGTTTTCTAGTACAAGTGTTCGTACATCGGTTGGGGAGAAGAACAAATCACAAAACCCAAAGAAGACAATATCGGCTAGTGGTGAGCTTGTGCTGTTACAAATGGTGGGCAACGTGGTATTCTTTAAAGTTATATCGGTTAGCGGTGGGCTTGGGCTGTTACAAATGGGGGTAATATGTTTTTCTTGAATGTTGCCCCCAATGAAAGGTGTTTTAAGGTTTGGATGCAAAAGCAAGTTAAGTCCACGCTTTATAGGACCTACAACCTAAGCCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTGGGCTTTCCGATTCCTTTTCGGGCTTCCCCTCAAAGCTTTTAAAACACGTCTGCTCGGGAGAGATTTCCACACCCAACTAATGTGGGATCTCACAATCTTCTTGCTAAACAAGCGGTTTAATTCTTCAAATATGATTATTTAGAGGGTTAAGAATCTTACTTTCCTAGTTTTAAAGCGTTCGAGAATTGGTTCATCATTGTTTCTAAACTAGTTTCATTTTTCCATCAAATGGTTTATTCGATGTCTCGTGTTCGAGTCTTCTAACAGATTTAATCAATATTGAAGTTACCTTTGCTATGCTTAGTTGATCAGTAGATAGAAGTTTTCCCTTTTGATCTCTGTTCTGAGTTGAAATTTAATGGTAGTTCTTGTGTTCTTTGAAACAAGGACTTATCAAGCAATACATAAGCTGTTTTTGTATGTGATGATCTTTTTCGTGTTCGTTCAGGATACTTGA

mRNA sequence

ATGCGGATTTCTGTGAGAGAAAAGGCGGCCTCGTTTGCTGTGAAGTCTCCTCTTGTTGGTTCACATGGGGATTGGGTTTGGGGGATTGGGGCCATTATTGGATCTGTGTTTGATTATTTGGTGGAAATGGTGCTGTTCTTCTTGTTCTTCACGGATTCTGGCTGCTCTGCTTTCTGTGGAGCACTGAAGAACTTGTTGTTCTTGGCTACTGATCACAAGGATACTTGA

Coding sequence (CDS)

ATGCGGATTTCTGTGAGAGAAAAGGCGGCCTCGTTTGCTGTGAAGTCTCCTCTTGTTGGTTCACATGGGGATTGGGTTTGGGGGATTGGGGCCATTATTGGATCTGTGTTTGATTATTTGGTGGAAATGGTGCTGTTCTTCTTGTTCTTCACGGATTCTGGCTGCTCTGCTTTCTGTGGAGCACTGAAGAACTTGTTGTTCTTGGCTACTGATCACAAGGATACTTGA

Protein sequence

MRISVREKAASFAVKSPLVGSHGDWVWGIGAIIGSVFDYLVEMVLFFLFFTDSGCSAFCGALKNLLFLATDHKDT
Homology
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BLAST of Csor.00g235470 vs. NCBI nr
Match: KAG6593742.1 (hypothetical protein SDJN03_13218, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 156 bits (394), Expect = 5.91e-48
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MRISVREKAASFAVKSPLVGSHGDWVWGIGAIIGSVFDYLVEMVLFFLFFTDSGCSAFCG 60
          MRISVREKAASFAVKSPLVGSHGDWVWGIGAIIGSVFDYLVEMVLFFLFFTDSGCSAFCG
Sbjct: 1  MRISVREKAASFAVKSPLVGSHGDWVWGIGAIIGSVFDYLVEMVLFFLFFTDSGCSAFCG 60

Query: 61 ALKNLLFLATDHKDT 75
          ALKNLLFLATDHKDT
Sbjct: 61 ALKNLLFLATDHKDT 75

The following BLAST results are available for this feature:
BLAST of Csor.00g235470 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g235470 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6593742.15.91e-48100.00hypothetical protein SDJN03_13218, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g235470 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g235470 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g235470.m01Csor.00g235470.m01mRNA