Csor.00g235350 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g235350
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionNADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3
LocationCsor_Chr08: 6396080 .. 6398535 (-)
RNA-Seq ExpressionCsor.00g235350
SyntenyCsor.00g235350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCGAGACAGAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCATTAGAAAAGATCGCCGGAGACCTGGTCTCAGCCAGCCTCTACCGTCATTGAGACGCGCGTTTTCACTATACGATCAGATCAATCTCATCGATAATGTTCCTGAGGATCAGCTTCGCTTTCAACGGTTCAACCCTAACTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCCTCCTTTTGCATCGATTTCTTCCTCGATTTCATATTGTTGTTTCTTTTCTGTTGGAATTTAAGGTATACTGAGACGGGTTTCACTGTGAACGGACTTGATTATGAGGGGAGCTTGCTATGCGTTGGGAATTTGTTGATGTCTTGGAGTCCTAAGAAATTTTCGGAGATTACGCCTGAGAGGTTTGCTATGCATTTCTTCTTATTTAGTTTACAATATTTTGTTTACTAACTACTTCTTTTATGGTGATTGAAATGTATCTTTTGCAGCTTATCTATCTTCCAAATTATGCGGCCTATTCCAGGTAAAATCTGGTGTTGTGATTGAATAAAGGATTGAATTATTGAACATTGTTTAATTAGTTCAAATATGAATGTCTGGAGTTACCTAGTTTGACGTTTCTCTTGAGCTATTTTTCTCTGAGTTTTCATTTCTTGGTTATGATATTTTTTCTTGTCTGTGAACGAGCAAGGTCCTTCATGGTTCGATCTCTCTGTGCCTGAGCACAAGACAGACTTCATCATTTGTTTCTTTTTGTAGTACTACCACATGTCACAGTAGAAATTCAAACTTCCAATTTTCGGAGAGTATACGGATATTGTGACACGCCATTTTTTTGTTAAATCTAGGACACGGACACCGATCCGACAAGGACATGTTTATGAAAATATACAACTTTGAAAATGTTTATCATTTTTATACAAAAAGGAAATTACATCTTGTTTGATGTGTTTGATAAATATTGCGTCTATATTGATTTTGTACAACCAATGTATAAAATATTATTGTGCTAGCAAGTGTCGAGGAGTGTCCATTTCAACATAGATACACTAGTCAAACTAAAGTGTCCGTGCTTCTTAGTCTGGGATATATCAAAATATAATGTTAGCAGCCTGTGGATGACACATATATGGTGTAAGGATGACACATATATGGTGTACTTTTGTTGTTCATACTATTGATGGCTTCCTTTCTTAGGCATGCTTCTAATGTCTTAAGCTGCCCTGTTAACCAAATGTTGTATTTACTTTTCAACACTCAGTCATCACCTTAATGCATCTACTGTTCATATGTTGCTCTGTGCAAGCAAAATTTATTGAGTTCTACCATTAGCTGATTACTTTTCTTCATATGAAAGCTTGATTATTTTCTCTCTAATTTCAGAAATTCTAGTGCTTGGCTGTGGAAGATATATTGAACCAGTTAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACTCGGTACTTACGGTTTGAACTTACATCGGTTTATTTTATAATTGGACCTGTTTATAGTACCTCAGAGATGAGATAAATATTTTTCATGCAACACAAAATCTAGATATTGAGCTATTTTACGTGCCTGAGACTGATTGGTGGGAAAATGGTATATTCTTTTTTTAGGATAAGAAACAGGATTTTGTAACATTAACTAAAACGAGGAGGGAAAACATCTACCAACCCTAGTGGCCTAGTCAAAAGAGATTGTAGAATCGTTACTGTATTGTCTGGTTAGGGATATCCCACATCGATTGGGGAGGAGGACAAAACACCCCTTACCTTTATAAGGGTGTGGAAACCTCTCCTTAGCAGATGCGTTTTAAAGCCTTTGGGGGGAAGTCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAGTGGTGGGTTTAGGCCGTTACAAATGGTATCAGTGCCAGATACTGGGTGATGTGTCAGCAAGGAGGCTGAGCCCCGAAGGGGGGTGAACACGAGCCAGTGTGCTAGTAAGGACGCTGGGCTCCGAAGTGGGTGGATTGGAGGGTCATTGAAGAGGAGAGCGAGTGCCTGCGAGGATGTTGGACCCTGAAGGGGGTGGATTGTAATATTCCACATCGATTGAGAAAGAGAACGGAACACCCTTTAGTGGTGGGCTTAGGCCGTTACAATAGTAGGGAAGTAGGGAATGATGCAGAAACCTCATCCATATTTATCTCTAAAATCAGGGTAATATGTATATAGGAATGAAACATGAGCTCTTATGGCAAAATGGACATTCTCTTTTTGCTGCATCCCTTGTGTTTTGATAATAATGAAGATACATGAAACGTGGTGTTATTGCTCATTATACCAACAAAATTGGGTTATTTGCAGAGAAATGCAGCATCAACATACAACATCTTAAATGAGGAAGGTAGAATTGTAGCTGCAGCTCTTCTGCCTTACGGAGTTTCTTCATGA

mRNA sequence

ATGGCGGCGAGACAGAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCATTAGAAAAGATCGCCGGAGACCTGGTCTCAGCCAGCCTCTACCGTCATTGAGACGCGCGTTTTCACTATACGATCAGATCAATCTCATCGATAATGTTCCTGAGGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGTTTCACTGTGAACGGACTTGATTATGAGGGGAGCTTGCTATGCGTTGGGAATTTGTTGATGTCTTGGAGTCCTAAGAAATTTTCGGAGATTACGCCTGAGAGCTTATCTATCTTCCAAATTATGCGGCCTATTCCAGAAATTCTAGTGCTTGGCTGTGGAAGATATATTGAACCAGTTAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACTCGAGAAATGCAGCATCAACATACAACATCTTAAATGAGGAAGGTAGAATTGTAGCTGCAGCTCTTCTGCCTTACGGAGTTTCTTCATGA

Coding sequence (CDS)

ATGGCGGCGAGACAGAAAGCGGTGGCGACGCTGCCGAATCTCATCAGAAGCATTAGAAAAGATCGCCGGAGACCTGGTCTCAGCCAGCCTCTACCGTCATTGAGACGCGCGTTTTCACTATACGATCAGATCAATCTCATCGATAATGTTCCTGAGGATCAGCTTCGCTTTCAACGGTATACTGAGACGGGTTTCACTGTGAACGGACTTGATTATGAGGGGAGCTTGCTATGCGTTGGGAATTTGTTGATGTCTTGGAGTCCTAAGAAATTTTCGGAGATTACGCCTGAGAGCTTATCTATCTTCCAAATTATGCGGCCTATTCCAGAAATTCTAGTGCTTGGCTGTGGAAGATATATTGAACCAGTTAATCCTGAATTGAGGCAGTTCATTCGTTCCACTGGCATGAAGTTGGAAGCTGTAGACTCGAGAAATGCAGCATCAACATACAACATCTTAAATGAGGAAGGTAGAATTGTAGCTGCAGCTCTTCTGCCTTACGGAGTTTCTTCATGA

Protein sequence

MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRYTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYIEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS
Homology
[Close]
BLAST of Csor.00g235350 vs. ExPASy Swiss-Prot
Match: Q6DFN1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus tropicalis OX=8364 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-16
Identity = 40/109 (36.70%), Postives = 65/109 (59.63%), Query Frame = 0 

Query: 58  QRYTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCG 117
           + Y+  GF +NG    G    +   ++ W+   + +I  ESLS+F ++ P  EILV+G G
Sbjct: 66  ETYSSQGFIINGDKVVGPCAVIPKAILQWNVGSYKDINLESLSLFHMLSPRIEILVVGTG 125

Query: 118 RYIEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLP 167
             +E ++P + +F+R  G+ +E  D+ NA +T+N L  E RI AAAL+P
Sbjct: 126 DRVERLDPNILKFMRQKGVAVEVQDTANACATFNFLVSERRITAAALIP 174

[Close]
BLAST of Csor.00g235350 vs. ExPASy Swiss-Prot
Match: O08776 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus norvegicus OX=10116 GN=Ndufaf3 PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 3.2e-15
Identity = 42/124 (33.87%), Postives = 68/124 (54.84%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQRYTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIF 102
           +I+L+ N     +    Y   GFT+NG    G    +   ++ W+     +IT ES SIF
Sbjct: 47  RISLLQNEFPQAVYIDSYNSRGFTINGNRVFGPCALLPQTVVQWNVGSHQDITEESFSIF 106

Query: 103 QIMRPIPEILVLGCGRYIEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAA 162
            ++ P  EI+V+G G   E ++ ++ Q +R  G+ +E  D+ NA +T+N L  EGR+  A
Sbjct: 107 WMLEPRIEIVVVGTGNKTERLHSQVLQAMRQRGIAVEIQDTPNACATFNFLCHEGRVTGA 166

Query: 163 ALLP 167
           AL+P
Sbjct: 167 ALIP 170

[Close]
BLAST of Csor.00g235350 vs. ExPASy Swiss-Prot
Match: Q9JKL4 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musculus OX=10090 GN=Ndufaf3 PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 9.2e-15
Identity = 40/124 (32.26%), Postives = 70/124 (56.45%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQRYTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIF 102
           +I+L+ +     +    Y+  GFT+ G    G  + +   ++ W+     +IT ES S+F
Sbjct: 47  RISLLQSEFPQAVYIDSYSSRGFTICGNRVFGPCVLLPQTVVQWNVGSHQDITEESFSLF 106

Query: 103 QIMRPIPEILVLGCGRYIEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAA 162
            ++ P  EI+V+G G   E ++P++ Q +R  G+ +E  D+ NA +T+N L  EGR+  A
Sbjct: 107 WMLEPRIEIVVVGTGNKTERLHPQVLQAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGA 166

Query: 163 ALLP 167
           AL+P
Sbjct: 167 ALIP 170

[Close]
BLAST of Csor.00g235350 vs. ExPASy Swiss-Prot
Match: Q2HJI2 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taurus OX=9913 GN=NDUFAF3 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.7e-14
Identity = 40/124 (32.26%), Postives = 67/124 (54.03%), Query Frame = 0 

Query: 43  QINLIDNVPEDQLRFQRYTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIF 102
           +I+L+       +    Y+  GF VNG    G    +   ++ W+   + +IT ES S+F
Sbjct: 46  RISLLQRESPLAMYIDSYSSRGFVVNGNRVFGPCALLPQSVVQWNVGSYQDITEESFSLF 105

Query: 103 QIMRPIPEILVLGCGRYIEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAA 162
            ++ P  EI+V+G G   E + P + + +R  G+ +E  D+ NA +T+N L  EGR+  A
Sbjct: 106 WMLEPRIEIVVVGTGDRTERLQPHVLRAMRQRGIAVEVQDTPNACATFNFLCHEGRVTGA 165

Query: 163 ALLP 167
           AL+P
Sbjct: 166 ALIP 169

[Close]
BLAST of Csor.00g235350 vs. ExPASy Swiss-Prot
Match: A1L1F1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio rerio OX=7955 GN=ndufaf3 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 3.5e-14
Identity = 38/107 (35.51%), Postives = 64/107 (59.81%), Query Frame = 0 

Query: 60  YTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRY 119
           Y+  GF +NG    G    +   ++ W+    S+I+ ESLS+F ++ P  E+LVLG G  
Sbjct: 62  YSPRGFNINGNTVFGPCAVLPPAILQWNVGSHSDISVESLSLFYLLEPQIEVLVLGTGAR 121

Query: 120 IEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLP 167
            E ++ E+ + ++  G+ +E  D+ NA +T+N L+ E R+ AAAL+P
Sbjct: 122 TERLHAEVLEELKKRGIAVEVQDTPNACATFNFLSSEKRLAAAALIP 168

[Close]
BLAST of Csor.00g235350 vs. NCBI nr
Match: XP_023513625.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita pepo subsp. pepo] >KAG6593730.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026069.1 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 337 bits (865), Expect = 1.02e-116
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. NCBI nr
Match: XP_022964366.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita moschata])

HSP 1 Score: 336 bits (862), Expect = 2.92e-116
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNP+LRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPQLRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. NCBI nr
Match: XP_023000217.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucurbita maxima])

HSP 1 Score: 329 bits (844), Expect = 1.62e-113
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQWY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNGLDYEGSLLCVG+LLMSWSPKKFSEITPESLSIFQI+RPIPEILVLGCGRYI
Sbjct: 61  TETGFTVNGLDYEGSLLCVGDLLMSWSPKKFSEITPESLSIFQIIRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNPELRQFIRSTGMKLEAVDSRNA STYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDSRNATSTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. NCBI nr
Match: XP_038906819.1 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benincasa hispida])

HSP 1 Score: 328 bits (842), Expect = 3.27e-113
Identity = 164/171 (95.91%), Postives = 169/171 (98.83%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS+R DRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSLRNDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNG+DYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQI+RPIPEIL+LGCGRY 
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIVRPIPEILILGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNPELRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. NCBI nr
Match: XP_008460070.1 (PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucumis melo] >KAA0039965.1 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 319 bits (818), Expect = 1.49e-109
Identity = 158/171 (92.40%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+++ DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNG+DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQI+RPIPEILVLGCGRY 
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNPELRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. ExPASy TrEMBL
Match: A0A6J1HIQ3 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita moschata OX=3662 GN=LOC111464400 PE=4 SV=1)

HSP 1 Score: 336 bits (862), Expect = 1.41e-116
Identity = 170/171 (99.42%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI
Sbjct: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNP+LRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPQLRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. ExPASy TrEMBL
Match: A0A6J1KD25 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbita maxima OX=3661 GN=LOC111494507 PE=4 SV=1)

HSP 1 Score: 329 bits (844), Expect = 7.85e-114
Identity = 167/171 (97.66%), Postives = 169/171 (98.83%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQ Y
Sbjct: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQWY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNGLDYEGSLLCVG+LLMSWSPKKFSEITPESLSIFQI+RPIPEILVLGCGRYI
Sbjct: 61  TETGFTVNGLDYEGSLLCVGDLLMSWSPKKFSEITPESLSIFQIIRPIPEILVLGCGRYI 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNPELRQFIRSTGMKLEAVDSRNA STYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDSRNATSTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. ExPASy TrEMBL
Match: A0A5A7TES8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002470 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 7.24e-110
Identity = 158/171 (92.40%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+++ DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNG+DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQI+RPIPEILVLGCGRY 
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNPELRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. ExPASy TrEMBL
Match: A0A1S3CB84 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis melo OX=3656 GN=LOC103498992 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 7.24e-110
Identity = 158/171 (92.40%), Postives = 168/171 (98.25%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLP+LIR+++ DRR+PG SQPLPSLRRAFSLYDQINLIDNVP+DQLRFQRY
Sbjct: 1   MAARQKAVATLPSLIRTLKNDRRKPGFSQPLPSLRRAFSLYDQINLIDNVPKDQLRFQRY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRYI 120
           TETGFTVNG+DYEGSLLCVGNLLMSWSPKKFSEITP+SLSIFQI+RPIPEILVLGCGRY 
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPKKFSEITPDSLSIFQIVRPIPEILVLGCGRYT 120

Query: 121 EPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           EPVNPELRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 EPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 171

[Close]
BLAST of Csor.00g235350 vs. ExPASy TrEMBL
Match: A0A6J1DND7 (LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 OS=Momordica charantia OX=3673 GN=LOC111022818 PE=4 SV=1)

HSP 1 Score: 301 bits (771), Expect = 1.30e-102
Identity = 154/177 (87.01%), Postives = 163/177 (92.09%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60
           MAARQKAVATLPNLIRS+RKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY
Sbjct: 1   MAARQKAVATLPNLIRSLRKDRRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQRY 60

Query: 61  TETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIF------QIMRPIPEILVL 120
           TETGFTVNG+DYEGSLLCVGNLLMSWSP+KFSEIT ES  +F       ++  I EIL+L
Sbjct: 61  TETGFTVNGVDYEGSLLCVGNLLMSWSPRKFSEITAESXXLFLTWRLVYLLSLISEILLL 120

Query: 121 GCGRYIEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 171
           GCG+Y EPVNPELRQFIRSTGMKLEAVD+RNAASTYNILNEEGRIVAAALLPYGVSS
Sbjct: 121 GCGKYTEPVNPELRQFIRSTGMKLEAVDTRNAASTYNILNEEGRIVAAALLPYGVSS 177

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BLAST of Csor.00g235350 vs. TAIR 10
Match: AT3G60150.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 262.7 bits (670), Expect = 2.1e-70
Identity = 131/172 (76.16%), Postives = 152/172 (88.37%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKD-RRRPGLSQPLPSLRRAFSLYDQINLIDNVPEDQLRFQR 60
           MA RQKA+ATLP LI+S+R +  ++P L   LPSLRRAFSLYDQINLIDNVPEDQLRFQ 
Sbjct: 1   MAVRQKAMATLPKLIQSMRNEVTKQPSL--VLPSLRRAFSLYDQINLIDNVPEDQLRFQE 60

Query: 61  YTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRY 120
           + ET FTVNG+ YEGSLLCVGNLLMSWSP+ FS+IT +SLSIFQ +RPIPE+L++GCGRY
Sbjct: 61  FDETSFTVNGVKYEGSLLCVGNLLMSWSPRYFSDITTDSLSIFQTVRPIPELLIVGCGRY 120

Query: 121 IEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 172
             P+NP++RQF++S GMKLE VDSRNAASTYNILNEEGRIVAAALLPYGV+S
Sbjct: 121 NHPLNPQVRQFVKSIGMKLETVDSRNAASTYNILNEEGRIVAAALLPYGVTS 170

[Close]
BLAST of Csor.00g235350 vs. TAIR 10
Match: AT2G44525.1 (Protein of unknown function (DUF498/DUF598) )

HSP 1 Score: 262.3 bits (669), Expect = 2.7e-70
Identity = 132/172 (76.74%), Postives = 151/172 (87.79%), Query Frame = 0 

Query: 1   MAARQKAVATLPNLIRSIRKDRRRPGLSQP-LPSLRRAFSLYDQINLIDNVPEDQLRFQR 60
           MA R K++ATLP LI+S+RK+   P  S P LPSLRRAFSLYDQINLIDNVPEDQLRFQ 
Sbjct: 1   MAMRLKSMATLPKLIQSMRKE--VPKHSNPVLPSLRRAFSLYDQINLIDNVPEDQLRFQE 60

Query: 61  YTETGFTVNGLDYEGSLLCVGNLLMSWSPKKFSEITPESLSIFQIMRPIPEILVLGCGRY 120
           + +T FTVNG+ YEGSLLCVGNLLMSWSP+KFSEIT +SLSIFQ +RPIPE+L++GCGR 
Sbjct: 61  FNDTSFTVNGVKYEGSLLCVGNLLMSWSPRKFSEITTDSLSIFQTVRPIPELLIVGCGRD 120

Query: 121 IEPVNPELRQFIRSTGMKLEAVDSRNAASTYNILNEEGRIVAAALLPYGVSS 172
           I PV PE+RQF++S GMKLE VDSRNAASTYNILNEEGR+VAAALLPYGV+S
Sbjct: 121 IHPVTPEVRQFVKSLGMKLETVDSRNAASTYNILNEEGRVVAAALLPYGVTS 170

The following BLAST results are available for this feature:
BLAST of Csor.00g235350 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6DFN14.9e-1636.70NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Xenopus ... [more]
O087763.2e-1533.87NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Rattus n... [more]
Q9JKL49.2e-1532.26NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Mus musc... [more]
Q2HJI22.7e-1432.26NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Bos taur... [more]
A1L1F13.5e-1435.51NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Danio re... [more]
BLAST of Csor.00g235350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023513625.11.02e-116100.00NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_022964366.12.92e-11699.42NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_023000217.11.62e-11397.66NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Cucur... [more]
XP_038906819.13.27e-11395.91NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-like [Benin... [more]
XP_008460070.11.49e-10992.40PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3-... [more]
BLAST of Csor.00g235350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HIQ31.41e-11699.42NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit... [more]
A0A6J1KD257.85e-11497.66NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucurbit... [more]
A0A5A7TES87.24e-11092.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ... [more]
A0A1S3CB847.24e-11092.40NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 OS=Cucumis ... [more]
A0A6J1DND71.30e-10287.01LOW QUALITY PROTEIN: uncharacterized protein LOC111022818 OS=Momordica charantia... [more]
BLAST of Csor.00g235350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G60150.12.1e-7076.16Protein of unknown function (DUF498/DUF598) [more]
AT2G44525.12.7e-7076.74Protein of unknown function (DUF498/DUF598) [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036748MTH938-like superfamilyGENE3D3.40.1230.10coord: 41..167
e-value: 5.4E-34
score: 118.5
IPR036748MTH938-like superfamilySUPERFAMILY64076MTH938-likecoord: 44..167
IPR007523NDUFAF3/Mth938 domain-containing proteinPFAMPF04430DUF498coord: 58..165
e-value: 6.0E-31
score: 106.7
IPR007523NDUFAF3/Mth938 domain-containing proteinPANTHERPTHR21192NUCLEAR PROTEIN E3-3coord: 1..171
NoneNo IPR availablePANTHERPTHR21192:SF4BNAC04G03830D PROTEINcoord: 1..171
IPR034095NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3CDDcd05125Mth938_2P1-likecoord: 60..168
e-value: 3.11538E-44
score: 140.413

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g235350.m01Csor.00g235350.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032981 mitochondrial respiratory chain complex I assembly
cellular_component GO:0005743 mitochondrial inner membrane
cellular_component GO:0005634 nucleus