Csor.00g234400 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g234400
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptiontwo-component response regulator ORR26-like
LocationCsor_Chr04: 15308592 .. 15308834 (-)
RNA-Seq ExpressionCsor.00g234400
SyntenyCsor.00g234400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAATCCTAGACTGCTTGTTAGCGCCAACTTTGTAAATCATGGTCTCAGAATGCTTGACCACAATTTTCAGTATGTTGCTTCAAACTACAATTCAGTTCCATATAGCATCAATAAGACGACTCTTGAGGTAACTTCTTTTCGTGTATTTGATGAAATTCAGTTCCCAGATATACATCAAGCTGATGTAGCTCAGCAGCTAGAAGCAATGGAATTTAGTGGCACATCAGAAGGGATTTAG

mRNA sequence

ATGCCTAATCCTAGACTGCTTGTTAGCGCCAACTTTGTAAATCATGGTCTCAGAATGCTTGACCACAATTTTCAGTATGTTGCTTCAAACTACAATTCAGTTCCATATAGCATCAATAAGACGACTCTTGAGGTAACTTCTTTTCGTGTATTTGATGAAATTCAGTTCCCAGATATACATCAAGCTGATGTAGCTCAGCAGCTAGAAGCAATGGAATTTAGTGGCACATCAGAAGGGATTTAG

Coding sequence (CDS)

ATGCCTAATCCTAGACTGCTTGTTAGCGCCAACTTTGTAAATCATGGTCTCAGAATGCTTGACCACAATTTTCAGTATGTTGCTTCAAACTACAATTCAGTTCCATATAGCATCAATAAGACGACTCTTGAGGTAACTTCTTTTCGTGTATTTGATGAAATTCAGTTCCCAGATATACATCAAGCTGATGTAGCTCAGCAGCTAGAAGCAATGGAATTTAGTGGCACATCAGAAGGGATTTAG

Protein sequence

MPNPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIHQADVAQQLEAMEFSGTSEGI
Homology
BLAST of Csor.00g234400 vs. NCBI nr
Match: KAG6601826.1 (hypothetical protein SDJN03_07059, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 162 bits (411), Expect = 2.15e-50
Identity = 80/80 (100.00%), Postives = 80/80 (100.00%), Query Frame = 0

Query: 1  MPNPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIH 60
          MPNPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIH
Sbjct: 1  MPNPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIH 60

Query: 61 QADVAQQLEAMEFSGTSEGI 80
          QADVAQQLEAMEFSGTSEGI
Sbjct: 61 QADVAQQLEAMEFSGTSEGI 80

BLAST of Csor.00g234400 vs. NCBI nr
Match: KAG7032530.1 (hypothetical protein SDJN02_06579 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 149 bits (375), Expect = 8.84e-43
Identity = 74/80 (92.50%), Postives = 77/80 (96.25%), Query Frame = 0

Query: 1   MPNPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIH 60
           +PNPRLLVSANFVNHGLRMLDHNFQ+VASNYNSVPYSINKTT +VTS RVFDEIQF DIH
Sbjct: 73  VPNPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSINKTTPKVTSSRVFDEIQFSDIH 132

Query: 61  QADVAQQLEAMEFSGTSEGI 80
           QADVAQQLEAMEFSGTSEGI
Sbjct: 133 QADVAQQLEAMEFSGTSEGI 152

BLAST of Csor.00g234400 vs. NCBI nr
Match: XP_023513269.1 (putative two-component response regulator-like APRR6 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147 bits (371), Expect = 1.76e-40
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0

Query: 1   MPNPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIH 60
           +PNPRLLVSANFVNHGLRMLDHNFQ+V SNYNSVPYSINK TLEVTS RVF+EIQF DIH
Sbjct: 307 VPNPRLLVSANFVNHGLRMLDHNFQHVGSNYNSVPYSINKMTLEVTSSRVFNEIQFSDIH 366

Query: 61  QADVAQQLEAMEFSGTSEGI 80
           QADVAQQLEAMEFSGTSEGI
Sbjct: 367 QADVAQQLEAMEFSGTSEGI 386

BLAST of Csor.00g234400 vs. NCBI nr
Match: XP_023513263.1 (two-component response regulator ARR14-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 147 bits (371), Expect = 3.57e-40
Identity = 73/80 (91.25%), Postives = 76/80 (95.00%), Query Frame = 0

Query: 1   MPNPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIH 60
           +PNPRLLVSANFVNHGLRMLDHNFQ+V SNYNSVPYSINK TLEVTS RVF+EIQF DIH
Sbjct: 348 VPNPRLLVSANFVNHGLRMLDHNFQHVGSNYNSVPYSINKMTLEVTSSRVFNEIQFSDIH 407

Query: 61  QADVAQQLEAMEFSGTSEGI 80
           QADVAQQLEAMEFSGTSEGI
Sbjct: 408 QADVAQQLEAMEFSGTSEGI 427

BLAST of Csor.00g234400 vs. NCBI nr
Match: XP_022990810.1 (two-component response regulator ORR26-like [Cucurbita maxima])

HSP 1 Score: 145 bits (367), Expect = 4.84e-39
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0

Query: 3   NPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIHQA 62
           NPRLLVSANFVNHGLRMLDHNFQ+VASNYNSVPYSINKTT EVTS+R FDEIQFPD+HQ 
Sbjct: 381 NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSINKTTPEVTSYRAFDEIQFPDMHQV 440

Query: 63  DVAQQLEAMEFSGTSEGI 80
           DVAQQLEAMEF GTSEGI
Sbjct: 441 DVAQQLEAMEFIGTSEGI 458

BLAST of Csor.00g234400 vs. ExPASy TrEMBL
Match: A0A6J1JR42 (two-component response regulator ORR26-like OS=Cucurbita maxima OX=3661 GN=LOC111487593 PE=4 SV=1)

HSP 1 Score: 145 bits (367), Expect = 2.35e-39
Identity = 71/78 (91.03%), Postives = 74/78 (94.87%), Query Frame = 0

Query: 3   NPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIHQA 62
           NPRLLVSANFVNHGLRMLDHNFQ+VASNYNSVPYSINKTT EVTS+R FDEIQFPD+HQ 
Sbjct: 381 NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYSINKTTPEVTSYRAFDEIQFPDMHQV 440

Query: 63  DVAQQLEAMEFSGTSEGI 80
           DVAQQLEAMEF GTSEGI
Sbjct: 441 DVAQQLEAMEFIGTSEGI 458

BLAST of Csor.00g234400 vs. ExPASy TrEMBL
Match: A0A6J1GKU9 (putative two-component response regulator-like APRR6 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111455231 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 6.94e-39
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 3   NPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIHQA 62
           NPRLLVSANFVNHGLRMLDHNFQ+VASNYNSVPY+INKTT EVTS+R FDEIQFPDIHQ 
Sbjct: 390 NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNINKTTPEVTSYRAFDEIQFPDIHQV 449

Query: 63  DVAQQLEAMEFSGTSEGI 80
           D AQQLEAMEF GTSEGI
Sbjct: 450 DAAQQLEAMEFCGTSEGI 467

BLAST of Csor.00g234400 vs. ExPASy TrEMBL
Match: A0A6J1GL19 (putative two-component response regulator-like APRR6 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455231 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 7.67e-39
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 3   NPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIHQA 62
           NPRLLVSANFVNHGLRMLDHNFQ+VASNYNSVPY+INKTT EVTS+R FDEIQFPDIHQ 
Sbjct: 400 NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNINKTTPEVTSYRAFDEIQFPDIHQV 459

Query: 63  DVAQQLEAMEFSGTSEGI 80
           D AQQLEAMEF GTSEGI
Sbjct: 460 DAAQQLEAMEFCGTSEGI 477

BLAST of Csor.00g234400 vs. ExPASy TrEMBL
Match: A0A6J1GM46 (putative two-component response regulator-like APRR6 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455231 PE=4 SV=1)

HSP 1 Score: 144 bits (364), Expect = 7.90e-39
Identity = 70/78 (89.74%), Postives = 73/78 (93.59%), Query Frame = 0

Query: 3   NPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIHQA 62
           NPRLLVSANFVNHGLRMLDHNFQ+VASNYNSVPY+INKTT EVTS+R FDEIQFPDIHQ 
Sbjct: 403 NPRLLVSANFVNHGLRMLDHNFQHVASNYNSVPYNINKTTPEVTSYRAFDEIQFPDIHQV 462

Query: 63  DVAQQLEAMEFSGTSEGI 80
           D AQQLEAMEF GTSEGI
Sbjct: 463 DAAQQLEAMEFCGTSEGI 480

BLAST of Csor.00g234400 vs. ExPASy TrEMBL
Match: A0A6J1I817 (putative two-component response regulator-like APRR6 OS=Cucurbita maxima OX=3661 GN=LOC111470486 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.69e-19
Identity = 53/88 (60.23%), Postives = 59/88 (67.05%), Query Frame = 0

Query: 1   MPNPRLLVSANFVNHGLRMLDHNFQYVASNYNSVPYSINKTTLEVTSFRVFDEIQFPDIH 60
           +P+P+L VSANF NHGL ML  NFQ V SNYNSVPY IN+TT +VTS  VFDE QF D H
Sbjct: 313 VPSPKLPVSANFANHGLIMLGQNFQPVDSNYNSVPYIINQTTPKVTSSCVFDETQFSDNH 372

Query: 61  QADVAQQL--------EAMEFSGTSEGI 80
              V Q L        EAM  +GTSEGI
Sbjct: 373 LDVVQQDLTTFKIENQEAMGCNGTSEGI 400

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6601826.12.15e-50100.00hypothetical protein SDJN03_07059, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7032530.18.84e-4392.50hypothetical protein SDJN02_06579 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_023513269.11.76e-4091.25putative two-component response regulator-like APRR6 isoform X2 [Cucurbita pepo ... [more]
XP_023513263.13.57e-4091.25two-component response regulator ARR14-like isoform X1 [Cucurbita pepo subsp. pe... [more]
XP_022990810.14.84e-3991.03two-component response regulator ORR26-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A6J1JR422.35e-3991.03two-component response regulator ORR26-like OS=Cucurbita maxima OX=3661 GN=LOC11... [more]
A0A6J1GKU96.94e-3989.74putative two-component response regulator-like APRR6 isoform X3 OS=Cucurbita mos... [more]
A0A6J1GL197.67e-3989.74putative two-component response regulator-like APRR6 isoform X2 OS=Cucurbita mos... [more]
A0A6J1GM467.90e-3989.74putative two-component response regulator-like APRR6 isoform X1 OS=Cucurbita mos... [more]
A0A6J1I8172.69e-1960.23putative two-component response regulator-like APRR6 OS=Cucurbita maxima OX=3661... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g234400.m01Csor.00g234400.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000160 phosphorelay signal transduction system
biological_process GO:0016310 phosphorylation
molecular_function GO:0003677 DNA binding
molecular_function GO:0016301 kinase activity