Csor.00g234290 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g234290
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	leucine-rich repeat extensin-like protein 3
Location	Csor_Chr04: 15680278 .. 15680694 (-)
RNA-Seq Expression	Csor.00g234290
Synteny	Csor.00g234290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCGCCCTCCTCCTTCTAATCTCCCCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGCCGACCCCACCGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCATCTACTACTCTCCTCCTCCCCCCCCTAAGAAGGATCACAAGAACGACGACTGCCCACCGCCGCCGGCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAAAGTTATAACGCTGCCGCCCGGAGACTCGTCTCCGCCGCAGCCTCCGCCGTGGTTGGGTTGGCTGTTGTTGGGGTTCTGATGATGTAA

mRNA sequence

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCGCCCTCCTCCTTCTAATCTCCCCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGCCGACCCCACCGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCATCTACTACTCTCCTCCTCCCCCCCCTAAGAAGGATCACAAGAACGACGACTGCCCACCGCCGCCGGCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAAAGTTATAACGCTGCCGCCCGGAGACTCGTCTCCGCCGCAGCCTCCGCCGTGGTTGGGTTGGCTGTTGTTGGGGTTCTGATGATGTAA

Coding sequence (CDS)

ATGCTTCCTTTCAATTCTCTCCTCTTTCTCGCCCTCCTCCTTCTAATCTCCCCCTCCTCCTCCTCCGCCGCCGTTCGCCGCCTCGACGACACCCCCGCCGACCCCACCGTCAAGTGCTCCCCATGTGAACAAAACCCCCCATCTCCTCCTCCTCCACCGGTCTACCCCTCCCCTCCGCCGCCCTCTCCTCCACCGCCGGACGTTGTCATCTACTACTCTCCTCCTCCCCCCCCTAAGAAGGATCACAAGAACGACGACTGCCCACCGCCGCCGGCTCCCAACTTCATGTACATAACCGGCCCTCCCGGCGACCTCTACCCCATCGACCAAAGTTATAACGCTGCCGCCCGGAGACTCGTCTCCGCCGCAGCCTCCGCCGTGGTTGGGTTGGCTGTTGTTGGGGTTCTGATGATGTAA

Protein sequence

MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLVSAAASAVVGLAVVGVLMM

Homology

[Close]

BLAST of Csor.00g234290 vs. NCBI nr
Match: KAG6601837.1 (hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250 bits (638), Expect = 3.52e-83
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP 60
           MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP 60

Query: 61  PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLV 120
           PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLV
Sbjct: 61  PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLV 120

Query: 121 SAAASAVVGLAVVGVLMM 138
           SAAASAVVGLAVVGVLMM
Sbjct: 121 SAAASAVVGLAVVGVLMM 138

[Close]

BLAST of Csor.00g234290 vs. NCBI nr
Match: KAG7032543.1 (hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 247 bits (631), Expect = 4.11e-82
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP 60
           MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP 60

Query: 61  PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLV 120
           PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA+RRLV
Sbjct: 61  PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAASRRLV 120

Query: 121 SAAASAVVGLAVVGVLMM 138
           SAAASAVVGLAV GVLMM
Sbjct: 121 SAAASAVVGLAVAGVLMM 138

[Close]

BLAST of Csor.00g234290 vs. NCBI nr
Match: XP_022953268.1 (extensin [Cucurbita moschata])

HSP 1 Score: 246 bits (627), Expect = 1.67e-81
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP 60
           MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP 60

Query: 61  PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLV 120
           PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA+RRLV
Sbjct: 61  PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAASRRLV 120

Query: 121 SAAASAVVGLAVVGVLMM 138
           S AASAVVGLAV GVLMM
Sbjct: 121 STAASAVVGLAVAGVLMM 138

[Close]

BLAST of Csor.00g234290 vs. NCBI nr
Match: XP_023520933.1 (extensin [Cucurbita pepo subsp. pepo] >XP_023521360.1 extensin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234 bits (598), Expect = 4.57e-77
Identity = 130/138 (94.20%), Postives = 134/138 (97.10%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPP-VYPSPP 60
           MLPFNSLLFL LLLLISPSSSSAAVRRLDDTP DPTVKCSPCEQNPPSPPPPP VYPSPP
Sbjct: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPTDPTVKCSPCEQNPPSPPPPPPVYPSPP 60

Query: 61  PPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRL 120
           PPSPPPPDVVIYYSPPPPPKKDHKN+DCPPPP+PNFMYITGPPGDLYPIDQ+YNAAARRL
Sbjct: 61  PPSPPPPDVVIYYSPPPPPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAAARRL 120

Query: 121 VSAAASAVVGLAVVGVLM 137
           VSAAASAV+GLAV GVLM
Sbjct: 121 VSAAASAVIGLAVAGVLM 138

[Close]

BLAST of Csor.00g234290 vs. NCBI nr
Match: XP_022989990.1 (leucine-rich repeat extensin-like protein 3 [Cucurbita maxima])

HSP 1 Score: 228 bits (582), Expect = 1.39e-74
Identity = 129/142 (90.85%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTP-----ADPTVKCSPCEQNPPSPPPPPVY 60
           MLPFNSLLFL LLLLISPSSSSAAVRRLDDTP     ADPTVKCSPCEQNPPSPPPPPVY
Sbjct: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60

Query: 61  PSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA 120
           PSPPPPSPPPPDVV+YYSPP PPKKDHKN+DCPPPP+PNFMYITGPPGDLYPIDQ+YNAA
Sbjct: 61  PSPPPPSPPPPDVVVYYSPP-PPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAA 120

Query: 121 ARRLVSAAASAVVGLAVVGVLM 137
           ARRLVSAAASAV+GLAV GVLM
Sbjct: 121 ARRLVSAAASAVIGLAVAGVLM 141

[Close]

BLAST of Csor.00g234290 vs. ExPASy TrEMBL
Match: A0A6J1GMY1 (extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1)

HSP 1 Score: 246 bits (627), Expect = 8.11e-82
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP 60
           MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP
Sbjct: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPP 60

Query: 61  PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLV 120
           PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA+RRLV
Sbjct: 61  PSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAASRRLV 120

Query: 121 SAAASAVVGLAVVGVLMM 138
           S AASAVVGLAV GVLMM
Sbjct: 121 STAASAVVGLAVAGVLMM 138

[Close]

BLAST of Csor.00g234290 vs. ExPASy TrEMBL
Match: A0A6J1JNW0 (leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111487018 PE=4 SV=1)

HSP 1 Score: 228 bits (582), Expect = 6.72e-75
Identity = 129/142 (90.85%), Postives = 134/142 (94.37%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSSSAAVRRLDDTP-----ADPTVKCSPCEQNPPSPPPPPVY 60
           MLPFNSLLFL LLLLISPSSSSAAVRRLDDTP     ADPTVKCSPCEQNPPSPPPPPVY
Sbjct: 1   MLPFNSLLFLTLLLLISPSSSSAAVRRLDDTPVSATPADPTVKCSPCEQNPPSPPPPPVY 60

Query: 61  PSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAA 120
           PSPPPPSPPPPDVV+YYSPP PPKKDHKN+DCPPPP+PNFMYITGPPGDLYPIDQ+YNAA
Sbjct: 61  PSPPPPSPPPPDVVVYYSPP-PPKKDHKNNDCPPPPSPNFMYITGPPGDLYPIDQNYNAA 120

Query: 121 ARRLVSAAASAVVGLAVVGVLM 137
           ARRLVSAAASAV+GLAV GVLM
Sbjct: 121 ARRLVSAAASAVIGLAVAGVLM 141

[Close]

BLAST of Csor.00g234290 vs. ExPASy TrEMBL
Match: A0A1S3CT22 (extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1)

HSP 1 Score: 174 bits (441), Expect = 1.89e-53
Identity = 106/140 (75.71%), Postives = 115/140 (82.14%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSS--SAAVRRLDDT--PADPTVKCSPCEQNPPSPPPPPVYP 60
           MLP   LLFL  LLLISPSS+  SA VRRLDDT  P DP VKC+PCEQNPPSPPPP VYP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSATVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPLVYP 60

Query: 61  SPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAA 120
           SPPPPSPPPPDVV YYSPPPP KK+ KN +CPPPP+P+FMYITGPPGDLYPIDQ+YNAA 
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKNPNCPPPPSPSFMYITGPPGDLYPIDQNYNAAG 120

Query: 121 RRLVSAAASAVV--GLAVVG 134
           RR  +AAA  VV  GL +VG
Sbjct: 121 RRSAAAAAVGVVLAGLLLVG 140

[Close]

BLAST of Csor.00g234290 vs. ExPASy TrEMBL
Match: A0A6J1DDL2 (acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1)

HSP 1 Score: 173 bits (438), Expect = 6.74e-53
Identity = 106/144 (73.61%), Postives = 117/144 (81.25%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSS---SAAVRRLDDTPA------DPTVKCSPCEQNPPSPPP 60
           MLP  SLLFL LLLLISPS++   SAA R LD+ PA      DPTVKC+PC+QNPPSPPP
Sbjct: 1   MLPLKSLLFLNLLLLISPSATAAASAAARFLDEAPAVPSTTGDPTVKCAPCDQNPPSPPP 60

Query: 61  PPVYPSPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPP-APNFMYITGPPGDLYPIDQ 120
           PP+YPSPPPPSPPPPDV+ YYSPP PPKK   ND+CPPPP  P+F YITGPPGDLYPIDQ
Sbjct: 61  PPIYPSPPPPSPPPPDVLPYYSPP-PPKKPKNNDNCPPPPYPPSFTYITGPPGDLYPIDQ 120

Query: 121 SYNAAARRLVSAAASAVVGLAVVG 134
            YNAAAR L SAAA+AVVGL +VG
Sbjct: 121 DYNAAARTLTSAAAAAVVGLGLVG 143

[Close]

BLAST of Csor.00g234290 vs. ExPASy TrEMBL
Match: A0A0A0KPJ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1)

HSP 1 Score: 169 bits (427), Expect = 2.47e-51
Identity = 101/141 (71.63%), Postives = 114/141 (80.85%), Query Frame = 0


Query: 1   MLPFNSLLFLALLLLISPSSS--SAAVRRLDDT--PADPTVKCSPCEQNPPSPPPPPVYP 60
           MLP   LLFL  LLLISPSS+  S  VRRLDDT  P DP VKC+PCEQNPPSPPPP VYP
Sbjct: 1   MLPLKFLLFLNFLLLISPSSALTSVTVRRLDDTTTPTDPNVKCAPCEQNPPSPPPPVVYP 60

Query: 61  SPPPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAA 120
           SPPPPSPPPPDVV YYSPPPP KK+ K+ +CPPPP+P+FMYITGPPGDLYPIDQ YNAA 
Sbjct: 61  SPPPPSPPPPDVVPYYSPPPPKKKEPKSPNCPPPPSPSFMYITGPPGDLYPIDQGYNAAG 120

Query: 121 RRLVSAAASAVVGLAVVGVLM 137
           RR    +A+ VVG+ + G+L+
Sbjct: 121 RR----SAATVVGVVLAGLLL 137

[Close]

BLAST of Csor.00g234290 vs. TAIR 10
Match: AT1G23040.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 74.7 bits (182), Expect = 6.4e-14
Identity = 67/141 (47.52%), Postives = 91/141 (64.54%), Query Frame = 0


Query: 6   SLLFLALL---LLISPSSSSAA---VRRLDDTPADPTVKCSP-CEQNPPSPPPPPVYPSP 65
           +++ +ALL    LI+ SSSS A    R+LD+   DP +KCSP C QNPP P PPP  PSP
Sbjct: 15  TVMMIALLTCPTLINGSSSSDASLEARKLDE--VDP-IKCSPSCIQNPPPPSPPP--PSP 74

Query: 66  PPPSPPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAA-R 125
           PPP+ PPP  +    PPPPPKK   +  CPPPP  NF+YITGPPG+LYP+D+ + AAA +
Sbjct: 75  PPPACPPPPAL----PPPPPKK--VSSYCPPPPPANFLYITGPPGNLYPVDEQFGAAAGK 134

Query: 126 RLVSAAASAVVGLAVVGVLMM 139
             +    S ++   ++  L++
Sbjct: 135 SFMVVKLSGLIAFGIMAFLIL 144

[Close]

BLAST of Csor.00g234290 vs. TAIR 10
Match: AT1G70990.1 (proline-rich family protein )

HSP 1 Score: 66.2 bits (160), Expect = 2.3e-11
Identity = 61/134 (45.52%), Postives = 82/134 (61.19%), Query Frame = 0


Query: 6   SLLFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQNPPSPPPPPVYPSPPPPS--- 65
           +++FL   ++I+ S SS   R+L++ P    +KC+PC QN P P PPP  PSPPPPS   
Sbjct: 56  TVVFLTFPMIINASDSSTN-RKLEEDP----IKCTPCLQNIPPPSPPP--PSPPPPSQAC 115

Query: 66  PPPPDVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLVSA 125
           PPPP       PP PPKK +    CPPPP+  ++Y+TGPPG+LYPIDQ + AA  +  S 
Sbjct: 116 PPPP------LPPSPPKKSY----CPPPPS-TYIYMTGPPGELYPIDQQFGAAVTK--SF 169

Query: 126 AASAVVGLAVVGVL 137
               + GL   GV+
Sbjct: 176 TVVKISGLIAFGVM 169

[Close]

BLAST of Csor.00g234290 vs. TAIR 10
Match: AT1G02405.1 (proline-rich family protein )

HSP 1 Score: 58.5 bits (140), Expect = 4.8e-09
Identity = 60/135 (44.44%), Postives = 79/135 (58.52%), Query Frame = 0


Query: 8   LFLALLLLISPSSSSAAVRRLDDTPADPTVKCSPCEQN----PPSPPPPPVYPSPPPPSP 67
           + +A+++L SP   +A     +D+ A+  V C PC QN    PPSPPPP   PSPPPPSP
Sbjct: 15  ILMAIVILASPIIINA-----EDSSAEVDVNCIPCLQNQPPPPPSPPPPSCTPSPPPPSP 74

Query: 68  PPP-DVVIYYSPPPPPKKDHKNDDCPPPPAPNFMYITGPPGDLYPIDQSYNAAARRLVSA 127
           PPP       SP PPP         PPPP PN+++ T PPGDLYPI+  Y AA    V+ 
Sbjct: 75  PPPKKSSCPPSPLPPP---------PPPPPPNYVF-TYPPGDLYPIENYYGAA----VAV 130

Query: 128 AASAVVGLAVVGVLM 138
            + +V+ L V GV++
Sbjct: 135 ESFSVMKLFVFGVMV 130

The following BLAST results are available for this feature:

BLAST of Csor.00g234290 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g234290 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6601837.1	3.52e-83	100.00	hypothetical protein SDJN03_07070, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7032543.1	4.11e-82	98.55	hypothetical protein SDJN02_06592, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022953268.1	1.67e-81	97.83	extensin [Cucurbita moschata]	[more]
XP_023520933.1	4.57e-77	94.20	extensin [Cucurbita pepo subsp. pepo] >XP_023521360.1 extensin-like [Cucurbita p...	[more]
XP_022989990.1	1.39e-74	90.85	leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]	[more]

BLAST of Csor.00g234290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GMY1	8.11e-82	97.83	extensin OS=Cucurbita moschata OX=3662 GN=LOC111455867 PE=4 SV=1	[more]
A0A6J1JNW0	6.72e-75	90.85	leucine-rich repeat extensin-like protein 3 OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A1S3CT22	1.89e-53	75.71	extensin-like OS=Cucumis melo OX=3656 GN=LOC103504576 PE=4 SV=1	[more]
A0A6J1DDL2	6.74e-53	73.61	acrosin OS=Momordica charantia OX=3673 GN=LOC111020062 PE=4 SV=1	[more]
A0A0A0KPJ1	2.47e-51	71.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G571580 PE=4 SV=1	[more]

BLAST of Csor.00g234290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G23040.1	6.4e-14	47.52	hydroxyproline-rich glycoprotein family protein	[more]
AT1G70990.1	2.3e-11	45.52	proline-rich family protein	[more]
AT1G02405.1	4.8e-09	44.44	proline-rich family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..94
None	No IPR available	PANTHER	PTHR35094	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 7..137
None	No IPR available	PANTHER	PTHR35094:SF1	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2	coord: 7..137

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g234290.m01	Csor.00g234290.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane