Csor.00g233780 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGCGTTGCAGTTGCAATTTCAATATCGCTTTCGAGTTTCAAAGATTTTGTTTTCAACAATTTGGAATTGGGAAAGAGAATCTCCTCTGCTCCACAATCCATTACGAACGCCGGATTTCTCGCTTTCGCCGGTGCAATCTCGCTGTTTCAGCTCTAATTCCATGGATGACGATTGCGCCTTCTCAAAGTCTGAGCCGAGAAGCAGCTCACCGCACCGGCGTTCTCCTCCGGATCCACGAGAAGCTCGTCGAGTTCCGAAATTCACCAGGAAAGTATCTGCTTCTTACCCTGAGGATAATTGGAACCAACGCGTTAATGAACATTCTGAAGGGTCGGTTTCTCGGCAAAGGAGTGAGTCTTTGTCTCAGAAAGGATTTTAG ATGGGAGCGTTGCAGTTGCAATTTCAATATCGCTTTCGAGTTTCAAAGATTTTGTTTTCAACAATTTGGAATTGGGAAAGAGAATCTCCTCTGCTCCACAATCCATTACGAACGCCGGATTTCTCGCTTTCGCCGGTGCAATCTCGCTGTTTCAGCTCTAATTCCATGGATGACGATTGCGCCTTCTCAAAGTCTGAGCCGAGAAGCAGCTCACCGCACCGGCGTTCTCCTCCGGATCCACGAGAAGCTCGTCGAGTTCCGAAATTCACCAGGAAAGTATCTGCTTCTTACCCTGAGGATAATTGGAACCAACGCGTTAATGAACATTCTGAAGGGTCGGTTTCTCGGCAAAGGAGTGAGTCTTTGTCTCAGAAAGGATTTTAG ATGGGAGCGTTGCAGTTGCAATTTCAATATCGCTTTCGAGTTTCAAAGATTTTGTTTTCAACAATTTGGAATTGGGAAAGAGAATCTCCTCTGCTCCACAATCCATTACGAACGCCGGATTTCTCGCTTTCGCCGGTGCAATCTCGCTGTTTCAGCTCTAATTCCATGGATGACGATTGCGCCTTCTCAAAGTCTGAGCCGAGAAGCAGCTCACCGCACCGGCGTTCTCCTCCGGATCCACGAGAAGCTCGTCGAGTTCCGAAATTCACCAGGAAAGTATCTGCTTCTTACCCTGAGGATAATTGGAACCAACGCGTTAATGAACATTCTGAAGGGTCGGTTTCTCGGCAAAGGAGTGAGTCTTTGTCTCAGAAAGGATTTTAG MGALQLQFQYRFRVSKILFSTIWNWERESPLLHNPLRTPDFSLSPVQSRCFSSNSMDDDCAFSKSEPRSSSPHRRSPPDPREARRVPKFTRKVSASYPEDNWNQRVNEHSEGSVSRQRSESLSQKGF Homology
BLAST of Csor.00g233780 vs. NCBI nr
Match: KAG6589097.1 (hypothetical protein SDJN03_17662, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 250 bits (638), Expect = 1.55e-83 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 0
BLAST of Csor.00g233780 vs. NCBI nr
Match: XP_022969144.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima] >XP_022969146.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita maxima]) HSP 1 Score: 179 bits (455), Expect = 1.25e-52 Identity = 101/136 (74.26%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Csor.00g233780 vs. NCBI nr
Match: KAG7011839.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 178 bits (452), Expect = 3.53e-52 Identity = 101/136 (74.26%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Csor.00g233780 vs. NCBI nr
Match: XP_022952706.1 (pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata] >XP_022952707.1 pentatricopeptide repeat-containing protein At4g38150-like [Cucurbita moschata]) HSP 1 Score: 177 bits (449), Expect = 9.93e-52 Identity = 100/136 (73.53%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Csor.00g233780 vs. NCBI nr
Match: KAG6572199.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 177 bits (449), Expect = 1.43e-51 Identity = 100/136 (73.53%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Csor.00g233780 vs. ExPASy TrEMBL
Match: A0A6J1I1Q2 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita maxima OX=3661 GN=LOC111468227 PE=4 SV=1) HSP 1 Score: 179 bits (455), Expect = 6.07e-53 Identity = 101/136 (74.26%), Postives = 108/136 (79.41%), Query Frame = 0
BLAST of Csor.00g233780 vs. ExPASy TrEMBL
Match: A0A6J1GKZ0 (pentatricopeptide repeat-containing protein At4g38150-like OS=Cucurbita moschata OX=3662 GN=LOC111455321 PE=4 SV=1) HSP 1 Score: 177 bits (449), Expect = 4.81e-52 Identity = 100/136 (73.53%), Postives = 107/136 (78.68%), Query Frame = 0
BLAST of Csor.00g233780 vs. ExPASy TrEMBL
Match: A0A6J1C2J3 (pentatricopeptide repeat-containing protein At4g38150 OS=Momordica charantia OX=3673 GN=LOC111007869 PE=4 SV=1) HSP 1 Score: 157 bits (396), Expect = 3.98e-44 Identity = 90/136 (66.18%), Postives = 102/136 (75.00%), Query Frame = 0
BLAST of Csor.00g233780 vs. ExPASy TrEMBL
Match: A0A1S3CFW0 (pentatricopeptide repeat-containing protein At4g38150 OS=Cucumis melo OX=3656 GN=LOC103500481 PE=4 SV=1) HSP 1 Score: 136 bits (342), Expect = 3.78e-36 Identity = 86/130 (66.15%), Postives = 94/130 (72.31%), Query Frame = 0
BLAST of Csor.00g233780 vs. ExPASy TrEMBL
Match: A0A5D3D5J5 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00030 PE=4 SV=1) HSP 1 Score: 136 bits (342), Expect = 3.78e-36 Identity = 86/130 (66.15%), Postives = 94/130 (72.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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