Csor.00g233750 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCTTTTGATCTCAGCTTCTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTTCTCCCTTTCCTCCACTCTTTCAACCTTTATATCTCTGCAACAGCTCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATTGTTCGAAACTCCGGTCTTATCAGCTGCTCCGGTGACCGACACAGCGGCGGAGATAGCAGGGGAGCTGAAGCTCTAGAGGCTTCCATGGCGGATGGCAGCAGCAAAATTGAGAGCAAAGTTGAAGATAGAGAAGAAAGGGGAAATGGGTTGATTCAAAAAGATGAAGAAAGTGAAAGATCGATCATGGAGGATGACGATAACGACGACGACGAAGAAGAAGTTGGGGCATTGAGCAAAGAGGAATTGAATAAGAAATGTGAAGAATTCATTAGAAAAATGAAGGCTGGTATCAAGCTTGAATCACAGCAATTGCTTGTTTTGTAA ATGAAGCTTTTGATCTCAGCTTCTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTTCTCCCTTTCCTCCACTCTTTCAACCTTTATATCTCTGCAACAGCTCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATTGTTCGAAACTCCGGTCTTATCAGCTGCTCCGGTGACCGACACAGCGGCGGAGATAGCAGGGGAGCTGAAGCTCTAGAGGCTTCCATGGCGGATGGCAGCAGCAAAATTGAGAGCAAAGTTGAAGATAGAGAAGAAAGGGGAAATGGGTTGATTCAAAAAGATGAAGAAAGTGAAAGATCGATCATGGAGGATGACGATAACGACGACGACGAAGAAGAAGTTGGGGCATTGAGCAAAGAGGAATTGAATAAGAAATGTGAAGAATTCATTAGAAAAATGAAGGCTGGTATCAAGCTTGAATCACAGCAATTGCTTGTTTTGTAA ATGAAGCTTTTGATCTCAGCTTCTCTGCTCTCTGCAATGGTGTTTTACTCTTCTCTTCTCCCTTTCCTCCACTCTTTCAACCTTTATATCTCTGCAACAGCTCACAAGAACTACATGTTCTTGCTCTGCAATGGCCTCCTTGTCTTCATTGTTCGAAACTCCGGTCTTATCAGCTGCTCCGGTGACCGACACAGCGGCGGAGATAGCAGGGGAGCTGAAGCTCTAGAGGCTTCCATGGCGGATGGCAGCAGCAAAATTGAGAGCAAAGTTGAAGATAGAGAAGAAAGGGGAAATGGGTTGATTCAAAAAGATGAAGAAAGTGAAAGATCGATCATGGAGGATGACGATAACGACGACGACGAAGAAGAAGTTGGGGCATTGAGCAAAGAGGAATTGAATAAGAAATGTGAAGAATTCATTAGAAAAATGAAGGCTGGTATCAAGCTTGAATCACAGCAATTGCTTGTTTTGTAA MKLLISASLLSAMVFYSSLLPFLHSFNLYISATAHKNYMFLLCNGLLVFIVRNSGLISCSGDRHSGGDSRGAEALEASMADGSSKIESKVEDREERGNGLIQKDEESERSIMEDDDNDDDEEEVGALSKEELNKKCEEFIRKMKAGIKLESQQLLVL Homology
BLAST of Csor.00g233750 vs. NCBI nr
Match: KAG6589100.1 (hypothetical protein SDJN03_17665, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 279 bits (714), Expect = 3.75e-94 Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0
BLAST of Csor.00g233750 vs. NCBI nr
Match: XP_022928452.1 (uncharacterized protein LOC111435260 [Cucurbita moschata]) HSP 1 Score: 273 bits (697), Expect = 1.57e-91 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of Csor.00g233750 vs. NCBI nr
Match: KAG7022808.1 (hypothetical protein SDJN02_16544, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 270 bits (691), Expect = 1.16e-90 Identity = 155/157 (98.73%), Postives = 155/157 (98.73%), Query Frame = 0
BLAST of Csor.00g233750 vs. NCBI nr
Match: XP_023530308.1 (uncharacterized protein LOC111792915 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 269 bits (687), Expect = 4.73e-90 Identity = 153/157 (97.45%), Postives = 156/157 (99.36%), Query Frame = 0
BLAST of Csor.00g233750 vs. NCBI nr
Match: XP_022969273.1 (sodium/potassium/calcium exchanger 1-like [Cucurbita maxima]) HSP 1 Score: 179 bits (453), Expect = 3.06e-54 Identity = 117/169 (69.23%), Postives = 131/169 (77.51%), Query Frame = 0
BLAST of Csor.00g233750 vs. ExPASy TrEMBL
Match: A0A6J1EJY9 (uncharacterized protein LOC111435260 OS=Cucurbita moschata OX=3662 GN=LOC111435260 PE=4 SV=1) HSP 1 Score: 273 bits (697), Expect = 7.59e-92 Identity = 156/159 (98.11%), Postives = 157/159 (98.74%), Query Frame = 0
BLAST of Csor.00g233750 vs. ExPASy TrEMBL
Match: A0A6J1I0H9 (sodium/potassium/calcium exchanger 1-like OS=Cucurbita maxima OX=3661 GN=LOC111468328 PE=4 SV=1) HSP 1 Score: 179 bits (453), Expect = 1.48e-54 Identity = 117/169 (69.23%), Postives = 131/169 (77.51%), Query Frame = 0
BLAST of Csor.00g233750 vs. ExPASy TrEMBL
Match: A0A6J1C4P4 (ATP-dependent RNA helicase MAK5 OS=Momordica charantia OX=3673 GN=LOC111007892 PE=4 SV=1) HSP 1 Score: 167 bits (422), Expect = 3.45e-50 Identity = 104/159 (65.41%), Postives = 119/159 (74.84%), Query Frame = 0
BLAST of Csor.00g233750 vs. ExPASy TrEMBL
Match: A0A0A0K349 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G032240 PE=4 SV=1) HSP 1 Score: 167 bits (423), Expect = 3.77e-50 Identity = 109/165 (66.06%), Postives = 126/165 (76.36%), Query Frame = 0
BLAST of Csor.00g233750 vs. ExPASy TrEMBL
Match: A0A1S3CG16 (gem-associated protein 2-like OS=Cucumis melo OX=3656 GN=LOC103500515 PE=4 SV=1) HSP 1 Score: 138 bits (348), Expect = 9.26e-39 Identity = 96/163 (58.90%), Postives = 112/163 (68.71%), Query Frame = 0
BLAST of Csor.00g233750 vs. TAIR 10
Match: AT2G04515.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04495.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 52.8 bits (125), Expect = 3.0e-07 Identity = 60/179 (33.52%), Postives = 87/179 (48.60%), Query Frame = 0
BLAST of Csor.00g233750 vs. TAIR 10
Match: AT3G13130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte; Has 140 Blast hits to 132 proteins in 41 species: Archae - 2; Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 6.7e-07 Identity = 52/172 (30.23%), Postives = 85/172 (49.42%), Query Frame = 0
BLAST of Csor.00g233750 vs. TAIR 10
Match: AT2G04495.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04515.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 51.2 bits (121), Expect = 8.7e-07 Identity = 63/191 (32.98%), Postives = 90/191 (47.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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