Csor.00g233730 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g233730
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	Csor_Chr11: 13640214 .. 13641892 (+)
RNA-Seq Expression	Csor.00g233730
Synteny	Csor.00g233730

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCACCTCTGCTATCCAGCAATCCGCCTTTGCCGGCCAGACTGCCTTGAAGCAATCCAATGAGCTCGTCCGAAAGGTCGGCGCTTTCGGTGGCAGCCGCTTCACCATGCGGCGGACGGTCAAGAGTGCTCCTCAAAGCATATGGTAAAGCTCCTTCATATATTTACTTTACCAGTTTGTTGGGAGTGTTTGTTTAGCTCTCTTTTTGTTTATCAGGATCAGAGGAAGTTAAACTGTTCTAAAGTTACTGCCCTGATGTGTTTTCTGTATCTTTATGCTAGTATATTTGGTTAGTTTTTACCTGTGATACAAAGTGTCGTGTTTATTTAACTCGTGGGGCTGTCCTCGCAGAGGCTCGTCTCTAACTGAGCGAGCTTGACAAGTCAGACACAGTTGTGACAGATACACTATCCGTCTTTGATCATTTGACCTTGGTATTATTTGATTCAGGTTCTACACATTCGTTTATCTTTGATGGATTTGTTGAGCTAGCCCACTTAGAGTTGGAACCGTTAGAGGCCACCCCATCCGTATCCACCCCTCTGCTCACTAGTTTTTGATGGCTGCTCATAGGATTAAGGGGTAGTGTAATAGTGTCACGAGTTTTGATGGCTACATTCATAGGGTTAAGGGAGGTAGTGTAACAGTGTCAGAACGAGTCATAGAAGTCTGATAGTGTTAAACATGCAAGACTTCGATGTCATCTTGGATATGAACTAGTTAGGCGAGAATCGCGCTCTCATGAATTGTGAGGCTTGGATAGTAACTCTCAGACTACTGGCCGTTTGAGAAGTTTCCTGCAAATTTCAAGCCGTAAATCTCTACTCCCATCCCTATGAAATTGAGAATTTTGTAGAGATAGAGATTGAAATAGGAGGCGGGAACTTCTCCATCTCCGCGTCATGAATTTCTGTAGTTGAATATGATAAGTTCGAGAAAAGATCACTTTACGGTGATTCGAAGAACAAATAAGAAGAAGAATTTGAAGTTCCATTTGAAATGCAAACGCTTTGTTTTCTTAACAGGTATGGTCCAGATCGCCCAAAATACTTGGGACCCTTCTCTGAACAAACACCATCCTACCTCACTGGAGAGTTCCCAGGTGACTACGGCTGGGACACAGCCGGTCTGTCAGCAGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAGGTGATCCACTCCAGATGGGCCATGCTCGGTGCACTAGGCTGTGTCTTCCCAGAAGTCCTTGCAAAGAATGGTGTCAAGTTCGGTGAATCAGTATGGTTCAAGGCCGGTTCACAGATCTTCTCCGAAGGTGGCCTCGATTACCTTGGCAACCCAAACCTCGTCCACGCACAGAGCATCCTGGCCATCTGGGCTTGCCAGGTTGTGCTGATGGGGTTCGTGGAAGGCTACCGGGTTGGGGGCGGTCCTCTTGGTGAAGGGCTGGACCCAATCTACCCAGGAGGGGCGTTCGACCCACTGGGATTGGCGGATGACCCAGATGCCTTTGCTGAGTTGAAAGTGAAGGAGCTGAAGAATGGAAGGCTGGCAATGTTCTCCATGTTTGGATTCTTCGTGCAGGCTATTGTCACTGGAAAGGGTCCTATTGAGAATCTGTTCGACCATGTTGCTGACCCTGTTGCCAACAATGCTTGGGCTTATGCCACCAACTTCGTCCCCGGAAAATGA

mRNA sequence

ATGGCCACCTCTGCTATCCAGCAATCCGCCTTTGCCGGCCAGACTGCCTTGAAGCAATCCAATGAGCTCGTCCGAAAGGTCGGCGCTTTCGGTGGCAGCCGCTTCACCATGCGGCGGACGGTCAAGAGTGCTCCTCAAAGCATATGGTATGGTCCAGATCGCCCAAAATACTTGGGACCCTTCTCTGAACAAACACCATCCTACCTCACTGGAGAGTTCCCAGGTGACTACGGCTGGGACACAGCCGGTCTGTCAGCAGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAGGTGATCCACTCCAGATGGGCCATGCTCGGTGCACTAGGCTGTGTCTTCCCAGAAGTCCTTGCAAAGAATGGTGTCAAGTTCGGTGAATCAGTATGGTTCAAGGCCGGTTCACAGATCTTCTCCGAAGGTGGCCTCGATTACCTTGGCAACCCAAACCTCGTCCACGCACAGAGCATCCTGGCCATCTGGGCTTGCCAGGTTGTGCTGATGGGGTTCGTGGAAGGCTACCGGGTTGGGGGCGGTCCTCTTGGTGAAGGGCTGGACCCAATCTACCCAGGAGGGGCGTTCGACCCACTGGGATTGGCGGATGACCCAGATGCCTTTGCTGAGTTGAAAGTGAAGGAGCTGAAGAATGGAAGGCTGGCAATGTTCTCCATGTTTGGATTCTTCGTGCAGGCTATTGTCACTGGAAAGGGTCCTATTGAGAATCTGTTCGACCATGTTGCTGACCCTGTTGCCAACAATGCTTGGGCTTATGCCACCAACTTCGTCCCCGGAAAATGA

Coding sequence (CDS)

ATGGCCACCTCTGCTATCCAGCAATCCGCCTTTGCCGGCCAGACTGCCTTGAAGCAATCCAATGAGCTCGTCCGAAAGGTCGGCGCTTTCGGTGGCAGCCGCTTCACCATGCGGCGGACGGTCAAGAGTGCTCCTCAAAGCATATGGTATGGTCCAGATCGCCCAAAATACTTGGGACCCTTCTCTGAACAAACACCATCCTACCTCACTGGAGAGTTCCCAGGTGACTACGGCTGGGACACAGCCGGTCTGTCAGCAGACCCCGAGACCTTCGCCAAGAACCGTGAGCTCGAGGTGATCCACTCCAGATGGGCCATGCTCGGTGCACTAGGCTGTGTCTTCCCAGAAGTCCTTGCAAAGAATGGTGTCAAGTTCGGTGAATCAGTATGGTTCAAGGCCGGTTCACAGATCTTCTCCGAAGGTGGCCTCGATTACCTTGGCAACCCAAACCTCGTCCACGCACAGAGCATCCTGGCCATCTGGGCTTGCCAGGTTGTGCTGATGGGGTTCGTGGAAGGCTACCGGGTTGGGGGCGGTCCTCTTGGTGAAGGGCTGGACCCAATCTACCCAGGAGGGGCGTTCGACCCACTGGGATTGGCGGATGACCCAGATGCCTTTGCTGAGTTGAAAGTGAAGGAGCTGAAGAATGGAAGGCTGGCAATGTTCTCCATGTTTGGATTCTTCGTGCAGGCTATTGTCACTGGAAAGGGTCCTATTGAGAATCTGTTCGACCATGTTGCTGACCCTGTTGCCAACAATGCTTGGGCTTATGCCACCAACTTCGTCCCCGGAAAATGA

Protein sequence

MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK

Homology

[Close]

BLAST of Csor.00g233730 vs. ExPASy Swiss-Prot
Match: P27518 (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum OX=3635 GN=CAB-151 PE=2 SV=2)

HSP 1 Score: 525.4 bits (1352), Expect = 3.7e-148
Identity = 249/265 (93.96%), Postives = 258/265 (97.36%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQTALKQSNELV K+GA GG R +MRRTVKSAP SIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVCKIGAVGGGRVSMRRTVKSAPTSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FS+Q PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPE+L+K
Sbjct: 61  FSDQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. ExPASy Swiss-Prot
Match: P12062 (Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. OX=4104 GN=CAB37 PE=3 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 1.0e-145
Identity = 245/265 (92.45%), Postives = 256/265 (96.60%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQTALK  NELVRK+G+FGG R TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKSQNELVRKIGSFGGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGV FGE+VWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGFVEGYRVGGGP
Sbjct: 121 NGVTFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAAQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLD IYPGGAFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NL+DHVADPVANNAWA+ATNFVPGK
Sbjct: 241 NLYDHVADPVANNAWAFATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. ExPASy Swiss-Prot
Match: P27494 (Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum OX=4097 GN=CAB36 PE=3 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 3.9e-145
Identity = 243/265 (91.70%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAI+QSAFAGQTALK  NELVRK+G+F G R TMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIEQSAFAGQTALKSQNELVRKIGSFNGGRATMRRTVKSAPQSIWYGEDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPE+L+K
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNL+HAQSILA+WA QVVLMG +EGYRVGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAVWASQVVLMGLIEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLD IYPGGAFDPLGLADDP+AFAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDKIYPGGAFDPLGLADDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. ExPASy Swiss-Prot
Match: Q9SHR7 (Chlorophyll a-b binding protein 2.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.1 PE=1 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 9.5e-144
Identity = 239/264 (90.53%), Postives = 254/264 (96.21%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQTALK SNEL+RKVG  GG R TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPG 265
           NLFDH+ADPVANNAW+YATNFVPG
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Csor.00g233730 vs. ExPASy Swiss-Prot
Match: Q9S7J7 (Chlorophyll a-b binding protein 2.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB2.2 PE=1 SV=1)

HSP 1 Score: 510.0 bits (1312), Expect = 1.6e-143
Identity = 237/265 (89.43%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQTALK S++L++KVG  GG R TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAW+YATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. NCBI nr
Match: XP_022928240.1 (chlorophyll a-b binding protein 151, chloroplastic [Cucurbita moschata] >XP_023529768.1 chlorophyll a-b binding protein 151, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6589102.1 Chlorophyll a-b binding protein 151, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548 bits (1411), Expect = 7.75e-197
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. NCBI nr
Match: XP_022953074.1 (chlorophyll a-b binding protein 151, chloroplastic-like [Cucurbita moschata] >XP_023554552.1 chlorophyll a-b binding protein 151, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG6572233.1 Chlorophyll a-b binding protein 151, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 543 bits (1400), Expect = 3.68e-195
Identity = 261/265 (98.49%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGADRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. NCBI nr
Match: XP_004144543.1 (chlorophyll a-b binding protein 151, chloroplastic [Cucumis sativus] >KGN43422.1 hypothetical protein Csa_020546 [Cucumis sativus])

HSP 1 Score: 543 bits (1398), Expect = 7.44e-195
Identity = 261/265 (98.49%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQTALKQSNELVRKVGA GG+RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. NCBI nr
Match: XP_022989453.1 (chlorophyll a-b binding protein 151, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 542 bits (1397), Expect = 1.06e-194
Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVP K
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPRK 265

[Close]

BLAST of Csor.00g233730 vs. NCBI nr
Match: XP_008462084.1 (PREDICTED: chlorophyll a-b binding protein 151, chloroplastic [Cucumis melo] >KAA0059192.1 chlorophyll a-b binding protein 151 [Cucumis melo var. makuwa] >TYK19327.1 chlorophyll a-b binding protein 151 [Cucumis melo var. makuwa])

HSP 1 Score: 541 bits (1395), Expect = 2.13e-194
Identity = 261/265 (98.49%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVRKVGA GGSRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. ExPASy TrEMBL
Match: A0A6J1ER60 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111435134 PE=3 SV=1)

HSP 1 Score: 548 bits (1411), Expect = 3.75e-197
Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. ExPASy TrEMBL
Match: A0A6J1GNL8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111455588 PE=3 SV=1)

HSP 1 Score: 543 bits (1400), Expect = 1.78e-195
Identity = 261/265 (98.49%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYG DRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGADRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEILAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+E
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPVE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. ExPASy TrEMBL
Match: A0A0A0K565 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_7G033300 PE=3 SV=1)

HSP 1 Score: 543 bits (1398), Expect = 3.60e-195
Identity = 261/265 (98.49%), Postives = 264/265 (99.62%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQTALKQSNELVRKVGA GG+RFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQTALKQSNELVRKVGALGGARFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. ExPASy TrEMBL
Match: A0A6J1JQB2 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486503 PE=3 SV=1)

HSP 1 Score: 542 bits (1397), Expect = 5.11e-195
Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQPALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVP K
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPRK 265

[Close]

BLAST of Csor.00g233730 vs. ExPASy TrEMBL
Match: A0A5D3D6Y9 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold295G00480 PE=3 SV=1)

HSP 1 Score: 541 bits (1395), Expect = 1.03e-194
Identity = 261/265 (98.49%), Postives = 263/265 (99.25%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQSAFAGQ ALKQSNELVRKVGA GGSRFTMRRTVKSAPQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSAFAGQAALKQSNELVRKVGAVGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPE+LAK
Sbjct: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLAK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGESVWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGFVEGYRVGGGP
Sbjct: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 265
           NLFDHVADPVANNAWAYATNFVPGK
Sbjct: 241 NLFDHVADPVANNAWAYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. TAIR 10
Match: AT2G05100.1 (photosystem II light harvesting complex gene 2.1 )

HSP 1 Score: 510.8 bits (1314), Expect = 6.8e-145
Identity = 239/264 (90.53%), Postives = 254/264 (96.21%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQTALK SNEL+RKVG  GG R TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPG 265
           NLFDH+ADPVANNAW+YATNFVPG
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPG 264

[Close]

BLAST of Csor.00g233730 vs. TAIR 10
Match: AT2G05070.1 (photosystem II light harvesting complex gene 2.2 )

HSP 1 Score: 510.0 bits (1312), Expect = 1.2e-144
Identity = 237/265 (89.43%), Postives = 255/265 (96.23%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTVKSAPQSIWYGPDRPKYLGP 60
           MATSAIQQS+FAGQTALK S++L++KVG  GG R TMRRTVKS PQSIWYGPDRPKYLGP
Sbjct: 1   MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60

Query: 61  FSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLAK 120
           FSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+K
Sbjct: 61  FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120

Query: 121 NGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGGP 180
           NGVKFGE+VWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWA QVVLMGF+EGYR+GGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180

Query: 181 LGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
           LGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240

Query: 241 NLFDHVADPVANNAWAYATNFVPGK 266
           NLFDH+ADPVANNAW+YATNFVPGK
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. TAIR 10
Match: AT3G27690.1 (photosystem II light harvesting complex gene 2.3 )

HSP 1 Score: 508.8 bits (1309), Expect = 2.6e-144
Identity = 238/266 (89.47%), Postives = 254/266 (95.49%), Query Frame = 0


Query: 1   MATSAIQQSAFAGQTALKQSNELVRKVGAF-GGSRFTMRRTVKSAPQSIWYGPDRPKYLG 60
           MATSAIQ S+FAGQT LK SN+L+RK+GA  GG R  MRRTVKS PQSIWYGPDRPKYLG
Sbjct: 1   MATSAIQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLG 60

Query: 61  PFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVLA 120
           PFSE TPSYLTGE+PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGC FPE+L+
Sbjct: 61  PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 120

Query: 121 KNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGGG 180
           KNGVKFGE+VWFKAGSQIFSEGGLDYLGNPNL+HAQSILAIWACQVVLMGF+EGYR+GGG
Sbjct: 121 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGG 180

Query: 181 PLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240
           PLGEGLDP+YPGGAFDPL LA+DP+AF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI
Sbjct: 181 PLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240

Query: 241 ENLFDHVADPVANNAWAYATNFVPGK 266
           ENLFDH+ADPVANNAWAYATNFVPGK
Sbjct: 241 ENLFDHIADPVANNAWAYATNFVPGK 266

[Close]

BLAST of Csor.00g233730 vs. TAIR 10
Match: AT2G34420.1 (photosystem II light harvesting complex gene B1B2 )

HSP 1 Score: 418.7 bits (1075), Expect = 3.5e-117
Identity = 205/268 (76.49%), Postives = 228/268 (85.07%), Query Frame = 0


Query: 2   ATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTV---KSAPQSIWYGPDRPKYL 61
           +T A+   AFAG+     +++++      G  R TMR+TV   K    S WYG DR KYL
Sbjct: 4   STMALSSPAFAGKAVKPAASDVL------GSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 63

Query: 62  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVL 121
           GPFS + PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L
Sbjct: 64  GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 123

Query: 122 AKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRVGG 181
           A+NGVKFGE+VWFKAGSQIFS+GGLDYLGNP+LVHAQSILAIWA QV+LMG VEGYRV G
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 183

Query: 182 -GPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
            GPLGE  D +YPGG+FDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PIENLFDHVADPVANNAWAYATNFVPGK 266
           P+ENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 244 PLENLADHLADPVNNNAWAFATNFVPGK 265

[Close]

BLAST of Csor.00g233730 vs. TAIR 10
Match: AT1G29930.1 (chlorophyll A/B binding protein 1 )

HSP 1 Score: 417.9 bits (1073), Expect = 6.0e-117
Identity = 209/268 (77.99%), Postives = 228/268 (85.07%), Query Frame = 0


Query: 2   ATSAIQQSAFAGQTALKQSNELVRKVGAFGGSRFTMRRTV---KSAPQSIWYGPDRPKYL 61
           +T A+   AFAG+ A+K S          G  R TMR+TV   K    S WYG DR KYL
Sbjct: 4   STMALSSPAFAGK-AVKLSPAASE---VLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 63

Query: 62  GPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEVL 121
           GPFS ++PSYLTGEFPGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGCVFPE+L
Sbjct: 64  GPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 123

Query: 122 AKNGVKFGESVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAIWACQVVLMGFVEGYRV-G 181
           A+NGVKFGE+VWFKAGSQIFS+GGLDYLGNP+LVHAQSILAIWA QV+LMG VEGYRV G
Sbjct: 124 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 183

Query: 182 GGPLGEGLDPIYPGGAFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 241
            GPLGE  D +YPGG+FDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 184 NGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 243

Query: 242 PIENLFDHVADPVANNAWAYATNFVPGK 266
           PIENL DH+ADPV NNAWA+ATNFVPGK
Sbjct: 244 PIENLADHLADPVNNNAWAFATNFVPGK 267

The following BLAST results are available for this feature:

BLAST of Csor.00g233730 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27518	3.7e-148	93.96	Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum OX=3635...	[more]
P12062	1.0e-145	92.45	Chlorophyll a-b binding protein 37, chloroplastic OS=Petunia sp. OX=4104 GN=CAB3...	[more]
P27494	3.9e-145	91.70	Chlorophyll a-b binding protein 36, chloroplastic OS=Nicotiana tabacum OX=4097 G...	[more]
Q9SHR7	9.5e-144	90.53	Chlorophyll a-b binding protein 2.1, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
Q9S7J7	1.6e-143	89.43	Chlorophyll a-b binding protein 2.2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]

BLAST of Csor.00g233730 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928240.1	7.75e-197	100.00	chlorophyll a-b binding protein 151, chloroplastic [Cucurbita moschata] >XP_0235...	[more]
XP_022953074.1	3.68e-195	98.49	chlorophyll a-b binding protein 151, chloroplastic-like [Cucurbita moschata] >XP...	[more]
XP_004144543.1	7.44e-195	98.49	chlorophyll a-b binding protein 151, chloroplastic [Cucumis sativus] >KGN43422.1...	[more]
XP_022989453.1	1.06e-194	99.25	chlorophyll a-b binding protein 151, chloroplastic-like [Cucurbita maxima]	[more]
XP_008462084.1	2.13e-194	98.49	PREDICTED: chlorophyll a-b binding protein 151, chloroplastic [Cucumis melo] >KA...	[more]

BLAST of Csor.00g233730 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ER60	3.75e-197	100.00	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1GNL8	1.78e-195	98.49	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A0A0K565	3.60e-195	98.49	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1JQB2	5.11e-195	99.25	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3D6Y9	1.03e-194	98.49	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of Csor.00g233730 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G05100.1	6.8e-145	90.53	photosystem II light harvesting complex gene 2.1	[more]
AT2G05070.1	1.2e-144	89.43	photosystem II light harvesting complex gene 2.2	[more]
AT3G27690.1	2.6e-144	89.47	photosystem II light harvesting complex gene 2.3	[more]
AT2G34420.1	3.5e-117	76.49	photosystem II light harvesting complex gene B1B2	[more]
AT1G29930.1	6.0e-117	77.99	chlorophyll A/B binding protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 66..231 e-value: 9.1E-50 score: 169.3
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 56..258 e-value: 7.5E-90 score: 302.2
None	No IPR available	PANTHER	PTHR21649:SF33	CHLOROPHYLL A-B BINDING PROTEIN 2.1, CHLOROPLASTIC-RELATED	coord: 1..265
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 48..262
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 1..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g233730.m01	Csor.00g233730.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding
molecular_function	GO:0046872	metal ion binding