Csor.00g233710 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGGCACAGTAGTGAAACCACCATGATTGGTACCTCCATAGCTCTCTTACAGGAAAGGTTCAGGCAGTTGCAGAAAGACAAACAAAGGAGAGAGAAGAAGGAGCTTCTTAGCCTGTTGTCTGATTCGAATAGAGTCAATACCTCCTCGATAATGCATTTAGAATCCAATAGGTCGTCGAACTCGAGAGATTTGAACCCTGATTCCCTCTCCCTTGGCTTGAACTCGTCGAGTGCAGGTAAGCAAGTCGATATCCATGAAGCTAGGTTGATGCCTGGAAATTCAGTCATGGGTAGTGGCTTAAGAAGTTGTTTAGATAATCAAGATGTGGATACCACTCTTCATCTATGAACAGTTTGTTCACTTAGTGTTTGTGTTGGTTTATTTGTTGCTTCTCTTCCCACTGATATAGCTTGTGTGATCAATATGTGTATTGATAATGGTCTGGACATTCTGTGAGTTGTTCTTTTCTTGGTTAATTCTTAGGAATGTGTACCTAATGAGAAATGGAGAGAAGGGAAGTAATGGAAAGTTTGGTCATTTTAAATCCTTTCTTTTCTTTTGGGTCATGAGATTCGAATATCTGAGAGTTTTGTGTCGGTGTGTCGCGACTAGAAGCTTTCCATCTTTGGATATATGAACGAGAAATTGTGAAAGTGTCCCGAATTTTATTTTGTGATTAGTTGTCGAGGCAACTAAATTTTGTTTTTTCGGGAAGAAGGGCAAGAGATGCATTTTCATAATGTTTGGAAATATTCAATGTATTTAGGTATTCATTGGACTTTGGTGGGACTTTGGTGATCTAGCCGTGTGAAGCGAAATCTTAATTCTTAACGTTCGAGAAATGATTCTTATTATTCTTTAAAATCATGTTTTTCTATTAGTGATGCACGTCGGAGTTTGATTGTATAAGATAATGTTGCGGTGTGTTTATATTGTTAATTTTAACGTGACTTTCGATGTTTGAGAAATAATAAAGCAATCATCAATCAAATAACATTTTAGCTATCAAATTCACTCCTATGTTTCAATTTGATTTTTTTTAAATATATATTTGAAAATTTTCAAATTTATCCTTATGTTTAATAAACAAAAACTTCAAAAAAAAAAAAAAAAAAAAAATCTTCAAAATTGTAATATTATCGTTGACCTAACATAAATGTTTTAAATCTGTCATTGAAGTGAAAATCTATTTGAATGTTGGACGAAAAATTGACAAAATAGTGATTTGTCATGACACACGGTAACTTTATGTCAAACATTTTAACGAATTTTCTACTTAAAACAGTAAATTTGAAATATTTATCAAAGGTTAAGGTAGATGAGTATATATAGTTTAGCTTTTTGTTAACTAAGTTCATTCTTACATTATGTTAAGACTTAGCTCGCACACTTGCATTATTGCATCGAATAACTTTATGCAATACTGGTGTAGACAAATTCATTGTATACAAGTCTAGCTAATTAGCGTTTTTTTAGCTCGTTGAACTACTATGTTAGTTGTAGCTCTGAAGTTTAATGCTATATGAACGATTGGTAAGGGAAACTTGAGAGTTTAATACATAGTATCACAAATGAACTTCAAATTCGAGTATTGATGAAAGTGGGGATGGGCTATCTATAATTTTTTATCCCTTTAATTTCACTACAAATTTAAGCATATGAATAGCTGAATTCAACTAAATTGGAGCTAGAAATAGCTGAATGCAATCAAATTATCCTCTTCCAATTTCCTTTATTTTAGTTTTGTACAGATATGCGAATTTATGTTGGAAGTTGAAGCAAAGATCTGAAGTTTCAGAAGAAAATCTTAAATAAATCCAACTTTACCAATTTGAGGGCCTCTCCTCTTATAAACAAATAGCTCAAATTTAGACGCATCGTTGAACCCGGCGCTGACCGTATTCGGCCCATTTCTACACGCAAAGACCACGTCTCTCTCTATCTTCTCTATAGGGGTTCGCTAGTTGAACCTCTGTTCGCCTCCTCCTCTTCGTCTTTCGTTTTCAGGGCTTTGAAATCTGCAAATTACCCTACTGATTATGAAACCCAATTCGACCCTTTTCTGATTTCTGGCCTTTCTCACTGCTTTGATCAGCTAAGAATCTCGAATCCGTGGTATAATTGGTGGGTTAGCTCTCTCTTTTCTTTTCTTAGCTTTCTCGTTCTGTATTTGAGTTGGGAAGTTGATGAACTCGCTTGAACTAATGGCGTTTTCTTCTTGATCTTTGGAGTTTCATTTGCTTGTGTTTCTTAGGTATGAACTTGTTGTACGGGCTTGGTTATTCTTGCTAAAACGTTTCTAGTTGTGTTTGGATGCTAGGAGATCTGGGTTTTTTTTGTTCAATTGTTATCAAGTTGTTCTTGATCTAGCTTTAAACTTGCTTTGTTGCTTGTGATTCTATTTCTTTTCGAGCCTGTGGATATGATCTTTAGTCGTTTTGGAATCATGAACTGTTTCGTTTCTCTCCTTGAGTACATTGCGGAGAGGGCTTCCCTTTGTAGTTAGCTCTGTCTCTGCCTTAACCTGAAATTTAAGTGCCTTTTCCGTATGATTCATATGAAATAAATGATCTTATTCCCCATAGTTCTGCGCCTGTGAGCCTCGCCGTGATCATTTAGCGTTTAGATGGTTCTTATCGTTCCAAACCGTACATAATCATTAGTGTCTTATCCATGGTAATCTTGGAAGGGATTGGTAAAATGGCAATTAGGAGTTCTTCTTAGAAGTTGCCTACTCGTAAAATGTTTAATGTATGTACATACTTGTTGAGCAAAGGTTGACGATGGTTATTTATGTTTATGATCGTTTTTTTTACGCAGTAAGATTAATGGGTGCATCGTCTGGTTCTAA ATGGGTAGGCACAGTAGTGAAACCACCATGATTGGTACCTCCATAGCTCTCTTACAGGAAAGGTTCAGGCAGTTGCAGAAAGACAAACAAAGGAGAGAGAAGAAGGAGCTTCTTAGCCTGTTGTCTGATTCGAATAGAGTCAATACCTCCTCGATAATGCATTTAGAATCCAATAGGTCGTCGAACTCGAGAGATTTGAACCCTGATTCCCTCTCCCTTGGCTTGAACTCGTCGAGTGCAGGTAAGCAAGTCGATATCCATGAAGCTAGGGCTTTGAAATCTGCAAATTACCCTACTGATTATGAAACCCAATTCGACCCTTTTCTGATTTCTGGCCTTTCTCACTGCTTTGATCAGCTAAGAATCTCGAATCCGTGGTATAATTGTAAGATTAATGGGTGCATCGTCTGGTTCTAA ATGGGTAGGCACAGTAGTGAAACCACCATGATTGGTACCTCCATAGCTCTCTTACAGGAAAGGTTCAGGCAGTTGCAGAAAGACAAACAAAGGAGAGAGAAGAAGGAGCTTCTTAGCCTGTTGTCTGATTCGAATAGAGTCAATACCTCCTCGATAATGCATTTAGAATCCAATAGGTCGTCGAACTCGAGAGATTTGAACCCTGATTCCCTCTCCCTTGGCTTGAACTCGTCGAGTGCAGGTAAGCAAGTCGATATCCATGAAGCTAGGGCTTTGAAATCTGCAAATTACCCTACTGATTATGAAACCCAATTCGACCCTTTTCTGATTTCTGGCCTTTCTCACTGCTTTGATCAGCTAAGAATCTCGAATCCGTGGTATAATTGTAAGATTAATGGGTGCATCGTCTGGTTCTAA MGRHSSETTMIGTSIALLQERFRQLQKDKQRREKKELLSLLSDSNRVNTSSIMHLESNRSSNSRDLNPDSLSLGLNSSSAGKQVDIHEARALKSANYPTDYETQFDPFLISGLSHCFDQLRISNPWYNCKINGCIVWF Homology
BLAST of Csor.00g233710 vs. NCBI nr
Match: KAG6589104.1 (hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270 bits (690), Expect = 4.13e-91 Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0
BLAST of Csor.00g233710 vs. NCBI nr
Match: KAE8646145.1 (hypothetical protein Csa_016195, partial [Cucumis sativus]) HSP 1 Score: 114 bits (286), Expect = 5.15e-30 Identity = 70/95 (73.68%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Csor.00g233710 vs. NCBI nr
Match: KAA0048752.1 (hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa] >TYK31583.1 hypothetical protein E5676_scaffold172G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 100 bits (249), Expect = 3.58e-24 Identity = 72/121 (59.50%), Postives = 88/121 (72.73%), Query Frame = 0
BLAST of Csor.00g233710 vs. NCBI nr
Match: KAG6572236.1 (hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 92.0 bits (227), Expect = 4.84e-21 Identity = 56/92 (60.87%), Postives = 66/92 (71.74%), Query Frame = 0
BLAST of Csor.00g233710 vs. NCBI nr
Match: THF98596.1 (hypothetical protein TEA_013184 [Camellia sinensis var. sinensis]) HSP 1 Score: 70.9 bits (172), Expect = 1.57e-12 Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of Csor.00g233710 vs. ExPASy TrEMBL
Match: A0A0A0K617 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G272125 PE=4 SV=1) HSP 1 Score: 114 bits (286), Expect = 4.22e-30 Identity = 70/95 (73.68%), Postives = 83/95 (87.37%), Query Frame = 0
BLAST of Csor.00g233710 vs. ExPASy TrEMBL
Match: A0A5D3E685 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00780 PE=4 SV=1) HSP 1 Score: 100 bits (249), Expect = 1.73e-24 Identity = 72/121 (59.50%), Postives = 88/121 (72.73%), Query Frame = 0
BLAST of Csor.00g233710 vs. ExPASy TrEMBL
Match: A0A4V3WJX2 (Uncharacterized protein OS=Camellia sinensis var. sinensis OX=542762 GN=TEA_013184 PE=4 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 7.62e-13 Identity = 51/112 (45.54%), Postives = 68/112 (60.71%), Query Frame = 0
BLAST of Csor.00g233710 vs. ExPASy TrEMBL
Match: A0A392N8A5 (Uncharacterized protein OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 1.71e-10 Identity = 45/94 (47.87%), Postives = 62/94 (65.96%), Query Frame = 0
BLAST of Csor.00g233710 vs. ExPASy TrEMBL
Match: A0A2P6S1J5 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0156651 PE=4 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 4.46e-10 Identity = 50/95 (52.63%), Postives = 59/95 (62.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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