Csor.00g232570 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGATAGCAGGGCTATTCGCCGCGGCCGCCGCCTCCGCCTCCACCATCGTCCTGTCAGCTCCGCCGTCCTCCGCCGGCCTCCACAAAACCACCTTCTCCCATCAGGTAAGAAGACACTAACTTCTCATTTCTCGGATACCCTTTTATAATCTAACATCTTCGAAAAGAAAATTCTTGGCAATAACCGATGTGGGACGAAATTCAGGAAAAGGTCAACAGAGACGAGGAAATTAGTCCGTCGAGAAGATCCCCGCCGTCCACGGCGCCCGATCACTTTGCTCCGAGATTCGATGGGTTGCGATTCATTGAAACTCTAGTCACTGCTCATAGATAA ATGAAGATAGCAGGGCTATTCGCCGCGGCCGCCGCCTCCGCCTCCACCATCGTCCTGTCAGCTCCGCCGTCCTCCGCCGGCCTCCACAAAACCACCTTCTCCCATCAGGAAAAGGTCAACAGAGACGAGGAAATTAGTCCGTCGAGAAGATCCCCGCCGTCCACGGCGCCCGATCACTTTGCTCCGAGATTCGATGGGTTGCGATTCATTGAAACTCTAGTCACTGCTCATAGATAA ATGAAGATAGCAGGGCTATTCGCCGCGGCCGCCGCCTCCGCCTCCACCATCGTCCTGTCAGCTCCGCCGTCCTCCGCCGGCCTCCACAAAACCACCTTCTCCCATCAGGAAAAGGTCAACAGAGACGAGGAAATTAGTCCGTCGAGAAGATCCCCGCCGTCCACGGCGCCCGATCACTTTGCTCCGAGATTCGATGGGTTGCGATTCATTGAAACTCTAGTCACTGCTCATAGATAA MKIAGLFAAAAASASTIVLSAPPSSAGLHKTTFSHQEKVNRDEEISPSRRSPPSTAPDHFAPRFDGLRFIETLVTAHR Homology
BLAST of Csor.00g232570 vs. NCBI nr
Match: KAG6589218.1 (hypothetical protein SDJN03_17783, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150 bits (380), Expect = 1.00e-45 Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0
BLAST of Csor.00g232570 vs. NCBI nr
Match: KAG7022918.1 (hypothetical protein SDJN02_16654, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 145 bits (365), Expect = 2.01e-43 Identity = 77/79 (97.47%), Postives = 78/79 (98.73%), Query Frame = 0
BLAST of Csor.00g232570 vs. NCBI nr
Match: XP_022952670.1 (uncharacterized protein LOC111455296 [Cucurbita moschata] >KAG6572361.1 hypothetical protein SDJN03_29089, partial [Cucurbita argyrosperma subsp. sororia] >KAG7011972.1 hypothetical protein SDJN02_26880 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 114 bits (285), Expect = 3.41e-31 Identity = 63/79 (79.75%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Csor.00g232570 vs. NCBI nr
Match: XP_038888462.1 (uncharacterized protein LOC120078298 [Benincasa hispida]) HSP 1 Score: 114 bits (284), Expect = 4.58e-31 Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of Csor.00g232570 vs. NCBI nr
Match: XP_023554654.1 (uncharacterized protein LOC111811842 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 109 bits (273), Expect = 2.31e-29 Identity = 61/79 (77.22%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Csor.00g232570 vs. ExPASy TrEMBL
Match: A0A6J1GMF4 (uncharacterized protein LOC111455296 OS=Cucurbita moschata OX=3662 GN=LOC111455296 PE=4 SV=1) HSP 1 Score: 114 bits (285), Expect = 1.65e-31 Identity = 63/79 (79.75%), Postives = 67/79 (84.81%), Query Frame = 0
BLAST of Csor.00g232570 vs. ExPASy TrEMBL
Match: A0A6J1I0M0 (uncharacterized protein LOC111468357 OS=Cucurbita maxima OX=3661 GN=LOC111468357 PE=4 SV=1) HSP 1 Score: 109 bits (272), Expect = 1.59e-29 Identity = 62/79 (78.48%), Postives = 65/79 (82.28%), Query Frame = 0
BLAST of Csor.00g232570 vs. ExPASy TrEMBL
Match: A0A0A0K2C1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G047970 PE=4 SV=1) HSP 1 Score: 107 bits (268), Expect = 6.11e-29 Identity = 59/79 (74.68%), Postives = 64/79 (81.01%), Query Frame = 0
BLAST of Csor.00g232570 vs. ExPASy TrEMBL
Match: A0A5D3C7A0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003450 PE=4 SV=1) HSP 1 Score: 104 bits (259), Expect = 1.48e-27 Identity = 60/80 (75.00%), Postives = 64/80 (80.00%), Query Frame = 0
BLAST of Csor.00g232570 vs. ExPASy TrEMBL
Match: E0CTD2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 3.35e-12 Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of Csor.00g232570 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.6 bits (109), Expect = 1.1e-05 Identity = 36/84 (42.86%), Postives = 47/84 (55.95%), Query Frame = 0
BLAST of Csor.00g232570 vs. TAIR 10
Match: AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.3 bits (103), Expect = 5.3e-05 Identity = 20/28 (71.43%), Postives = 22/28 (78.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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