Csor.00g232380 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g232380
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	multiprotein bridging factor 1B
Location	Csor_Chr11: 14379189 .. 14382654 (+)
RNA-Seq Expression	Csor.00g232380
Synteny	Csor.00g232380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGAATTGGACCCATTTCACAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTAAACGCCGCCCGCCGCGCCGGTGCCGAGATCGAAACCTTAAAGAAATGTTTGCTCCTATTTCCATTTCTCTTTTCTGTTTTATTTCTATTATTCATCATCAATCCTGCAACATTTTTTTCTTTCGTGTTTGTAGAATGATTGTTGATCTTAAATTTGAGATAGTTTTTTTTTTTTTTTCTTTTACTGAAATGGTGCTCGATTGTGGAAATTTGTTTATCGCTCTTTGATGTTCGCTCGAACTGATAGATGATGAACTAGTTCCATTGTGATTTGTTTGTTGAAATTTGACGTTATCATCGTTTTTTGAATACTGATTGTATTATGACTTGGGATACATGTGTTGAATGATCACTTGTAGATACATGTATAGAAACGTGTATAAGTACATGTATGAGTGTATAAGTACATGTATGAACGCATACATGTAGGTTCATTGGTTCATAATTAAATAGGTGCATGACTTTTGGATAATGACCAGTAATGGGGAATGTCCCGATTTACCTATATATATATATGTATGTTGGCATTGGTAGAAGAAGTAGAAAATCAATCGAGAATTCTTTCATAGTTTTACAAAGTTCTCTTCTCTCAAAGAATTCTACCAAATTTCTCTGTTGTCACCGATACAAGTCATGTGTTCTAGAACTTCTTGTTGAAGGTAATATTATAAACATTCTAGAATAAATTAATTTCGCATATGTTTCAACAAGAACAGAAAGAAGAAAGAAAATCAGTTCACTTCAGATGAATTTCTTAGCCACTTATTCCCTTTTCTCCTTTAATTTTTAAATGAAACCACTAATTAAAGCCATTTTTTCCGTATTGTGATTTGTTTTTTCTTTCTTTCTTCAGCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGAACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCGTGAGTACATTACATCTTAATGCCTTTTACAGATAAATGTAGGCGGCACGTTCCAATATTACAATATCCCTAGTTTTTTTATCTCTTTTGTGCTATTCGGGAATAGTAACCAATTCCCTAAATCTATGGAGTTCACCCAAAAATTGATTTATCTTATTATTAATCAAGAATTTTATATAGAGCTAGAACGACCCTCAGATGTATAGAGCTAGAACGACCCTCAGATGTATAGAGCTAGAACGACCCTCAGACGTAGAGCTAGAACTACCCTCAGACGTATAGAGCTAGAACGACCCTCAGACGTATAGAGCTAGAACTACCCTCAGACGTATAGAGCTAGAACGACCCTCAGACGTATAGAGCTAGAACGACCCTCAGACGTATAGAGCTAGAACGACCCTCAGACGTATAGAGCTAGAACGACCCTCAGACGTATAGAGCTAGAACGACCCTCAGACGTATAGAGCTAGAACGACCCTCAGACGTATAGAGCTAGAACGACCCTCAGAAACTGCAAATACTAATTTATTAAGAATTAATTGGATTGAAGCTATACCATCATCATTCGCAGGAATCGAAATATCTGCGAGATCTGGGTTACAATTTGTATCAATTAAACAAATAGTTGGAATTCCCAATGTGATACATTATTGAAGAGCCCGATATTCTTAATGGAAGACGATGAATCAACCTTAAATTTTGTGGTCTATTTTCTTAACTGACAATATTAATTTCTTGCTAGTGTTGAGATTTATTTTGTTCTCACTATTTTTATTGCGTTCATTATGTATGTATGTATGTATGTATGTATGTTGACTTCAGAAGAGTATTTACTATGTGCTTAGAGAGCATTTCAAACTGTTATGGATACTTTTAGGATAGTAGTTAGGAATTTCATGTTATGTTTCACTTTTTTAGTTTTCTGATGTGAATATCTGCAAATTATGTAATATTGAAATTTGGTAAGTATCTTTCATTGATTAGAATGTAATATACTTCGATCCTCTGGGACTTGTTTAGCATTGGATGTTGCATAGGCCAAACCAAAAATGAAAATGAAACTTTTTGTAAAAGGGAAAATCTTTTTGGAATTTATGGTCAAAGTCCTTGTATCCCTTTTAACACTGTCATGAGAAGAAAGTGTTTGCTAGCGGATATTGTCTTCTTTGGACTTTTCCTTTTGGACTTCCTCTCAAGGTTTTTAAAATACGTCTTCTAGGGACAAGTTTCCACACTCTTATAAAGAATGCTTTGTTCCCTTCTCCAACCGACACGAGATCTCACAATCCACCCCCCTTTGAGCCCCAGCGTTCTTGCTGGCACACTACCCGATGTCTGGCTCTAATACCATTTGTAACAGTTCAAGCCCACAGCTAGATATTGTCCTTTTTGGACTTTTCCTTTCGAGCTTACCCTCAAGGTTATTAAAATGCGTTTGTTAGGAAGAGGTTTCCACACCCTTATAAAGAATGCTTCGGACCCCTCTCCAATCGATGCGGAATCTCATAGTTAGCCCTAGTGTTGGTAGAAGATCAATCTACCTTCCAAACAATCTCTTGTTCCTTAAGTGGTAAGTGATGCAATTTCCATTAGCTTCAGGATGCTCGCTTGCCCCTTTTTGTATATTAATGAAATATCATTTTCTTATTAGAAGAAAATAATTACAATTCTTTTTAACCTTTTATCATGTACCAAGATCAAGTTTCACAAAGTATACCTATAAATTAGCGAGTATTGTTAAACGACACTTCTGCTCTCGTAGTTTGCATTCAATCTTATACTGTATATCCTTTGTTTTTCTTTTAACCGTCCTTTTAGCATTTTTCAAGCTTGCTCGTCTTTTTGCTTATGGAAATTAATAAAAGCCCAAACTTGTTGTGTCGTGGCTGCTTCTAGAACCTCGAGTTGAGAAACTACAACTTCGAACCATGTCTCACATCGTGAATGCAAGCAATGCTGTGCGAGTTTAATCTTCGCTATAGAGAATTTCTCCTTGCTCTGGATTTATAATAGGAGCTAAACTAACATTTTGGTTTTTCTGCTCATCTACTGTAACCACAGATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACAGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAAGTATGTATCATTTCTGTTCATGCTTTTGCCCACTTCATTTGCATTTTCTTTACGAACCTTACCGACGACGCCTGCCCCGCACAGGGCGAGGTTGGTTACTGGCCATATTCTTCTTTGAGCTTGGTAACAGAGACGTGATGAGCTTTTGTTTGTTTGTTTTTGGCTTTTAGTTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAG

mRNA sequence

ATGTCTGGAATTGGACCCATTTCACAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTAAACGCCGCCCGCCGCGCCGGTGCCGAGATCGAAACCTTAAAGAAATCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGAACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACAGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAATTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAG

Coding sequence (CDS)

ATGTCTGGAATTGGACCCATTTCACAGGATTGGGAACCTGTTGTCATCAGGAAGAAGGCTCCCAACGCCGCCGCCAAGAAGGACGAGAAAGCTGTAAACGCCGCCCGCCGCGCCGGTGCCGAGATCGAAACCTTAAAGAAATCTAATGCTGGAACAAATAAAGCTGCCTCTAGCGGAACCAGTTTGAATACCAGGAAGTTGGATGATGAGACAGAAAATCTCTCTCATGAAAAGGTACCAACTGAGCTGAAGAAGGCCATTATGCAGGCTCGAACAGATAAGAAGCTCACTCAGTCTCAGCTTGCTCAATTGATCAATGAGAAGCCACAAATCATTCAGGAGTACGAATCTGGCAAAGCCATTCCAAATCAACAAATAATCACCAAGCTTGAGAGAGCTCTTGGAACTAAGCTTCGTGGAAAAAAGTAG

Protein sequence

MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGTSLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIITKLERALGTKLRGKK

Homology

[Close]

BLAST of Csor.00g232380 vs. ExPASy Swiss-Prot
Match: Q9SJI8 (Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.5e-60
Identity = 121/142 (85.21%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPI+QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET++K NAGTNKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+ LDD+TENL+HE+VPTELKKAIMQARTDKKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. ExPASy Swiss-Prot
Match: Q9LXT3 (Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 6.0e-60
Identity = 120/142 (84.51%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPI+QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET++K NAG+NKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+KLDD+TENLSH++VPTELKKAIMQAR +KKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. ExPASy Swiss-Prot
Match: Q9LV58 (Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-28
Identity = 66/139 (47.48%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 5   GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT--SL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK +AG+NK   S     +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIP 124
           NT+KL++ETE  + ++V  E++  I +AR +KK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGTKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]

BLAST of Csor.00g232380 vs. ExPASy Swiss-Prot
Match: Q6GPQ6 (Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 GN=edf1 PE=2 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.9e-28
Identity = 72/133 (54.14%), Postives = 92/133 (69.17%), Query Frame = 0


Query: 10  DWEPV-VIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGTSLNTRKLD 69
           DW+ V V+RKK P AA  K ++A+ AA+R G E+ET KK +AG NK  +   + NT KLD
Sbjct: 5   DWDTVTVLRKKGPTAAQAKSKQAITAAQRRGEEVETSKKWSAGQNKQHT--ITRNTAKLD 64

Query: 70  DETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIIT 129
            ETE L H++VP E+ K I Q R  K +TQ  LA  INEKPQ+I +YE GKAIPN Q++ 
Sbjct: 65  RETEELHHDRVPLEVGKVIQQGRQGKGMTQKDLATKINEKPQVIADYECGKAIPNNQVMG 124

Query: 130 KLERALGTKLRGK 142
           K+ER +G KLRGK
Sbjct: 125 KIERVIGLKLRGK 135

[Close]

BLAST of Csor.00g232380 vs. ExPASy Swiss-Prot
Match: Q6PBY3 (Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=edf1 PE=2 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.3e-27
Identity = 73/132 (55.30%), Postives = 90/132 (68.18%), Query Frame = 0


Query: 10  DWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGTSLNTRKLDD 69
           DW+ V + +K  +AA  K ++AV AA+R G  +ET KK  AG NK      + NT KLD 
Sbjct: 5   DWDTVTVLRKKGSAAQSKSKQAVTAAQRKGEAVETSKKWAAGQNK--QHVVTKNTAKLDR 64

Query: 70  ETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIITK 129
           ETE LSH++VP E+ K I Q R +K LTQ  LA  INEKPQII EYE GKAIPN Q++ K
Sbjct: 65  ETEELSHQRVPLEVGKVIQQGRQNKGLTQKDLATKINEKPQIIAEYECGKAIPNNQVMGK 124

Query: 130 LERALGTKLRGK 142
           +ERA+G KLRGK
Sbjct: 125 IERAIGLKLRGK 134

[Close]

BLAST of Csor.00g232380 vs. NCBI nr
Match: XP_022930773.1 (multiprotein-bridging factor 1a [Cucurbita moschata] >XP_022989002.1 multiprotein-bridging factor 1a [Cucurbita maxima] >KAG6589237.1 Multiprotein-bridging factor 1a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7022935.1 Multiprotein-bridging factor 1a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259 bits (661), Expect = 1.47e-86
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. NCBI nr
Match: XP_023532017.1 (multiprotein-bridging factor 1a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258 bits (658), Expect = 4.23e-86
Identity = 141/142 (99.30%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. NCBI nr
Match: XP_022148069.1 (multiprotein-bridging factor 1a [Momordica charantia])

HSP 1 Score: 251 bits (642), Expect = 1.16e-83
Identity = 136/142 (95.77%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIETLKKSNAGTNKAASS T
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQARTDKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTDKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. NCBI nr
Match: XP_038888605.1 (multiprotein-bridging factor 1b [Benincasa hispida])

HSP 1 Score: 250 bits (639), Expect = 3.34e-83
Identity = 136/142 (95.77%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASS T
Sbjct: 1   MTGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLAHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. NCBI nr
Match: XP_022952433.1 (multiprotein-bridging factor 1b-like [Cucurbita moschata])

HSP 1 Score: 249 bits (635), Expect = 1.36e-82
Identity = 134/142 (94.37%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPISQDWEP+VIRKKAPNAAAKKDEKAVNAARRAGAEIETL+KSNAGTNKAASS T
Sbjct: 1   MAGIGPISQDWEPIVIRKKAPNAAAKKDEKAVNAARRAGAEIETLRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. ExPASy TrEMBL
Match: A0A6J1JEK2 (multiprotein-bridging factor 1a OS=Cucurbita maxima OX=3661 GN=LOC111486196 PE=4 SV=1)

HSP 1 Score: 259 bits (661), Expect = 7.14e-87
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. ExPASy TrEMBL
Match: A0A6J1EWB8 (multiprotein-bridging factor 1a OS=Cucurbita moschata OX=3662 GN=LOC111437149 PE=4 SV=1)

HSP 1 Score: 259 bits (661), Expect = 7.14e-87
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. ExPASy TrEMBL
Match: A0A6J1D2X2 (multiprotein-bridging factor 1a OS=Momordica charantia OX=3673 GN=LOC111016839 PE=4 SV=1)

HSP 1 Score: 251 bits (642), Expect = 5.63e-84
Identity = 136/142 (95.77%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARR+GAEIETLKKSNAGTNKAASS T
Sbjct: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRSGAEIETLKKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQARTDKKLTQSQLAQLINEKPQ+IQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTDKKLTQSQLAQLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. ExPASy TrEMBL
Match: A0A6J1GKJ7 (multiprotein-bridging factor 1b-like OS=Cucurbita moschata OX=3662 GN=LOC111455121 PE=4 SV=1)

HSP 1 Score: 249 bits (635), Expect = 6.58e-83
Identity = 134/142 (94.37%), Postives = 141/142 (99.30%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPISQDWEP+VIRKKAPNAAAKKDEKAVNAARRAGAEIETL+KSNAGTNKAASS T
Sbjct: 1   MAGIGPISQDWEPIVIRKKAPNAAAKKDEKAVNAARRAGAEIETLRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. ExPASy TrEMBL
Match: A0A6J1HZG6 (multiprotein-bridging factor 1b-like OS=Cucurbita maxima OX=3661 GN=LOC111468320 PE=4 SV=1)

HSP 1 Score: 247 bits (630), Expect = 3.80e-82
Identity = 134/142 (94.37%), Postives = 140/142 (98.59%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIET +KSNAGTNKAASS T
Sbjct: 1   MAGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETSRKSNAGTNKAASSST 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNTRKLDDETENL+H++VPTELKKAIMQART+KKLTQSQLAQLINEKPQIIQEYESGKA
Sbjct: 61  SLNTRKLDDETENLTHDRVPTELKKAIMQARTEKKLTQSQLAQLINEKPQIIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 142
           IPNQQIITKLERALGTKLRGKK
Sbjct: 121 IPNQQIITKLERALGTKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. TAIR 10
Match: AT2G42680.1 (multiprotein bridging factor 1A )

HSP 1 Score: 232.3 bits (591), Expect = 2.5e-61
Identity = 121/142 (85.21%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPI+QDWEPVVIRKK  NAAAK+DEK VNAARR+GA+IET++K NAGTNKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKKPANAAAKRDEKTVNAARRSGADIETVRKFNAGTNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+ LDD+TENL+HE+VPTELKKAIMQARTDKKLTQSQLAQ+INEKPQ+IQEYESGKA
Sbjct: 61  SLNTKMLDDDTENLTHERVPTELKKAIMQARTDKKLTQSQLAQIINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. TAIR 10
Match: AT3G58680.1 (multiprotein bridging factor 1B )

HSP 1 Score: 231.5 bits (589), Expect = 4.2e-61
Identity = 120/142 (84.51%), Postives = 137/142 (96.48%), Query Frame = 0


Query: 1   MSGIGPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT 60
           M+GIGPI+QDWEPVVIRK+APNAAAK+DEK VNAARR+GA+IET++K NAG+NKAASSGT
Sbjct: 1   MAGIGPITQDWEPVVIRKRAPNAAAKRDEKTVNAARRSGADIETVRKFNAGSNKAASSGT 60

Query: 61  SLNTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKA 120
           SLNT+KLDD+TENLSH++VPTELKKAIMQAR +KKLTQSQLA LINEKPQ+IQEYESGKA
Sbjct: 61  SLNTKKLDDDTENLSHDRVPTELKKAIMQARGEKKLTQSQLAHLINEKPQVIQEYESGKA 120

Query: 121 IPNQQIITKLERALGTKLRGKK 143
           IPNQQI++KLERALG KLRGKK
Sbjct: 121 IPNQQILSKLERALGAKLRGKK 142

[Close]

BLAST of Csor.00g232380 vs. TAIR 10
Match: AT3G24500.1 (multiprotein bridging factor 1C )

HSP 1 Score: 126.3 bits (316), Expect = 1.9e-29
Identity = 66/139 (47.48%), Postives = 100/139 (71.94%), Query Frame = 0


Query: 5   GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT--SL 64
           G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK +AG+NK   S     +
Sbjct: 7   GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65  NTRKLDDETENLSHEKVPTELKKAIMQARTDKKLTQSQLAQLINEKPQIIQEYESGKAIP 124
           NT+KL++ETE  + ++V  E++  I +AR +KK++Q+ LA+ INE+ Q++QEYE+GKA+P
Sbjct: 67  NTKKLEEETEPAAMDRVKAEVRLMIQKARLEKKMSQADLAKQINERTQVVQEYENGKAVP 126

Query: 125 NQQIITKLERALGTKLRGK 142
           NQ ++ K+E+ LG KLRGK
Sbjct: 127 NQAVLAKMEKVLGVKLRGK 145

[Close]

BLAST of Csor.00g232380 vs. TAIR 10
Match: AT3G24500.2 (multiprotein bridging factor 1C )

HSP 1 Score: 61.2 bits (147), Expect = 7.6e-10
Identity = 36/89 (40.45%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 5  GPISQDWEPVVIRKKAPNAAAKKDEKAVNAARRAGAEIETLKKSNAGTNKAASSGT--SL 64
          G ++QDWEPVV+ K    +   +D KAVNAA R G  ++T+KK +AG+NK   S     +
Sbjct: 7  GAVTQDWEPVVLHKSKQKSQDLRDPKAVNAALRNGVAVQTVKKFDAGSNKKGKSTAVPVI 66

Query: 65 NTRKLDDETENLSHEKVPTELKKAIMQAR 92
          NT+KL++ETE  + ++V  E++  + + R
Sbjct: 67 NTKKLEEETEPAAMDRVKAEVRLCLRRWR 95

The following BLAST results are available for this feature:

BLAST of Csor.00g232380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJI8	3.5e-60	85.21	Multiprotein-bridging factor 1a OS=Arabidopsis thaliana OX=3702 GN=MBF1A PE=2 SV...	[more]
Q9LXT3	6.0e-60	84.51	Multiprotein-bridging factor 1b OS=Arabidopsis thaliana OX=3702 GN=MBF1B PE=1 SV...	[more]
Q9LV58	2.7e-28	47.48	Multiprotein-bridging factor 1c OS=Arabidopsis thaliana OX=3702 GN=MBF1C PE=1 SV...	[more]
Q6GPQ6	7.9e-28	54.14	Endothelial differentiation-related factor 1 homolog OS=Xenopus laevis OX=8355 G...	[more]
Q6PBY3	1.3e-27	55.30	Endothelial differentiation-related factor 1 homolog OS=Danio rerio OX=7955 GN=e...	[more]

BLAST of Csor.00g232380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930773.1	1.47e-86	100.00	multiprotein-bridging factor 1a [Cucurbita moschata] >XP_022989002.1 multiprotei...	[more]
XP_023532017.1	4.23e-86	99.30	multiprotein-bridging factor 1a [Cucurbita pepo subsp. pepo]	[more]
XP_022148069.1	1.16e-83	95.77	multiprotein-bridging factor 1a [Momordica charantia]	[more]
XP_038888605.1	3.34e-83	95.77	multiprotein-bridging factor 1b [Benincasa hispida]	[more]
XP_022952433.1	1.36e-82	94.37	multiprotein-bridging factor 1b-like [Cucurbita moschata]	[more]

BLAST of Csor.00g232380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JEK2	7.14e-87	100.00	multiprotein-bridging factor 1a OS=Cucurbita maxima OX=3661 GN=LOC111486196 PE=4...	[more]
A0A6J1EWB8	7.14e-87	100.00	multiprotein-bridging factor 1a OS=Cucurbita moschata OX=3662 GN=LOC111437149 PE...	[more]
A0A6J1D2X2	5.63e-84	95.77	multiprotein-bridging factor 1a OS=Momordica charantia OX=3673 GN=LOC111016839 P...	[more]
A0A6J1GKJ7	6.58e-83	94.37	multiprotein-bridging factor 1b-like OS=Cucurbita moschata OX=3662 GN=LOC1114551...	[more]
A0A6J1HZG6	3.80e-82	94.37	multiprotein-bridging factor 1b-like OS=Cucurbita maxima OX=3661 GN=LOC111468320...	[more]

BLAST of Csor.00g232380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G42680.1	2.5e-61	85.21	multiprotein bridging factor 1A	[more]
AT3G58680.1	4.2e-61	84.51	multiprotein bridging factor 1B	[more]
AT3G24500.1	1.9e-29	47.48	multiprotein bridging factor 1C	[more]
AT3G24500.2	7.6e-10	40.45	multiprotein bridging factor 1C	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 87..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..78
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..64
None	No IPR available	PANTHER	PTHR10245	ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1	coord: 1..142
None	No IPR available	PANTHER	PTHR10245:SF118	MULTIPROTEIN BRIDGING FACTOR 1B	coord: 1..142
IPR001387	Cro/C1-type helix-turn-helix domain	SMART	SM00530	mbf_short4	coord: 86..141 e-value: 4.3E-10 score: 49.5
IPR001387	Cro/C1-type helix-turn-helix domain	PFAM	PF01381	HTH_3	coord: 87..138 e-value: 1.8E-12 score: 47.1
IPR001387	Cro/C1-type helix-turn-helix domain	PROSITE	PS50943	HTH_CROC1	coord: 87..141 score: 12.233327
IPR001387	Cro/C1-type helix-turn-helix domain	CDD	cd00093	HTH_XRE	coord: 85..138 e-value: 3.80852E-9 score: 47.933
IPR013729	Multiprotein bridging factor 1, N-terminal	PFAM	PF08523	MBF1	coord: 9..79 e-value: 3.1E-23 score: 82.0
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	GENE3D	1.10.260.40		coord: 71..142 e-value: 2.2E-28 score: 99.6
IPR010982	Lambda repressor-like, DNA-binding domain superfamily	SUPERFAMILY	47413	lambda repressor-like DNA-binding domains	coord: 81..138

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g232380.m01	Csor.00g232380.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding