Csor.00g232250 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g232250
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ethylene-responsive transcription factor
Location	Csor_Chr11: 14442498 .. 14443136 (+)
RNA-Seq Expression	Csor.00g232250
Synteny	Csor.00g232250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTCCAAAGAGAAATCCACCGCCAAAAAGCTTCCTTCTCTCTGCAACACCAACAACAATGCCAGAGAACTCCATTTCCGAGGCGTTCGTAAGAGGCCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAGAGCCGCGTTTGGCTCGGAACCTTCGACACGGCGGAGGAGGCGGCGTATGCTTACGATAACGCCGCGCGCCAGTTCCGCGGCGCAAAAGCTAAAACCAATTTCCCTCCACCTGATGAGTTGATCGACGTTTCTCCTCGCAAGATCAGCCAAAGCCCTAGCCCTAGCAGCACCGTCGAATCCTCTTCCTCCTCCAGCCAAGAAAAAACTCCCTCAACGGAGATCGTCCGTAGCTACGGCGTCGCACGAACTTTTCCGTTCATTCAGCCGCAGTTTTTGCATCAAGTCGGCGGAGGCGGTAGCGCTCGTCCTGTTTTGTTCATGGATGCTTTTGTTCGACCTGAGTTTGTCGCTCAGGGCTATCCTATTCGGTACGATTCGGCAAGGTTCGCCGCCGAGATCCAGACCAAATCGGACTCATTGTCCGTGGTTGATTGCCGGCCGGCGAAGGAAATTCTCAATCTCGACCTTAATCTCGCTCCGCCCGTGGATGCTTGA

mRNA sequence

ATGGTTTCCAAAGAGAAATCCACCGCCAAAAAGCTTCCTTCTCTCTGCAACACCAACAACAATGCCAGAGAACTCCATTTCCGAGGCGTTCGTAAGAGGCCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAGAGCCGCGTTTGGCTCGGAACCTTCGACACGGCGGAGGAGGCGGCGTATGCTTACGATAACGCCGCGCGCCAGTTCCGCGGCGCAAAAGCTAAAACCAATTTCCCTCCACCTGATGAGTTGATCGACGTTTCTCCTCGCAAGATCAGCCAAAGCCCTAGCCCTAGCAGCACCGTCGAATCCTCTTCCTCCTCCAGCCAAGAAAAAACTCCCTCAACGGAGATCGTCCGTAGCTACGGCGTCGCACGAACTTTTCCGTTCATTCAGCCGCAGTTTTTGCATCAAGTCGGCGGAGGCGGTAGCGCTCGTCCTGTTTTGTTCATGGATGCTTTTGTTCGACCTGAGTTTGTCGCTCAGGGCTATCCTATTCGGTACGATTCGGCAAGGTTCGCCGCCGAGATCCAGACCAAATCGGACTCATTGTCCGTGGTTGATTGCCGGCCGGCGAAGGAAATTCTCAATCTCGACCTTAATCTCGCTCCGCCCGTGGATGCTTGA

Coding sequence (CDS)

ATGGTTTCCAAAGAGAAATCCACCGCCAAAAAGCTTCCTTCTCTCTGCAACACCAACAACAATGCCAGAGAACTCCATTTCCGAGGCGTTCGTAAGAGGCCTTGGGGCCGATACGCCGCCGAGATCCGAGATCCCGGCAAGAAGAGCCGCGTTTGGCTCGGAACCTTCGACACGGCGGAGGAGGCGGCGTATGCTTACGATAACGCCGCGCGCCAGTTCCGCGGCGCAAAAGCTAAAACCAATTTCCCTCCACCTGATGAGTTGATCGACGTTTCTCCTCGCAAGATCAGCCAAAGCCCTAGCCCTAGCAGCACCGTCGAATCCTCTTCCTCCTCCAGCCAAGAAAAAACTCCCTCAACGGAGATCGTCCGTAGCTACGGCGTCGCACGAACTTTTCCGTTCATTCAGCCGCAGTTTTTGCATCAAGTCGGCGGAGGCGGTAGCGCTCGTCCTGTTTTGTTCATGGATGCTTTTGTTCGACCTGAGTTTGTCGCTCAGGGCTATCCTATTCGGTACGATTCGGCAAGGTTCGCCGCCGAGATCCAGACCAAATCGGACTCATTGTCCGTGGTTGATTGCCGGCCGGCGAAGGAAATTCTCAATCTCGACCTTAATCTCGCTCCGCCCGTGGATGCTTGA

Protein sequence

MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA

Homology

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BLAST of Csor.00g232250 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 5.6e-38
Identity = 109/227 (48.02%), Postives = 134/227 (59.03%), Query Frame = 0


Query: 6   KSTAKKLPSLCN-TNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAY 65
           K   K  P+  N T+NNA+E+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAA 
Sbjct: 3   KMGLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAAR 62

Query: 66  AYDNAARQFRGAKAKTNFPPPDELIDVS-PRKISQSPSPSSTVESSSSSSQEKTPSTEIV 125
           AYD AAR FRGAKAKTNFP   EL D   P   ++SPS SST++ +S       P T +V
Sbjct: 63  AYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCAS-------PPTLVV 122

Query: 126 RSYGVARTFPFIQPQFLHQVGGGGS--------ARPVLFMDAF-------VRPEFVAQGY 185
            S     T   + PQ    +GGGG         +RPV F+D          +P  V   +
Sbjct: 123 PS----ATAGNVPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAF 182

Query: 186 --PIRYDSARFAAEIQTKSDSLSVVDCRPAKE----ILNLDLNLAPP 210
             P+ + + + A   Q+ SDS SVVD     E    +L+LDLNL PP
Sbjct: 183 RSPVVHVATKMACGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLPPP 218

[Close]

BLAST of Csor.00g232250 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 100/214 (46.73%), Postives = 119/214 (55.61%), Query Frame = 0


Query: 20  NNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAK 79
           +  +E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAA AYD AAR+FRG KAK
Sbjct: 20  DGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAK 79

Query: 80  TNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTP-----STEIVRSYG------- 139
           TNFP P E         +QSPS SSTVESSS  +    P       ++ R  G       
Sbjct: 80  TNFPSPTE---------NQSPSHSSTVESSSGENGVHAPPHAPLELDLTRRLGSVAADGG 139

Query: 140 --VARTFPFIQPQFLHQ--VGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARF----AA 199
               R+     P F  Q  V    + +PVL  D+  R   V +  P       F    A 
Sbjct: 140 DNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRAGVVNRPQPYHVTPMGFNGVNAG 199

Query: 200 EIQTKSDSLSVVDCR--PAKEILNLDLNLAPPVD 212
              T SDS S V+      K  ++LDLNLAPP++
Sbjct: 200 VGPTVSDSSSAVEENQYDGKRGIDLDLNLAPPME 224

[Close]

BLAST of Csor.00g232250 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 3.5e-32
Identity = 102/216 (47.22%), Postives = 121/216 (56.02%), Query Frame = 0


Query: 20  NNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAK 79
           N  +E+H+RGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAA AYD AAR+FRG KAK
Sbjct: 20  NGVKEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAK 79

Query: 80  TNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTP-----STEIVRSYG------- 139
           TNFP P E         +QS S SST+ESSS  +    P       ++ R  G       
Sbjct: 80  TNFPLPSE---------NQSTSHSSTMESSSGETGIHAPPHAPLELDLTRRLGSVAADGG 139

Query: 140 --VARTFPFIQPQFLHQ--VGGGGSARPVLFMDAFVRPEFV--AQGYPIRYDSARF---- 199
               R+     P F  Q  V    + +PVL  D+  RP  V   Q Y +   +  F    
Sbjct: 140 DNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRPGVVNRPQPYHVMPMAMGFNGVN 199

Query: 200 AAEIQTKSDSLSVVDCR--PAKEILNLDLNLAPPVD 212
           A    T SDS SVV+      K  ++LDLNLAPP +
Sbjct: 200 AGVDPTVSDSSSVVEENQYDGKRGIDLDLNLAPPTE 226

[Close]

BLAST of Csor.00g232250 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 137.9 bits (346), Expect = 1.3e-31
Identity = 91/192 (47.40%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 23  RELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAKTNF 82
           +E+HFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAA AYD AAR+FRG+KAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 83  PPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQFLHQ 142
           P P E   V+    + S    +TV ++   ++++               FPF   +    
Sbjct: 89  PLPGESTTVNDGGENDSYVNRTTVTTAREMTRQR---------------FPFACHRERKV 148

Query: 143 VGGGGSARPVLFMD----AFVRPEFVAQGYPIRYDSARFAAEIQTKSDSLSVVDCRPAKE 202
           VGG  SA    F D    A +R E +++  P+R+D       I  +      V   P +E
Sbjct: 149 VGGYASAG--FFFDPSRAASLRAE-LSRVCPVRFDPVNIELSIGIR----ETVKVEPRRE 197

Query: 203 ILNLDLNLAPPV 211
            LNLDLNLAPPV
Sbjct: 209 -LNLDLNLAPPV 197

[Close]

BLAST of Csor.00g232250 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 4.5e-27
Identity = 84/204 (41.18%), Postives = 109/204 (53.43%), Query Frame = 0


Query: 19  NNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKA 78
           +N A+E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AA AYD AAR FRG KA
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 79  KTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQ 138
           KTNF             +  SP+ SSTV  S ++++  TP                  P 
Sbjct: 83  KTNFGV----------IVGSSPTQSSTVVDSPTAARFITP------------------PH 142

Query: 139 FLHQVGGGGSAR-------PVLFMDAFVRPEFVAQGYPIRYDSARFAAEIQTKSDSLSVV 198
               +GGGG+ R       PV + +    P+    G             +Q++S++ SVV
Sbjct: 143 LELSLGGGGACRRKIPLVHPVYYYNMATYPKMTTCG-------------VQSESETSSVV 185

Query: 199 D----CRPAKEILNLDLNLAPPVD 212
           D           L+LDLNLAPP +
Sbjct: 203 DFEGGAGKISPPLDLDLNLAPPAE 185

[Close]

BLAST of Csor.00g232250 vs. NCBI nr
Match: KAG6589250.1 (Ethylene-responsive transcription factor 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 417 bits (1073), Expect = 4.46e-147
Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST
Sbjct: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE 180
           EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE
Sbjct: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE 180

Query: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
           IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212

[Close]

BLAST of Csor.00g232250 vs. NCBI nr
Match: KAG7022949.1 (Ethylene-responsive transcription factor 9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 416 bits (1068), Expect = 2.58e-146
Identity = 211/212 (99.53%), Postives = 212/212 (100.00%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MVSKEKSTAKKLPSLC+TNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVSKEKSTAKKLPSLCDTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST
Sbjct: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE 180
           EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE
Sbjct: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE 180

Query: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
           IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212

[Close]

BLAST of Csor.00g232250 vs. NCBI nr
Match: XP_023531239.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 412 bits (1059), Expect = 6.08e-145
Identity = 209/212 (98.58%), Postives = 210/212 (99.06%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKIS SPSPSSTVESSSSSSQEKTPS 
Sbjct: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISHSPSPSSTVESSSSSSQEKTPSP 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE 180
           EIVRSYGVARTFPFIQPQFLHQVGGGG+ARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE
Sbjct: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGTARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE 180

Query: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
           IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212

[Close]

BLAST of Csor.00g232250 vs. NCBI nr
Match: XP_022930838.1 (ethylene-responsive transcription factor 4-like [Cucurbita moschata])

HSP 1 Score: 412 bits (1059), Expect = 6.53e-145
Identity = 211/214 (98.60%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST
Sbjct: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGS--ARPVLFMDAFVRPEFVAQGYPIRYDSARFA 180
           EIVRSYGVARTFPFIQPQFLHQVGGGGS  ARPVLFMDAFVRPEF+AQGYPIRYDSARFA
Sbjct: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSGSARPVLFMDAFVRPEFIAQGYPIRYDSARFA 180

Query: 181 AEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
           AEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 AEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 214

[Close]

BLAST of Csor.00g232250 vs. NCBI nr
Match: XP_022989129.1 (ethylene-responsive transcription factor 4-like [Cucurbita maxima])

HSP 1 Score: 408 bits (1048), Expect = 2.89e-143
Identity = 208/212 (98.11%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MVSKEKSTAKKLP LCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVSKEKSTAKKLPPLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAAYAYDNAARQFRGAKAKTNFP PDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPS 
Sbjct: 61  EAAYAYDNAARQFRGAKAKTNFPLPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSP 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE 180
           EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFA E
Sbjct: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAGE 180

Query: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
           IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212

[Close]

BLAST of Csor.00g232250 vs. ExPASy TrEMBL
Match: A0A6J1EWM0 (ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN=LOC111437205 PE=4 SV=1)

HSP 1 Score: 412 bits (1059), Expect = 3.16e-145
Identity = 211/214 (98.60%), Postives = 212/214 (99.07%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST
Sbjct: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGS--ARPVLFMDAFVRPEFVAQGYPIRYDSARFA 180
           EIVRSYGVARTFPFIQPQFLHQVGGGGS  ARPVLFMDAFVRPEF+AQGYPIRYDSARFA
Sbjct: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSGSARPVLFMDAFVRPEFIAQGYPIRYDSARFA 180

Query: 181 AEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
           AEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 AEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 214

[Close]

BLAST of Csor.00g232250 vs. ExPASy TrEMBL
Match: A0A6J1JNH6 (ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111486294 PE=4 SV=1)

HSP 1 Score: 408 bits (1048), Expect = 1.40e-143
Identity = 208/212 (98.11%), Postives = 208/212 (98.11%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MVSKEKSTAKKLP LCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVSKEKSTAKKLPPLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAAYAYDNAARQFRGAKAKTNFP PDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPS 
Sbjct: 61  EAAYAYDNAARQFRGAKAKTNFPLPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSP 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAAE 180
           EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFA E
Sbjct: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSARFAGE 180

Query: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
           IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA
Sbjct: 181 IQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212

[Close]

BLAST of Csor.00g232250 vs. ExPASy TrEMBL
Match: A0A5A7SPZ4 (Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003160 PE=4 SV=1)

HSP 1 Score: 327 bits (837), Expect = 2.14e-111
Identity = 173/218 (79.36%), Postives = 186/218 (85.32%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MV+KEKS+   LPSL  +NNN ++LHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVAKEKSSPNNLPSL--SNNNGKDLHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD AARQFRGAKAKTNFPPPDELIDVSP KI+QSPSPSSTV+SSSSSS EKTPS 
Sbjct: 61  EAARAYDTAARQFRGAKAKTNFPPPDELIDVSPHKINQSPSPSSTVDSSSSSSHEKTPSP 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSA----- 180
           EI RSYGV RTFPFIQPQFLH  GGGGS RPVLF+D F +PEFVA GYPIR+D A     
Sbjct: 121 EISRSYGVGRTFPFIQPQFLH--GGGGSVRPVLFVDVFGKPEFVAHGYPIRFDPATVDLT 180

Query: 181 -RFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
            RF   IQ+ S+S S+VD RPAKEILNLDLNLAPPVDA
Sbjct: 181 SRFTGGIQSDSNSSSLVDFRPAKEILNLDLNLAPPVDA 214

[Close]

BLAST of Csor.00g232250 vs. ExPASy TrEMBL
Match: A0A1S3C1T3 (LOW QUALITY PROTEIN: ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC103495486 PE=4 SV=1)

HSP 1 Score: 325 bits (832), Expect = 1.24e-110
Identity = 172/218 (78.90%), Postives = 187/218 (85.78%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MV+KEKS+ ++ PSL  +NNN ++LHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVAKEKSSPQQPPSL--SNNNGKDLHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD AARQFRGAKAKTNFPPPDELIDVSP KI+QSPSPSSTV+SSSSSS EKTPS 
Sbjct: 61  EAARAYDTAARQFRGAKAKTNFPPPDELIDVSPHKINQSPSPSSTVDSSSSSSHEKTPSP 120

Query: 121 EIVRSYGVARTFPFIQPQFLHQVGGGGSARPVLFMDAFVRPEFVAQGYPIRYDSA----- 180
           EI RSYGV RTFPFIQPQFLH  GGGGS RPVLF+D F +PEFVA GYPIR+D A     
Sbjct: 121 EISRSYGVGRTFPFIQPQFLH--GGGGSVRPVLFVDVFGKPEFVAHGYPIRFDPATVDLT 180

Query: 181 -RFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
            RF   IQ+ S+S S+VD RPAKEILNLDLNLAPPVDA
Sbjct: 181 SRFTGGIQSDSNSSSLVDFRPAKEILNLDLNLAPPVDA 214

[Close]

BLAST of Csor.00g232250 vs. ExPASy TrEMBL
Match: A0A6J1GM68 (ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN=LOC111455632 PE=4 SV=1)

HSP 1 Score: 324 bits (831), Expect = 3.17e-110
Identity = 176/232 (75.86%), Postives = 189/232 (81.47%), Query Frame = 0


Query: 1   MVSKEKSTAKKLPSLCNTNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60
           MV+KEKS AK LPSLCN N  A+ELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE
Sbjct: 1   MVAKEKSAAKSLPSLCN-NTYAKELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAE 60

Query: 61  EAAYAYDNAARQFRGAKAKTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPST 120
           EAA AYD+AARQFRGAKAKTNFP  +ELIDVSP+KI+QSPSPSSTVESSSSSSQEKTPS 
Sbjct: 61  EAARAYDSAARQFRGAKAKTNFPLEEELIDVSPQKINQSPSPSSTVESSSSSSQEKTPSP 120

Query: 121 EIVRSYG----VARTFPFIQPQFLHQVG----------GGGSARPVLFMDAFVRPEFVAQ 180
           EI R+YG    V RT PF+QPQFLHQVG           GG  RP+LFMDAFVRPEFVA 
Sbjct: 121 EIARNYGATVGVGRTSPFLQPQFLHQVGCNVSAAAAAGSGGGVRPILFMDAFVRPEFVAH 180

Query: 181 GYPIRYD------SARFAAEIQTKSDSLSVVDCRPAKEILNLDLNLAPPVDA 212
           GYPIR+D      +ARF+    + SDS SVVDCRP KEILNLDLNLAPPVDA
Sbjct: 181 GYPIRFDPATVDLTARFSGGSHSDSDSSSVVDCRPVKEILNLDLNLAPPVDA 231

[Close]

BLAST of Csor.00g232250 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 159.1 bits (401), Expect = 4.0e-39
Identity = 109/227 (48.02%), Postives = 134/227 (59.03%), Query Frame = 0


Query: 6   KSTAKKLPSLCN-TNNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAY 65
           K   K  P+  N T+NNA+E+ +RGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAA 
Sbjct: 3   KMGLKPDPATTNQTHNNAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAAR 62

Query: 66  AYDNAARQFRGAKAKTNFPPPDELIDVS-PRKISQSPSPSSTVESSSSSSQEKTPSTEIV 125
           AYD AAR FRGAKAKTNFP   EL D   P   ++SPS SST++ +S       P T +V
Sbjct: 63  AYDTAARDFRGAKAKTNFPTFLELSDQKVPTGFARSPSQSSTLDCAS-------PPTLVV 122

Query: 126 RSYGVARTFPFIQPQFLHQVGGGGS--------ARPVLFMDAF-------VRPEFVAQGY 185
            S     T   + PQ    +GGGG         +RPV F+D          +P  V   +
Sbjct: 123 PS----ATAGNVPPQLELSLGGGGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAF 182

Query: 186 --PIRYDSARFAAEIQTKSDSLSVVDCRPAKE----ILNLDLNLAPP 210
             P+ + + + A   Q+ SDS SVVD     E    +L+LDLNL PP
Sbjct: 183 RSPVVHVATKMACGAQSDSDSSSVVDFEGGMEKRSQLLDLDLNLPPP 218

[Close]

BLAST of Csor.00g232250 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 137.9 bits (346), Expect = 9.5e-33
Identity = 91/192 (47.40%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 23  RELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAKTNF 82
           +E+HFRGVRKRPWGRYAAEIRDPGKK+RVWLGTFDTAEEAA AYD AAR+FRG+KAKTNF
Sbjct: 29  KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 83  PPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQFLHQ 142
           P P E   V+    + S    +TV ++   ++++               FPF   +    
Sbjct: 89  PLPGESTTVNDGGENDSYVNRTTVTTAREMTRQR---------------FPFACHRERKV 148

Query: 143 VGGGGSARPVLFMD----AFVRPEFVAQGYPIRYDSARFAAEIQTKSDSLSVVDCRPAKE 202
           VGG  SA    F D    A +R E +++  P+R+D       I  +      V   P +E
Sbjct: 149 VGGYASAG--FFFDPSRAASLRAE-LSRVCPVRFDPVNIELSIGIR----ETVKVEPRRE 197

Query: 203 ILNLDLNLAPPV 211
            LNLDLNLAPPV
Sbjct: 209 -LNLDLNLAPPV 197

[Close]

BLAST of Csor.00g232250 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 122.9 bits (307), Expect = 3.2e-28
Identity = 84/204 (41.18%), Postives = 109/204 (53.43%), Query Frame = 0


Query: 19  NNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKA 78
           +N A+E+ +RGVRKRPWGRYAAEIRDP KK+RVWLGTFDTA++AA AYD AAR FRG KA
Sbjct: 23  SNAAKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKA 82

Query: 79  KTNFPPPDELIDVSPRKISQSPSPSSTVESSSSSSQEKTPSTEIVRSYGVARTFPFIQPQ 138
           KTNF             +  SP+ SSTV  S ++++  TP                  P 
Sbjct: 83  KTNFGV----------IVGSSPTQSSTVVDSPTAARFITP------------------PH 142

Query: 139 FLHQVGGGGSAR-------PVLFMDAFVRPEFVAQGYPIRYDSARFAAEIQTKSDSLSVV 198
               +GGGG+ R       PV + +    P+    G             +Q++S++ SVV
Sbjct: 143 LELSLGGGGACRRKIPLVHPVYYYNMATYPKMTTCG-------------VQSESETSSVV 185

Query: 199 D----CRPAKEILNLDLNLAPPVD 212
           D           L+LDLNLAPP +
Sbjct: 203 DFEGGAGKISPPLDLDLNLAPPAE 185

[Close]

BLAST of Csor.00g232250 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-24
Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 0


Query: 19 NNNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKA 78
          N + +E+ FRGVRKRPWGR+AAEIRDP KK+RVWLGTFD+AEEAA AYD+AAR  RG KA
Sbjct: 20 NGSVKEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKA 79

Query: 79 KTNFP 84
          KTNFP
Sbjct: 80 KTNFP 84

[Close]

BLAST of Csor.00g232250 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 109.8 bits (273), Expect = 2.8e-24
Identity = 61/90 (67.78%), Postives = 68/90 (75.56%), Query Frame = 0


Query: 20  NNARELHFRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAYAYDNAARQFRGAKAK 79
           N    + +RGVRKRPWGRYAAEIRDP KKSRVWLGTFDT EEAA AYD  A +FRGAKAK
Sbjct: 13  NEGNGVRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAK 72

Query: 80  TNFPPPDELIDVSPRKISQSPSPSSTVESS 110
           TNFP  +  I+     ++QS S SSTVESS
Sbjct: 73  TNFPCYN--INAHCLSLTQSLSQSSTVESS 100

The following BLAST results are available for this feature:

BLAST of Csor.00g232250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80340	5.6e-38	48.02	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40477	1.2e-32	46.73	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9LW49	3.5e-32	47.22	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q9FE67	1.3e-31	47.40	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9MAI5	4.5e-27	41.18	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of Csor.00g232250 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589250.1	4.46e-147	100.00	Ethylene-responsive transcription factor 9, partial [Cucurbita argyrosperma subs...	[more]
KAG7022949.1	2.58e-146	99.53	Ethylene-responsive transcription factor 9, partial [Cucurbita argyrosperma subs...	[more]
XP_023531239.1	6.08e-145	98.58	ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022930838.1	6.53e-145	98.60	ethylene-responsive transcription factor 4-like [Cucurbita moschata]	[more]
XP_022989129.1	2.89e-143	98.11	ethylene-responsive transcription factor 4-like [Cucurbita maxima]	[more]

BLAST of Csor.00g232250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWM0	3.16e-145	98.60	ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1JNH6	1.40e-143	98.11	ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7SPZ4	2.14e-111	79.36	Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3C1T3	1.24e-110	78.90	LOW QUALITY PROTEIN: ethylene-responsive transcription factor 4 OS=Cucumis melo ...	[more]
A0A6J1GM68	3.17e-110	75.86	ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Csor.00g232250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	4.0e-39	48.02	ethylene responsive element binding factor 4	[more]
AT5G44210.1	9.5e-33	47.40	erf domain protein 9	[more]
AT1G53170.1	3.2e-28	41.18	ethylene response factor 8	[more]
AT1G50640.1	2.8e-24	76.92	ethylene responsive element binding factor 3	[more]
AT1G28370.1	2.8e-24	67.78	ERF domain protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 27..38 score: 60.91 coord: 49..65 score: 72.41
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 26..89 e-value: 3.6E-36 score: 136.2
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 26..75 e-value: 2.0E-14 score: 53.6
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 26..83 score: 23.050652
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 26..83 e-value: 5.47373E-31 score: 106.202
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 26..84 e-value: 2.9E-27 score: 96.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..120
None	No IPR available	PANTHER	PTHR31677:SF113	ERF DOMAIN PROTEIN 9-RELATED	coord: 10..136
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 10..136
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 26..83

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g232250.m01	Csor.00g232250.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity