Csor.00g229630 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAATCAGACTACCTTCACTTCTCCTCAGTGCCAAGCAAATTGTCAAAATGCCGACTGTTTCGTCTAGAAATCAATGTGCCGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCATCCGTCTTTTTCAGCTTTGCTCAAGGCTGCCGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGATTGACAATTCCTTGCAGAGAAGAGGTGTTCATCAATCTCACATCCAGTCTGCAAACTTCCTGA ATGGGAATCAGACTACCTTCACTTCTCCTCAGTGCCAAGCAAATTGTCAAAATGCCGACTGTTTCGTCTAGAAATCAATGTGCCGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCATCCGTCTTTTTCAGCTTTGCTCAAGGCTGCCGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGATTGACAATTCCTTGCAGAGAAGAGGTGTTCATCAATCTCACATCCAGTCTGCAAACTTCCTGA ATGGGAATCAGACTACCTTCACTTCTCCTCAGTGCCAAGCAAATTGTCAAAATGCCGACTGTTTCGTCTAGAAATCAATGTGCCGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATCGAAAGGAAGCGGTTTGTGGTTCCAATATCATACTTGAACCATCCGTCTTTTTCAGCTTTGCTCAAGGCTGCCGAAGAAGAATTTGGATTTAAACATCCAACTGGAGGATTGACAATTCCTTGCAGAGAAGAGGTGTTCATCAATCTCACATCCAGTCTGCAAACTTCCTGA MGIRLPSLLLSAKQIVKMPTVSSRNQCAVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKAAEEEFGFKHPTGGLTIPCREEVFINLTSSLQTS Homology
BLAST of Csor.00g229630 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 4.0e-23 Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 108.2 bits (269), Expect = 5.2e-23 Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 6.8e-23 Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 6.8e-23 Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy Swiss-Prot
Match: Q9FJG1 (Auxin-responsive protein SAUR19 OS=Arabidopsis thaliana OX=3702 GN=SAUR19 PE=2 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 1.2e-22 Identity = 51/87 (58.62%), Postives = 65/87 (74.71%), Query Frame = 0
BLAST of Csor.00g229630 vs. NCBI nr
Match: KAG6571053.1 (Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193 bits (491), Expect = 4.53e-62 Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0
BLAST of Csor.00g229630 vs. NCBI nr
Match: XP_022944372.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata]) HSP 1 Score: 186 bits (472), Expect = 3.59e-59 Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Csor.00g229630 vs. NCBI nr
Match: KAG6571049.1 (Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 181 bits (459), Expect = 3.46e-57 Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g229630 vs. NCBI nr
Match: XP_022986729.1 (auxin-responsive protein SAUR21-like [Cucurbita maxima]) HSP 1 Score: 181 bits (458), Expect = 4.91e-57 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g229630 vs. NCBI nr
Match: XP_022944352.1 (auxin-responsive protein SAUR21-like [Cucurbita moschata]) HSP 1 Score: 181 bits (459), Expect = 1.19e-56 Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy TrEMBL
Match: A0A6J1FVI6 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111448837 PE=3 SV=1) HSP 1 Score: 186 bits (472), Expect = 1.74e-59 Identity = 93/97 (95.88%), Postives = 94/97 (96.91%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy TrEMBL
Match: A0A6J1JGW3 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484395 PE=3 SV=1) HSP 1 Score: 181 bits (458), Expect = 2.38e-57 Identity = 89/97 (91.75%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy TrEMBL
Match: A0A6J1FVH4 (auxin-responsive protein SAUR21-like OS=Cucurbita moschata OX=3662 GN=LOC111448819 PE=3 SV=1) HSP 1 Score: 181 bits (459), Expect = 5.78e-57 Identity = 90/97 (92.78%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy TrEMBL
Match: A0A0A0LM71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258780 PE=3 SV=1) HSP 1 Score: 177 bits (450), Expect = 3.95e-56 Identity = 87/97 (89.69%), Postives = 92/97 (94.85%), Query Frame = 0
BLAST of Csor.00g229630 vs. ExPASy TrEMBL
Match: A0A5D3BMR1 (Auxin-responsive protein SAUR21-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001790 PE=3 SV=1) HSP 1 Score: 176 bits (446), Expect = 1.61e-55 Identity = 86/97 (88.66%), Postives = 91/97 (93.81%), Query Frame = 0
BLAST of Csor.00g229630 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 118.6 bits (296), Expect = 2.7e-27 Identity = 57/98 (58.16%), Postives = 77/98 (78.57%), Query Frame = 0
BLAST of Csor.00g229630 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 115.2 bits (287), Expect = 3.0e-26 Identity = 57/102 (55.88%), Postives = 77/102 (75.49%), Query Frame = 0
BLAST of Csor.00g229630 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 114.0 bits (284), Expect = 6.7e-26 Identity = 56/96 (58.33%), Postives = 72/96 (75.00%), Query Frame = 0
BLAST of Csor.00g229630 vs. TAIR 10
Match: AT4G34800.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 110.9 bits (276), Expect = 5.7e-25 Identity = 58/95 (61.05%), Postives = 68/95 (71.58%), Query Frame = 0
BLAST of Csor.00g229630 vs. TAIR 10
Match: AT5G18020.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 108.6 bits (270), Expect = 2.8e-24 Identity = 52/87 (59.77%), Postives = 65/87 (74.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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