Csor.00g229610 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGATTCGTTTGCCATCATCCCTGCTGCCTGCTGCCAAGCAAATTCTCAAGATGCAGTTGGGTTTTGTCAAGAAGCAGTCTGATGTTGTTCCTAGAGGTCATGTTGCTGTATATGTGGGAGATACCCAAAGGAAGCGATTTGTGGTTCCTGTTTCGTACTTGAACCATCCTTCATTCCAACAACTACTAAACCGAGTAGAAGAAGAGTTTGGTTACCATCATCCACATGGAGGTCTAACAATTCCTTGCAAAGAGGGTGCATTCATCGATCTTACTTCTAGACTGCAACACTCTTGA ATGGGGATTCGTTTGCCATCATCCCTGCTGCCTGCTGCCAAGCAAATTCTCAAGATGCAGTTGGGTTTTGTCAAGAAGCAGTCTGATGTTGTTCCTAGAGGTCATGTTGCTGTATATGTGGGAGATACCCAAAGGAAGCGATTTGTGGTTCCTGTTTCGTACTTGAACCATCCTTCATTCCAACAACTACTAAACCGAGTAGAAGAAGAGTTTGGTTACCATCATCCACATGGAGGTCTAACAATTCCTTGCAAAGAGGGTGCATTCATCGATCTTACTTCTAGACTGCAACACTCTTGA ATGGGGATTCGTTTGCCATCATCCCTGCTGCCTGCTGCCAAGCAAATTCTCAAGATGCAGTTGGGTTTTGTCAAGAAGCAGTCTGATGTTGTTCCTAGAGGTCATGTTGCTGTATATGTGGGAGATACCCAAAGGAAGCGATTTGTGGTTCCTGTTTCGTACTTGAACCATCCTTCATTCCAACAACTACTAAACCGAGTAGAAGAAGAGTTTGGTTACCATCATCCACATGGAGGTCTAACAATTCCTTGCAAAGAGGGTGCATTCATCGATCTTACTTCTAGACTGCAACACTCTTGA MGIRLPSSLLPAAKQILKMQLGFVKKQSDVVPRGHVAVYVGDTQRKRFVVPVSYLNHPSFQQLLNRVEEEFGYHHPHGGLTIPCKEGAFIDLTSRLQHS Homology
BLAST of Csor.00g229610 vs. ExPASy Swiss-Prot
Match: Q9FK62 (Auxin-responsive protein SAUR24 OS=Arabidopsis thaliana OX=3702 GN=SAUR24 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 2.0e-22 Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy Swiss-Prot
Match: Q9FJG0 (Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana OX=3702 GN=SAUR20 PE=1 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.2e-21 Identity = 43/70 (61.43%), Postives = 57/70 (81.43%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy Swiss-Prot
Match: Q9FJF7 (Auxin-responsive protein SAUR22 OS=Arabidopsis thaliana OX=3702 GN=SAUR22 PE=2 SV=1) HSP 1 Score: 102.8 bits (255), Expect = 2.2e-21 Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy Swiss-Prot
Match: Q9FJF9 (Auxin-responsive protein SAUR21 OS=Arabidopsis thaliana OX=3702 GN=SAUR21 PE=2 SV=1) HSP 1 Score: 102.1 bits (253), Expect = 3.8e-21 Identity = 48/88 (54.55%), Postives = 65/88 (73.86%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 5.0e-21 Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 0
BLAST of Csor.00g229610 vs. NCBI nr
Match: KAG6571055.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 204 bits (518), Expect = 3.98e-66 Identity = 99/99 (100.00%), Postives = 99/99 (100.00%), Query Frame = 0
BLAST of Csor.00g229610 vs. NCBI nr
Match: XP_022944357.1 (auxin-responsive protein SAUR24-like [Cucurbita moschata]) HSP 1 Score: 198 bits (503), Expect = 7.74e-64 Identity = 97/99 (97.98%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of Csor.00g229610 vs. NCBI nr
Match: KAG6571047.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 196 bits (499), Expect = 3.16e-63 Identity = 94/99 (94.95%), Postives = 96/99 (96.97%), Query Frame = 0
BLAST of Csor.00g229610 vs. NCBI nr
Match: XP_023512607.1 (auxin-responsive protein SAUR24-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 196 bits (497), Expect = 6.37e-63 Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of Csor.00g229610 vs. NCBI nr
Match: KAG6571051.1 (Auxin-responsive protein SAUR24, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 193 bits (490), Expect = 7.22e-62 Identity = 96/99 (96.97%), Postives = 96/99 (96.97%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy TrEMBL
Match: A0A6J1FVH8 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448821 PE=3 SV=1) HSP 1 Score: 198 bits (503), Expect = 3.75e-64 Identity = 97/99 (97.98%), Postives = 97/99 (97.98%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy TrEMBL
Match: A0A6J1JFS6 (auxin-responsive protein SAUR21-like OS=Cucurbita maxima OX=3661 GN=LOC111484006 PE=3 SV=1) HSP 1 Score: 192 bits (489), Expect = 5.13e-62 Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy TrEMBL
Match: A0A6J1JC24 (auxin-responsive protein SAUR24-like OS=Cucurbita maxima OX=3661 GN=LOC111484391 PE=3 SV=1) HSP 1 Score: 189 bits (479), Expect = 1.67e-60 Identity = 94/99 (94.95%), Postives = 95/99 (95.96%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy TrEMBL
Match: A0A6J1FXZ4 (auxin-responsive protein SAUR24-like OS=Cucurbita moschata OX=3662 GN=LOC111448822 PE=3 SV=1) HSP 1 Score: 188 bits (478), Expect = 2.44e-60 Identity = 93/99 (93.94%), Postives = 93/99 (93.94%), Query Frame = 0
BLAST of Csor.00g229610 vs. ExPASy TrEMBL
Match: A0A6J1CX72 (auxin-responsive protein SAUR24-like OS=Momordica charantia OX=3673 GN=LOC111015409 PE=3 SV=1) HSP 1 Score: 184 bits (468), Expect = 8.73e-59 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 0
BLAST of Csor.00g229610 vs. TAIR 10
Match: AT4G34810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 107.8 bits (268), Expect = 4.9e-24 Identity = 55/95 (57.89%), Postives = 70/95 (73.68%), Query Frame = 0
BLAST of Csor.00g229610 vs. TAIR 10
Match: AT2G21210.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 106.7 bits (265), Expect = 1.1e-23 Identity = 55/100 (55.00%), Postives = 72/100 (72.00%), Query Frame = 0
BLAST of Csor.00g229610 vs. TAIR 10
Match: AT4G38840.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23 Identity = 56/98 (57.14%), Postives = 68/98 (69.39%), Query Frame = 0
BLAST of Csor.00g229610 vs. TAIR 10
Match: AT5G18080.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23 Identity = 51/88 (57.95%), Postives = 64/88 (72.73%), Query Frame = 0
BLAST of Csor.00g229610 vs. TAIR 10
Match: AT4G34790.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 103.6 bits (257), Expect = 9.3e-23 Identity = 54/104 (51.92%), Postives = 68/104 (65.38%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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