Csor.00g229490 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g229490
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Csor_Chr20: 3879170 .. 3880600 (+)
RNA-Seq Expression	Csor.00g229490
Synteny	Csor.00g229490

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAGCCCTCACCATTTTCATATTAGACGGAGTCTCGATTCCTTCGCCAGTTTTTTGCGCCATGCTTCCCAAATCCAAAATCTCAAAGCCATTAAGAAGCTTCACGCCCAACTGCTTAGAACTCACTTCCAATTTTCCTCCCCGGATCTTCACTCTAAGCTTATACTATCCTACTCCCAAATCATCCCCAATTTTGATGCGCTAAGCTTAAGCAGCTTCTTCAAATGCATAATCCCCAGAAGTTCTTTAACCTTCAACGTAATGATTTCTGACTTTTATCGACATGGGTTTCCAGATTTTTCGTTAATGGCGTTGTCTTTCATGCATTCCAATGGGGTCCCTATCGATACGTATGCCCTCTGCAGCTCTTTGAGTGCTTGTTCTCTTGTTCAGAATCCCGTGTATGGAAAACAGATGCACGCCTTCGTGGGGAAATCAGGTTGGTTATGTAGTGTTTTTGTGGGGAGTGCGATTGTCGATATGTATGCAAAAAATTCGCTGATTAATGATGCAGTGAAAGTGTTTGATGAAATTCCTGTGAAGAATACGGTGTGCGCAAATGCATTATTGGCTGGATATGGCGACGCTAGCATGTGGATTGATGGACTTGAATTGCTACGGAAGATGTACGTTTTGGATTTGAAGTATGACCAGTTCACTCTATCAGCTTCTTTACGTGCGTGCACTGGTTTATCTGCAATTGCTTTAGGTAAGCAAGTGCATGCTTATCTACTACGAACGGTTTATGATATTTCGAGTGATGTTCATCTACAAAGCACATTGATTGAAATGTATGGGAAGAGTGGCATGGTGGAAAAAGCATGGAATGTGTTTGTTTTCGCAGGACTTGGACAAAAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGCATATGGTAGAAACGGATGTTACATAAGAGTAATTGAATTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTGATATCAGCTTGTGGTCACACTGGTCAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGTTTTTGGGTTGGAACCTGGTCAAGAGCACTATAGTTGTTTGGTTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAAGCATGGAAGCTTGTAAGTGGTATGAAAAGTAGCGATTACAATGTACCTCTATGGGGTGCTTTACTCCGAGCTTGCTTGGAACATGGAAATATTAAGTTGGGTAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTACGAACGCTGGGATATTCGTTATGCTATCAAATCTGTATTCTGGTTTTGGCTTGTGGAATGAGATAGAGCATTTGAGGGAATTTGTGAGAAGGGAAGGGCTGCATAAAGGTGTTGGATGTAGCTGGATAGAGACCACAAGTTGA

mRNA sequence

ATGTCGAGCCCTCACCATTTTCATATTAGACGGAGTCTCGATTCCTTCGCCAGTTTTTTGCGCCATGCTTCCCAAATCCAAAATCTCAAAGCCATTAAGAAGCTTCACGCCCAACTGCTTAGAACTCACTTCCAATTTTCCTCCCCGGATCTTCACTCTAAGCTTATACTATCCTACTCCCAAATCATCCCCAATTTTGATGCGCTAAGCTTAAGCAGCTTCTTCAAATGCATAATCCCCAGAAGTTCTTTAACCTTCAACGTAATGATTTCTGACTTTTATCGACATGGGTTTCCAGATTTTTCGTTAATGGCGTTGTCTTTCATGCATTCCAATGGGGTCCCTATCGATACGTATGCCCTCTGCAGCTCTTTGAGTGCTTGTTCTCTTGTTCAGAATCCCGTGTATGGAAAACAGATGCACGCCTTCGTGGGGAAATCAGGTTGGTTATGTAGTGTTTTTGTGGGGAGTGCGATTGTCGATATGTATGCAAAAAATTCGCTGATTAATGATGCAGTGAAAGTGTTTGATGAAATTCCTGTGAAGAATACGGTGTGCGCAAATGCATTATTGGCTGGATATGGCGACGCTAGCATGTGGATTGATGGACTTGAATTGCTACGGAAGATGTACGTTTTGGATTTGAAGTATGACCAGTTCACTCTATCAGCTTCTTTACGTGCGTGCACTGGTTTATCTGCAATTGCTTTAGGTAAGCAAGTGCATGCTTATCTACTACGAACGGTTTATGATATTTCGAGTGATGTTCATCTACAAAGCACATTGATTGAAATGTATGGGAAGAGTGGCATGGTGGAAAAAGCATGGAATGTGTTTGTTTTCGCAGGACTTGGACAAAAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGCATATGGTAGAAACGGATGTTACATAAGAGTAATTGAATTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTGATATCAGCTTGTGGTCACACTGGTCAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGTTTTTGGGTTGGAACCTGGTCAAGAGCACTATAGTTGTTTGGTTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAAGCATGGAAGCTTGTAAGTGGTATGAAAAGTAGCGATTACAATGTACCTCTATGGGGTGCTTTACTCCGAGCTTGCTTGGAACATGGAAATATTAAGTTGGGTAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTACGAACGCTGGGATATTCGTTATGCTATCAAATCTGTATTCTGGTTTTGGCTTGTGGAATGAGATAGAGCATTTGAGGGAATTTGTGAGAAGGGAAGGGCTGCATAAAGGTGTTGGATGTAGCTGGATAGAGACCACAAGTTGA

Coding sequence (CDS)

ATGTCGAGCCCTCACCATTTTCATATTAGACGGAGTCTCGATTCCTTCGCCAGTTTTTTGCGCCATGCTTCCCAAATCCAAAATCTCAAAGCCATTAAGAAGCTTCACGCCCAACTGCTTAGAACTCACTTCCAATTTTCCTCCCCGGATCTTCACTCTAAGCTTATACTATCCTACTCCCAAATCATCCCCAATTTTGATGCGCTAAGCTTAAGCAGCTTCTTCAAATGCATAATCCCCAGAAGTTCTTTAACCTTCAACGTAATGATTTCTGACTTTTATCGACATGGGTTTCCAGATTTTTCGTTAATGGCGTTGTCTTTCATGCATTCCAATGGGGTCCCTATCGATACGTATGCCCTCTGCAGCTCTTTGAGTGCTTGTTCTCTTGTTCAGAATCCCGTGTATGGAAAACAGATGCACGCCTTCGTGGGGAAATCAGGTTGGTTATGTAGTGTTTTTGTGGGGAGTGCGATTGTCGATATGTATGCAAAAAATTCGCTGATTAATGATGCAGTGAAAGTGTTTGATGAAATTCCTGTGAAGAATACGGTGTGCGCAAATGCATTATTGGCTGGATATGGCGACGCTAGCATGTGGATTGATGGACTTGAATTGCTACGGAAGATGTACGTTTTGGATTTGAAGTATGACCAGTTCACTCTATCAGCTTCTTTACGTGCGTGCACTGGTTTATCTGCAATTGCTTTAGGTAAGCAAGTGCATGCTTATCTACTACGAACGGTTTATGATATTTCGAGTGATGTTCATCTACAAAGCACATTGATTGAAATGTATGGGAAGAGTGGCATGGTGGAAAAAGCATGGAATGTGTTTGTTTTCGCAGGACTTGGACAAAAAGAAGATGGGAAAAGGGATATTATAATGTGGACTTCTATGCTTAGTGCATATGGTAGAAACGGATGTTACATAAGAGTAATTGAATTGTACAACCAGATGTTGATGGAAGGGATCAAACCAGATAGGGTGGCTTTTGTGACAGTGATATCAGCTTGTGGTCACACTGGTCAGGTGAATCTTGGAGTCAAGTATTTTGACTCCATGCAGAGTGTTTTTGGGTTGGAACCTGGTCAAGAGCACTATAGTTGTTTGGTTGACTTGCTCTGTAGAGCTGGGGAATTGGAAAAAGCATGGAAGCTTGTAAGTGGTATGAAAAGTAGCGATTACAATGTACCTCTATGGGGTGCTTTACTCCGAGCTTGCTTGGAACATGGAAATATTAAGTTGGGTAATTTGGCAGCTCGTAGGGCACTTGAATTGGATCCTACGAACGCTGGGATATTCGTTATGCTATCAAATCTGTATTCTGGTTTTGGCTTGTGGAATGAGATAGAGCATTTGAGGGAATTTGTGAGAAGGGAAGGGCTGCATAAAGGTGTTGGATGTAGCTGGATAGAGACCACAAGTTGA

Protein sequence

MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS

Homology

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BLAST of Csor.00g229490 vs. ExPASy Swiss-Prot
Match: Q9SX45 (Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E42 PE=2 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.4e-65
Identity = 154/454 (33.92%), Postives = 251/454 (55.29%), Query Frame = 0


Query: 29  LKAIKKL--------HAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALSLSSFFKCIIP 88
           LKA+ KL        HA +++     S P + + LI  YS     FD    S  F     
Sbjct: 111 LKAVFKLRDSNPFQFHAHIVKFGLD-SDPFVRNSLISGYSS-SGLFD--FASRLFDGAED 170

Query: 89  RSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSLVQNPVYGKQM 148
           +  +T+  MI  F R+G    +++    M   GV  +   + S L A   V++  +G+ +
Sbjct: 171 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 230

Query: 149 HAFVGKSGWL-CSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASM 208
           H    ++G + C VF+GS++VDMY K S  +DA KVFDE+P +N V   AL+AGY  +  
Sbjct: 231 HGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 290

Query: 209 WIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISSDVHLQ 268
           +  G+ +  +M   D+  ++ TLS+ L AC  + A+  G++VH Y+++   +I++     
Sbjct: 291 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA--G 350

Query: 269 STLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVIELYNQ 328
           +TLI++Y K G +E+A  + VF  L +K     ++  WT+M++ +  +G      +L+  
Sbjct: 351 TTLIDLYVKCGCLEEA--ILVFERLHEK-----NVYTWTAMINGFAAHGYARDAFDLFYT 410

Query: 329 MLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDLLCRAG 388
           ML   + P+ V F+ V+SAC H G V  G + F SM+  F +EP  +HY+C+VDL  R G
Sbjct: 411 MLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKG 470

Query: 389 ELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPTNAGIFVMLS 448
            LE+A  L+  M     NV +WGAL  +CL H + +LG  AA R ++L P+++G + +L+
Sbjct: 471 LLEEAKALIERMPMEPTNV-VWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLA 530

Query: 449 NLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIE 474
           NLYS    W+E+  +R+ ++ + + K  G SWIE
Sbjct: 531 NLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550

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BLAST of Csor.00g229490 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 1.9e-65
Identity = 130/409 (31.78%), Postives = 230/409 (56.23%), Query Frame = 0


Query: 67  DALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLS 126
           D  S  + F+ +  RS +++  MI+ + R G    ++     M   G+  D Y + + L+
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405

Query: 127 ACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVC 186
            C+  +    GK++H ++ ++     +FV +A++DMYAK   + +A  VF E+ VK+ + 
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465

Query: 187 ANALLAGYGDASMWIDGLELLRKMYVLDLKY--DQFTLSASLRACTGLSAIALGKQVHAY 246
            N ++ GY       + L L   + + + ++  D+ T++  L AC  LSA   G+++H Y
Sbjct: 466 WNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 525

Query: 247 LLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAY 306
           ++R  Y   SD H+ ++L++MY K G +  A  +F        +   +D++ WT M++ Y
Sbjct: 526 IMRNGY--FSDRHVANSLVDMYAKCGALLLAHMLF-------DDIASKDLVSWTVMIAGY 585

Query: 307 GRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPG 366
           G +G     I L+NQM   GI+ D ++FV+++ AC H+G V+ G ++F+ M+    +EP 
Sbjct: 586 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 645

Query: 367 QEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRA 426
            EHY+C+VD+L R G+L KA++ +  M     +  +WGALL  C  H ++KL    A + 
Sbjct: 646 VEHYACIVDMLARTGDLIKAYRFIENMPIPP-DATIWGALLCGCRIHHDVKLAEKVAEKV 705

Query: 427 LELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIE 474
            EL+P N G +V+++N+Y+    W +++ LR+ + + GL K  GCSWIE
Sbjct: 706 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743

[Close]

BLAST of Csor.00g229490 vs. ExPASy Swiss-Prot
Match: P93005 (Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E19 PE=3 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 7.1e-65
Identity = 135/393 (34.35%), Postives = 220/393 (55.98%), Query Frame = 0


Query: 81  RSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSLVQNPVYGKQM 140
           R+S+T++ M++ + ++G    ++   S M S G+    Y +   L+ACS +     GKQ+
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344

Query: 141 HAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASMW 200
           H+F+ K G+   +F  +A+VDMYAK   + DA K FD +  ++     +L++GY   S  
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404

Query: 201 IDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISSDVHLQS 260
            + L L R+M    +  +  T+++ L+AC+ L+ + LGKQVH + ++  +    +V + S
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK--HGFGLEVPIGS 464

Query: 261 TLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVIELYNQM 320
            L  MY K G +E    VF       +    +D++ W +M+S    NG     +EL+ +M
Sbjct: 465 ALSTMYSKCGSLEDGNLVF-------RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 524

Query: 321 LMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDLLCRAGE 380
           L EG++PD V FV +ISAC H G V  G  YF+ M    GL+P  +HY+C+VDLL RAG+
Sbjct: 525 LAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 584

Query: 381 LEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPTNAGIFVMLSN 440
           L++A + +    + D+ + LW  LL AC  HG  +LG  A  + + L    +  +V LS 
Sbjct: 585 LKEAKEFIES-ANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSG 644

Query: 441 LYSGFGLWNEIEHLREFVRREGLHKGVGCSWIE 474
           +Y+  G   ++E + + +R  G+ K VGCSWIE
Sbjct: 645 IYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667

[Close]

BLAST of Csor.00g229490 vs. ExPASy Swiss-Prot
Match: Q9SIT7 (Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX=3702 GN=PCMP-E76 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-64
Identity = 157/495 (31.72%), Postives = 263/495 (53.13%), Query Frame = 0


Query: 15  SFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALSLSSF 74
           SFAS L   S + ++    ++H+ + ++ F  S   + S L+  YS+     DA      
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPF-LSDVYIGSALVDMYSKCGNVNDA---QRV 213

Query: 75  FKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSLVQNP 134
           F  +  R+ +++N +I+ F ++G    +L     M  + V  D   L S +SAC+ +   
Sbjct: 214 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 273

Query: 135 VYGKQMHAFVGKSGWLCS-VFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAG 194
             G+++H  V K+  L + + + +A VDMYAK S I +A  +FD +P++N +   ++++G
Sbjct: 274 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 333

Query: 195 YGDASMWIDGLELLRKM--------YVLDLKYDQ-----------------------FTL 254
           Y  A+       +  KM          L   Y Q                       ++ 
Sbjct: 334 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 393

Query: 255 SASLRACTGLSAIALGKQVHAYLLRTVYDISS----DVHLQSTLIEMYGKSGMVEKAWNV 314
           +  L+AC  L+ + LG Q H ++L+  +   S    D+ + ++LI+MY K G VE+ + V
Sbjct: 394 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 453

Query: 315 FVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISA 374
           F       ++  +RD + W +M+  + +NG     +EL+ +ML  G KPD +  + V+SA
Sbjct: 454 F-------RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 513

Query: 375 CGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNV 434
           CGH G V  G  YF SM   FG+ P ++HY+C+VDLL RAG LE+A  ++  M     +V
Sbjct: 514 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 573

Query: 435 PLWGALLRACLEHGNIKLGNLAARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFV 474
            +WG+LL AC  H NI LG   A + LE++P+N+G +V+LSN+Y+  G W ++ ++R+ +
Sbjct: 574 -IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 633

[Close]

BLAST of Csor.00g229490 vs. ExPASy Swiss-Prot
Match: Q9LW63 (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.9e-64
Identity = 129/404 (31.93%), Postives = 226/404 (55.94%), Query Frame = 0


Query: 70  SLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACS 129
           S+   F+ +  +  +++N +I+ + + G  + +L  +  M +  +  D++ L S L   S
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253

Query: 130 LVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANA 189
              + + GK++H +V + G    V++GS++VDMYAK++ I D+ +VF  +  ++ +  N+
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313

Query: 190 LLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTV 249
           L+AGY     + + L L R+M    +K      S+ + AC  L+ + LGKQ+H Y+LR  
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373

Query: 250 YDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGC 309
           +   S++ + S L++MY K G ++ A  +F             D + WT+++  +  +G 
Sbjct: 374 F--GSNIFIASALVDMYSKCGNIKAARKIF-------DRMNVLDEVSWTAIIMGHALHGH 433

Query: 310 YIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYS 369
               + L+ +M  +G+KP++VAFV V++AC H G V+    YF+SM  V+GL    EHY+
Sbjct: 434 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 493

Query: 370 CLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDP 429
            + DLL RAG+LE+A+  +S M   +    +W  LL +C  H N++L    A +   +D 
Sbjct: 494 AVADLLGRAGKLEEAYNFISKM-CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDS 553

Query: 430 TNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIE 474
            N G +V++ N+Y+  G W E+  LR  +R++GL K   CSWIE
Sbjct: 554 ENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587

[Close]

BLAST of Csor.00g229490 vs. NCBI nr
Match: KAG6571067.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 962 bits (2486), Expect = 0.0
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0


Query: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60
           MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS
Sbjct: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60

Query: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120
           QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA
Sbjct: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120

Query: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180
           LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP
Sbjct: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180

Query: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240
           VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ
Sbjct: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240

Query: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300
           VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM
Sbjct: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300

Query: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360
           LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG
Sbjct: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360

Query: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420
           LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA
Sbjct: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420

Query: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS
Sbjct: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of Csor.00g229490 vs. NCBI nr
Match: XP_022944055.1 (pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata] >KAG7010880.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 959 bits (2479), Expect = 0.0
Identity = 475/476 (99.79%), Postives = 475/476 (99.79%), Query Frame = 0


Query: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60
           MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS
Sbjct: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60

Query: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120
           QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA
Sbjct: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120

Query: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180
           LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP
Sbjct: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180

Query: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240
           VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ
Sbjct: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240

Query: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300
           VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM
Sbjct: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300

Query: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360
           LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG
Sbjct: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360

Query: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420
           LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA
Sbjct: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420

Query: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLR FVRREGLHKGVGCSWIETTS
Sbjct: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLRGFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of Csor.00g229490 vs. NCBI nr
Match: XP_023512242.1 (pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 926 bits (2394), Expect = 0.0
Identity = 457/476 (96.01%), Postives = 469/476 (98.53%), Query Frame = 0


Query: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60
           MS+ HHFHIRRSLDSFASFLRH+SQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS
Sbjct: 14  MSNLHHFHIRRSLDSFASFLRHSSQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 73

Query: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120
           QI+PNFDA SLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSL+ALSFMHSNGVPIDTYA
Sbjct: 74  QIVPNFDAQSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLIALSFMHSNGVPIDTYA 133

Query: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180
           LCSSLSACSLVQN VYG+QMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP
Sbjct: 134 LCSSLSACSLVQNAVYGQQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 193

Query: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240
           VKNTVCANALLAGYGDA MWIDGLELLRKM+VL+LKYDQFTLSASLRACTGLSAIALGKQ
Sbjct: 194 VKNTVCANALLAGYGDAGMWIDGLELLRKMHVLNLKYDQFTLSASLRACTGLSAIALGKQ 253

Query: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300
           VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLG KEDGKRDIIMWTSM
Sbjct: 254 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGHKEDGKRDIIMWTSM 313

Query: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360
           LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG
Sbjct: 314 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 373

Query: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420
           LEPGQEHYSCLVDLLCRAGEL+KAWKLVS +KSSD+NVPLWGALLRACLEHGNIKLGNLA
Sbjct: 374 LEPGQEHYSCLVDLLCRAGELDKAWKLVSDIKSSDHNVPLWGALLRACLEHGNIKLGNLA 433

Query: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           AR ALELDPTNAGIFVMLSNLY+GFGLWNEIEHLREFVRREGL+KGVGCSWIETTS
Sbjct: 434 ARMALELDPTNAGIFVMLSNLYAGFGLWNEIEHLREFVRREGLYKGVGCSWIETTS 489

[Close]

BLAST of Csor.00g229490 vs. NCBI nr
Match: XP_038901137.1 (pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901138.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901139.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901140.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901141.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida] >XP_038901143.1 pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 845 bits (2184), Expect = 1.59e-307
Identity = 417/476 (87.61%), Postives = 442/476 (92.86%), Query Frame = 0


Query: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60
           MSSPHHF+IRRSLDSFASF RH+ Q +NLKAIK++HA LLRT FQF SP+LHSKLILSYS
Sbjct: 1   MSSPHHFYIRRSLDSFASFFRHSCQSKNLKAIKRIHAHLLRTRFQFFSPNLHSKLILSYS 60

Query: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120
           QI PNFDA SL+S FKCIIPR SL FNV+ISDF RHGFPDF+LMA SFMHSNGVPIDTYA
Sbjct: 61  QINPNFDAQSLNSIFKCIIPRRSLNFNVIISDFSRHGFPDFALMAFSFMHSNGVPIDTYA 120

Query: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180
           LCSSL++CSLVQN VYGKQ+HAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAV+VFDEIP
Sbjct: 121 LCSSLTSCSLVQNGVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVEVFDEIP 180

Query: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240
           +KNTVCANALLAGYG+A MW++GLELLR+M  LDLKYDQFTLSASLRAC GLSAIALGKQ
Sbjct: 181 MKNTVCANALLAGYGEARMWVEGLELLREMQALDLKYDQFTLSASLRACAGLSAIALGKQ 240

Query: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300
           VHAYLLRTVYDI+ DVHLQSTLIEMYGKSGMVEKAWNVF FAGL QKEDGKRDIIMWTSM
Sbjct: 241 VHAYLLRTVYDITCDVHLQSTLIEMYGKSGMVEKAWNVFNFAGLRQKEDGKRDIIMWTSM 300

Query: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360
           LS YGRNGCY RVIELYNQMLMEG KPDRVAFVTVISACGHTG+VNLGVKYFDSMQS FG
Sbjct: 301 LSVYGRNGCYKRVIELYNQMLMEGNKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFG 360

Query: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420
           LEPGQEHYSCLVDLLCRAGELEKAWKLV+ +KS DYNV LWGALLRACLE GNIKLGNLA
Sbjct: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVNDIKSWDYNVSLWGALLRACLEQGNIKLGNLA 420

Query: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           A RALELDP NAGIFVMLSNLY+GFGLWNEIE LREFVR+EGL+K VGCSWIE TS
Sbjct: 421 AHRALELDPQNAGIFVMLSNLYAGFGLWNEIERLREFVRKEGLYKDVGCSWIEITS 476

[Close]

BLAST of Csor.00g229490 vs. NCBI nr
Match: XP_008457622.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_008457623.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >XP_016902170.1 PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis melo] >KAA0045664.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYJ99619.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 835 bits (2156), Expect = 2.25e-303
Identity = 407/466 (87.34%), Postives = 435/466 (93.35%), Query Frame = 0


Query: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70
           RSLDSFASF  H+SQI+NLK IKK+HA LLRTHFQF SP+LHSKLILSYSQIIPNFDA S
Sbjct: 4   RSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAQS 63

Query: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130
           L+S FKCIIPR+SLTFNVMISDF RHGFPDF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123

Query: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190
           VQN VYGKQ+HAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAV+VFDE+P+KNTVCANAL
Sbjct: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183

Query: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250
           LAGYG+A MW++GLELLRKM  LDLKYDQFTLSASLRAC GLSAIALGKQ+HAY+LRTVY
Sbjct: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILRTVY 243

Query: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310
           DI+SDVHLQSTL+EMYGK+GMVEKAWNVF FAGLG +EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRNGCY 303

Query: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370
            RVIELYNQMLMEGIKPDRVAFVTVISACGHTG+VNLGVKYFDSMQS FGLEPGQEHYSC
Sbjct: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363

Query: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430
           L DLLCRAGELEKAWKLV+ +KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423

Query: 431 NAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           NAGIF+MLSNLY+GFGLWNEIEHLREFVR+EGL+K VGCSWIE TS
Sbjct: 424 NAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of Csor.00g229490 vs. ExPASy TrEMBL
Match: A0A6J1FYF9 (pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita moschata OX=3662 GN=LOC111448605 PE=4 SV=1)

HSP 1 Score: 959 bits (2479), Expect = 0.0
Identity = 475/476 (99.79%), Postives = 475/476 (99.79%), Query Frame = 0


Query: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60
           MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS
Sbjct: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60

Query: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120
           QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA
Sbjct: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120

Query: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180
           LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP
Sbjct: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180

Query: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240
           VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ
Sbjct: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240

Query: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300
           VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM
Sbjct: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300

Query: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360
           LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG
Sbjct: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360

Query: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420
           LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA
Sbjct: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420

Query: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLR FVRREGLHKGVGCSWIETTS
Sbjct: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLRGFVRREGLHKGVGCSWIETTS 476

[Close]

BLAST of Csor.00g229490 vs. ExPASy TrEMBL
Match: A0A1S3C6K8 (pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=3656 GN=LOC103497272 PE=4 SV=1)

HSP 1 Score: 835 bits (2156), Expect = 1.09e-303
Identity = 407/466 (87.34%), Postives = 435/466 (93.35%), Query Frame = 0


Query: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70
           RSLDSFASF  H+SQI+NLK IKK+HA LLRTHFQF SP+LHSKLILSYSQIIPNFDA S
Sbjct: 4   RSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAQS 63

Query: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130
           L+S FKCIIPR+SLTFNVMISDF RHGFPDF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123

Query: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190
           VQN VYGKQ+HAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAV+VFDE+P+KNTVCANAL
Sbjct: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183

Query: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250
           LAGYG+A MW++GLELLRKM  LDLKYDQFTLSASLRAC GLSAIALGKQ+HAY+LRTVY
Sbjct: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILRTVY 243

Query: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310
           DI+SDVHLQSTL+EMYGK+GMVEKAWNVF FAGLG +EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRNGCY 303

Query: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370
            RVIELYNQMLMEGIKPDRVAFVTVISACGHTG+VNLGVKYFDSMQS FGLEPGQEHYSC
Sbjct: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363

Query: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430
           L DLLCRAGELEKAWKLV+ +KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423

Query: 431 NAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           NAGIF+MLSNLY+GFGLWNEIEHLREFVR+EGL+K VGCSWIE TS
Sbjct: 424 NAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of Csor.00g229490 vs. ExPASy TrEMBL
Match: A0A5D3BKX2 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001930 PE=4 SV=1)

HSP 1 Score: 835 bits (2156), Expect = 1.09e-303
Identity = 407/466 (87.34%), Postives = 435/466 (93.35%), Query Frame = 0


Query: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70
           RSLDSFASF  H+SQI+NLK IKK+HA LLRTHFQF SP+LHSKLILSYSQIIPNFDA S
Sbjct: 4   RSLDSFASFFGHSSQIKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAQS 63

Query: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130
           L+S FKCIIPR+SLTFNVMISDF RHGFPDF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 64  LNSIFKCIIPRTSLTFNVMISDFSRHGFPDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123

Query: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190
           VQN VYGKQ+HAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAV+VFDE+P+KNTVCANAL
Sbjct: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183

Query: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250
           LAGYG+A MW++GLELLRKM  LDLKYDQFTLSASLRAC GLSAIALGKQ+HAY+LRTVY
Sbjct: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACAGLSAIALGKQLHAYILRTVY 243

Query: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310
           DI+SDVHLQSTL+EMYGK+GMVEKAWNVF FAGLG +EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFNFAGLGHREDGKRDIIMWTSMLSVYGRNGCY 303

Query: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370
            RVIELYNQMLMEGIKPDRVAFVTVISACGHTG+VNLGVKYFDSMQS FGLEPGQEHYSC
Sbjct: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVKYFDSMQSDFGLEPGQEHYSC 363

Query: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430
           L DLLCRAGELEKAWKLV+ +KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423

Query: 431 NAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           NAGIF+MLSNLY+GFGLWNEIEHLREFVR+EGL+K VGCSWIE TS
Sbjct: 424 NAGIFIMLSNLYAGFGLWNEIEHLREFVRKEGLYKDVGCSWIEITS 469

[Close]

BLAST of Csor.00g229490 vs. ExPASy TrEMBL
Match: A0A0A0LLD6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258600 PE=4 SV=1)

HSP 1 Score: 821 bits (2120), Expect = 3.32e-298
Identity = 401/466 (86.05%), Postives = 430/466 (92.27%), Query Frame = 0


Query: 11  RSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALS 70
           RSLDSFASF  H+SQ +NLK IKK+HA LLRTHFQF SP+LHSKLILSYSQIIPNFDA S
Sbjct: 4   RSLDSFASFFHHSSQFKNLKTIKKIHAHLLRTHFQFFSPNLHSKLILSYSQIIPNFDAKS 63

Query: 71  LSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSL 130
           L+  F+CIIPR+SLTFNVMISDF RHGF DF+LM  SFMHSNGVPIDTYALCSSL+ CS 
Sbjct: 64  LNGIFQCIIPRTSLTFNVMISDFSRHGFQDFALMGFSFMHSNGVPIDTYALCSSLNGCSF 123

Query: 131 VQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANAL 190
           VQN VYGKQ+HAFVGKSGWLCSVFVGSAIVDMYAKNSLI DAV+VFDE+P+KNTVCANAL
Sbjct: 124 VQNVVYGKQIHAFVGKSGWLCSVFVGSAIVDMYAKNSLIYDAVEVFDEMPMKNTVCANAL 183

Query: 191 LAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVY 250
           LAGYG+A MW++GLELLRKM  LDLKYDQFTLSASLRACTGLSAIALGKQVHAY+LRTVY
Sbjct: 184 LAGYGEARMWVEGLELLRKMQGLDLKYDQFTLSASLRACTGLSAIALGKQVHAYILRTVY 243

Query: 251 DISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCY 310
           DI+SDVHLQSTL+EMYGK+GMVEKAWNVF FAGLG++EDGKRDIIMWTSMLS YGRNGCY
Sbjct: 244 DITSDVHLQSTLVEMYGKNGMVEKAWNVFKFAGLGRQEDGKRDIIMWTSMLSVYGRNGCY 303

Query: 311 IRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSC 370
            RVIELYNQMLMEGIKPDRVAFVTVISACGHTG+VNLGV+YFDSMQS FGLEPGQEHYSC
Sbjct: 304 KRVIELYNQMLMEGIKPDRVAFVTVISACGHTGEVNLGVQYFDSMQSDFGLEPGQEHYSC 363

Query: 371 LVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPT 430
           L DLLCRAGELEKAWKLV+ +KS DYNV LWGALLRACLE GNIKLGNLAARRALELDP 
Sbjct: 364 LADLLCRAGELEKAWKLVNDIKSRDYNVSLWGALLRACLEQGNIKLGNLAARRALELDPQ 423

Query: 431 NAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           N GI VMLSNLY+GFGLWNEIEHLRE VR+EGL+K V CSWIE TS
Sbjct: 424 NTGILVMLSNLYAGFGLWNEIEHLRESVRKEGLYKDVACSWIEITS 469

[Close]

BLAST of Csor.00g229490 vs. ExPASy TrEMBL
Match: A0A6J1CYG8 (pentatricopeptide repeat-containing protein At4g21300-like OS=Momordica charantia OX=3673 GN=LOC111015438 PE=4 SV=1)

HSP 1 Score: 789 bits (2038), Expect = 1.33e-285
Identity = 387/476 (81.30%), Postives = 428/476 (89.92%), Query Frame = 0


Query: 1   MSSPHHFHIRRSLDSFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYS 60
           MS  HHFHI++SLD F+SFLRH+++ +NL  IKKLHA L+RTHFQF SP LH+KLILSYS
Sbjct: 1   MSRSHHFHIKQSLDFFSSFLRHSTETKNLTPIKKLHAHLIRTHFQFFSPSLHTKLILSYS 60

Query: 61  QIIPNFDALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYA 120
           +  PNF A SLSS FK IIPRSSLTFN++I+DF R+G  DF+LMA SFMHSNGVPID+YA
Sbjct: 61  RANPNFGAQSLSSLFKFIIPRSSLTFNIIIADFCRNGSADFALMAFSFMHSNGVPIDSYA 120

Query: 121 LCSSLSACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIP 180
           LCS+LSACSLVQN ++GKQMHAFVGKSGWL SVFVGSAIVD+YAKN LI DAV+VFDEIP
Sbjct: 121 LCSTLSACSLVQNVMFGKQMHAFVGKSGWLSSVFVGSAIVDLYAKNGLIGDAVEVFDEIP 180

Query: 181 VKNTVCANALLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQ 240
           +KNTVCANALLAGYG+A MW++GLELLRKMYVLDLKYD FTLSASLR C  LSAIALGKQ
Sbjct: 181 MKNTVCANALLAGYGEAKMWVEGLELLRKMYVLDLKYDHFTLSASLRTCACLSAIALGKQ 240

Query: 241 VHAYLLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSM 300
           VHAYLLR +YDI SDVHLQSTLIEMYGKSGMVEKAWNVF FAGL QKEDGKRDII+WTS+
Sbjct: 241 VHAYLLRMIYDIPSDVHLQSTLIEMYGKSGMVEKAWNVFNFAGLEQKEDGKRDIIVWTSI 300

Query: 301 LSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFG 360
           LS YGRNGCY RVIELY+QMLMEGIKPDRVAFVTVISACGHTG+V+LG+KYFDSMQS FG
Sbjct: 301 LSVYGRNGCYKRVIELYSQMLMEGIKPDRVAFVTVISACGHTGEVDLGIKYFDSMQSDFG 360

Query: 361 LEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLA 420
           L+PGQEHYSCLVDLLCRAGEL+KAWKLV+ MKS   NV LWGALLRACLEHG I+LGNLA
Sbjct: 361 LQPGQEHYSCLVDLLCRAGELDKAWKLVNDMKSQHCNVSLWGALLRACLEHGKIELGNLA 420

Query: 421 ARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIETTS 476
           A++ALELDP N GIFVMLSNLY+ FGLWNEIEHLREFV +EG+ K VGCSWIE TS
Sbjct: 421 AQKALELDPQNTGIFVMLSNLYAIFGLWNEIEHLREFVSKEGMCKDVGCSWIEITS 476

[Close]

BLAST of Csor.00g229490 vs. TAIR 10
Match: AT1G50270.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 251.9 bits (642), Expect = 1.0e-66
Identity = 154/454 (33.92%), Postives = 251/454 (55.29%), Query Frame = 0


Query: 29  LKAIKKL--------HAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALSLSSFFKCIIP 88
           LKA+ KL        HA +++     S P + + LI  YS     FD    S  F     
Sbjct: 111 LKAVFKLRDSNPFQFHAHIVKFGLD-SDPFVRNSLISGYSS-SGLFD--FASRLFDGAED 170

Query: 89  RSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSLVQNPVYGKQM 148
           +  +T+  MI  F R+G    +++    M   GV  +   + S L A   V++  +G+ +
Sbjct: 171 KDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSV 230

Query: 149 HAFVGKSGWL-CSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASM 208
           H    ++G + C VF+GS++VDMY K S  +DA KVFDE+P +N V   AL+AGY  +  
Sbjct: 231 HGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRC 290

Query: 209 WIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISSDVHLQ 268
           +  G+ +  +M   D+  ++ TLS+ L AC  + A+  G++VH Y+++   +I++     
Sbjct: 291 FDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTA--G 350

Query: 269 STLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVIELYNQ 328
           +TLI++Y K G +E+A  + VF  L +K     ++  WT+M++ +  +G      +L+  
Sbjct: 351 TTLIDLYVKCGCLEEA--ILVFERLHEK-----NVYTWTAMINGFAAHGYARDAFDLFYT 410

Query: 329 MLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDLLCRAG 388
           ML   + P+ V F+ V+SAC H G V  G + F SM+  F +EP  +HY+C+VDL  R G
Sbjct: 411 MLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKG 470

Query: 389 ELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPTNAGIFVMLS 448
            LE+A  L+  M     NV +WGAL  +CL H + +LG  AA R ++L P+++G + +L+
Sbjct: 471 LLEEAKALIERMPMEPTNV-VWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLA 530

Query: 449 NLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIE 474
           NLYS    W+E+  +R+ ++ + + K  G SWIE
Sbjct: 531 NLYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550

[Close]

BLAST of Csor.00g229490 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 251.5 bits (641), Expect = 1.3e-66
Identity = 130/409 (31.78%), Postives = 230/409 (56.23%), Query Frame = 0


Query: 67  DALSLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLS 126
           D  S  + F+ +  RS +++  MI+ + R G    ++     M   G+  D Y + + L+
Sbjct: 346 DLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLN 405

Query: 127 ACSLVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVC 186
            C+  +    GK++H ++ ++     +FV +A++DMYAK   + +A  VF E+ VK+ + 
Sbjct: 406 CCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDIIS 465

Query: 187 ANALLAGYGDASMWIDGLELLRKMYVLDLKY--DQFTLSASLRACTGLSAIALGKQVHAY 246
            N ++ GY       + L L   + + + ++  D+ T++  L AC  LSA   G+++H Y
Sbjct: 466 WNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGY 525

Query: 247 LLRTVYDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAY 306
           ++R  Y   SD H+ ++L++MY K G +  A  +F        +   +D++ WT M++ Y
Sbjct: 526 IMRNGY--FSDRHVANSLVDMYAKCGALLLAHMLF-------DDIASKDLVSWTVMIAGY 585

Query: 307 GRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPG 366
           G +G     I L+NQM   GI+ D ++FV+++ AC H+G V+ G ++F+ M+    +EP 
Sbjct: 586 GMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPT 645

Query: 367 QEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRA 426
            EHY+C+VD+L R G+L KA++ +  M     +  +WGALL  C  H ++KL    A + 
Sbjct: 646 VEHYACIVDMLARTGDLIKAYRFIENMPIPP-DATIWGALLCGCRIHHDVKLAEKVAEKV 705

Query: 427 LELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIE 474
            EL+P N G +V+++N+Y+    W +++ LR+ + + GL K  GCSWIE
Sbjct: 706 FELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743

[Close]

BLAST of Csor.00g229490 vs. TAIR 10
Match: AT2G33680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 249.6 bits (636), Expect = 5.0e-66
Identity = 135/393 (34.35%), Postives = 220/393 (55.98%), Query Frame = 0


Query: 81  RSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSLVQNPVYGKQM 140
           R+S+T++ M++ + ++G    ++   S M S G+    Y +   L+ACS +     GKQ+
Sbjct: 285 RNSITWSAMVTGYSQNGESLEAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGKQL 344

Query: 141 HAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAGYGDASMW 200
           H+F+ K G+   +F  +A+VDMYAK   + DA K FD +  ++     +L++GY   S  
Sbjct: 345 HSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALWTSLISGYVQNSDN 404

Query: 201 IDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTVYDISSDVHLQS 260
            + L L R+M    +  +  T+++ L+AC+ L+ + LGKQVH + ++  +    +V + S
Sbjct: 405 EEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK--HGFGLEVPIGS 464

Query: 261 TLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVIELYNQM 320
            L  MY K G +E    VF       +    +D++ W +M+S    NG     +EL+ +M
Sbjct: 465 ALSTMYSKCGSLEDGNLVF-------RRTPNKDVVSWNAMISGLSHNGQGDEALELFEEM 524

Query: 321 LMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDLLCRAGE 380
           L EG++PD V FV +ISAC H G V  G  YF+ M    GL+P  +HY+C+VDLL RAG+
Sbjct: 525 LAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMSDQIGLDPKVDHYACMVDLLSRAGQ 584

Query: 381 LEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDPTNAGIFVMLSN 440
           L++A + +    + D+ + LW  LL AC  HG  +LG  A  + + L    +  +V LS 
Sbjct: 585 LKEAKEFIES-ANIDHGLCLWRILLSACKNHGKCELGVYAGEKLMALGSRESSTYVQLSG 644

Query: 441 LYSGFGLWNEIEHLREFVRREGLHKGVGCSWIE 474
           +Y+  G   ++E + + +R  G+ K VGCSWIE
Sbjct: 645 IYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667

[Close]

BLAST of Csor.00g229490 vs. TAIR 10
Match: AT2G13600.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 248.4 bits (633), Expect = 1.1e-65
Identity = 157/495 (31.72%), Postives = 263/495 (53.13%), Query Frame = 0


Query: 15  SFASFLRHASQIQNLKAIKKLHAQLLRTHFQFSSPDLHSKLILSYSQIIPNFDALSLSSF 74
           SFAS L   S + ++    ++H+ + ++ F  S   + S L+  YS+     DA      
Sbjct: 154 SFASVLSACSGLNDMNKGVQVHSLIAKSPF-LSDVYIGSALVDMYSKCGNVNDA---QRV 213

Query: 75  FKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACSLVQNP 134
           F  +  R+ +++N +I+ F ++G    +L     M  + V  D   L S +SAC+ +   
Sbjct: 214 FDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISACASLSAI 273

Query: 135 VYGKQMHAFVGKSGWLCS-VFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANALLAG 194
             G+++H  V K+  L + + + +A VDMYAK S I +A  +FD +P++N +   ++++G
Sbjct: 274 KVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISG 333

Query: 195 YGDASMWIDGLELLRKM--------YVLDLKYDQ-----------------------FTL 254
           Y  A+       +  KM          L   Y Q                       ++ 
Sbjct: 334 YAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSF 393

Query: 255 SASLRACTGLSAIALGKQVHAYLLRTVYDISS----DVHLQSTLIEMYGKSGMVEKAWNV 314
           +  L+AC  L+ + LG Q H ++L+  +   S    D+ + ++LI+MY K G VE+ + V
Sbjct: 394 ANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLV 453

Query: 315 FVFAGLGQKEDGKRDIIMWTSMLSAYGRNGCYIRVIELYNQMLMEGIKPDRVAFVTVISA 374
           F       ++  +RD + W +M+  + +NG     +EL+ +ML  G KPD +  + V+SA
Sbjct: 454 F-------RKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSA 513

Query: 375 CGHTGQVNLGVKYFDSMQSVFGLEPGQEHYSCLVDLLCRAGELEKAWKLVSGMKSSDYNV 434
           CGH G V  G  YF SM   FG+ P ++HY+C+VDLL RAG LE+A  ++  M     +V
Sbjct: 514 CGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSV 573

Query: 435 PLWGALLRACLEHGNIKLGNLAARRALELDPTNAGIFVMLSNLYSGFGLWNEIEHLREFV 474
            +WG+LL AC  H NI LG   A + LE++P+N+G +V+LSN+Y+  G W ++ ++R+ +
Sbjct: 574 -IWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 633

[Close]

BLAST of Csor.00g229490 vs. TAIR 10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 246.1 bits (627), Expect = 5.6e-65
Identity = 129/404 (31.93%), Postives = 226/404 (55.94%), Query Frame = 0


Query: 70  SLSSFFKCIIPRSSLTFNVMISDFYRHGFPDFSLMALSFMHSNGVPIDTYALCSSLSACS 129
           S+   F+ +  +  +++N +I+ + + G  + +L  +  M +  +  D++ L S L   S
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFS 253

Query: 130 LVQNPVYGKQMHAFVGKSGWLCSVFVGSAIVDMYAKNSLINDAVKVFDEIPVKNTVCANA 189
              + + GK++H +V + G    V++GS++VDMYAK++ I D+ +VF  +  ++ +  N+
Sbjct: 254 EYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNS 313

Query: 190 LLAGYGDASMWIDGLELLRKMYVLDLKYDQFTLSASLRACTGLSAIALGKQVHAYLLRTV 249
           L+AGY     + + L L R+M    +K      S+ + AC  L+ + LGKQ+H Y+LR  
Sbjct: 314 LVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGG 373

Query: 250 YDISSDVHLQSTLIEMYGKSGMVEKAWNVFVFAGLGQKEDGKRDIIMWTSMLSAYGRNGC 309
           +   S++ + S L++MY K G ++ A  +F             D + WT+++  +  +G 
Sbjct: 374 F--GSNIFIASALVDMYSKCGNIKAARKIF-------DRMNVLDEVSWTAIIMGHALHGH 433

Query: 310 YIRVIELYNQMLMEGIKPDRVAFVTVISACGHTGQVNLGVKYFDSMQSVFGLEPGQEHYS 369
               + L+ +M  +G+KP++VAFV V++AC H G V+    YF+SM  V+GL    EHY+
Sbjct: 434 GHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYA 493

Query: 370 CLVDLLCRAGELEKAWKLVSGMKSSDYNVPLWGALLRACLEHGNIKLGNLAARRALELDP 429
            + DLL RAG+LE+A+  +S M   +    +W  LL +C  H N++L    A +   +D 
Sbjct: 494 AVADLLGRAGKLEEAYNFISKM-CVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDS 553

Query: 430 TNAGIFVMLSNLYSGFGLWNEIEHLREFVRREGLHKGVGCSWIE 474
            N G +V++ N+Y+  G W E+  LR  +R++GL K   CSWIE
Sbjct: 554 ENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587

The following BLAST results are available for this feature:

BLAST of Csor.00g229490 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SX45	1.4e-65	33.92	Pentatricopeptide repeat-containing protein At1g50270 OS=Arabidopsis thaliana OX...	[more]
Q9SN39	1.9e-65	31.78	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
P93005	7.1e-65	34.35	Pentatricopeptide repeat-containing protein At2g33680 OS=Arabidopsis thaliana OX...	[more]
Q9SIT7	1.6e-64	31.72	Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana OX...	[more]
Q9LW63	7.9e-64	31.93	Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th...	[more]

BLAST of Csor.00g229490 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6571067.1	0.0	100.00	Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub...	[more]
XP_022944055.1	0.0	99.79	pentatricopeptide repeat-containing protein At1g50270-like [Cucurbita moschata] ...	[more]
XP_023512242.1	0.0	96.01	pentatricopeptide repeat-containing protein At2g13600-like [Cucurbita pepo subsp...	[more]
XP_038901137.1	1.59e-307	87.61	pentatricopeptide repeat-containing protein At5g04780, mitochondrial-like [Benin...	[more]
XP_008457622.1	2.25e-303	87.34	PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Cucumis m...	[more]

BLAST of Csor.00g229490 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYF9	0.0	99.79	pentatricopeptide repeat-containing protein At1g50270-like OS=Cucurbita moschata...	[more]
A0A1S3C6K8	1.09e-303	87.34	pentatricopeptide repeat-containing protein At2g13600-like OS=Cucumis melo OX=36...	[more]
A0A5D3BKX2	1.09e-303	87.34	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A0A0LLD6	3.32e-298	86.05	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G258600 PE=4 SV=1	[more]
A0A6J1CYG8	1.33e-285	81.30	pentatricopeptide repeat-containing protein At4g21300-like OS=Momordica charanti...	[more]

BLAST of Csor.00g229490 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G50270.1	1.0e-66	33.92	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G18750.1	1.3e-66	31.78	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT2G33680.1	5.0e-66	34.35	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT2G13600.1	1.1e-65	31.72	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G23330.1	5.6e-65	31.93	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 360..392 e-value: 9.4E-7 score: 28.5
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 368..395 e-value: 1.0E-5 score: 23.4 coord: 295..328 e-value: 7.2E-8 score: 30.1 coord: 331..363 e-value: 7.5E-4 score: 17.5
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 293..339 e-value: 1.8E-7 score: 31.2
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 158..180 e-value: 0.28 score: 11.5 coord: 186..210 e-value: 0.43 score: 10.9 coord: 260..279 e-value: 0.055 score: 13.7 coord: 85..114 e-value: 0.24 score: 11.7
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 293..327 score: 11.520384
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 364..398 score: 9.317163
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 138..243 e-value: 4.0E-13 score: 51.1
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 249..475 e-value: 2.6E-37 score: 130.9
None	No IPR available	PANTHER	PTHR47928	REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED	coord: 29..472
None	No IPR available	PANTHER	PTHR47928:SF115	OS02G0126500 PROTEIN	coord: 29..472

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g229490.m01	Csor.00g229490.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009451	RNA modification
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding