Csor.00g229220 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g229220
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	late embryogenesis abundant protein-like
Location	Csor_Chr20: 4079773 .. 4081202 (-)
RNA-Seq Expression	Csor.00g229220
Synteny	Csor.00g229220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATGTACGTGACGAGTTCGGCAACCCGGTCCAGCTGACGGACGAACGTGGGAACCCGGTTCAGCTGACTGACGAATTCGGCAACCCTGTCCAACTCACTGGAGTTGCCACCACTGGGTCCCAGCCGGTTGGGAACCCGGTTCAGATGAGTGAGGAATTGGGCAACCCCATGCACCCGACCGGAGTTTCCACCACTGGGTTCAGCCCCGTCGGGAACCCGGTTCAGATGAGTGAGGAATTGGGCAACCCCATGCACCCTACTGGAGTTGCCACCACTGGGTCCAAGCCCGTGTCGAGTGGCGGGGACGTTGTTGGCCGGACGCAGCCCCTTAGGGAAGGCCACGATGCCTCGCTGGCTCGTTCTAGCAGCTCCAGCTCTAGCTCGGTGAGTGAATTGTGTGTGTGTGTTGAGATTATGAATTTAGAGCTTTTACGCTCGAGTAAAAAAGAGGTACAAGGGGTATGTTAATGAACAGAGATCACGTTGGAATAGAAGTTATCCCGATGATAAGGGATATAATAGACTTAAAAGAATTGAACTCTCAAGTTAAAGCATGTTTTGTTTGGAGTAATCATGTCGGTGATCGAGTCATATCGTACTCTATAAAGTTAAAGCATGCTTTGTTTGGAGCAATCGTATCGGTGATTGAGTCATATAATGGCGATGGGTGACCAAAAATCTTTAAAAAAACTGGTTAGTGAGGATAATTTCACATAGAAGCGAGAAATAAGTAAGGTCAAAACATGCGTGAAAGAACTTGTATCGGTTTGTGATCGCTCTTTGTAACGAGGAGTAAGTAACGTGGTCATTTGGTCACGCAATGATATAGGTTAATCTCGGGTTACTATCTATGATGTAATCTTCACTCTTTGAAACGAAACGAGAAGTAAGTAACGTGATCATTTGGTCACAAGGATATAGGTAAATGTCGGGTATGATCACAAGGATATAGGTAAATGTCGGGTTACTATCTATGATGTGAAATCTTTTCACATCAAAAATCTTTCCTCGAAACGAAACGAGGAATAAGTAACGTGATCATTTAGTCCATGTCGGGTTATTAGGTGTCAAATCTATTAGACACAAATGACTTGAACTTCACCCTGCAATTATTTGCCATGAATGGTGTGTTTATGCTTTGAACTTCAAAGACGATAAGGGAATGATCATGAAGATACGATGATGTTGTGCAGTCAGAGGACGACGGGCAAGGCGGGAGGAGGAAGAAGAAGAAGGGGTTGACGCAGAAGATAAAGGAGAAGTTAACAGGAAAACACAAGGAGGCCGGGACGACGACGACGACAACGGGGGCGGGGCACCACCAGAGTACCACCGTGACATCGACGGTGGACGTCGAACACCAAGAACATGGTAAGAAGGGGGTTCTGGAGAAGATCAAAGAGAAACTTCCTGGCCACCATTAG

mRNA sequence

ATGGCGAATGTACGTGACGAGTTCGGCAACCCGGTCCAGCTGACGGACGAACGTGGGAACCCGGTTCAGCTGACTGACGAATTCGGCAACCCTGTCCAACTCACTGGAGTTGCCACCACTGGGTCCCAGCCGGTTGGGAACCCGGTTCAGATGAGTGAGGAATTGGGCAACCCCATGCACCCGACCGGAGTTTCCACCACTGGGTTCAGCCCCGTCGGGAACCCGGTTCAGATGAGTGAGGAATTGGGCAACCCCATGCACCCTACTGGAGTTGCCACCACTGGGTCCAAGCCCGTGTCGAGTGGCGGGGACGTTGTTGGCCGGACGCAGCCCCTTAGGGAAGGCCACGATGCCTCGCTGGCTCGTTCTAGCAGCTCCAGCTCTAGCTCGTCAGAGGACGACGGGCAAGGCGGGAGGAGGAAGAAGAAGAAGGGGTTGACGCAGAAGATAAAGGAGAAGTTAACAGGAAAACACAAGGAGGCCGGGACGACGACGACGACAACGGGGGCGGGGCACCACCAGAGTACCACCGTGACATCGACGGTGGACGTCGAACACCAAGAACATGGTAAGAAGGGGGTTCTGGAGAAGATCAAAGAGAAACTTCCTGGCCACCATTAG

Coding sequence (CDS)

ATGGCGAATGTACGTGACGAGTTCGGCAACCCGGTCCAGCTGACGGACGAACGTGGGAACCCGGTTCAGCTGACTGACGAATTCGGCAACCCTGTCCAACTCACTGGAGTTGCCACCACTGGGTCCCAGCCGGTTGGGAACCCGGTTCAGATGAGTGAGGAATTGGGCAACCCCATGCACCCGACCGGAGTTTCCACCACTGGGTTCAGCCCCGTCGGGAACCCGGTTCAGATGAGTGAGGAATTGGGCAACCCCATGCACCCTACTGGAGTTGCCACCACTGGGTCCAAGCCCGTGTCGAGTGGCGGGGACGTTGTTGGCCGGACGCAGCCCCTTAGGGAAGGCCACGATGCCTCGCTGGCTCGTTCTAGCAGCTCCAGCTCTAGCTCGTCAGAGGACGACGGGCAAGGCGGGAGGAGGAAGAAGAAGAAGGGGTTGACGCAGAAGATAAAGGAGAAGTTAACAGGAAAACACAAGGAGGCCGGGACGACGACGACGACAACGGGGGCGGGGCACCACCAGAGTACCACCGTGACATCGACGGTGGACGTCGAACACCAAGAACATGGTAAGAAGGGGGTTCTGGAGAAGATCAAAGAGAAACTTCCTGGCCACCATTAG

Protein sequence

MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMHPTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASLARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTSTVDVEHQEHGKKGVLEKIKEKLPGHH

Homology

[Close]

BLAST of Csor.00g229220 vs. ExPASy Swiss-Prot
Match: P21298 (Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 6.1e-29
Identity = 94/210 (44.76%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MA+++DE GNP+ LTD  GNPVQL+DEFGNP+ +TGVA++  Q   +      E      
Sbjct: 1   MADLKDERGNPIHLTDAYGNPVQLSDEFGNPMHITGVASSAPQYKDSVTGNIAEYPTEAP 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDA-- 120
           P GV+                          A TG+   ++ G     T   +E H +  
Sbjct: 61  PAGVA--------------------------AGTGAAATTAAGVTTSETTTGQEHHGSLG 120

Query: 121 -SLARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKL-TGKHKEAGTTTTTTGAGHHQST 180
             L RS SSSSSSSEDDGQGGRR  KK +  KIK+KL  GKHK+  T TT T  G   +T
Sbjct: 121 EHLRRSGSSSSSSSEDDGQGGRR--KKSIKDKIKDKLGGGKHKDEQTPTTATTTG--PTT 180

Query: 181 TVTSTVDVEHQEHGKKGVLEKIKEKLPGHH 207
           T T+T     Q H KKG+LEKIKEKLPGHH
Sbjct: 181 TTTTTGAAADQHHEKKGILEKIKEKLPGHH 180

[Close]

BLAST of Csor.00g229220 vs. ExPASy Swiss-Prot
Match: Q96261 (Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.4e-25
Identity = 94/208 (45.19%), Postives = 113/208 (54.33%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNP-VQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPM 60
           MA++RDE GNP+ LTD +GNP V LTDE GNP+ LTGV +  S P       S+   +P 
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVS--STPQHKESTTSDIAEHPT 60

Query: 61  HPTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDAS 120
              G +    +P G     +         TG  TTG +   S            E H   
Sbjct: 61  STVGETHPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGS-----------LEEH--- 120

Query: 121 LARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKL-TGKHKEAGTTTTTTGAGHHQSTTV 180
           L RS SSSSSSSEDDGQGGRR  KK + +KIKEK  +GKHK+  T  T T       TT 
Sbjct: 121 LRRSGSSSSSSSEDDGQGGRR--KKSIKEKIKEKFGSGKHKDEQTPATAT-------TTG 180

Query: 181 TSTVDVEHQEHGKKGVLEKIKEKLPGHH 207
            +T D   Q H KKG+LEKIK+KLPGHH
Sbjct: 181 PATTD---QPHEKKGILEKIKDKLPGHH 180

[Close]

BLAST of Csor.00g229220 vs. ExPASy Swiss-Prot
Match: Q07322 (Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 5.5e-22
Identity = 108/310 (34.84%), Postives = 130/310 (41.94%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQP---------------- 60
           MA++RDE GNP+QLTD+ GNPVQLTDE+GNPV +TGVATTG+                  
Sbjct: 1   MADLRDEKGNPIQLTDQHGNPVQLTDEYGNPVHITGVATTGATTGHHDHGVGGASHGGVG 60

Query: 61  ----------------------------------------------VGNPVQMSEELG-- 120
                                                          G    +    G  
Sbjct: 61  STGLGGVAGAAGLAGATAAAATHGGSHGGTGTHGVGPTGVGAAHGGTGTTTGLGTGTGTT 120

Query: 121 ---NPMHPTGVSTT---GFSPVGNPVQMSEELG--NPMHPTGVAT--------------- 180
              + M PTG+  T   G + +G     +  LG  + M PTG                  
Sbjct: 121 GQTHGMGPTGIGGTHGVGSTGIGGAHGGTGVLGQTHGMGPTGTGAAHGGLGTGQSGLGSS 180

Query: 181 ------------TGSKPVSSGGDVVGRTQPLREGHDASLARSSSSSSSSSEDDGQGGRRK 207
                       TGS P S+G        P ++         S+SSSSSSEDDGQGGRR 
Sbjct: 181 YATHGGLGTGIGTGSAPASAGSH---SHAPEKKTALGEQLHRSNSSSSSSEDDGQGGRR- 240

[Close]

BLAST of Csor.00g229220 vs. ExPASy Swiss-Prot
Match: P30287 (Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2)

HSP 1 Score: 85.1 bits (209), Expect = 1.0e-15
Identity = 82/227 (36.12%), Postives = 106/227 (46.70%), Query Frame = 0


Query: 8   FGNPVQLTDERGNPVQLTDEFGNPV---QLTGVATTGSQPVGNPVQMSEELG----NPMH 67
           +G+P    D+ GNPV   D++GNPV           G     +P   + + G       H
Sbjct: 9   YGHPYPRVDQYGNPVPPVDQYGNPVPDEPAPRDTAAGYVAPPDPAVSTGDYGLAGAEAPH 68

Query: 68  P------TGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLR- 127
           P      +G +    +P G     + + G  + P G  T   +   S   V G +  L+ 
Sbjct: 69  PHESAVMSGAAAAAVAPGGE--AYTRDGGGVVPPAGEKTFAYEGTVSAAGVTGASGQLQP 128

Query: 128 ----EGHDA------SLARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKH----- 187
               EGH           +SSSSSSSSSEDDGQGGRR KKK + +KIKEKL G H     
Sbjct: 129 TTREEGHTTLGETLRRSGKSSSSSSSSSEDDGQGGRR-KKKSIKEKIKEKLPGSHKQEEQ 188

Query: 188 KEAGTTTTTTGAGHHQSTTVTSTVDVEHQEHGKKGVLEKIKEKLPGH 206
           K+AG T    G G       T T      +H KKG++EKIKEKLPGH
Sbjct: 189 KQAGHTAPAAGTG-------TGTGTHAAGKHEKKGIVEKIKEKLPGH 225

[Close]

BLAST of Csor.00g229220 vs. ExPASy Swiss-Prot
Match: P30185 (Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.4e-14
Identity = 82/205 (40.00%), Postives = 95/205 (46.34%), Query Frame = 0


Query: 13  QLTDERGNPVQLT-DEFGNPVQLTGVAT------TGSQPVGNPVQ------MSEELGNPM 72
           Q TDE GNP+Q   DE+GNP+   G  T      TG Q  G   Q           G   
Sbjct: 11  QATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYGSGGQGYGTGGQG 70

Query: 73  HPTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDAS 132
           + TG  T GF   G      +E    +H             SGG + G            
Sbjct: 71  YGTGTGTEGFGTGGGARHHGQE---QLHK-----------ESGGGLGG-----------M 130

Query: 133 LARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVT 192
           L RS S SSSSSEDDGQGGRR  KKG+TQKIKEKL G H ++G      G G   S    
Sbjct: 131 LHRSGSGSSSSSEDDGQGGRR--KKGITQKIKEKLPGHHDQSGQAQAMGGMG---SGYDA 183

Query: 193 STVDVEHQEHGKKGVLEKIKEKLPG 205
                EH  H KKG+++KIKEKLPG
Sbjct: 191 GGYGGEH--HEKKGMMDKIKEKLPG 183

[Close]

BLAST of Csor.00g229220 vs. NCBI nr
Match: XP_022944216.1 (late embryogenesis abundant protein-like [Cucurbita moschata] >KAG6571093.1 hypothetical protein SDJN03_30008, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010910.1 hypothetical protein SDJN02_27708, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 398 bits (1023), Expect = 1.18e-139
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180
           ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206
           TVDVEHQEHGKKGVLEKIKEKLPGHH
Sbjct: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206

[Close]

BLAST of Csor.00g229220 vs. NCBI nr
Match: XP_023513012.1 (late embryogenesis abundant protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 377 bits (969), Expect = 1.95e-131
Identity = 198/206 (96.12%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEE GNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEEFGNPMH 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTGF+PVG PVQMSEELGNPMHPTGVAT  SKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGFNPVGGPVQMSEELGNPMHPTGVATAVSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180
           ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTT TT GAGHHQSTTVTS
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTMTT-GAGHHQSTTVTS 180

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206
           TVDVEH EHGKKGVLEKIKEKLPGHH
Sbjct: 181 TVDVEHHEHGKKGVLEKIKEKLPGHH 205

[Close]

BLAST of Csor.00g229220 vs. NCBI nr
Match: XP_022986610.1 (late embryogenesis abundant protein-like [Cucurbita maxima])

HSP 1 Score: 377 bits (967), Expect = 3.80e-131
Identity = 197/206 (95.63%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGS PVGNPVQMSEE GNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTG  PV NPVQM+EELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180
           ARSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTGKHKEAGTTTT  GAGHHQSTTVTS
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTT--GAGHHQSTTVTS 180

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206
           TVDVEHQEHGKKGVLEKIKEKLPGHH
Sbjct: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 204

[Close]

BLAST of Csor.00g229220 vs. NCBI nr
Match: XP_004150075.1 (embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein Csa_006233 [Cucumis sativus])

HSP 1 Score: 196 bits (497), Expect = 3.16e-60
Identity = 126/209 (60.29%), Postives = 134/209 (64.11%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVA-TTGSQPVGNPVQMSEELGNPM 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+QLTGV  TT S                +
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSN---------------L 60

Query: 61  HPTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDAS 120
           HPT  S                    +HPT V TTG          V +TQP RE HDAS
Sbjct: 61  HPTPPSN-------------------LHPTAVTTTGEN--------VAQTQPPREIHDAS 120

Query: 121 LARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTG--KHKEAGTTTTTTGAGHHQSTT 180
             RSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTG  KHKEAGTT      G H  +T
Sbjct: 121 PRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEAGTT------GEHHEST 161

Query: 181 VTSTVDVEHQEHGKKGVLEKIKEKLPGHH 206
            T+T  VEH E GKKGV+EKIKEKLPGHH
Sbjct: 181 TTTTTSVEHHEPGKKGVMEKIKEKLPGHH 161

[Close]

BLAST of Csor.00g229220 vs. NCBI nr
Match: XP_038902143.1 (embryogenic cell protein 40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 186 bits (471), Expect = 3.17e-56
Identity = 123/208 (59.13%), Postives = 133/208 (63.94%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV  T                    
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATS------------------- 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           P+ + +T  +PV                    T         GD V +TQ  RE HD S 
Sbjct: 61  PSKLDSTTTTPVSY------------------THLDVYKRQAGDDVAQTQLTREAHDGSP 120

Query: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTG--KHKEAGTTTTTTGAGHHQSTTV 180
            RSSSSSSSSSEDDGQGGRRKKK GLTQKIKEKLTG  KHKEAGTT    GA HHQSTTV
Sbjct: 121 RRSSSSSSSSSEDDGQGGRRKKK-GLTQKIKEKLTGSGKHKEAGTT----GAEHHQSTTV 165

Query: 181 TSTVDVEHQEHGKKGVLEKIKEKLPGHH 206
           T++  VEHQEHGKKGV+EKIKE+LPGHH
Sbjct: 181 TTST-VEHQEHGKKGVMEKIKERLPGHH 165

[Close]

BLAST of Csor.00g229220 vs. ExPASy TrEMBL
Match: A0A6J1FTT6 (late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448732 PE=3 SV=1)

HSP 1 Score: 398 bits (1023), Expect = 5.73e-140
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180
           ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206
           TVDVEHQEHGKKGVLEKIKEKLPGHH
Sbjct: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206

[Close]

BLAST of Csor.00g229220 vs. ExPASy TrEMBL
Match: A0A6J1JEI1 (late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484299 PE=3 SV=1)

HSP 1 Score: 377 bits (967), Expect = 1.84e-131
Identity = 197/206 (95.63%), Postives = 199/206 (96.60%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGS PVGNPVQMSEE GNPMH
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
           PTGVSTTG  PV NPVQM+EELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180
           ARSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTGKHKEAGTTTT  GAGHHQSTTVTS
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGKHKEAGTTTT--GAGHHQSTTVTS 180

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 206
           TVDVEHQEHGKKGVLEKIKEKLPGHH
Sbjct: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 204

[Close]

BLAST of Csor.00g229220 vs. ExPASy TrEMBL
Match: A0A0A0LPB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1)

HSP 1 Score: 196 bits (497), Expect = 1.53e-60
Identity = 126/209 (60.29%), Postives = 134/209 (64.11%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVA-TTGSQPVGNPVQMSEELGNPM 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+QLTGV  TT S                +
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSN---------------L 60

Query: 61  HPTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDAS 120
           HPT  S                    +HPT V TTG          V +TQP RE HDAS
Sbjct: 61  HPTPPSN-------------------LHPTAVTTTGEN--------VAQTQPPREIHDAS 120

Query: 121 LARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTG--KHKEAGTTTTTTGAGHHQSTT 180
             RSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTG  KHKEAGTT      G H  +T
Sbjct: 121 PRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEAGTT------GEHHEST 161

Query: 181 VTSTVDVEHQEHGKKGVLEKIKEKLPGHH 206
            T+T  VEH E GKKGV+EKIKEKLPGHH
Sbjct: 181 TTTTTSVEHHEPGKKGVMEKIKEKLPGHH 161

[Close]

BLAST of Csor.00g229220 vs. ExPASy TrEMBL
Match: A0A1S3CDP4 (late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700 PE=3 SV=1)

HSP 1 Score: 176 bits (445), Expect = 1.04e-52
Identity = 116/209 (55.50%), Postives = 126/209 (60.29%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+ LTGV                       
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVV---------------------- 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
             G + +   P   P  +         PT +           G+ V +TQP RE HD S 
Sbjct: 61  --GTTPSKLDPTAPPSNLG--------PTTI-----------GENVAQTQPPREAHDTSP 120

Query: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTG--KHKEAGTTTTTTGAGHHQSTTV 180
            RSSSSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTG  KHKE GT         H ST  
Sbjct: 121 RRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKEGGT---------HDSTAT 157

Query: 181 TSTV-DVEHQEHGKKGVLEKIKEKLPGHH 206
           T+TV  VEHQE GKKGV+EKIKEKLPGHH
Sbjct: 181 TTTVTSVEHQETGKKGVMEKIKEKLPGHH 157

[Close]

BLAST of Csor.00g229220 vs. ExPASy TrEMBL
Match: A0A6J1CYY9 (late embryogenesis abundant protein-like OS=Momordica charantia OX=3673 GN=LOC111015482 PE=3 SV=1)

HSP 1 Score: 150 bits (378), Expect = 1.45e-42
Identity = 110/215 (51.16%), Postives = 121/215 (56.28%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MA+VRDE GNP+QLTDERGNPV+LTDEFGNP                             
Sbjct: 1   MADVRDERGNPIQLTDERGNPVELTDEFGNP----------------------------- 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLRE---GHD 120
                                    MH TGVAT  SK  S+GGDV G+TQ L +      
Sbjct: 61  -------------------------MHLTGVATAASKLESTGGDV-GQTQLLPDPAPDQA 120

Query: 121 ASLARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTT 180
            S  RS+SSSSSSSEDDGQGGRR+KKKGLTQKIKEKLTG  K  G      G   HQ TT
Sbjct: 121 GSPRRSTSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHKGEAAPAPGC--HQYTT 158

Query: 181 V----TSTVDVE--HQEHGKKGVLEKIKEKLPGHH 206
           V    TSTVDVE  HQ+  KKGV+EKI+EKLPGHH
Sbjct: 181 VEAKTTSTVDVEPHHQDREKKGVMEKIREKLPGHH 158

[Close]

BLAST of Csor.00g229220 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA )

HSP 1 Score: 117.1 bits (292), Expect = 1.7e-26
Identity = 94/208 (45.19%), Postives = 113/208 (54.33%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNP-VQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPM 60
           MA++RDE GNP+ LTD +GNP V LTDE GNP+ LTGV +  S P       S+   +P 
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVS--STPQHKESTTSDIAEHPT 60

Query: 61  HPTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDAS 120
              G +    +P G     +         TG  TTG +   S            E H   
Sbjct: 61  STVGETHPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGS-----------LEEH--- 120

Query: 121 LARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKL-TGKHKEAGTTTTTTGAGHHQSTTV 180
           L RS SSSSSSSEDDGQGGRR  KK + +KIKEK  +GKHK+  T  T T       TT 
Sbjct: 121 LRRSGSSSSSSSEDDGQGGRR--KKSIKEKIKEKFGSGKHKDEQTPATAT-------TTG 180

Query: 181 TSTVDVEHQEHGKKGVLEKIKEKLPGHH 207
            +T D   Q H KKG+LEKIK+KLPGHH
Sbjct: 181 PATTD---QPHEKKGILEKIKDKLPGHH 180

[Close]

BLAST of Csor.00g229220 vs. TAIR 10
Match: AT5G66400.1 (Dehydrin family protein )

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-15
Identity = 82/205 (40.00%), Postives = 95/205 (46.34%), Query Frame = 0


Query: 13  QLTDERGNPVQLT-DEFGNPVQLTGVAT------TGSQPVGNPVQ------MSEELGNPM 72
           Q TDE GNP+Q   DE+GNP+   G  T      TG Q  G   Q           G   
Sbjct: 11  QATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYGSGGQGYGTGGQG 70

Query: 73  HPTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDAS 132
           + TG  T GF   G      +E    +H             SGG + G            
Sbjct: 71  YGTGTGTEGFGTGGGARHHGQE---QLHK-----------ESGGGLGG-----------M 130

Query: 133 LARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVT 192
           L RS S SSSSSEDDGQGGRR  KKG+TQKIKEKL G H ++G      G G   S    
Sbjct: 131 LHRSGSGSSSSSEDDGQGGRR--KKGITQKIKEKLPGHHDQSGQAQAMGGMG---SGYDA 183

Query: 193 STVDVEHQEHGKKGVLEKIKEKLPG 205
                EH  H KKG+++KIKEKLPG
Sbjct: 191 GGYGGEH--HEKKGMMDKIKEKLPG 183

[Close]

BLAST of Csor.00g229220 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 78.2 bits (191), Expect = 8.7e-15
Identity = 62/130 (47.69%), Postives = 76/130 (58.46%), Query Frame = 0


Query: 77  QMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASLARSSSSSSSSSEDDGQ 136
           Q  ++ GNP      ATTG+   + G   V        G    L RS SSSSSSSEDDG 
Sbjct: 15  QQLDQFGNPF----PATTGAYGTAGGAPAVAE----GGGLSGMLHRSGSSSSSSSEDDGL 74

Query: 137 GGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTSTVDVEHQEHGKKGVLE 196
           GGRR+KKKG+T+KIKEKL G H      T++ G+    +TT   T  V H+   KKG++E
Sbjct: 75  GGRRRKKKGITEKIKEKLPGHHD--SNKTSSLGS----TTTAYDTGTVHHE---KKGMME 127

Query: 197 KIKEKLPGHH 207
           KIKEKLPG H
Sbjct: 135 KIKEKLPGGH 127

[Close]

BLAST of Csor.00g229220 vs. TAIR 10
Match: AT5G66400.2 (Dehydrin family protein )

HSP 1 Score: 75.5 bits (184), Expect = 5.6e-14
Identity = 78/205 (38.05%), Postives = 92/205 (44.88%), Query Frame = 0


Query: 13  QLTDERGNPVQLT-DEFGNPVQLTGVAT------TGSQPVGNPVQ------MSEELGNPM 72
           Q TDE GNP+Q   DE+GNP+   G  T      TG Q  G   Q           G   
Sbjct: 11  QATDEYGNPIQQQYDEYGNPMGGGGYGTGGGGGATGGQGYGTGGQGYGSGGQGYGTGGQG 70

Query: 73  HPTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDAS 132
           + TG  T GF   G      +E    +H             SGG + G            
Sbjct: 71  YGTGTGTEGFGTGGGARHHGQE---QLHK-----------ESGGGLGG------------ 130

Query: 133 LARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVT 192
           +   S S SSSS DDGQGGRR  KKG+TQKIKEKL G H ++G      G G   S    
Sbjct: 131 MLHRSGSGSSSSSDDGQGGRR--KKGITQKIKEKLPGHHDQSGQAQAMGGMG---SGYDA 182

Query: 193 STVDVEHQEHGKKGVLEKIKEKLPG 205
                EH  H KKG+++KIKEKLPG
Sbjct: 191 GGYGGEH--HEKKGMMDKIKEKLPG 182

[Close]

BLAST of Csor.00g229220 vs. TAIR 10
Match: AT4G39130.1 (Dehydrin family protein )

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 72/206 (34.95%), Postives = 95/206 (46.12%), Query Frame = 0


Query: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60
           MA+++DE GNP+ LTD  G P QL DEFGN + LTGVATT                   H
Sbjct: 1   MADLKDERGNPIYLTDAHGEPAQLMDEFGNAMHLTGVATT-----------------VPH 60

Query: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120
               S TG  P+  PV  +     P H        ++P+S   D      PL++ HD   
Sbjct: 61  LKESSYTGPHPITAPVTTT---NTPHH--------AQPISVSHD------PLQD-HDLRW 120

Query: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLTGKHKEAGTTTTTTGAGHHQSTTVTS 180
                  +SS+E++G+G  R  K  +T + K KL G  K +  T T +G+G         
Sbjct: 121 -----FGTSSTEENGEGVGR--KTNITDETKSKL-GVDKPSAATVTGSGSG--------- 148

Query: 181 TVDVEHQEHGKKGVLEKIKEKLPGHH 207
                   H KKG  +KIKEKL GHH
Sbjct: 181 ------SVHEKKGFFKKIKEKLSGHH 148

The following BLAST results are available for this feature:

BLAST of Csor.00g229220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P21298	6.1e-29	44.76	Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1	[more]
Q96261	2.4e-25	45.19	Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1	[more]
Q07322	5.5e-22	34.84	Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1	[more]
P30287	1.0e-15	36.12	Dehydrin Rab25 OS=Oryza sativa subsp. japonica OX=39947 GN=RAB25 PE=2 SV=2	[more]
P30185	1.4e-14	40.00	Dehydrin Rab18 OS=Arabidopsis thaliana OX=3702 GN=RAB18 PE=2 SV=1	[more]

BLAST of Csor.00g229220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944216.1	1.18e-139	100.00	late embryogenesis abundant protein-like [Cucurbita moschata] >KAG6571093.1 hypo...	[more]
XP_023513012.1	1.95e-131	96.12	late embryogenesis abundant protein-like [Cucurbita pepo subsp. pepo]	[more]
XP_022986610.1	3.80e-131	95.63	late embryogenesis abundant protein-like [Cucurbita maxima]	[more]
XP_004150075.1	3.16e-60	60.29	embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein C...	[more]
XP_038902143.1	3.17e-56	59.13	embryogenic cell protein 40-like isoform X1 [Benincasa hispida]	[more]

BLAST of Csor.00g229220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FTT6	5.73e-140	100.00	late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1JEI1	1.84e-131	95.63	late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A0A0LPB7	1.53e-60	60.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1	[more]
A0A1S3CDP4	1.04e-52	55.50	late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700...	[more]
A0A6J1CYY9	1.45e-42	51.16	late embryogenesis abundant protein-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Csor.00g229220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21490.1	1.7e-26	45.19	dehydrin LEA	[more]
AT5G66400.1	1.0e-15	40.00	Dehydrin family protein	[more]
AT3G50980.1	8.7e-15	47.69	dehydrin xero 1	[more]
AT5G66400.2	5.6e-14	38.05	Dehydrin family protein	[more]
AT4G39130.1	1.4e-12	34.95	Dehydrin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 49..206 e-value: 3.3E-34 score: 118.7
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 46..206
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 1..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..74
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 184..206
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..50
None	No IPR available	PANTHER	PTHR33346:SF5	DEHYDRIN XERO 2-RELATED	coord: 46..206 coord: 1..40
IPR030513	Dehydrin, conserved site	PROSITE	PS00315	DEHYDRIN_1	coord: 127..144
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 197..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g229220.m01	Csor.00g229220.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006950	response to stress
biological_process	GO:0009415	response to water
cellular_component	GO:0005829	cytosol