Csor.00g229150 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATCTGTCAATTTCTACGATGTAAGAGCAGCGAAGATGAACGCGATTCTCAAGTATCGACAGGTCAGGAAAATCGCTAATCTGTTTCGATTCATCGAATTGTGCTTGATTCTCGTTGTGATCACGAGATTTTCTAGCAATCTGCCGAGCGCCTTCAAGAACTCTGGCGAGTACTTCCGGTGCTTGTCGGTGACATTGATCAGTCCTCGCTTTGTGTTTCTGATCGGAAACGCTATTGTAATCACTTTGTTTGCCAAATCTGGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCGTTCGAAACAGTGAGAAGAATCAGAAAACTCGCCGCGCCGAGATCGAGTATCGCGTTAAACAGATCGATGACAGCCGTGGCAACGGCAACAGCGATACCTCGATCGCTATCAAAAAAATCGGCGAAATCAAACATTATCAGAGGAGTGAATCGGAGAAAATAGGCGTCGTACAGCGAGAAAATCCGCATCGTAAACTTCGCCGATCGGAGACGGAAAAGTGTAAGAAAATCGTCCGATTGAGTGAAGAAACAAGAAATAGGCCGAGTCCGGAAGATCGGATGAGCAACGAAGAGTTTCGACAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGAGAAGGGAGGAAGAATTCTGTGTATTTTAG ATGGAATCTGTCAATTTCTACGATGTAAGAGCAGCGAAGATGAACGCGATTCTCAAGTATCGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCGTTCGAAACAGTGAGAAGAATCAGAAAACTCGCCGCGCCGAGATCGAGTATCGCGTTAAACAGATCGATGACAGCCGTGGCAACGGCAACAGCGATACCTCGATCGCTATCAAAAAAATCGGCGAAATCAAACATTATCAGAGGAGTGAATCGGAGAAAATAGGCGTCGTACAGCGAGAAAATCCGCATCGTAAACTTCGCCGATCGGAGACGGAAAAGTGTAAGAAAATCGTCCGATTGAGTGAAGAAACAAGAAATAGGCCGAGTCCGGAAGATCGGATGAGCAACGAAGAGTTTCGACAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGAGAAGGGAGGAAGAATTCTGTGTATTTTAG ATGGAATCTGTCAATTTCTACGATGTAAGAGCAGCGAAGATGAACGCGATTCTCAAGTATCGACAGTTCTCTGCTAAGGATCCGAGCAAGAAGAATTCGGTTGCCGATCTTTACGAGGAGTTCGTTCGAAACAGTGAGAAGAATCAGAAAACTCGCCGCGCCGAGATCGAGTATCGCGTTAAACAGATCGATGACAGCCGTGGCAACGGCAACAGCGATACCTCGATCGCTATCAAAAAAATCGGCGAAATCAAACATTATCAGAGGAGTGAATCGGAGAAAATAGGCGTCGTACAGCGAGAAAATCCGCATCGTAAACTTCGCCGATCGGAGACGGAAAAGTGTAAGAAAATCGTCCGATTGAGTGAAGAAACAAGAAATAGGCCGAGTCCGGAAGATCGGATGAGCAACGAAGAGTTTCGACAGACGGTGGAGGCGTTCATAGCGCGGCAGCAGAGGTTGAGAAGGGAGGAAGAATTCTGTGTATTTTAG MESVNFYDVRAAKMNAILKYRQFSAKDPSKKNSVADLYEEFVRNSEKNQKTRRAEIEYRVKQIDDSRGNGNSDTSIAIKKIGEIKHYQRSESEKIGVVQRENPHRKLRRSETEKCKKIVRLSEETRNRPSPEDRMSNEEFRQTVEAFIARQQRLRREEEFCVF Homology
BLAST of Csor.00g229150 vs. NCBI nr
Match: KAG6571100.1 (hypothetical protein SDJN03_30015, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 305 bits (782), Expect = 2.52e-104 Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g229150 vs. NCBI nr
Match: XP_022944120.1 (uncharacterized protein LOC111448669 [Cucurbita moschata] >XP_023512841.1 uncharacterized protein LOC111777456 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 302 bits (774), Expect = 4.18e-103 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g229150 vs. NCBI nr
Match: XP_022986605.1 (uncharacterized protein LOC111484294 isoform X2 [Cucurbita maxima]) HSP 1 Score: 290 bits (742), Expect = 3.39e-98 Identity = 159/165 (96.36%), Postives = 161/165 (97.58%), Query Frame = 0
BLAST of Csor.00g229150 vs. NCBI nr
Match: KAG7010922.1 (hypothetical protein SDJN02_27720, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 271 bits (692), Expect = 1.33e-89 Identity = 160/231 (69.26%), Postives = 163/231 (70.56%), Query Frame = 0
BLAST of Csor.00g229150 vs. NCBI nr
Match: XP_022986604.1 (uncharacterized protein LOC111484294 isoform X1 [Cucurbita maxima]) HSP 1 Score: 259 bits (663), Expect = 3.68e-85 Identity = 159/233 (68.24%), Postives = 161/233 (69.10%), Query Frame = 0
BLAST of Csor.00g229150 vs. ExPASy TrEMBL
Match: A0A6J1FYH2 (uncharacterized protein LOC111448669 OS=Cucurbita moschata OX=3662 GN=LOC111448669 PE=4 SV=1) HSP 1 Score: 302 bits (774), Expect = 2.03e-103 Identity = 161/163 (98.77%), Postives = 163/163 (100.00%), Query Frame = 0
BLAST of Csor.00g229150 vs. ExPASy TrEMBL
Match: A0A6J1JEH8 (uncharacterized protein LOC111484294 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484294 PE=4 SV=1) HSP 1 Score: 290 bits (742), Expect = 1.64e-98 Identity = 159/165 (96.36%), Postives = 161/165 (97.58%), Query Frame = 0
BLAST of Csor.00g229150 vs. ExPASy TrEMBL
Match: A0A6J1JGH7 (uncharacterized protein LOC111484294 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484294 PE=4 SV=1) HSP 1 Score: 259 bits (663), Expect = 1.78e-85 Identity = 159/233 (68.24%), Postives = 161/233 (69.10%), Query Frame = 0
BLAST of Csor.00g229150 vs. ExPASy TrEMBL
Match: A0A6J1CYN5 (uncharacterized protein LOC111015401 OS=Momordica charantia OX=3673 GN=LOC111015401 PE=4 SV=1) HSP 1 Score: 191 bits (485), Expect = 1.69e-58 Identity = 124/234 (52.99%), Postives = 137/234 (58.55%), Query Frame = 0
BLAST of Csor.00g229150 vs. ExPASy TrEMBL
Match: A0A6J1L691 (uncharacterized protein LOC111499556 OS=Cucurbita maxima OX=3661 GN=LOC111499556 PE=4 SV=1) HSP 1 Score: 179 bits (455), Expect = 1.05e-53 Identity = 108/162 (66.67%), Postives = 120/162 (74.07%), Query Frame = 0
BLAST of Csor.00g229150 vs. TAIR 10
Match: AT5G66440.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34560.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 2.6e-06 Identity = 52/146 (35.62%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of Csor.00g229150 vs. TAIR 10
Match: AT4G34560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66440.1); Has 67 Blast hits to 66 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 7.6e-06 Identity = 43/146 (29.45%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of Csor.00g229150 vs. TAIR 10
Match: AT2G21560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae - 0; Bacteria - 156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses - 6; Other Eukaryotes - 1879 (source: NCBI BLink). ) HSP 1 Score: 41.2 bits (95), Expect = 9.3e-04 Identity = 45/151 (29.80%), Postives = 75/151 (49.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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