Csor.00g228270 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g228270
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Profilin
Location	Csor_Chr05: 10938283 .. 10939760 (-)
RNA-Seq Expression	Csor.00g228270
Synteny	Csor.00g228270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGGTTTACGCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTAATCTTTTACAGAAAATATGAAATCCGAGTATTGATTTGATTGACTGCTTGTTATCGATGGCTGGATCTGTCTGGATTTTTAATCCAAGATCTCGTGGTTCAGAGCATGATGAATATGATGGATTTTTTTTTTAATCGTGGCTGATTTGATCTGATTGTTGTATGTCGATGCATGGCTTCGGGAGTCTCAAGGTTTAAATCGGTTGGTCGATGTAATTCTATGCAGTTTCGTTAGATGTGATTGAAATTAGAATCTGTTGTTGTTTCCATTTTGTTTAGATGTAGCGATTGTACGAGGCAGTAAAGATCTGGAGTTTTCTATTACCGTCATCTAGGGTTCTAGATTTACTTCGGAGCATTTCGATTTTATTCTCAATTATTTCTGTATTAGTTACGAAATGGTCAAGATGCTGTGCTGATTTCTCTTTAGACCGTCTTGATGATCGATTTCATATTGTGTATTTGATGGAATTCTTAGAAGAAGTCAAGGATGTTTGTCCTAACTTTCCTGGTTTCCTGTCCACTTTATGAGGTCCTCAATGCATGTTCCTACTTTTGTGGTTTGCAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGTAATAAAAAATTCAATGAAAATGTTCTATAATTAATTCTGAGTTCTGACTTTGAGAGATGATGGGCATGCAAGCAATTTATTCTGAAAGTGTTCTAAACTTAACTTTATAAGTTGCAATGAATATGAGAACCTTCATCCTAGATTAGTTTTCTAATTGGTCAGTGTTAAAAGTTTCTAAATTCATTATGTATTGGATTCTGCAGCAAAATTTGTTATCATGTTTACACTGCTTGGTGTATTTACCTTTGATCTGGCAATTAGATTCTCCTTTCCATTGAATTTTAAACCAATATATCTCTTGATTTTAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTCTGGCTCTAGTCATTGGCATCTATGATGAACCAATGACTCCTGGTCAGTGCAATATGATCGTTGAAAGGCTTGGGGATTATCTCGTCGACCAGGGTCTTTAAATATCGGTATGCTTGCTTGCTACCTTTGTATGCGATCGATCCTATTTCTTTTCAGCATCCATATTTCTCTTATTGCTGATACAATCTTTTGGATTGTTAATTGCTGCAGGGGAACCGCCTATTGTGTACAAGTCTATGGACTCTTGAATGAGTGGAAATGGGTTTGA

mRNA sequence

ATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGCTTGGGGATTATCTCGTCGACCAGGGTCTTTAAATATCGGGGAACCGCCTATTGTGTACAAGTCTATGGACTCTTGAATGAGTGGAAATGGGTTTGA

Coding sequence (CDS)

ATGTCGTGGCAAGTGTACGTCGACGATCATTTGATGTGCGATATTGAGGGCAATCACCTCTCATCTGCAGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGAAACTTTCCCCAAGTTCAAGCCTGAAGAAATTGCTGCCATCATGAATGACTTCAGTGAGCCCGGGACGCTTGCTCCAACTGGTTTGTATCTTGGTGGCTCAAAGTATATGGTAATCCAAGGGGAGCCTGGAGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGCTTGGGGATTATCTCGTCGACCAGGGTCTTTAAATATCGGGGAACCGCCTATTGTGTACAAGTCTATGGACTCTTGAATGAGTGGAAATGGGTTTGA

Protein sequence

MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGIISSTRVFKYRGTAYCVQVYGLLNEWKWV

Homology

[Close]

BLAST of Csor.00g228270 vs. ExPASy Swiss-Prot
Match: O65809 (Profilin-1 OS=Glycine max OX=3847 GN=PRO1 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 3.1e-47
Identity = 87/102 (85.29%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHL+CDIEGNHL+ AAIIG DGSVWAQS  FP+FKPEEI AIMNDF+EPG+L
Sbjct: 1   MSWQAYVDDHLLCDIEGNHLTHAAIIGQDGSVWAQSTDFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKTG  +I
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALI 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy Swiss-Prot
Match: O82572 (Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 5.3e-47
Identity = 87/102 (85.29%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHL+SAAIIG DGSVWAQS TFP+FKPEEI AIMNDF+EPG+L
Sbjct: 1   MSWQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           APTGLYL G+KYMVIQGEPGAVIRGKKGPGGVTVKKT   +I
Sbjct: 61  APTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALI 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy Swiss-Prot
Match: Q5XWE1 (Profilin OS=Citrullus lanatus OX=3654 PE=1 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 6.9e-47
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHL+SAAIIG DGSVWA+SE FP+ KPEEI  I+NDF+EPGTL
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLTSAAIIGQDGSVWAKSENFPQLKPEEITGILNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           APTGLY+GGSKYMVIQGEPGAVIRGKKGPGGVTVKKT L ++
Sbjct: 61  APTGLYIGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTALALV 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy Swiss-Prot
Match: Q64LH1 (Profilin-1 OS=Ambrosia artemisiifolia OX=4212 GN=D106 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-46
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHLS+AAIIGHDG VWAQS TFP+ KPEEI  IMNDF+EPG+L
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKPEEITGIMNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVT+KKT + +I
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTTMSLI 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy Swiss-Prot
Match: Q64LH2 (Profilin-2 OS=Ambrosia artemisiifolia OX=4212 GN=A0418 PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.2e-46
Identity = 85/102 (83.33%), Postives = 94/102 (92.16%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC+IEGNHLS+AAIIGHDG VWAQS TFP+ KPEEI  IMNDF+EPG+L
Sbjct: 1   MSWQAYVDDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKPEEITGIMNDFNEPGSL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVT+KKT + +I
Sbjct: 61  APTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTTMALI 102

[Close]

BLAST of Csor.00g228270 vs. NCBI nr
Match: KAG6599487.1 (Profilin-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 269 bits (687), Expect = 6.03e-91
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGIISSTRVFKYRGTAYCVQVY 120
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGIISSTRVFKYRGTAYCVQVY
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGIISSTRVFKYRGTAYCVQVY 120

Query: 121 GLLNEWKWV 129
           GLLNEWKWV
Sbjct: 121 GLLNEWKWV 129

[Close]

BLAST of Csor.00g228270 vs. NCBI nr
Match: XP_022946037.1 (profilin-1 [Cucurbita moschata] >XP_022946038.1 profilin-1 [Cucurbita moschata])

HSP 1 Score: 206 bits (524), Expect = 4.65e-66
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGL ++
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALV 102

[Close]

BLAST of Csor.00g228270 vs. NCBI nr
Match: KAG7030463.1 (Profilin-1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 206 bits (524), Expect = 6.44e-66
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGL ++
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALV 102

[Close]

BLAST of Csor.00g228270 vs. NCBI nr
Match: XP_023546560.1 (profilin-1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 205 bits (521), Expect = 1.33e-65
Identity = 98/102 (96.08%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGL ++
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALV 102

[Close]

BLAST of Csor.00g228270 vs. NCBI nr
Match: XP_022999543.1 (profilin-1 [Cucurbita maxima])

HSP 1 Score: 204 bits (518), Expect = 3.82e-65
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGL ++
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALV 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy TrEMBL
Match: A0A6J1G2P2 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450248 PE=3 SV=1)

HSP 1 Score: 206 bits (524), Expect = 2.25e-66
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGL ++
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALV 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy TrEMBL
Match: A0A6J1KK00 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493872 PE=3 SV=1)

HSP 1 Score: 204 bits (518), Expect = 1.85e-65
Identity = 97/102 (95.10%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDF+EPGTL
Sbjct: 1   MSWQVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFNEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGL ++
Sbjct: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALV 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy TrEMBL
Match: A0A6J1HSG7 (Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465722 PE=3 SV=1)

HSP 1 Score: 191 bits (485), Expect = 1.97e-60
Identity = 90/102 (88.24%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSW VYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQS++FP+FKPEEI AIMNDF+EPG L
Sbjct: 1   MSWNVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSDSFPQFKPEEITAIMNDFNEPGVL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKT L +I
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSLALI 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy TrEMBL
Match: A0A6J1DKC9 (Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1)

HSP 1 Score: 191 bits (484), Expect = 2.80e-60
Identity = 90/102 (88.24%), Postives = 97/102 (95.10%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQVYVDDHLMC+IEGNHL+S+AIIGHDGSVWAQS  FP FKPEEI+AIMNDFSEPGTL
Sbjct: 1   MSWQVYVDDHLMCEIEGNHLTSSAIIGHDGSVWAQSAAFPPFKPEEISAIMNDFSEPGTL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGG+KYMVIQGEPGAVIRGKKGPGGVTVKKT + +I
Sbjct: 61  APTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTSMALI 102

[Close]

BLAST of Csor.00g228270 vs. ExPASy TrEMBL
Match: A0A6J1FG70 (Profilin OS=Cucurbita moschata OX=3662 GN=LOC111443890 PE=3 SV=1)

HSP 1 Score: 190 bits (482), Expect = 5.66e-60
Identity = 89/102 (87.25%), Postives = 96/102 (94.12%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSW VYVDDHLMCDIEGNHL+SAAIIGHDGSVWAQS TFP+FKP+EI AIMNDF+EPG L
Sbjct: 1   MSWSVYVDDHLMCDIEGNHLTSAAIIGHDGSVWAQSNTFPQFKPDEITAIMNDFNEPGVL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 102
           APTGLYLGG+KYMVIQGEPG VIRGKKGPGGVTVKKTG+ +I
Sbjct: 61  APTGLYLGGAKYMVIQGEPGYVIRGKKGPGGVTVKKTGMALI 102

[Close]

BLAST of Csor.00g228270 vs. TAIR 10
Match: AT2G19760.1 (profilin 1 )

HSP 1 Score: 168.7 bits (426), Expect = 3.1e-42
Identity = 76/102 (74.51%), Postives = 86/102 (84.31%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMCD+EGNHL++AAI+G DGSVWAQS  FP+ KP+EI  I  DF EPG L
Sbjct: 1   MSWQSYVDDHLMCDVEGNHLTAAAILGQDGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           APTGL+LGG KYMVIQGE GAVIRGKKGPGGVT+KKT   ++
Sbjct: 61  APTGLFLGGEKYMVIQGEQGAVIRGKKGPGGVTIKKTNQALV 102

[Close]

BLAST of Csor.00g228270 vs. TAIR 10
Match: AT5G56600.1 (profilin 3 )

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-41
Identity = 75/102 (73.53%), Postives = 87/102 (85.29%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMCD+ GN L++AAI+G DGSVWAQS  FP+ KPEEI  I +DF+ PGTL
Sbjct: 38  MSWQTYVDDHLMCDVAGNRLTAAAILGQDGSVWAQSNNFPQVKPEEIQGIKDDFTTPGTL 97

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           APTGL+LGG+KYMVIQGEP AVIRGKKG GGVT+KKT L ++
Sbjct: 98  APTGLFLGGNKYMVIQGEPNAVIRGKKGAGGVTIKKTTLALV 139

[Close]

BLAST of Csor.00g228270 vs. TAIR 10
Match: AT2G19770.1 (profilin 5 )

HSP 1 Score: 163.7 bits (413), Expect = 9.9e-41
Identity = 74/105 (70.48%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDI---EGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEP 60
           MSWQ YVD+HLMCD+   +G+HL++AAIIGHDGSVWAQS  FP+FKP+EI  IM DF EP
Sbjct: 1   MSWQAYVDEHLMCDVGDGQGHHLTAAAIIGHDGSVWAQSANFPQFKPQEITDIMKDFDEP 60

Query: 61  GTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           G LAPTG++L G KYMVIQGEP AVIRGKKG GG+T+KKTG  ++
Sbjct: 61  GHLAPTGMFLAGLKYMVIQGEPNAVIRGKKGAGGITIKKTGQSMV 105

[Close]

BLAST of Csor.00g228270 vs. TAIR 10
Match: AT4G29350.1 (profilin 2 )

HSP 1 Score: 162.9 bits (411), Expect = 1.7e-40
Identity = 74/102 (72.55%), Postives = 83/102 (81.37%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDIEGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEPGTL 60
           MSWQ YVDDHLMC++EGNHL+ AAI G DGSVWAQS  FP+ KP EIA I  DF E G L
Sbjct: 1   MSWQSYVDDHLMCEVEGNHLTHAAIFGQDGSVWAQSSAFPQLKPAEIAGINKDFEEAGHL 60

Query: 61  APTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTGLGII 103
           APTGL+LGG KYMV+QGE GAVIRGKKGPGGVT+KKT   ++
Sbjct: 61  APTGLFLGGEKYMVVQGEAGAVIRGKKGPGGVTIKKTTQALV 102

[Close]

BLAST of Csor.00g228270 vs. TAIR 10
Match: AT4G29340.1 (profilin 4 )

HSP 1 Score: 161.4 bits (407), Expect = 4.9e-40
Identity = 72/101 (71.29%), Postives = 87/101 (86.14%), Query Frame = 0


Query: 1   MSWQVYVDDHLMCDI---EGNHLSSAAIIGHDGSVWAQSETFPKFKPEEIAAIMNDFSEP 60
           MSWQ YVD+HLMCD+   +G+HL++AAI+GHDGSVWAQS  FP+FK +E + IM DF EP
Sbjct: 1   MSWQTYVDEHLMCDVGDGQGHHLTAAAIVGHDGSVWAQSANFPQFKGQEFSDIMKDFDEP 60

Query: 61  GTLAPTGLYLGGSKYMVIQGEPGAVIRGKKGPGGVTVKKTG 99
           G LAPTGL++ G+KYMVIQGEPGAVIRGKKG GG+T+KKTG
Sbjct: 61  GHLAPTGLFMAGAKYMVIQGEPGAVIRGKKGAGGITIKKTG 101

The following BLAST results are available for this feature:

BLAST of Csor.00g228270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O65809	3.1e-47	85.29	Profilin-1 OS=Glycine max OX=3847 GN=PRO1 PE=1 SV=1	[more]
O82572	5.3e-47	85.29	Profilin-1 OS=Ricinus communis OX=3988 GN=PRO1 PE=2 SV=1	[more]
Q5XWE1	6.9e-47	83.33	Profilin OS=Citrullus lanatus OX=3654 PE=1 SV=1	[more]
Q64LH1	1.2e-46	83.33	Profilin-1 OS=Ambrosia artemisiifolia OX=4212 GN=D106 PE=1 SV=1	[more]
Q64LH2	1.2e-46	83.33	Profilin-2 OS=Ambrosia artemisiifolia OX=4212 GN=A0418 PE=1 SV=1	[more]

BLAST of Csor.00g228270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6599487.1	6.03e-91	100.00	Profilin-1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022946037.1	4.65e-66	97.06	profilin-1 [Cucurbita moschata] >XP_022946038.1 profilin-1 [Cucurbita moschata]	[more]
KAG7030463.1	6.44e-66	97.06	Profilin-1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023546560.1	1.33e-65	96.08	profilin-1 [Cucurbita pepo subsp. pepo]	[more]
XP_022999543.1	3.82e-65	95.10	profilin-1 [Cucurbita maxima]	[more]

BLAST of Csor.00g228270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G2P2	2.25e-66	97.06	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111450248 PE=3 SV=1	[more]
A0A6J1KK00	1.85e-65	95.10	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111493872 PE=3 SV=1	[more]
A0A6J1HSG7	1.97e-60	88.24	Profilin OS=Cucurbita maxima OX=3661 GN=LOC111465722 PE=3 SV=1	[more]
A0A6J1DKC9	2.80e-60	88.24	Profilin OS=Momordica charantia OX=3673 GN=LOC111021891 PE=3 SV=1	[more]
A0A6J1FG70	5.66e-60	87.25	Profilin OS=Cucurbita moschata OX=3662 GN=LOC111443890 PE=3 SV=1	[more]

BLAST of Csor.00g228270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19760.1	3.1e-42	74.51	profilin 1	[more]
AT5G56600.1	1.2e-41	73.53	profilin 3	[more]
AT2G19770.1	9.9e-41	70.48	profilin 5	[more]
AT4G29350.1	1.7e-40	72.55	profilin 2	[more]
AT4G29340.1	4.9e-40	71.29	profilin 4	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005455	Profilin	PRINTS	PR00392	PROFILIN	coord: 40..60 score: 54.4 coord: 64..78 score: 69.0 coord: 3..12 score: 72.0 coord: 21..30 score: 67.0
IPR005455	Profilin	PRINTS	PR01640	PROFILINPLNT	coord: 27..40 score: 82.21 coord: 84..99 score: 78.07 coord: 1..14 score: 84.42 coord: 52..66 score: 75.52 coord: 71..80 score: 96.73
IPR005455	Profilin	SMART	SM00392	prof_2	coord: 1..128 e-value: 1.3E-29 score: 114.4
IPR005455	Profilin	PFAM	PF00235	Profilin	coord: 1..102 e-value: 9.8E-28 score: 96.9
IPR005455	Profilin	PANTHER	PTHR11604	PROFILIN	coord: 1..102
IPR005455	Profilin	CDD	cd00148	PROF	coord: 2..102 e-value: 4.32134E-38 score: 123.59
None	No IPR available	GENE3D	3.30.450.30	Dynein light chain 2a, cytoplasmic	coord: 1..119 e-value: 4.1E-40 score: 138.9
None	No IPR available	PANTHER	PTHR11604:SF47	PROFILIN	coord: 1..102
IPR027310	Profilin conserved site	PROSITE	PS00414	PROFILIN	coord: 1..8
IPR036140	Profilin superfamily	SUPERFAMILY	55770	Profilin (actin-binding protein)	coord: 2..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g228270.m01	Csor.00g228270.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042989	sequestering of actin monomers
cellular_component	GO:0005938	cell cortex
cellular_component	GO:0005856	cytoskeleton
molecular_function	GO:0003785	actin monomer binding
molecular_function	GO:0003779	actin binding