Csor.00g227520 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g227520
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	HTH myb-type domain-containing protein
Location	Csor_Chr09: 3653987 .. 3655410 (-)
RNA-Seq Expression	Csor.00g227520
Synteny	Csor.00g227520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAATCCTGTTCATCGGAGAGAATCGGAGTTAGACAGTATAATAAATCGGAACTGCCGCGGCTGCGGTGGACGCCGGAGCTTCATCGGTACTTCGTTCAGACCGTCGAGATCCTTGGCGGAAGAAATCGTAAGTTGTATTTATTAGGTTTGTTTACTTTCATCACGCTATGAAACAAAAAACTGTTTCAGAAAGAGTGTATGCGTCCGTATTGGAATCTTGATTGCTTTTTTCTGAAATCTGACTTGTTGCAGAAGCAACGCCGAAAAGAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATATCACACATAAAGAGCCATTTACAGGTGCTTTTCAATTAAATTTTGATAAACGCTAATTTTCCATCGCTATCGTTGGCACGAGTGATTATTTCTTTTTTATTACGGTTACATTTTCTCGTCAATTCATTAAAAAAAAAACCTCTCCGATTTTTTAAAATCTATTTATAGTTCCGGTATGATCATGCTTGATTCAGTATTTGGATGGTGAATTGATACCAAAACAAATACAGACGAATTAAGGTCTTGTTTGATTAGGTCTTATTTAATCCTTCAACTGGATGTTTCCGTTTACAATTTGGAGTTTGTGACTTGTATAACCATATAGAGTCTGCTGATCTCATAAACCTACCACACATCATAGTTTAAAAAAAGAATAAGCACATTTTATACGGGATCTATACAAACCAAGCATGTTTGTTAAGTAGATTTGAATTTTCCAACTCCTAATTACACAAACTCAAATTTGATTTGTTAAACCTAATGAGCCGAACATGAAAAGTATTTTCATAACCGGAAAAGACAAATTATGAATAAAAAATTCCGAGAAACTTACTCAAATATTTGAATCAAGCCGTGTAAACTCTCTCTCTAAATGTGAAAATGGCATTAAGCCAAACAGACTAAGACGATAAGAATAGTAGTAGCTTCCTAGGTAGGATTTGAACATTGTATTAATTAAGTTCTGGTTAGGTACATTCCATACAGCGGGAGAGAAAAGTAGGCTTTAATTCAATTAAATATGAAAATAAAGACAAAAGAAGTAGAATCATTACGAGTTCGTGCATGGCGACGCTACTCATTTTTAATCATGAGTCGTAAATAACCATTATTCTTTGTGAGTGTGTACATAGCTTTTTGTATTCTAGTAAAATTGTTCTTCTTCATTATTGTTCATTTTTTTACTCATTATCTATCCATTTTGGGCAGATGTACAGAAGTATGAAACTAGAGCAGGGCAGTAGTACTAGGTTCGAGGATGTAGTGCTGAAACAAGCCACGAAGCAGACAAGAGGAACAACGCTGCACTCTTCTGATATCAAAATCTTCTTGTCTTCGGTCTCCTCTTCAAGTGGGTACGTTCATCAATTTTCTTCCTCTAATCATTTACTGCCGTAA

mRNA sequence

ATGAAATCCTGTTCATCGGAGAGAATCGGAGTTAGACAGTATAATAAATCGGAACTGCCGCGGCTGCGGTGGACGCCGGAGCTTCATCGGTACTTCGTTCAGACCGTCGAGATCCTTGGCGGAAGAAATCAAGCAACGCCGAAAAGAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATATCACACATAAAGAGCCATTTACAGATGTACAGAAGTATGAAACTAGAGCAGGGCAGTAGTACTAGGTTCGAGGATGTAGTGCTGAAACAAGCCACGAAGCAGACAAGAGGAACAACGCTGCACTCTTCTGATATCAAAATCTTCTTGTCTTCGGTCTCCTCTTCAAGTGGGTACGTTCATCAATTTTCTTCCTCTAATCATTTACTGCCGTAA

Coding sequence (CDS)

ATGAAATCCTGTTCATCGGAGAGAATCGGAGTTAGACAGTATAATAAATCGGAACTGCCGCGGCTGCGGTGGACGCCGGAGCTTCATCGGTACTTCGTTCAGACCGTCGAGATCCTTGGCGGAAGAAATCAAGCAACGCCGAAAAGAATCCTGCAAATGATGGGAGTGAAAGGACTGAAGATATCACACATAAAGAGCCATTTACAGATGTACAGAAGTATGAAACTAGAGCAGGGCAGTAGTACTAGGTTCGAGGATGTAGTGCTGAAACAAGCCACGAAGCAGACAAGAGGAACAACGCTGCACTCTTCTGATATCAAAATCTTCTTGTCTTCGGTCTCCTCTTCAAGTGGGTACGTTCATCAATTTTCTTCCTCTAATCATTTACTGCCGTAA

Protein sequence

MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYVHQFSSSNHLLP

Homology

[Close]

BLAST of Csor.00g227520 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 5.8e-25
Identity = 58/90 (64.44%), Postives = 70/90 (77.78%), Query Frame = 0


Query: 7  ERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKS 66
          ER GVRQYN+SE+PR+RWT E+HR FV+ VE LGG+++ATPKRILQ+MGVKG+ ISHIKS
Sbjct: 5  ERRGVRQYNRSEVPRMRWTEEMHRQFVEAVECLGGQDEATPKRILQLMGVKGVSISHIKS 64

Query: 67 HLQMYRSMKLEQGSSTRFEDVVLKQATKQT 97
          HLQMYRS     GSS     V L++ T  T
Sbjct: 65 HLQMYRS-----GSSNSNHPVSLQKLTSAT 89

[Close]

BLAST of Csor.00g227520 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 7.3e-20
Identity = 49/76 (64.47%), Postives = 60/76 (78.95%), Query Frame = 0


Query: 11 VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQM 70
          VRQY +S++PRLRWT ELH  FVQ +E LGG+++ATPK ILQ+MGVKGL ISH+KSHLQM
Sbjct: 14 VRQYIRSKVPRLRWTGELHCSFVQAIEFLGGQDKATPKLILQLMGVKGLTISHVKSHLQM 73

Query: 71 YRSMKL-EQGSSTRFE 86
          YR  +L   G+  R E
Sbjct: 74 YRCSRLGSHGTGRRSE 89

[Close]

BLAST of Csor.00g227520 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 4.7e-19
Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 10 GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ 69
          GVR Y +S +PRLRWTPELHR FV  V++LGG+ +ATPK +L++M VKGL ISH+KSHLQ
Sbjct: 14 GVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQ 73

Query: 70 MYRSMKL 77
          MYR  ++
Sbjct: 74 MYRGSRI 80

[Close]

BLAST of Csor.00g227520 vs. ExPASy Swiss-Prot
Match: Q9FJV5 (Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 9.2e-15
Identity = 36/74 (48.65%), Postives = 55/74 (74.32%), Query Frame = 0


Query: 2   KSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKI 61
           K  SS  +G+++  ++  PR+RWT  LH +FV  V++LGG  +ATPK +L++M VK L +
Sbjct: 90  KRSSSSMVGLKRSIRA--PRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTL 149

Query: 62  SHIKSHLQMYRSMK 76
           +H+KSHLQMYR++K
Sbjct: 150 AHVKSHLQMYRTVK 161

[Close]

BLAST of Csor.00g227520 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.0e-13
Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 0


Query: 20  PRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQMYRSMK 76
           PR+RWT  LH  FV  VE+LGG  +ATPK +L++M VK L ++H+KSHLQMYR++K
Sbjct: 220 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVK 275

[Close]

BLAST of Csor.00g227520 vs. NCBI nr
Match: KAG6591830.1 (putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 255 bits (652), Expect = 1.53e-85
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV
Sbjct: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120

Query: 121 HQFSSSNHLLP 131
           HQFSSSNHLLP
Sbjct: 121 HQFSSSNHLLP 131

[Close]

BLAST of Csor.00g227520 vs. NCBI nr
Match: KAG7024696.1 (putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (585), Expect = 6.24e-74
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSG +
Sbjct: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGTL 120

Query: 121 HQ 122
            +
Sbjct: 121 RE 122

[Close]

BLAST of Csor.00g227520 vs. NCBI nr
Match: XP_022937030.1 (putative Myb family transcription factor At1g14600 [Cucurbita moschata])

HSP 1 Score: 228 bits (581), Expect = 2.53e-73
Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMKLEQGSS+RFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSG +
Sbjct: 61  ISHIKSHLQMYRSMKLEQGSSSRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGTL 120

Query: 121 HQ 122
            +
Sbjct: 121 RE 122

[Close]

BLAST of Csor.00g227520 vs. NCBI nr
Match: KAG6591802.1 (putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229 bits (585), Expect = 1.21e-72
Identity = 118/122 (96.72%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSG +
Sbjct: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGTL 120

Query: 121 HQ 122
            +
Sbjct: 121 RE 122

[Close]

BLAST of Csor.00g227520 vs. NCBI nr
Match: XP_023536489.1 (probable transcription factor KAN4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226 bits (575), Expect = 2.07e-72
Identity = 116/122 (95.08%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMKLEQGSS+RFEDVVLKQATKQTRG TLHSSDIKIFLSSVSSSSG +
Sbjct: 61  ISHIKSHLQMYRSMKLEQGSSSRFEDVVLKQATKQTRGRTLHSSDIKIFLSSVSSSSGTL 120

Query: 121 HQ 122
            +
Sbjct: 121 RE 122

[Close]

BLAST of Csor.00g227520 vs. ExPASy TrEMBL
Match: A0A6J1FFE3 (putative Myb family transcription factor At1g14600 OS=Cucurbita moschata OX=3662 GN=LOC111443450 PE=4 SV=1)

HSP 1 Score: 228 bits (581), Expect = 1.23e-73
Identity = 117/122 (95.90%), Postives = 120/122 (98.36%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMKLEQGSS+RFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSG +
Sbjct: 61  ISHIKSHLQMYRSMKLEQGSSSRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGTL 120

Query: 121 HQ 122
            +
Sbjct: 121 RE 122

[Close]

BLAST of Csor.00g227520 vs. ExPASy TrEMBL
Match: A0A6J1IGV1 (putative Myb family transcription factor At1g14600 OS=Cucurbita maxima OX=3661 GN=LOC111477099 PE=4 SV=1)

HSP 1 Score: 224 bits (571), Expect = 4.06e-72
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVR+YNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRRYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMKLEQGSS+RFEDVVLKQATKQTRG TLHSSDIKIFLSSVSSSSG +
Sbjct: 61  ISHIKSHLQMYRSMKLEQGSSSRFEDVVLKQATKQTRGRTLHSSDIKIFLSSVSSSSGTL 120

Query: 121 HQ 122
            +
Sbjct: 121 RE 122

[Close]

BLAST of Csor.00g227520 vs. ExPASy TrEMBL
Match: A0A6J1J4K7 (probable transcription factor KAN3 OS=Cucurbita maxima OX=3661 GN=LOC111481270 PE=4 SV=1)

HSP 1 Score: 200 bits (508), Expect = 1.66e-62
Identity = 105/122 (86.07%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPALHRYFVQTVEVLGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMKLE GSS   E V+LKQA +QTR  TLHSSDIKIF+SSVSSSSG +
Sbjct: 61  ISHIKSHLQMYRSMKLEHGSSC--EHVMLKQAMEQTRRRTLHSSDIKIFMSSVSSSSGIL 120

Query: 121 HQ 122
            +
Sbjct: 121 RE 120

[Close]

BLAST of Csor.00g227520 vs. ExPASy TrEMBL
Match: A0A6J1FNB8 (probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111445813 PE=4 SV=1)

HSP 1 Score: 193 bits (490), Expect = 8.70e-60
Identity = 103/122 (84.43%), Postives = 110/122 (90.16%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSSERIGVRQYNKSELPRLRWTP LHRYFVQTVE+LGGRNQATPKRILQMMGVKGLK
Sbjct: 1   MKSCSSERIGVRQYNKSELPRLRWTPALHRYFVQTVEVLGGRNQATPKRILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSSSGYV 120
           ISHIKSHLQMYRSMK E GSS   E V++KQA +QTR T LHSSDIKIF+SSVSSSSG +
Sbjct: 61  ISHIKSHLQMYRSMKSEHGSSC--EHVMMKQAMEQTRRT-LHSSDIKIFMSSVSSSSGIL 119

Query: 121 HQ 122
            +
Sbjct: 121 RE 119

[Close]

BLAST of Csor.00g227520 vs. ExPASy TrEMBL
Match: A0A1S3CS11 (putative Myb family transcription factor At1g14600 OS=Cucumis melo OX=3656 GN=LOC103504120 PE=4 SV=1)

HSP 1 Score: 185 bits (469), Expect = 1.37e-56
Identity = 95/116 (81.90%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 1   MKSCSSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLK 60
           MKSCSS+RIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPK+ILQMMGVKGLK
Sbjct: 1   MKSCSSDRIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKKILQMMGVKGLK 60

Query: 61  ISHIKSHLQMYRSMKLEQGSSTRFEDVVLKQATKQTRGTTLHSSDIKIFLSSVSSS 116
           ISHIKSHLQMYRS+KLE GS    ED+V++Q  K  R  TLHS DIK F SS+SSS
Sbjct: 61  ISHIKSHLQMYRSIKLENGSQC--EDLVMRQGVKHRRRRTLHSCDIKTFFSSISSS 114

[Close]

BLAST of Csor.00g227520 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 98.2 bits (243), Expect = 5.2e-21
Identity = 45/63 (71.43%), Postives = 54/63 (85.71%), Query Frame = 0


Query: 10 GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ 69
          GVR Y +S +PRLRWTP+LHR FV  VEILGG+++ATPK +L+MM VKGL ISH+KSHLQ
Sbjct: 20 GVRPYVRSPVPRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKMMDVKGLTISHVKSHLQ 79

Query: 70 MYR 73
          MYR
Sbjct: 80 MYR 82

[Close]

BLAST of Csor.00g227520 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 6.8e-21
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0


Query: 11  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQM 70
           VRQY +S +PRLRWTP+LH  FV+ V+ LGG ++ATPK +L+MM +KGL I+H+KSHLQM
Sbjct: 42  VRQYIRSNMPRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQM 101

Query: 71  YRSMKLEQGSSTRF 85
           YRS KLE  S   F
Sbjct: 102 YRSKKLEPSSRPGF 115

[Close]

BLAST of Csor.00g227520 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 97.8 bits (242), Expect = 6.8e-21
Identity = 45/68 (66.18%), Postives = 56/68 (82.35%), Query Frame = 0


Query: 11  VRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQM 70
           VR YN+S+ PRLRWTPELH  F+Q VE LGG ++ATPK +LQ+M VKGL I+H+KSHLQM
Sbjct: 74  VRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHLQM 133

Query: 71  YRSMKLEQ 79
           YRS K ++
Sbjct: 134 YRSKKTDE 141

[Close]

BLAST of Csor.00g227520 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 95.5 bits (236), Expect = 3.4e-20
Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0


Query: 10 GVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHIKSHLQ 69
          GVR Y +S +PRLRWTPELHR FV  V++LGG+ +ATPK +L++M VKGL ISH+KSHLQ
Sbjct: 14 GVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQ 73

Query: 70 MYRSMKL 77
          MYR  ++
Sbjct: 74 MYRGSRI 80

[Close]

BLAST of Csor.00g227520 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 95.5 bits (236), Expect = 3.4e-20
Identity = 43/73 (58.90%), Postives = 58/73 (79.45%), Query Frame = 0


Query: 5   SSERIGVRQYNKSELPRLRWTPELHRYFVQTVEILGGRNQATPKRILQMMGVKGLKISHI 64
           S ++  VR Y +S++PRLRWTP+LH  FV+ VE LGG+ +ATPK + QMM +KGL I+H+
Sbjct: 40  SDKKTKVRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHV 99

Query: 65  KSHLQMYRSMKLE 78
           KSHLQMYRS K++
Sbjct: 100 KSHLQMYRSKKID 112

The following BLAST results are available for this feature:

BLAST of Csor.00g227520 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A0P0X0C0	5.8e-25	64.44	Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
A3AWH5	7.3e-20	64.47	Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q700D9	4.7e-19	64.18	Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=37...	[more]
Q9FJV5	9.2e-15	48.65	Probable transcription factor KAN4 OS=Arabidopsis thaliana OX=3702 GN=KAN4 PE=1 ...	[more]
Q93WJ9	1.0e-13	58.93	Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1	[more]

BLAST of Csor.00g227520 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591830.1	1.53e-85	100.00	putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
KAG7024696.1	6.24e-74	96.72	putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_022937030.1	2.53e-73	95.90	putative Myb family transcription factor At1g14600 [Cucurbita moschata]	[more]
KAG6591802.1	1.21e-72	96.72	putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp....	[more]
XP_023536489.1	2.07e-72	95.08	probable transcription factor KAN4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g227520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FFE3	1.23e-73	95.90	putative Myb family transcription factor At1g14600 OS=Cucurbita moschata OX=3662...	[more]
A0A6J1IGV1	4.06e-72	94.26	putative Myb family transcription factor At1g14600 OS=Cucurbita maxima OX=3661 G...	[more]
A0A6J1J4K7	1.66e-62	86.07	probable transcription factor KAN3 OS=Cucurbita maxima OX=3661 GN=LOC111481270 P...	[more]
A0A6J1FNB8	8.70e-60	84.43	probable transcription factor KAN4 OS=Cucurbita moschata OX=3662 GN=LOC111445813...	[more]
A0A1S3CS11	1.37e-56	81.90	putative Myb family transcription factor At1g14600 OS=Cucumis melo OX=3656 GN=LO...	[more]

BLAST of Csor.00g227520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02060.1	5.2e-21	71.43	Homeodomain-like superfamily protein	[more]
AT2G42660.1	6.8e-21	62.16	Homeodomain-like superfamily protein	[more]
AT2G40260.1	6.8e-21	66.18	Homeodomain-like superfamily protein	[more]
AT1G14600.1	3.4e-20	64.18	Homeodomain-like superfamily protein	[more]
AT2G38300.1	3.4e-20	58.90	myb-like HTH transcriptional regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 20..74 e-value: 1.2E-22 score: 77.9
None	No IPR available	GENE3D	1.10.10.60		coord: 19..76 e-value: 2.2E-25 score: 90.5
None	No IPR available	PANTHER	PTHR31314:SF2	MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN	coord: 6..103
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 22..72 e-value: 3.5E-7 score: 30.3
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 16..76 score: 12.292585
IPR044848	PHR1-like	PANTHER	PTHR31314	MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE	coord: 6..103
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 20..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g227520.m01	Csor.00g227520.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity