Csor.00g227450 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g227450
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	serine/arginine-rich splicing factor SR45-like
Location	Csor_Chr09: 3684566 .. 3690480 (-)
RNA-Seq Expression	Csor.00g227450
Synteny	Csor.00g227450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAAGCCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCGGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCTCGAAGCGGTTCTTCTCGAAGCCGAAGCCCTGCTCCTCAAAGAAAGAGGTTTGTCTTTCTTTTGAGCTTGCATTTTTCGTTCTGAGGTCTTGCATTTGGTGCTTATTGGTTGTCAGTGTGTGAGGAAGTATCGGAATTAGGTATTCTATGCTTGGGAGGTTGGTCGATTATGCATTTTCTTTTTTGTCGCTGTTGATTGGTTTTTCTTATATTTATTCGAAGGCATGTTTTGGAATCATTACGTTATCGAGAAACAGACGCGCTCCGTATACCAAAATCCGTTTTTATGCGGTCATTGTATATCGCAATCACATCTTCATTTGTTTTTCAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCACCTCCACCAGCTAAACGAATTTCTCCGCCACCCAGGTAATAATACCTCCGTCTACAGTTAAATCCAACTTCTCATTTTTTATCATCTTATTGACATTTAGTCTCTTCATTATTTGTTCATGACATGCATTTTCCGATAAGTCTTAACATTTATACTTTGGCGCGGTTTTTTATCCCCGCCTTTTGTTAAAGACTGCTTCCGAGCCTCTTCAATGGTTGTTTTTCTGCTGTTTGTTTAGTAAGTTACAAATTATGGATGACAAGGGAACAATTTCGCTTTCAAAAGAAGGTCAAAGTCTAAACCAAAGGAGTTAAAAGAATCCAATTGGTCAAAAGTGTAGAGAGACCATAAGATTTATAAAGGAAGTGCATTTACCCAAAGACGTTGTTTGGAAGTAAATTTGCTTAAAATAATGATCAAAATTATGGTTACTTTCATTCCATGCTGTCCACAAAAAAATCCGAAATGCATCCAAAGAACTCCCCCCCTCCCAAAAGAAAAATGTAACCTTCTTTGGATGAAAATCTGTCCATATCTCTCCTCAAAGAGGATGCAGATCTGTTTCGAACAAACTGAAAAACAAAGAAGATAAGATTTTGATGTATTTACCTCTTAAAAATCTGTCCATACTATTTTTTGAACTTAAATATGGTTTAATATATTATTTTTTATTTTTTTCTAAGAAGCTCATTCTTCCTTATCATTTAGTCAGTTAAAACATGGTTTGATTTAAATTCCTTGACTATTTGTCGAAGCATTAAAAAAATCTTCGAATTCAATACTTTTTCAGAACTGTGGTGTTACTGGTTCATTATTTTCAACTTTTAATCATTTTTTGCCCTTGTTGAACTCAAATGTGATAAAGGATGCTCTATTAGCTTTAATTGTCTTGCAACTAAATTTTATCTTAGTAATCTATAATCACTTGCAAATGTATATGTAATTGACTATTTCAAAGCTGACATTTGCATTTTTTTAATACCAATATTTTCTTTAGTCATGCATCTGTATTATCAGCGATTTACATATAATGCTTTCATTTTGTGATATGCCTGTCAGTTGTATTTATATAATTTGCTTATCACGCTGTCAATTGATTTCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATGCACTGAGTAGGAATGTCCATGAGGGTCATTTAAAAGAAATCTTCAGTATGGTTTTTCACTCGCTTTATTTAGCATTTAAACAATTATTCTGTTGGATAAGTGCACTTATTTCTTCAGATCGTTCTTTTTTTAAAAGTTACAAGTAAAATTCATCAATTAAAACCGAAGAGTAAGACAAAATAAAATCTTATTTCAACCTTCAATCACATTATGTGAAAGATACAACACTTTGACTTCATGAACCTAGTATTTTGTCTTACAAAAAAAGACTGTGTAAACGTATGTATTTATGTATTAGATTCAATTCAACCTAGCCTGTTTATTGGTAATGATCATTGACCGTGTTGTTTTGTCCTCAACAATTGAGTAATTTGTCTTATCAATTACTCTTCATCACTGCATGCTCATTCCTTCCTTTCCTCTCGACTGTTTTCAAATTATAGACAGTTTGTTTTCATGAAATTTTTTATCCTCATTCAATTGAAGTGATCCCCTTGATTTTTCCTCCAAAAGTCTCTATCTATTTAGTTAGGATTGACGATATTGGATTGAATAGGTAATTTGTTATTTTATAAAAAAATTGTAACTCTTATGAATTTCCCTTTTTTTTTTTTTTTTTTTTTCTTGATACCCTTTAGGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTGAGTCCTTACCATGCATATTGTATTTGAAGAACTTTTTCTTGAATAATATATTGATGCATCTGTTTTAATATTTACAGGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGTATGTTTTTCTTAAATGTTCAAGTACTTGAAGTACATCTATTGATAATTTCTCATAACTGGGAAATGATTGTGATGGTTGGCTGAATGTAGGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGACGCTGAGAAGAATGACATGAAAAGACAGAGAGAACGTATAACTCAATTATTATATATTTTTCCATGTTCAACTGTTTTTGCCTATTATTCTATTCTATTTTTCATGAGGATATGTTATTTTAGTGATTTATGTCTGGTTTGTCACATCAGCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCAATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCGAGGCGACATAGATCTCCTCCAAGGTTGACCATCATCCCCCCACTCTTCAACCCCCTAGCCTCACACACACACACACACAATCTATCTCCTTTCCTGTAAATAGTGGGAGCATTAACATTCTTTAACTTCGGTTGAATAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGGTATTACACATTTGACTGTTATGAGATATCGTAGTATTTTTTCTTGCAGTTTATTTGAATGGTACACAGACATGTTTATTGTTTCTAACTTCACAAATCTTCATATAATGACAAGGTGAACTATTTATGACTTACTGCACGTGTTAAGTTTAATCTTATTGTTTCTGAGTTAAGAGTAAACGTCTGGAGAGTAGTGAATTATGCAGGAGCATATGTTAATATCAATTTTTATTTTGAGCCTTTGTTTTTAGAGTGTGTTTCTTTTATTTTTAGATTTCCAGCTACATCAGGTATTTTGTAGAATAAAAATTGCATCAGGTAACTGTGGTTTTTGGGTGATCCGAGCAAATTCAAAATAATGCTATTTCAGACTTAGAATGAAGTAGCAACCTGAGTTACTCTTGATGTAACTATTTAAGACTCTACTTGCTTCCATTATGGTACAAAGGTGTTCCTGTAGTTTAATCTTAGGCATTAGAAGAATGGTGACTGGGGGCATGATTACTTTCTAATGTTTGAGAAATTTAAGCATTTAAGCATATGGCAGTGGGAGCTTTTAATTGCTTGTTCACTATGGTTGACCCATGGTTTTTACTTGAAAATGATGTAGTCTGACTCAGTGGTCTCACTTATGTTTTTGCTTAGGTATATGAACGTTACTTAACTAAATTATGTTTCTTTCAGTACACCGCCTCGACGTGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGCAGAAGGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGGTAACTTGATGCCTAATGATTTTTTTTTTTTTTTTTTTTTTTGTCATGACCAACTGCCTTTAAAGAAAAAAATATTAGTATCTATGGATGCCTAATGAACTTTTTTTTCATGATCAACTCCCTTTTAAAGAAGAATTATTTCATATTGTTTGCTTGTCCACTCTGCTTGTGGTGCATAAATTAAATGACGAAGTAGACACAGAAGTCCCTACCATTGGCATCGATCAAGAAAGGATAATAGTCATAATAAACCCTTTCTGAACAGCCCCAAGTGAGGGCTATGAAACAAGTTCAAAGATTCTCATCTTCTTTTCAATTGCAGTTTATTTGAAGCAAACTTTGACAGATGTCTGGTGTTGTGGTCTTGGGATTTTATATTACAACAATCCTTAGAAACTAAGCTTAAACGATCTCAAGTTCCTATTTCTTACCTGAAACTTTGTATGTGCGTAATTGGCTATTAGTGGATAACATTTGTTTTGTATAGTTAGCTTTTAGAAAGGATGCGAATAATGTGCATCTGTAGTCATATTGCGTGTTCCATTTGTAGGGATTTTGGTGTGAGAAGTCTTCTTCAATGGCAGGAAAGATCTTATTTTAATGTTTGATCCGTTGTTAAATTCTATGTTTCTCTTTGAACTTTGGCTACTTTGTCAATCTGTAATTACTCGCTAGATCATATTTTATTGGAGTGAGACCCCTTTTTGTAGCTTGTTGCTTGCTTCATATTTCTTCTGGCCTTTTGTTTTGTATGTCCGTGTATTCTTATGGTTCTCTCTATACAGAGGTCGGCCTGCAGCCGCTGGTAGACGTGGGAGATCATCGTCCTACTCTGCATCACCTAGTCCACGCAAGGTTTGCTGTGATTGATCTTGCCATTTTTTTCACCGCTCTGGGTTTATTATTGTTCGTTCTTCCTTGCATCCCGAGTGCCTTCATTGTTCTCTATTTTATATTACAGGTGCCCAGGAGAGTATCTCGCAGTCCAAGAAGGTAATAACTAAAGGTTAGGAATTTTCGATATTCTTGTAGGCCAGTTTGCTGCCCAGTTCAAATCACTTGACTTTTGCATGGACTTTTGCCGTTTCTTTTTAACTAAAGACGAGTGTGTTTCCAAACCCATAAACCACAGAGAGCCACTGCAATTGGATTATTCTATATATCGAGCTTACAGATATCGAGTACAACAAGTCTGGAATGACTTCTGAAAGAAAGTACTTCAATACTTTTGAAGTGTTTTTAAGTTATGTTATGAGATCCTATATCAGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGACATGGAAACCTCTCTCTAGTAGACGTGTGGAAACTTCTCTTAAAACCATGAGGGCTGATGACAATATGTAACGGGTCAAAGTAGACAATATCTACTAGCAGTAGGCTTAGGCTTAGGCTGTTACAAATAACATAAGAGCTAGACACCCGACGGTGTGCCGGCGAAGATGCGAAGATGCTGGGCCCCGAAGGGGAGTGGATTGTGAGATCCCACATTGGTTGGAGAGAAAAACGAAATATTCCTTATAAAAGCATGGAAACCTCTTCTTAGTAGATGCTTTATAAAATCGTGAGGCTGATGGGTTGAAGCAGACAATATCAACTAACAATGGACTTAGGCCCGTTACATATGTGCTCTTGATCATCTAACCAAACATCGAGAACAACCATTATTATAATATACATACGTACATATTTAATTATGTTGTGTGATCGTTTGGTGTATAGGCCTTTAAGAGGGAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGCAAGCCATAA

mRNA sequence

ATGGCTAAGCCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCGGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCTCGAAGCGGTTCTTCTCGAAGCCGAAGCCCTGCTCCTCAAAGAAAGAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCACCTCCACCAGCTAAACGAATTTCTCCGCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATGCACTGAGTAGGAATGTCCATGAGGGTCATTTAAAAGAAATCTTCAGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGACGCTGAGAAGAATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCAATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCGAGGCGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGTACACCGCCTCGACGTGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGCAGAAGGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGAGGTCGGCCTGCAGCCGCTGGTAGACGTGGGAGATCATCGTCCTACTCTGCATCACCTAGTCCACGCAAGGTGCCCAGGAGAGTATCTCGCAGTCCAAGAAGGCCTTTAAGAGGGAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGCAAGCCATAA

Coding sequence (CDS)

ATGGCTAAGCCAAGCAGAGGCCGTCGTTCGCCGCCGTCGGGTTCGGGATCCTCCTCACGTTCCCGCTCATACTCCGGCTCTGGTTCCGGCTCCAGTTCCCGCTCGCGCTCCAGGTCTGCATCTGTGTCCCGCTCCCGCTCTCGTTCCAGGTCCATTTCCTCGTCTTCGTCTCTATCTCGAAGCGGTTCTTCTCGAAGCCGAAGCCCTGCTCCTCAAAGAAAGAGTCCGAATGAAACAGCTCGGCGGACTCGCGCTTCACCTCCACCAGCTAAACGAATTTCTCCGCCACCCAGGAAACCATCTCCTGTACGCGAGTCACTTGTTCTTCACATTGATGCACTGAGTAGGAATGTCCATGAGGGTCATTTAAAAGAAATCTTCAGTAATTTTGGTGAAGTAGTCCATGTTGAGCTGGCAATGGATCGCACAGTCAACCTTCCTAAAGGATATGGATATGTTGAATTCAAAACAAGACCTGATGCTGAAAAAGCCCAATTGCATATGGATGGTGCCCAAATTGATGGGAATGTTATTCGAACAAGATTTACATTGCCTCAAAGACAGAAGATCCCAACACCTCCAAGGACTGTAGCAACCGCTCCAAAGAGAGATGGTCCTAAGCCTGAAAATGTTGGTGCTGACGCTGAGAAGAATGACATGAAAAGACAGAGAGAACCTTCACCTCGTCGAAAGCCTCCTTCTCCTAGAAGACGCTCGCCTATTGCTCGACGAGGTGGGTCTCCTAGAAGACAACCCAATTCTCCTCGCCGCCGTCCAGAGTCTCCTCCGCGTCGCCGCTTAGAATCTCCCCCTAGAAGGAGGCCTGCATCACCCATGAGAGGTGGCCGTTCTCCATCGCCTTTGGCGAGGCGACATAGATCTCCTCCAAGGCCCTCTCCAAGAAGAATTCGTGACAGTCCTGTTCGAAGACGTTCACCACCCCCTCCTAGGCGCCGTACACCGCCTCGACGTGCTCGTAGTCCTCCCAGAAGGTCTCCAGTAGTTCGCAGAAGGAGCCGTTCACCTATTAGAAGACCAGCTCGATCACGTTCCCGATCATCTTCACCACGGAGAGGTCGGCCTGCAGCCGCTGGTAGACGTGGGAGATCATCGTCCTACTCTGCATCACCTAGTCCACGCAAGGTGCCCAGGAGAGTATCTCGCAGTCCAAGAAGGCCTTTAAGAGGGAGAAGCAGCAGCAGGAGCAGTAGCAGTAGTTCTCCACCCCGCAAGCCATAA

Protein sequence

MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHEGHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGRPAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP

Homology

[Close]

BLAST of Csor.00g227450 vs. ExPASy Swiss-Prot
Match: Q9SEE9 (Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR45 PE=1 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 1.5e-108
Identity = 289/420 (68.81%), Postives = 330/420 (78.57%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRS PS SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRS-PSVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           S SS SRSP  + KSP   ARR R+ PPP  + +  P K + V+ESLVLH+D+LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
            HLKEIF NFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKN-DMKRQREPSPRRKPP-SPRRR 240
            FTLP RQK+ +PP+ V+ APKRD PK +N  ADAEK+   +R RE SP+RK   SPRRR
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRR 240

Query: 241 SPIARRGGSPRRQ-PNSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPP 300
           SP+ RRG SPRR+ P+SP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPP
Sbjct: 241 SPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPP 300

Query: 301 RPSPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSS 360
           R SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP RSRS S S
Sbjct: 301 RGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSIS 360

Query: 361 PRRGRPAAAGRRGRSSSYSASPSPRKVPRRV--SRSPRRPLRG-RSSSRSSSSSSPPRKP 413
           PR+GR   AGRRGRSSSYS+SPSPR++PR++  SRSP+RPLRG RSSS SSSSSSPP  P
Sbjct: 361 PRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPP 409

[Close]

BLAST of Csor.00g227450 vs. ExPASy Swiss-Prot
Match: Q15287 (RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-20
Identity = 110/258 (42.64%), Postives = 146/258 (56.59%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SS+RSRS S S SGSS+ + S S S S S S SRS SSS+S S S SS
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRSSSSSS 121

Query: 65  RSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHEGHLK 124
            S SP+P R+  ++  RR+R+   P KR     ++ SP  +   +HI  L+RNV + H+ 
Sbjct: 122 SSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 181

Query: 125 EIFSNFGEVVHVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
           EIFS +G++  +++ ++R   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 182 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 241

Query: 185 LPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIAR 244
           L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSP+ R
Sbjct: 242 L---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 301

Query: 245 RGGSPRRQPNSPRRRPES 262
           R  SP R+ +  R    S
Sbjct: 302 RSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Csor.00g227450 vs. ExPASy Swiss-Prot
Match: Q4R5N1 (RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=RNPS1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-20
Identity = 110/258 (42.64%), Postives = 146/258 (56.59%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SS+RSRS S S SGSS+ + S S S S S S SRS SSS+S S S SS
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRSSSSSS 121

Query: 65  RSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHEGHLK 124
            S SP+P R+  ++  RR+R+   P KR     ++ SP  +   +HI  L+RNV + H+ 
Sbjct: 122 SSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 181

Query: 125 EIFSNFGEVVHVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
           EIFS +G++  +++ ++R   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 182 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 241

Query: 185 LPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIAR 244
           L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSP+ R
Sbjct: 242 L---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 301

Query: 245 RGGSPRRQPNSPRRRPES 262
           R  SP R+ +  R    S
Sbjct: 302 RSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Csor.00g227450 vs. ExPASy Swiss-Prot
Match: Q99M28 (RNA-binding protein with serine-rich domain 1 OS=Mus musculus OX=10090 GN=Rnps1 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-20
Identity = 110/258 (42.64%), Postives = 146/258 (56.59%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SS+RSRS S S SGSS+ + S S S S S S SRS SSS+S S S SS
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRSSSSSS 121

Query: 65  RSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHEGHLK 124
            S SP+P R+  ++  RR+R+   P KR     ++ SP  +   +HI  L+RNV + H+ 
Sbjct: 122 SSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 181

Query: 125 EIFSNFGEVVHVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
           EIFS +G++  +++ ++R   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 182 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 241

Query: 185 LPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIAR 244
           L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSP+ R
Sbjct: 242 L---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 301

Query: 245 RGGSPRRQPNSPRRRPES 262
           R  SP R+ +  R    S
Sbjct: 302 RSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Csor.00g227450 vs. ExPASy Swiss-Prot
Match: Q5NVM8 (RNA-binding protein with serine-rich domain 1 OS=Pongo abelii OX=9601 GN=RNPS1 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 1.6e-20
Identity = 110/258 (42.64%), Postives = 146/258 (56.59%), Query Frame = 0


Query: 5   SRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSRSGSS 64
           +R RRS  SGS SS+RSRS S S SGSS+ + S S S S S S SRS SSS+S S S SS
Sbjct: 62  TRKRRSASSGS-SSTRSRSSSTSSSGSSTSTGSSSGSSSSSAS-SRSGSSSTSRSSSSSS 121

Query: 65  RSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHEGHLK 124
            S SP+P R+  ++  RR+R+   P KR     ++ SP  +   +HI  L+RNV + H+ 
Sbjct: 122 SSGSPSPSRRR-HDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIM 181

Query: 125 EIFSNFGEVVHVELAMDRT-VNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRTRFT 184
           EIFS +G++  +++ ++R   +L KGY YVEF+   +AEKA  HMDG QIDG  I     
Sbjct: 182 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAV 241

Query: 185 LPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIAR 244
           L      P PP    + P+R  P P           M R+  P  RR+  SPRRRSP+ R
Sbjct: 242 L---APWPRPPPRRFSPPRRMLPPP----------PMWRRSPPRMRRRSRSPRRRSPVRR 301

Query: 245 RGGSPRRQPNSPRRRPES 262
           R  SP R+ +  R    S
Sbjct: 302 RSRSPGRRRHRSRSSSNS 303

[Close]

BLAST of Csor.00g227450 vs. NCBI nr
Match: KAG6591837.1 (Serine/arginine-rich splicing factor SR45, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 699 bits (1804), Expect = 8.65e-252
Identity = 412/412 (100.00%), Postives = 412/412 (100.00%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360

Query: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
           PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412

[Close]

BLAST of Csor.00g227450 vs. NCBI nr
Match: XP_023536426.1 (serine/arginine-rich splicing factor SR45-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 690 bits (1780), Expect = 3.91e-248
Identity = 407/412 (98.79%), Postives = 410/412 (99.51%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGS SSSRSRSRSASVSRSRSRS+SISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSKSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SG+SRSRSP PQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGTSRSRSPPPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQP+SPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360

Query: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
           PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412

[Close]

BLAST of Csor.00g227450 vs. NCBI nr
Match: XP_022936958.1 (serine/arginine-rich splicing factor SR45-like [Cucurbita moschata])

HSP 1 Score: 683 bits (1763), Expect = 1.46e-245
Identity = 407/412 (98.79%), Postives = 408/412 (99.03%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSS RSRSYSGSGS SSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSS-RSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQP+SPRRRPESPPRRRLESPPRRRPASPMRG RSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGCRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360

Query: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
           PAAAGRRGRS SYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 PAAAGRRGRSPSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 411

[Close]

BLAST of Csor.00g227450 vs. NCBI nr
Match: KAG7024701.1 (RNA-binding protein with serine-rich domain 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 676 bits (1745), Expect = 6.45e-243
Identity = 404/412 (98.06%), Postives = 405/412 (98.30%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           G       NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 G-------NFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQP+SPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360

Query: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
           PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 405

[Close]

BLAST of Csor.00g227450 vs. NCBI nr
Match: XP_022976788.1 (serine/arginine-rich splicing factor SR45-like [Cucurbita maxima])

HSP 1 Score: 676 bits (1744), Expect = 1.19e-242
Identity = 402/412 (97.57%), Postives = 406/412 (98.54%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGS SSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SG+SRSRSPAPQRKSPNETARRTRAS P AKRISPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATA KRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQP+SPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRSSSPRRG+
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRRGQ 360

Query: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
           PAAAGRRGRSSSYSASPSPRKVPRRV RSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 PAAAGRRGRSSSYSASPSPRKVPRRVYRSPRRPLRGRSSSRSSSSSSPPRKP 412

[Close]

BLAST of Csor.00g227450 vs. ExPASy TrEMBL
Match: A0A6J1FEP9 (serine/arginine-rich splicing factor SR45-like OS=Cucurbita moschata OX=3662 GN=LOC111443390 PE=4 SV=1)

HSP 1 Score: 683 bits (1763), Expect = 7.08e-246
Identity = 407/412 (98.79%), Postives = 408/412 (99.03%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSS RSRSYSGSGS SSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSS-RSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQP+SPRRRPESPPRRRLESPPRRRPASPMRG RSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGCRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360

Query: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
           PAAAGRRGRS SYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 PAAAGRRGRSPSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 411

[Close]

BLAST of Csor.00g227450 vs. ExPASy TrEMBL
Match: A0A6J1IN70 (serine/arginine-rich splicing factor SR45-like OS=Cucurbita maxima OX=3661 GN=LOC111477064 PE=4 SV=1)

HSP 1 Score: 676 bits (1744), Expect = 5.75e-243
Identity = 402/412 (97.57%), Postives = 406/412 (98.54%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRSYSGSGS SSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SG+SRSRSPAPQRKSPNETARRTRAS P AKRISPPPRKPSPVRESLVLHID LSRNVHE
Sbjct: 61  SGTSRSRSPAPQRKSPNETARRTRASSPLAKRISPPPRKPSPVRESLVLHIDPLSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT
Sbjct: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQKIPTPPRTVATA KRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKIPTPPRTVATASKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           IARRGGSPRRQP+SPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP
Sbjct: 241 IARRGGSPRRQPDSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360
           RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRR+SRSPIRRPARSRSRSSSPRRG+
Sbjct: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRKSRSPIRRPARSRSRSSSPRRGQ 360

Query: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
           PAAAGRRGRSSSYSASPSPRKVPRRV RSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 PAAAGRRGRSSSYSASPSPRKVPRRVYRSPRRPLRGRSSSRSSSSSSPPRKP 412

[Close]

BLAST of Csor.00g227450 vs. ExPASy TrEMBL
Match: A0A0A0KZM9 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV=1)

HSP 1 Score: 645 bits (1663), Expect = 1.60e-230
Identity = 387/419 (92.36%), Postives = 399/419 (95.23%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGS SSSRSRS+SGS S SSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSASSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSRSP PQRKSP ETARR+RASPPPAKR SPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRSPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHL+EIFSNFGEVV+VELAMDRTVNLPKGYGYVEFKTR DAEKAQ++MDGAQIDGNVIR 
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQK+PTPPRTVAT PKRDGPKPENVG DAEK+DMKRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVPKRDGPKPENVGPDAEKDDMKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESP-------PRRRPASPMRGGRSPSPLARRHR 300
           +ARRGGSPRRQP+SPRRRP+SPPRRR+ESP       PRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPDSPPRRRIESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360
           SPPRPSPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

Query: 361 SSPRRGRPAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
            SPRRGRP AAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 FSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419

[Close]

BLAST of Csor.00g227450 vs. ExPASy TrEMBL
Match: A0A1S3CPA3 (serine/arginine-rich splicing factor SR45 OS=Cucumis melo OX=3656 GN=LOC103503047 PE=4 SV=1)

HSP 1 Score: 637 bits (1642), Expect = 2.52e-227
Identity = 385/419 (91.89%), Postives = 397/419 (94.75%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPSGSGSSSRSRS+SGS S SSSRSRSRSASVSRSRSRSRSISSSSSLSR
Sbjct: 1   MAKPSRGRRSPPSGSGSSSRSRSFSGSDSRSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           SGSSRSR+P PQRKSP ETARR+RASPPPAKR SPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SGSSRSRTPPPQRKSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHL+EIFSNFGEVV+VELAMDRTVNLPKGYGYVEFKTR DAEKAQ++MDGAQIDGNVIR 
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQK+PTPPRTVAT  KRDGPKPENVG DAEK+DMKRQRE SPRRK PSPRRRSP
Sbjct: 181 RFTLPQRQKMPTPPRTVATVSKRDGPKPENVGPDAEKDDMKRQRESSPRRKLPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESP-------PRRRPASPMRGGRSPSPLARRHR 300
           +ARRGGSPRRQP+SPRRRPESPPRRR+ESP       PRRRPASPMRGGRSPSPLARRHR
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRVESPFRRDSPPPRRRPASPMRGGRSPSPLARRHR 300

Query: 301 SPPRPSPRRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360
           SPPRPSPRRIR SPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS
Sbjct: 301 SPPRPSPRRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRS 360

Query: 361 SSPRRGRPAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
            SPRRGRP AAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 FSPRRGRPGAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 419

[Close]

BLAST of Csor.00g227450 vs. ExPASy TrEMBL
Match: A0A6J1FJN7 (serine/arginine-rich splicing factor SR45-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111445960 PE=4 SV=1)

HSP 1 Score: 616 bits (1589), Expect = 2.11e-219
Identity = 374/412 (90.78%), Postives = 386/412 (93.69%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRSPPS SGSSSRSRSYSGS S SSSRSRSRS SVS S SRS  ISSSSS SR
Sbjct: 1   MAKPSRGRRSPPSRSGSSSRSRSYSGSDSRSSSRSRSRSRSVSVSHSRS--ISSSSSPSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           S SSRSRSP PQRKS  ETARRTRASPPPAKR SPPPRKPSPVRESLVLHIDALSRNVHE
Sbjct: 61  SASSRSRSPPPQRKSSTETARRTRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
           GHL+EIFSNFGEVV+VELAMDRTVNLPKGYGYVEFKTR DAEKAQ++MDGAQIDGNVIR 
Sbjct: 121 GHLREIFSNFGEVVNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDGAQIDGNVIRA 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
           RFTLPQRQK+ +PPRT A A KRDGPKPENVGADAEK+D+KRQREPSPRRKPPSPRRRSP
Sbjct: 181 RFTLPQRQKMASPPRTAAAASKRDGPKPENVGADAEKDDLKRQREPSPRRKPPSPRRRSP 240

Query: 241 IARRGGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSP 300
           +ARRGGSPRRQP+SPRRRPESPPRRR++SPPRRRPASPMRGGRSPSPL RRHRSPPRPSP
Sbjct: 241 VARRGGSPRRQPDSPRRRPESPPRRRVDSPPRRRPASPMRGGRSPSPLGRRHRSPPRPSP 300

Query: 301 RRIRDSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPRRGR 360
           RRIR SPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRP RSRSRS SPRRGR
Sbjct: 301 RRIRGSPVRRRSPPPPRRRTPPRRARSPPRRSPVVRRRSRSPIRRPGRSRSRSFSPRRGR 360

Query: 361 PAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRKP 412
           P AAGRRGRSSSYSASPSPRKV RRVSRSPRRPLRGRSSSRSSSSSSPPRKP
Sbjct: 361 PGAAGRRGRSSSYSASPSPRKVARRVSRSPRRPLRGRSSSRSSSSSSPPRKP 410

[Close]

BLAST of Csor.00g227450 vs. TAIR 10
Match: AT1G16610.1 (arginine/serine-rich 45 )

HSP 1 Score: 394.4 bits (1012), Expect = 1.1e-109
Identity = 289/420 (68.81%), Postives = 330/420 (78.57%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRS PS SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRS-PSVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           S SS SRSP  + KSP   ARR R+ PPP  + +  P K + V+ESLVLH+D+LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
            HLKEIF NFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKN-DMKRQREPSPRRKPP-SPRRR 240
            FTLP RQK+ +PP+ V+ APKRD PK +N  ADAEK+   +R RE SP+RK   SPRRR
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRR 240

Query: 241 SPIARRGGSPRRQ-PNSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPP 300
           SP+ RRG SPRR+ P+SP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPP
Sbjct: 241 SPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPP 300

Query: 301 RPSPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSS 360
           R SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP RSRS S S
Sbjct: 301 RGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSIS 360

Query: 361 PRRGRPAAAGRRGRSSSYSASPSPRKVPRRV--SRSPRRPLRG-RSSSRSSSSSSPPRKP 413
           PR+GR   AGRRGRSSSYS+SPSPR++PR++  SRSP+RPLRG RSSS SSSSSSPP  P
Sbjct: 361 PRKGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPP 409

[Close]

BLAST of Csor.00g227450 vs. TAIR 10
Match: AT1G16610.2 (arginine/serine-rich 45 )

HSP 1 Score: 387.9 bits (995), Expect = 1.0e-107
Identity = 285/418 (68.18%), Postives = 326/418 (77.99%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRS PS SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRS-PSVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           S SS SRSP  + KSP   ARR R+ PPP  + +  P K + V+ESLVLH+D+LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
            HLKEIF NFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSP 240
            FTLP RQK+ +PP+ V+ APKRD PK +N  ADAEK+   R+    PR +  SPRRRSP
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRR----PRER-LSPRRRSP 240

Query: 241 IARRGGSPRRQ-PNSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRP 300
           + RRG SPRR+ P+SP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPPR 
Sbjct: 241 LPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPPRG 300

Query: 301 SPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSSPR 360
           SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP RSRS S SPR
Sbjct: 301 SPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSISPR 360

Query: 361 RGRPAAAGRRGRSSSYSASPSPRKVPRRV--SRSPRRPLRG-RSSSRSSSSSSPPRKP 413
           +GR   AGRRGRSSSYS+SPSPR++PR++  SRSP+RPLRG RSSS SSSSSSPP  P
Sbjct: 361 KGR-GPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPP 402

[Close]

BLAST of Csor.00g227450 vs. TAIR 10
Match: AT1G16610.3 (arginine/serine-rich 45 )

HSP 1 Score: 387.1 bits (993), Expect = 1.8e-107
Identity = 288/430 (66.98%), Postives = 329/430 (76.51%), Query Frame = 0


Query: 1   MAKPSRGRRSPPSGSGSSSRSRSYSGSGSGSSSRSRSRSASVSRSRSRSRSISSSSSLSR 60
           MAKPSRGRRS PS SGSSSRS S S SGS       S S S+SRSRSRSRS+SSSSS SR
Sbjct: 1   MAKPSRGRRS-PSVSGSSSRSSSRSRSGS-------SPSRSISRSRSRSRSLSSSSSPSR 60

Query: 61  SGSSRSRSPAPQRKSPNETARRTRASPPPAKRISPPPRKPSPVRESLVLHIDALSRNVHE 120
           S SS SRSP  + KSP   ARR R+ PPP  + +  P K + V+ESLVLH+D+LSRNV+E
Sbjct: 61  SVSSGSRSPPRRGKSPAGPARRGRSPPPPPSKGASSPSKKA-VQESLVLHVDSLSRNVNE 120

Query: 121 GHLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRPDAEKAQLHMDGAQIDGNVIRT 180
            HLKEIF NFGEV+HVE+AMDR VNLP+G+GYVEFK R DAEKAQL+MDGAQIDG V++ 
Sbjct: 121 AHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKA 180

Query: 181 RFTLPQRQKIPTPPRTVATAPKRDGPKPENVGADAEKN-DMKRQREPSPRRKPP-SPRRR 240
            FTLP RQK+ +PP+ V+ APKRD PK +N  ADAEK+   +R RE SP+RK   SPRRR
Sbjct: 181 TFTLPPRQKVSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRR 240

Query: 241 SPIARRGGSPRRQ-PNSP-RRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPP 300
           SP+ RRG SPRR+ P+SP RRRP SP RRR ++PPRRRPASP RG    SP  RR+RSPP
Sbjct: 241 SPLPRRGLSPRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPP 300

Query: 301 RPSPRRIRDSPVRRRSPPPPRRRT-PPRRARSPPRRSPVVRRRSRSPIRRPARSRSRSSS 360
           R SPRRIR SPVRRRSP P RRR+ PPRR RSPPRRSP +RRRSRSPIRRP RSRS S S
Sbjct: 301 RGSPRRIRGSPVRRRSPLPLRRRSPPPRRLRSPPRRSP-IRRRSRSPIRRPGRSRSSSIS 360

Query: 361 PRR----------GRPAAAGRRGRSSSYSASPSPRKVPRRV--SRSPRRPLRG-RSSSRS 413
           PR+          G    AGRRGRSSSYS+SPSPR++PR++  SRSP+RPLRG RSSS S
Sbjct: 361 PRKYVGTHLNFFLGGRGPAGRRGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNS 420

[Close]

BLAST of Csor.00g227450 vs. TAIR 10
Match: AT2G29210.1 (splicing factor PWI domain-containing protein )

HSP 1 Score: 46.6 bits (109), Expect = 5.6e-05
Identity = 96/237 (40.51%), Postives = 114/237 (48.10%), Query Frame = 0


Query: 185 PQRQKIPTPPRTVATAPKRDGPKPENVGADAEKNDMKRQREPSPRRKPPSPRRRSPIARR 244
           P+R++I +P R+ + +P R   +P + G        +R+R PS    PP+ RRRSP    
Sbjct: 272 PRRRRIHSPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPS----PPARRRRSP---- 331

Query: 245 GGSPRRQPNSPRRRPESPPRRRLESPPRRRPASPMRGGRSPSPLARRHRSPPRPSPRRIR 304
                  P + RRR  SPP RR      R P  P R  RSPSP ARRHRSPP    RR  
Sbjct: 332 ------SPPARRRRSPSPPARR-----HRSPTPPARQRRSPSPPARRHRSPPPARRRRSP 391

Query: 305 DSPVRRR---SPPPPRRRTPP---RRARSPPRRSPVVRR-RSRSPIRRPARSRS--RSSS 364
             P RRR   SPP  RRR+P    RR RSP   SP+ RR RSRSP+ +  RS S  RS S
Sbjct: 392 SPPARRRRSPSPPARRRRSPSPLYRRNRSP---SPLYRRNRSRSPLAKRGRSDSPGRSPS 451

Query: 365 P-RRGRPAAAGRRGRSSSYSASPSPRKVPRRVSRSPRRPLRGRSSSRSSSSSSPPRK 412
           P  R R     R    S     PSP    R  S  PRR             S PPR+
Sbjct: 452 PVARLRDPTGARLPSPSIEQRLPSPPVAQRLPSPPPRRAGLPSPPPAQRLPSPPPRR 486

The following BLAST results are available for this feature:

BLAST of Csor.00g227450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SEE9	1.5e-108	68.81	Serine/arginine-rich splicing factor SR45 OS=Arabidopsis thaliana OX=3702 GN=SR4...	[more]
Q15287	1.6e-20	42.64	RNA-binding protein with serine-rich domain 1 OS=Homo sapiens OX=9606 GN=RNPS1 P...	[more]
Q4R5N1	1.6e-20	42.64	RNA-binding protein with serine-rich domain 1 OS=Macaca fascicularis OX=9541 GN=...	[more]
Q99M28	1.6e-20	42.64	RNA-binding protein with serine-rich domain 1 OS=Mus musculus OX=10090 GN=Rnps1 ...	[more]
Q5NVM8	1.6e-20	42.64	RNA-binding protein with serine-rich domain 1 OS=Pongo abelii OX=9601 GN=RNPS1 P...	[more]

BLAST of Csor.00g227450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6591837.1	8.65e-252	100.00	Serine/arginine-rich splicing factor SR45, partial [Cucurbita argyrosperma subsp...	[more]
XP_023536426.1	3.91e-248	98.79	serine/arginine-rich splicing factor SR45-like [Cucurbita pepo subsp. pepo]	[more]
XP_022936958.1	1.46e-245	98.79	serine/arginine-rich splicing factor SR45-like [Cucurbita moschata]	[more]
KAG7024701.1	6.45e-243	98.06	RNA-binding protein with serine-rich domain 1 [Cucurbita argyrosperma subsp. arg...	[more]
XP_022976788.1	1.19e-242	97.57	serine/arginine-rich splicing factor SR45-like [Cucurbita maxima]	[more]

BLAST of Csor.00g227450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FEP9	7.08e-246	98.79	serine/arginine-rich splicing factor SR45-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1IN70	5.75e-243	97.57	serine/arginine-rich splicing factor SR45-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A0A0KZM9	1.60e-230	92.36	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G607050 PE=4 SV...	[more]
A0A1S3CPA3	2.52e-227	91.89	serine/arginine-rich splicing factor SR45 OS=Cucumis melo OX=3656 GN=LOC10350304...	[more]
A0A6J1FJN7	2.11e-219	90.78	serine/arginine-rich splicing factor SR45-like isoform X2 OS=Cucurbita moschata ...	[more]

BLAST of Csor.00g227450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16610.1	1.1e-109	68.81	arginine/serine-rich 45	[more]
AT1G16610.2	1.0e-107	68.18	arginine/serine-rich 45	[more]
AT1G16610.3	1.8e-107	66.98	arginine/serine-rich 45	[more]
AT2G29210.1	5.6e-05	40.51	splicing factor PWI domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 108..181 e-value: 9.5E-18 score: 75.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 111..179 e-value: 1.5E-14 score: 53.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 107..185 score: 15.596196
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 9..190 e-value: 4.7E-23 score: 83.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 396..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..104
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 183..412
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 253..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..232
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 313..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..76
None	No IPR available	PANTHER	PTHR15481:SF9	BNAA09G56240D PROTEIN	coord: 25..404
None	No IPR available	PANTHER	PTHR15481	RIBONUCLEIC ACID BINDING PROTEIN S1	coord: 25..404
IPR034201	RNPS1, RNA recognition motif	CDD	cd12365	RRM_RNPS1	coord: 109..181 e-value: 1.70082E-37 score: 128.827
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 88..197

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g227450.m01	Csor.00g227450.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding