Csor.00g226760 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g226760
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionTransmembrane protein
LocationCsor_Chr09: 4146020 .. 4146838 (+)
RNA-Seq ExpressionCsor.00g226760
SyntenyCsor.00g226760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAAGCCAAGAACAAGTGAAGCATCTTGAGGAGTGCTCAGTTTCAAAGTAAGTAAGCTCTCTCCTCCTACCTTTTCTCTTACACGGCTTTAGACTTGAAAATGAAGAATTTCTCTTGAATCTTATATTATTAGCATCATCTTGTTGTGCAAATAAATCCCAAATTGCTTATCATAAAATTTGAGCAGAATTTTCCTAAACCCAGGGAGAATCCCATTGTTTGTGTTTCTGGATCAAATGGAAGCAGAAACTTTGTTCGAAACGTTGTGTCAAACGTTTTAACTTTTTGGTAGTCACGGTTTAAATTCTGGTGAGTATGACCATTCGAGCACCGTGTGAGATCCCACATCGGTGGGAGAGGGGAACAAAACATACTCTATAAGGGTGTGAAAACATCTCCCTAGCAAACGCATTCTAAAACCGTGAGATTGATGGCGATACGTAATGGGCCAAAGCGGACAATATCTGCTAGCAGTGAACTTGGGCTATAATACACCATGTTTCGTTTTTTTTTTTTTTTTTTTTTTGTTCTTTCAACTGGATTTTCTCTTGAGATTTGATTGATTATTGTGCATTCCACAGTGCGCTGGGCACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAGTCACTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATCAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAAGCCCAAAACTCTGCAGCCGAAGCTTCTGTTAACCAATCTGAGTCCCTTTCTTGA

mRNA sequence

ATGGGAAGCCAAGAACAAGTGAAGCATCTTGAGGAGTGCTCAGTTTCAAATGCGCTGGGCACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAGTCACTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATCAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAAGCCCAAAACTCTGCAGCCGAAGCTTCTGTTAACCAATCTGAGTCCCTTTCTTGA

Coding sequence (CDS)

ATGGGAAGCCAAGAACAAGTGAAGCATCTTGAGGAGTGCTCAGTTTCAAATGCGCTGGGCACTTGGGTATTCTCAGTAGCAGGAGCGTTGCTAGCAATTCCAGTGGGAATAAAGAGGAAGTCACTGGCACCCCTTGTGTTTTTTGGCACAACTGGTACAATGCTTGATATCATAATGGGAATCAGTGCCTGTGAAAGAGAACATGCTGAGCGTCAAATGAAGCTATTAGAAGCCCAAAACTCTGCAGCCGAAGCTTCTGTTAACCAATCTGAGTCCCTTTCTTGA

Protein sequence

MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMGISACEREHAERQMKLLEAQNSAAEASVNQSESLS
Homology
BLAST of Csor.00g226760 vs. NCBI nr
Match: KAG6591905.1 (hypothetical protein SDJN03_14251, partial [Cucurbita argyrosperma subsp. sororia] >KAG7024778.1 hypothetical protein SDJN02_13596, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 178 bits (451), Expect = 4.63e-56
Identity = 94/94 (100.00%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSESLS 94
          ISACEREHAERQMKLLEAQNSAAEASVNQSESLS
Sbjct: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSESLS 94

BLAST of Csor.00g226760 vs. NCBI nr
Match: XP_022937150.1 (uncharacterized protein LOC111443534 [Cucurbita moschata] >XP_023536610.1 uncharacterized protein LOC111797732 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 177 bits (448), Expect = 1.33e-55
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSESLS 94
          ISACEREHAERQMKLLEAQNSAAEASVN+SESLS
Sbjct: 61 ISACEREHAERQMKLLEAQNSAAEASVNESESLS 94

BLAST of Csor.00g226760 vs. NCBI nr
Match: XP_022976612.1 (uncharacterized protein LOC111476955 [Cucurbita maxima])

HSP 1 Score: 176 bits (447), Expect = 1.89e-55
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSESLS 94
          +SACEREHAERQMKLLEAQNSAAEASVN+SESLS
Sbjct: 61 VSACEREHAERQMKLLEAQNSAAEASVNESESLS 94

BLAST of Csor.00g226760 vs. NCBI nr
Match: XP_022138625.1 (uncharacterized protein LOC111009737 [Momordica charantia])

HSP 1 Score: 165 bits (418), Expect = 5.01e-51
Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGS E VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSHENVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSES 92
          ISACEREHAERQMKLLEAQNSAA+ASV  SES
Sbjct: 61 ISACEREHAERQMKLLEAQNSAADASVADSES 92

BLAST of Csor.00g226760 vs. NCBI nr
Match: XP_038899123.1 (uncharacterized protein LOC120086511 [Benincasa hispida] >XP_038899124.1 uncharacterized protein LOC120086511 [Benincasa hispida] >XP_038899125.1 uncharacterized protein LOC120086511 [Benincasa hispida])

HSP 1 Score: 165 bits (417), Expect = 7.34e-51
Identity = 88/93 (94.62%), Postives = 90/93 (96.77%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQE VKH+EECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQENVKHIEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLE-AQNSAAEASVNQSES 92
          ISACEREHAERQMKLLE AQNSAAEAS+N SES
Sbjct: 61 ISACEREHAERQMKLLEEAQNSAAEASLNDSES 93

BLAST of Csor.00g226760 vs. ExPASy TrEMBL
Match: A0A6J1FFR1 (uncharacterized protein LOC111443534 OS=Cucurbita moschata OX=3662 GN=LOC111443534 PE=4 SV=1)

HSP 1 Score: 177 bits (448), Expect = 6.42e-56
Identity = 93/94 (98.94%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSESLS 94
          ISACEREHAERQMKLLEAQNSAAEASVN+SESLS
Sbjct: 61 ISACEREHAERQMKLLEAQNSAAEASVNESESLS 94

BLAST of Csor.00g226760 vs. ExPASy TrEMBL
Match: A0A6J1IG79 (uncharacterized protein LOC111476955 OS=Cucurbita maxima OX=3661 GN=LOC111476955 PE=4 SV=1)

HSP 1 Score: 176 bits (447), Expect = 9.13e-56
Identity = 92/94 (97.87%), Postives = 94/94 (100.00%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSESLS 94
          +SACEREHAERQMKLLEAQNSAAEASVN+SESLS
Sbjct: 61 VSACEREHAERQMKLLEAQNSAAEASVNESESLS 94

BLAST of Csor.00g226760 vs. ExPASy TrEMBL
Match: A0A6J1C9Z5 (uncharacterized protein LOC111009737 OS=Momordica charantia OX=3673 GN=LOC111009737 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 2.43e-51
Identity = 87/92 (94.57%), Postives = 88/92 (95.65%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGS E VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGSHENVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSES 92
          ISACEREHAERQMKLLEAQNSAA+ASV  SES
Sbjct: 61 ISACEREHAERQMKLLEAQNSAADASVADSES 92

BLAST of Csor.00g226760 vs. ExPASy TrEMBL
Match: A0A6A1UYF7 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G010698 PE=4 SV=1)

HSP 1 Score: 164 bits (415), Expect = 6.96e-51
Identity = 84/89 (94.38%), Postives = 87/89 (97.75%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MG QE VKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGDQETVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQ 89
          ISACEREHAERQMKLLEAQNSAA+AS+N+
Sbjct: 61 ISACEREHAERQMKLLEAQNSAADASLNE 89

BLAST of Csor.00g226760 vs. ExPASy TrEMBL
Match: A0A0B2PI48 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_038894 PE=4 SV=1)

HSP 1 Score: 160 bits (404), Expect = 3.31e-49
Identity = 81/91 (89.01%), Postives = 87/91 (95.60%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MG +E VKHLE+CSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG
Sbjct: 1  MGGEENVKHLEDCSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVNQSE 91
          ISACEREHAERQMKLLEAQN+AAE S+ ++E
Sbjct: 61 ISACEREHAERQMKLLEAQNAAAETSLGETE 91

BLAST of Csor.00g226760 vs. TAIR 10
Match: AT1G21930.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G42150.3); Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 139.4 bits (350), Expect = 1.5e-33
Identity = 72/98 (73.47%), Postives = 81/98 (82.65%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQE VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1  MGSQENVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 61 ISACEREHAERQMKLLEAQNSAAEASVN----QSESLS 95
          +S CEREHAE QMKLL+   +A   + N    +S S+S
Sbjct: 61 VSQCEREHAEHQMKLLQDSQNATTTTTNTETEESSSMS 98

BLAST of Csor.00g226760 vs. TAIR 10
Match: AT3G42150.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32
Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1  MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 61 ISACEREHAERQMKLL-EAQNSAAEASVNQSES 93
          +S CEREHAE Q KLL ++QN+    +   +E+
Sbjct: 61 VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

BLAST of Csor.00g226760 vs. TAIR 10
Match: AT3G42150.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 42 Blast hits to 42 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32
Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1  MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 61 ISACEREHAERQMKLL-EAQNSAAEASVNQSES 93
          +S CEREHAE Q KLL ++QN+    +   +E+
Sbjct: 61 VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

BLAST of Csor.00g226760 vs. TAIR 10
Match: AT3G42150.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21930.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32
Identity = 68/93 (73.12%), Postives = 79/93 (84.95%), Query Frame = 0

Query: 1  MGSQEQVKHLEECSVSNALGTWVFSVAGALLAIPVGIKRKSLAPLVFFGTTGTMLDIIMG 60
          MGSQ+ VKHLEEC+VSNALGTWVFSV GAL+AIPVGIKRKSL PLVFFGTTGTMLDII+G
Sbjct: 1  MGSQKNVKHLEECTVSNALGTWVFSVLGALVAIPVGIKRKSLGPLVFFGTTGTMLDIIIG 60

Query: 61 ISACEREHAERQMKLL-EAQNSAAEASVNQSES 93
          +S CEREHAE Q KLL ++QN+    +   +E+
Sbjct: 61 VSQCEREHAEHQTKLLQDSQNATTTTTTTNTET 93

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6591905.14.63e-56100.00hypothetical protein SDJN03_14251, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022937150.11.33e-5598.94uncharacterized protein LOC111443534 [Cucurbita moschata] >XP_023536610.1 unchar... [more]
XP_022976612.11.89e-5597.87uncharacterized protein LOC111476955 [Cucurbita maxima][more]
XP_022138625.15.01e-5194.57uncharacterized protein LOC111009737 [Momordica charantia][more]
XP_038899123.17.34e-5194.62uncharacterized protein LOC120086511 [Benincasa hispida] >XP_038899124.1 unchara... [more]
Match NameE-valueIdentityDescription
A0A6J1FFR16.42e-5698.94uncharacterized protein LOC111443534 OS=Cucurbita moschata OX=3662 GN=LOC1114435... [more]
A0A6J1IG799.13e-5697.87uncharacterized protein LOC111476955 OS=Cucurbita maxima OX=3661 GN=LOC111476955... [more]
A0A6J1C9Z52.43e-5194.57uncharacterized protein LOC111009737 OS=Momordica charantia OX=3673 GN=LOC111009... [more]
A0A6A1UYF76.96e-5194.38Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR7G010698 PE=4 SV=1[more]
A0A0B2PI483.31e-4989.01Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_038894 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G21930.11.5e-3373.47unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G42150.22.7e-3273.12unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G42150.12.7e-3273.12unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G42150.32.7e-3273.12unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 66..93
NoneNo IPR availablePANTHERPTHR35691EXPRESSED PROTEINcoord: 1..90
NoneNo IPR availablePANTHERPTHR35691:SF1EXPRESSED PROTEINcoord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g226760.m01Csor.00g226760.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane