Csor.00g226350 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g226350
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr09: 4376525 .. 4379239 (-)
RNA-Seq ExpressionCsor.00g226350
SyntenyCsor.00g226350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGTGAGTCGGTGCATCGTTTGTAGTAAAGAAAAGTTTAAGCGCACGAATTGCGGTGCAATGCGTCTGCTACTTACGACCACTCGCTCCCTCGCTCCCTCGCTCCACGCGCTCACACGTGGACATACTTTTATTATCGTTAATAATTAATACAATATAGAAAATAAAGATTGGGCTGGGCCTGTGCATTGACCGGCCCATGGCCCATTTCCTCTCAGAAAAAGACAAAAACAGGGGACCTATTTCTTGTGGGTCCCACGTACAAAATGAAACCCTCTACTTAATTAATTTGATAAATTATTAATTATAACGTTAATCCTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATCACGACCCAATTAAGATAATTTTTAAAAAATTTAAATTCTAAAATAAAAGAATTTTAAATGAGAAGTGACAAAATTTATTTAAATTATACCGAAAATGAATTTAATGGGCTTACTTAAGCCCAATGATACTCTTAAGCCCAAATCTATTTTCGAATTGGGCTGCTAGCAACAGTAATTCTTTATTAAAATAATAATAATAATATTTTATTTTTTAAGAAATAAAACTCTAATTTAGATGTATCATAAATTGTAATTTTAAAAACGTTCTTCAAATAATTTTTTTTTTAAAAATAATTTATTGTATTAAAAAAATAAGTAGATTGTAATTTGTAGTTAATAATACGAGCATAGACCAACTCGAGCTTTTTTTCAAGTTTTCAGTAACTGGATGGAAAGTGATCGAAGAGTGAAAATCTAAATCAAATGTACTAGCCTAGCAAAAACGGCTCTGGATTTGCCATAATCTTTAGTTTCAATATAGTCTAGTGGTCTTTAGTTTCTAGTGATTCGAGGGGTTTAATATAGTCCAGTGGTCTTTAGTTTCAATATAGTCGTGGTTCGAGGGGTTTAATATATTTTTTTTATTTGTTAAAGTTCGTCGATCTTACATTATAAATATCTTATCCATCATAAATATCTTATCCATTAAGTTACGCTGGTTTATAGTCCTTAAATTGAATATTGCTATAGGAAACATCTTTTGTTCACCTATGGGTTAATCTCTCTCAACTAGTTCAGGTGAAATGGAAGGGTGATCAAGGGTACCTAGACGTCGATATCTCTTATCTATGGCAGGAGGTTTCTATCGTCTCAATGAGTGTGTTGTAGGAGAGGGAATACCTATGACTCTAAATCGATAGGATGAGCATTCTAAGCAGTCGTAGGCGAAAGAGACACGGGCGACAACGCTTCCGGAGTTCAAGAGTATACAACAAACTCGTAGGCATCAGGACCTCCCATTTCCTTTGACCAACGGGTCTTCGAACCAAGCGGTCTAGCCTCCACCTACATTCACCCTCTGTCGGGTGGAAATAGTTGTTGGAACTGGTTTTCCAATTCCATCCCGAATCTACTCAACCCTAGGCTACATATAATTAGCATAGCTAGCTAAGTAAGTGTAACAACCCAAGTCCACTGCTAGCAGATATTGTCCTCTTTGGGTTTTCCGTTGTAGACTAGCAAATGGTATTAGAGTCAGACGCCGAACAGTATGTTAGCGAGGACGCTGAACTCCGAAGGGGGTGGACACCGAGCAGTGTGCCAATAAGAGACACATGACCAAAAGAGGAGTGGATTATGAGATCCCACATCAGTTGGAGAGGAGGAACGAATCATTCTTTATAAGAGTATGAAATCTTCTCCCTAGCAGACCGATTTTAAAAACTTCGAGGGAAAGTTTAGAAGCAGTGAGCTTGAGCCGTTACAAAAAAGCTGTCATGTAAATATATGATGTATCGTGTACTTATATGCGAGTGTCGATATATAAGAATAATAAAGTAACGATATGATCCATTGTATTATAAAAATGAATTGAAGCATATAAAACTATATATTAATTTAAATTAAAGCAAACCAACGAGTACATAATATACGGATGTTTAATGAATGATCCCATCATGCAATCAAGTCAAAATCATAATATTAAATCAAAATTTATAAATGAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTATTGATGAAACGGTGAGTTTTACTTTGATGATCCCATCCATGTTTTTTTTTTTCAATTTCATTTACGTACAATTTTTTCCTGTAGAATTATTGCGAAGTGCGATAAAGAGAGGGGGAAGAAAATGAAGAGCGAAGGGTAGTTCCATTGAATCCAACAAAAATTCTCTTTGATTGCGAAGAGGAAGAGATCTATGGTGTTTTTGCTCAGAAGAAATCAGTTCCTTGTGATATTGTTTTGAATCGCATTCTTGGGTAAGTCTCTGAATCTCAATCCGTGAACAAATGGATATTGCAATTGAATTTCTGAAATTGGAGGCCTCATTTCGAAGCCACTCCTCTGTTATTGTTTCTCTTTCGATGTTGACTTTGTTTTGCTCGGTGTTTCTCATTATGTTGGCCTGTCGCCATTGCGTATCTTAGCTCCTCCAACCCGTCGTATGTTTTGTTGAGACCCACTTTCTTTACTTCGGGTTCAAGGGCTGCTGCGCATTATCTTATGCTAACGTCAATTGTTCTTTTCGTGAATCTGGATTCTGTTTCGTTGTCAAATTCATGGGTTTGGTTGGTGTGGATAATTTTGTTTTTTCTTTGGTGTTTTTCAAATGCTATTCCAGATTTGATATTCGAGGTTACAGTTGGGATTGGTGA

mRNA sequence

ATGGCAGTGAGTCGGTGCATCGTTTGTAGTAAAGAAAAGTTTAAGCGCACGAATTGCGGTGCAATGCGTCTGCTACTTACGACCACTCGCTCCCTCGCTCCCTCGCTCCACGCGCTCACACAGGAAGAGATCTATGGTGTTTTTGCTCAGAAGAAATCAGTTCCTTGTGATATTGTTTTGAATCGCATTCTTGGATTTGATATTCGAGGTTACAGTTGGGATTGGTGA

Coding sequence (CDS)

ATGGCAGTGAGTCGGTGCATCGTTTGTAGTAAAGAAAAGTTTAAGCGCACGAATTGCGGTGCAATGCGTCTGCTACTTACGACCACTCGCTCCCTCGCTCCCTCGCTCCACGCGCTCACACAGGAAGAGATCTATGGTGTTTTTGCTCAGAAGAAATCAGTTCCTTGTGATATTGTTTTGAATCGCATTCTTGGATTTGATATTCGAGGTTACAGTTGGGATTGGTGA

Protein sequence

MAVSRCIVCSKEKFKRTNCGAMRLLLTTTRSLAPSLHALTQEEIYGVFAQKKSVPCDIVLNRILGFDIRGYSWDW
Homology
[Close]
BLAST of Csor.00g226350 vs. NCBI nr
Match: KAG6591946.1 (hypothetical protein SDJN03_14292, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 159 bits (401), Expect = 5.05e-49
Identity = 75/75 (100.00%), Postives = 75/75 (100.00%), Query Frame = 0 

Query: 1  MAVSRCIVCSKEKFKRTNCGAMRLLLTTTRSLAPSLHALTQEEIYGVFAQKKSVPCDIVL 60
          MAVSRCIVCSKEKFKRTNCGAMRLLLTTTRSLAPSLHALTQEEIYGVFAQKKSVPCDIVL
Sbjct: 1  MAVSRCIVCSKEKFKRTNCGAMRLLLTTTRSLAPSLHALTQEEIYGVFAQKKSVPCDIVL 60

Query: 61 NRILGFDIRGYSWDW 75
          NRILGFDIRGYSWDW
Sbjct: 61 NRILGFDIRGYSWDW 75

The following BLAST results are available for this feature:
BLAST of Csor.00g226350 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g226350 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6591946.15.05e-49100.00hypothetical protein SDJN03_14292, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g226350 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g226350 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g226350.m01Csor.00g226350.m01mRNA