Csor.00g224450 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g224450
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	myosin IB heavy chain-like
Location	Csor_Chr02: 6874341 .. 6876444 (+)
RNA-Seq Expression	Csor.00g224450
Synteny	Csor.00g224450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAATCCAGATCCCGGAGGCGGGTCATCATCGACGACAATTCTCCTGCCACCGGAGTTGTGGAACGACGCGACGCCGTCGGGACCGACGACGATGTGCAGGGACTGAAATTTCGACCCTCCGATGGGAATGTCACCGAAGATCAGGAGCTCTTCATGGGCATCAAGGTCCGTCGAAAAGACTCGCTTCATAATGATTACAAGGGGGATTACATTGATGTTCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTTAAATTTGCACATGCTGCGTTGATATTATATATTATTTACGGTGTTTTGATCATGTCCGGCCTCGAATTGAATTTCGTTTGCTTTTGTAGTTCGCTCACGTATCTATGTATTTCGTGTCTGAAATTCGTAAATTATAGTTGATTGATTATAGTTTGTTCGTCCTTCTTTGTCAAATTGTATGTCGATGATAGTTTTCCATCTCCAGAATTGCGAATCTATTGTTCTCATGATGTTTAATAACTCTTCTTTCTCTTGTCCCTTACTTTTTGTATGCAATCAAATGAAAATGGTGTTTGATTTTCAGGATGATTGCTAGGTAATGATGGAAATATACACGCATGTTTGAAATTATTATCTATTTGGACACTATGTATTGTTTAATTCCTAAACATATAATTTATTCCTATGCATTGTGTAGTTTCCTTTTTGAATTTGTGAATGAATAGGATCATTTCAGCTGGCTATTAAGCATTTTGGAGAGTACTTAGCAGAGTGAAGACGAGAGATTTTGTTGGATTTACTTTCTTGTATCTTCTAAACTCCATCTTTGATTGAATAAGACATGAAATTTATTTGGTTGAACTCTTTAAGTATAATGAGGAAGAAAATAGTATCCTCCGGTGTGTTAATGTCTCTTCGAACGGCCCCTACTCTTGCAGAATATTATGGTTTTTATTGCGTTCGTATCAGCCATTTTGAACTGATGCATCGTTCATACACGTCTTCTTTTGAATTCTATATCAAGCCATAACCAAGTTCTACCATGCTTGTTATCCCTACAGGTGAAGAGAGTGTGCTTTTTGCAGACAAAGTTTTGAAGTTCACTGCTTCTGGGAAGATGAAAAGACGGATTCTTTTAATAACAGAGTTCGCCATTTATATCGTTGACCCAGAAACTGATACCCTTAAAAGGAGGGTTGCCCTGGCTGCTGTGGATAAGATATGTTTAAGTGAACTAAGTGATAACTTCTATGCAATTGTAATCCCAACCGAGTATGATATACTGATGGCAAGTACTCGGAAAACAGAGATCGTAACAGTTTTGGTTGACGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGATTGTATTCTCCAACAGGTAATGGACATTATCTTCCCCATTTATCGTTCCCATTATGAACCGATATTTTCATTGTTATATGATGGTACTTATGTAAATCAGTTAACGAGATTTCGCTACCGATATTTTCAAAGTTTTTCATTTCATTTTGATTTAGTTACCATTTGAATATCTATTTCTTCTTGTTGAGTTGTAGTGTTTTAAGACGAGGATATTTGTGTTTTTTTTTTTTTCTAAATGTTTGTTATCCCTCTTTTTTTTTTTTCCTTTTTTAGGTTTGTGTACAGTGCAGGTGGTGAACTGATAAAAGAAGTTCAATTCGAGGAAGTCGAAGGTACGAATATATCTTTTTAAGTCGGAATTTAGCATTCGCATTTATTTTGTTCTTGTTTCTCGTACTCTGTTAGAGAACCCGAAGATAGACTTGTTTCCCTTTCTAAAGAATTGGTAAAAGAAGTATATTTGATAGTTCTCTTCTGTTTTCCCTTTATATTTGGAAAAAAAAAAAAACACATTATTTTGTTCTTTTTTCACCTTATTCTCTCAAACTTTACATTTATTGAAATTATTTTCAAATGTTGTATAAAAAATTGGGAACAGTTCTTGTTACCAAATGGAAAGCAAGGAAGAGTTACCAAAATAAATATGTTATCTGAAGAACTAAGAATAAGAAGCAAAAACATTACTAAAAGTGTCTGGTACTGGTAATAATATGCAGGTGGTGTGAAAACAAGAATTTCGAGGAAGGAGGAGTGA

mRNA sequence

ATGGAATCCAGATCCCGGAGGCGGGTCATCATCGACGACAATTCTCCTGCCACCGGAGTTGTGGAACGACGCGACGCCGTCGGGACCGACGACGATGTGCAGGGACTGAAATTTCGACCCTCCGATGGGAATGTCACCGAAGATCAGGAGCTCTTCATGGGCATCAAGGTCCGTCGAAAAGACTCGCTTCATAATGATTACAAGGGGGATTACATTGATGTTCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTGAAGAGAGTGTGCTTTTTGCAGACAAAGTTTTGAAGTTCACTGCTTCTGGGAAGATGAAAAGACGGATTCTTTTAATAACAGAGTTCGCCATTTATATCGTTGACCCAGAAACTGATACCCTTAAAAGGAGGGTTGCCCTGGCTGCTGTGGATAAGATATGTTTAAGTGAACTAAGTGATAACTTCTATGCAATTGTAATCCCAACCGAGTATGATATACTGATGGCAAGTACTCGGAAAACAGAGATCGTAACAGTTTTGGTTGACGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGATTGTATTCTCCAACAGGTTTGTGTACAGTGCAGGTGGTGAACTGATAAAAGAAGTTCAATTCGAGGAAGTCGAAGGTGGTGTGAAAACAAGAATTTCGAGGAAGGAGGAGTGA

Coding sequence (CDS)

ATGGAATCCAGATCCCGGAGGCGGGTCATCATCGACGACAATTCTCCTGCCACCGGAGTTGTGGAACGACGCGACGCCGTCGGGACCGACGACGATGTGCAGGGACTGAAATTTCGACCCTCCGATGGGAATGTCACCGAAGATCAGGAGCTCTTCATGGGCATCAAGGTCCGTCGAAAAGACTCGCTTCATAATGATTACAAGGGGGATTACATTGATGTTCCCTCGAATCAATTCTTGATGAAAATCCTGCAAAAACAAGGTGAAGAGAGTGTGCTTTTTGCAGACAAAGTTTTGAAGTTCACTGCTTCTGGGAAGATGAAAAGACGGATTCTTTTAATAACAGAGTTCGCCATTTATATCGTTGACCCAGAAACTGATACCCTTAAAAGGAGGGTTGCCCTGGCTGCTGTGGATAAGATATGTTTAAGTGAACTAAGTGATAACTTCTATGCAATTGTAATCCCAACCGAGTATGATATACTGATGGCAAGTACTCGGAAAACAGAGATCGTAACAGTTTTGGTTGACGCCTTTAAGAGTTCCTCTGATTATGAACTTGAGATTGTATTCTCCAACAGGTTTGTGTACAGTGCAGGTGGTGAACTGATAAAAGAAGTTCAATTCGAGGAAGTCGAAGGTGGTGTGAAAACAAGAATTTCGAGGAAGGAGGAGTGA

Protein sequence

MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRKDSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIYIVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFKSSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE

Homology

[Close]

BLAST of Csor.00g224450 vs. ExPASy Swiss-Prot
Match: P19706 (Myosin heavy chain IB OS=Acanthamoeba castellanii OX=5755 GN=MIB PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 2.9e-16
Identity = 53/172 (30.81%), Postives = 93/172 (54.07%), Query Frame = 0


Query: 50  ELFMGIKVRRKDSLHNDYKGDYIDVPSNQFLMKILQKQG--EESVLFADKVLKFTASGKM 109
           +L  G K R++ S++  Y+ DYI+  +N  L   ++  G  +E+  F D+VL     GK 
Sbjct: 709 DLLKGKKERQRHSVNRKYEFDYINYDANYPLQDCVRSSGRDKEATAFTDQVLVLNRRGKP 768

Query: 110 KRRILLITEFAIYIVDPETDT------LKRRVALAAVDKICLSELSDNFYAIVIPTEYDI 169
           +RR L++T  A+Y    +  +      LKRR+ L  +  + LS L DN Y ++   +YD+
Sbjct: 769 ERRDLIVTNEAVYFAMRKKKSGQVVYNLKRRIPLGEIASLSLSTLQDN-YVVIHHNQYDM 828

Query: 170 LMASTRKTEIVTVLVDAFKSSSDYELEIVFSNRFVYSAGGELIKEVQFEEVE 214
           +  + +KTEIVT+L++ +K S   +L + F++   Y A     + + F + E
Sbjct: 829 VFENDKKTEIVTILMENYKMSGGRDLPVNFNDNITYKASNGAQRRLTFSKNE 879

[Close]

BLAST of Csor.00g224450 vs. ExPASy Swiss-Prot
Match: P34092 (Myosin IB heavy chain OS=Dictyostelium discoideum OX=44689 GN=myoB PE=1 SV=2)

HSP 1 Score: 83.6 bits (205), Expect = 3.2e-15
Identity = 55/170 (32.35%), Postives = 91/170 (53.53%), Query Frame = 0


Query: 51  LFMGIKVRRKDSLHNDYKGDYIDVPSNQFLMKILQK-QGEESVLFADKVLKFTASGKMKR 110
           +F   K R+++S+   +  DYID  +   L + +Q    +E V+FAD V+K     K K 
Sbjct: 724 MFKDKKERQRNSIDRKFTSDYIDFENQFGLQEAMQNAHKKERVVFADTVIKIDRRAKQKN 783

Query: 111 RILLITEFAIYIVDPE------TDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILM 170
             +++T+ A+Y V+          TL RRV L  +  + +S LSDN     +P E+D ++
Sbjct: 784 YEMVLTDQALYFVEKSIKKKVLVHTLIRRVGLREIKGVSISTLSDNVIVFHLP-EHDQVI 843

Query: 171 ASTRKTEIVTVLVDAFKSSSDYELEIVFSNRFVYSAGGELIKEVQFEEVE 214
            + +KTEI+ VLV+ FK+     L + FS+R  Y+      KE+ F++ E
Sbjct: 844 ENDKKTEIIIVLVEYFKAIGGGSLNVQFSDRINYTLKKGEQKEISFQKSE 892

[Close]

BLAST of Csor.00g224450 vs. ExPASy Swiss-Prot
Match: P34109 (Myosin ID heavy chain OS=Dictyostelium discoideum OX=44689 GN=myoD PE=1 SV=2)

HSP 1 Score: 79.7 bits (195), Expect = 4.6e-14
Identity = 49/151 (32.45%), Postives = 80/151 (52.98%), Query Frame = 0


Query: 56  KVRRKDSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLIT 115
           K RR+ S+   Y+GDYI+   N  L  I++K G E ++F   V K+    + +RR+LL++
Sbjct: 725 KERRRLSIERPYQGDYINYRENFELKDIVKKNGNEKIMFTHAVNKYDRRSRCQRRVLLLS 784

Query: 116 EFAIYIVDPETD-------------TLKRRVALAAVDKICLSELSDNFYAIVIPTEYDIL 175
           + AIY +  E +               KRR+ LA +  + LS+LSD F  +    E+D +
Sbjct: 785 DTAIYFIATEKNKDKEDRKKRPWIYVQKRRLLLAGITSVELSKLSDGFVVLKTMNEHDQI 844

Query: 176 MASTRKTEIVTVLVDAFKSSSDYELEIVFSN 194
               RKTE +  L+ A+K+ +   L I ++N
Sbjct: 845 FECRRKTEFLGTLIKAYKTGT---LRINYNN 872

[Close]

BLAST of Csor.00g224450 vs. ExPASy Swiss-Prot
Match: E9Q634 (Unconventional myosin-Ie OS=Mus musculus OX=10090 GN=Myo1e PE=1 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 2.1e-11
Identity = 53/186 (28.49%), Postives = 94/186 (50.54%), Query Frame = 0


Query: 47  EDQELFMGIKVRRKDSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGK 106
           E  +L +  K RR++S++ ++ GDYI +     L + + K+  E + FAD V K+    K
Sbjct: 721 EASDLLLNKKERRRNSINRNFIGDYIGMEERPELQQFVGKR--EKIDFADTVTKYDRRFK 780

Query: 107 MKRRILLITEFAIYIVDPE-----------TDTLKRRVALAAVDKICLSELSDNFYAIVI 166
             +R LL+T   +Y++  E            + LKRR+ +  +  + LS + D+ + I+ 
Sbjct: 781 GVKRDLLLTPKCLYLIGREKVKQGPDKGVVKEVLKRRIEVERILSVSLSTMQDDIF-ILH 840

Query: 167 PTEYDILMASTRKTEIVTVLVDAFKSSSDYELEIVFSNRF----------VYSAGGELIK 212
             EYD L+ S  KTE +++L   ++  +  +L + FSN             +SAGG   +
Sbjct: 841 EQEYDSLLESVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLELKLKKENWGPWSAGGS--R 900

[Close]

BLAST of Csor.00g224450 vs. ExPASy Swiss-Prot
Match: Q12965 (Unconventional myosin-Ie OS=Homo sapiens OX=9606 GN=MYO1E PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 2.8e-11
Identity = 52/186 (27.96%), Postives = 95/186 (51.08%), Query Frame = 0


Query: 47  EDQELFMGIKVRRKDSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGK 106
           E  +L +  K RR++S++ ++ GDYI +  +  L + + K+  E + FAD V K+    K
Sbjct: 721 EASDLLLNKKERRRNSINRNFIGDYIGMEEHPELQQFVGKR--EKIDFADTVTKYDRRFK 780

Query: 107 MKRRILLITEFAIYIVDPE-----------TDTLKRRVALAAVDKICLSELSDNFYAIVI 166
             +R LL+T   +Y++  E            + LKR++ +  +  + LS + D+ + I+ 
Sbjct: 781 GVKRDLLLTPKCLYLIGREKVKQGPDKGLVKEVLKRKIEIERILSVSLSTMQDDIF-ILH 840

Query: 167 PTEYDILMASTRKTEIVTVLVDAFKSSSDYELEIVFSNRF----------VYSAGGELIK 212
             EYD L+ S  KTE +++L   ++  +  +L + FSN             +SAGG   +
Sbjct: 841 EQEYDSLLESVFKTEFLSLLAKRYEEKTQKQLPLKFSNTLELKLKKENWGPWSAGGS--R 900

[Close]

BLAST of Csor.00g224450 vs. NCBI nr
Match: KAG6605764.1 (Myosin heavy chain IB, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035729.1 Myosin heavy chain IB [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 425 bits (1093), Expect = 1.08e-149
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK
Sbjct: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
           DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK
Sbjct: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE
Sbjct: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225

[Close]

BLAST of Csor.00g224450 vs. NCBI nr
Match: XP_023534740.1 (myosin IB heavy chain-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 418 bits (1074), Expect = 8.50e-147
Identity = 220/225 (97.78%), Postives = 224/225 (99.56%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           MESRSRRRV+IDDNSPATGVV+RRDAVGT DDVQGLKFRPSDGNVTEDQELFMGIKVRRK
Sbjct: 1   MESRSRRRVLIDDNSPATGVVDRRDAVGTADDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
           DSLH+DYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  DSLHHDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           I+DPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK
Sbjct: 121 IIDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE
Sbjct: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225

[Close]

BLAST of Csor.00g224450 vs. NCBI nr
Match: XP_022995221.1 (myosin IB heavy chain-like [Cucurbita maxima])

HSP 1 Score: 415 bits (1067), Expect = 9.91e-146
Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           MESRSRRR +IDDNSP+ GVVERRDAVGT DDVQGLKFRPSDGNVTEDQ+LFMGIKVRRK
Sbjct: 1   MESRSRRRALIDDNSPSAGVVERRDAVGTADDVQGLKFRPSDGNVTEDQDLFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
           DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           I+DPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK
Sbjct: 121 IIDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE
Sbjct: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225

[Close]

BLAST of Csor.00g224450 vs. NCBI nr
Match: XP_022958413.1 (myosin IB heavy chain-like [Cucurbita moschata])

HSP 1 Score: 413 bits (1062), Expect = 5.73e-145
Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           MESRSRRRV+IDDNSPA GV++R DAVGT DDVQGLKFRPSDGNVTEDQELFMGIKVRRK
Sbjct: 1   MESRSRRRVLIDDNSPAAGVLDRHDAVGTADDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
           DSLH+DYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  DSLHHDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK
Sbjct: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE
Sbjct: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225

[Close]

BLAST of Csor.00g224450 vs. NCBI nr
Match: KAA0042567.1 (myosin IC heavy chain [Cucumis melo var. makuwa] >TYK05971.1 myosin IC heavy chain [Cucumis melo var. makuwa])

HSP 1 Score: 385 bits (990), Expect = 5.39e-134
Identity = 200/225 (88.89%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           M+SRSRRRV+IDD SPA+G VER D  G DDDVQGLKFRPSDGNVTEDQE FMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPDVAGPDDDVQGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
            SLH DYKGDYIDVPSNQFLMKILQKQGE+SVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           I+DPETDTLKRR+ALAAVDKICLSELSDNF+ IVIPTEYDILMASTRKTEIVTVLV+AFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELE+VFSNRF Y+AGGELIKE+ FEEVEGGVKTRI RK+E
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGELIKEILFEEVEGGVKTRILRKQE 225

[Close]

BLAST of Csor.00g224450 vs. ExPASy TrEMBL
Match: A0A6J1K1E1 (myosin IB heavy chain-like OS=Cucurbita maxima OX=3661 GN=LOC111490830 PE=4 SV=1)

HSP 1 Score: 415 bits (1067), Expect = 4.80e-146
Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           MESRSRRR +IDDNSP+ GVVERRDAVGT DDVQGLKFRPSDGNVTEDQ+LFMGIKVRRK
Sbjct: 1   MESRSRRRALIDDNSPSAGVVERRDAVGTADDVQGLKFRPSDGNVTEDQDLFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
           DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           I+DPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK
Sbjct: 121 IIDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE
Sbjct: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225

[Close]

BLAST of Csor.00g224450 vs. ExPASy TrEMBL
Match: A0A6J1H312 (myosin IB heavy chain-like OS=Cucurbita moschata OX=3662 GN=LOC111459642 PE=4 SV=1)

HSP 1 Score: 413 bits (1062), Expect = 2.78e-145
Identity = 218/225 (96.89%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           MESRSRRRV+IDDNSPA GV++R DAVGT DDVQGLKFRPSDGNVTEDQELFMGIKVRRK
Sbjct: 1   MESRSRRRVLIDDNSPAAGVLDRHDAVGTADDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
           DSLH+DYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  DSLHHDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK
Sbjct: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE
Sbjct: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225

[Close]

BLAST of Csor.00g224450 vs. ExPASy TrEMBL
Match: A0A5D3C208 (Myosin IC heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00670 PE=4 SV=1)

HSP 1 Score: 385 bits (990), Expect = 2.61e-134
Identity = 200/225 (88.89%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           M+SRSRRRV+IDD SPA+G VER D  G DDDVQGLKFRPSDGNVTEDQE FMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPDVAGPDDDVQGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
            SLH DYKGDYIDVPSNQFLMKILQKQGE+SVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           I+DPETDTLKRR+ALAAVDKICLSELSDNF+ IVIPTEYDILMASTRKTEIVTVLV+AFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELE+VFSNRF Y+AGGELIKE+ FEEVEGGVKTRI RK+E
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGELIKEILFEEVEGGVKTRILRKQE 225

[Close]

BLAST of Csor.00g224450 vs. ExPASy TrEMBL
Match: A0A1S3AUY9 (myosin IC heavy chain OS=Cucumis melo OX=3656 GN=LOC103482945 PE=4 SV=1)

HSP 1 Score: 384 bits (985), Expect = 1.51e-133
Identity = 199/225 (88.44%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           M+SRSRRRV+IDD SPA+G VER D  G +DDVQGLKFRPSDGNVTEDQE FMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPDVAGPNDDVQGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
            SLH DYKGDYIDVPSNQFLMKILQKQGE+SVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQFLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           I+DPETDTLKRR+ALAAVDKICLSELSDNF+ IVIPTEYDILMASTRKTEIVTVLV+AFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELE+VFSNRF Y+AGGELIKE+ FEEVEGGVKTRI RK+E
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGELIKEILFEEVEGGVKTRILRKQE 225

[Close]

BLAST of Csor.00g224450 vs. ExPASy TrEMBL
Match: A0A0A0KNB2 (TH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139650 PE=4 SV=1)

HSP 1 Score: 381 bits (978), Expect = 1.76e-132
Identity = 197/225 (87.56%), Postives = 212/225 (94.22%), Query Frame = 0


Query: 1   MESRSRRRVIIDDNSPATGVVERRDAVGTDDDVQGLKFRPSDGNVTEDQELFMGIKVRRK 60
           M+SRSRRRV+IDD SPA+G VER    G DDDV+GLKFRPSDGNVTEDQE FMGIKVRRK
Sbjct: 1   MDSRSRRRVLIDDRSPASGAVERPVVAGPDDDVRGLKFRPSDGNVTEDQEPFMGIKVRRK 60

Query: 61  DSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKMKRRILLITEFAIY 120
            SLH DYKGDYIDVPSNQ+LMKILQKQGE+SVLFADKVLKFTASGKMKRRILLITEFAIY
Sbjct: 61  ASLHRDYKGDYIDVPSNQYLMKILQKQGEQSVLFADKVLKFTASGKMKRRILLITEFAIY 120

Query: 121 IVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTRKTEIVTVLVDAFK 180
           I+DPETDTLKRR+ALAAVDKICLSELSDNF+ IVIPTEYDILMASTRKTEIVTVLV+AFK
Sbjct: 121 IIDPETDTLKRRIALAAVDKICLSELSDNFFTIVIPTEYDILMASTRKTEIVTVLVEAFK 180

Query: 181 SSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTRISRKEE 225
           SSSDYELE+VFSNRF Y+AGGE+IKE+QFEEVEGGVKTRI RK+E
Sbjct: 181 SSSDYELEVVFSNRFAYNAGGEVIKEIQFEEVEGGVKTRILRKQE 225

[Close]

BLAST of Csor.00g224450 vs. TAIR 10
Match: AT5G53310.1 (myosin heavy chain-related )

HSP 1 Score: 228.0 bits (580), Expect = 7.4e-60
Identity = 109/172 (63.37%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 48  DQELFMGIKVRRKDSLHNDYKGDYIDVPSNQFLMKILQKQGEESVLFADKVLKFTASGKM 107
           D   F G KVRRK S + +++GDY+ V S   LM+IL+KQG+ S+LFADKVLKFT SGKM
Sbjct: 35  DHTPFAGGKVRRKASRYREHRGDYLHVSSRPGLMRILEKQGDTSILFADKVLKFTGSGKM 94

Query: 108 KRRILLITEFAIYIVDPETDTLKRRVALAAVDKICLSELSDNFYAIVIPTEYDILMASTR 167
           KRRI ++T+FAIY++DPET+ + RR+AL++V+K+CLS+LSDNF+AI+IPTEYD+ MASTR
Sbjct: 95  KRRIFILTDFAIYLIDPETEAMTRRIALSSVEKMCLSKLSDNFFAIIIPTEYDLFMASTR 154

Query: 168 KTEIVTVLVDAFKSSSDYELEIVFSNRFVYSAGGELIKEVQFEEVEGGVKTR 220
           KTE+V V+VD  KS+SDYELE++ SNRF Y+A   L+KEV FEE EGG+KT+
Sbjct: 155 KTELVQVMVDVTKSASDYELEVLLSNRFEYNASASLVKEVSFEESEGGIKTK 206

The following BLAST results are available for this feature:

BLAST of Csor.00g224450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19706	2.9e-16	30.81	Myosin heavy chain IB OS=Acanthamoeba castellanii OX=5755 GN=MIB PE=1 SV=2	[more]
P34092	3.2e-15	32.35	Myosin IB heavy chain OS=Dictyostelium discoideum OX=44689 GN=myoB PE=1 SV=2	[more]
P34109	4.6e-14	32.45	Myosin ID heavy chain OS=Dictyostelium discoideum OX=44689 GN=myoD PE=1 SV=2	[more]
E9Q634	2.1e-11	28.49	Unconventional myosin-Ie OS=Mus musculus OX=10090 GN=Myo1e PE=1 SV=1	[more]
Q12965	2.8e-11	27.96	Unconventional myosin-Ie OS=Homo sapiens OX=9606 GN=MYO1E PE=1 SV=2	[more]

BLAST of Csor.00g224450 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605764.1	1.08e-149	100.00	Myosin heavy chain IB, partial [Cucurbita argyrosperma subsp. sororia] >KAG70357...	[more]
XP_023534740.1	8.50e-147	97.78	myosin IB heavy chain-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995221.1	9.91e-146	96.89	myosin IB heavy chain-like [Cucurbita maxima]	[more]
XP_022958413.1	5.73e-145	96.89	myosin IB heavy chain-like [Cucurbita moschata]	[more]
KAA0042567.1	5.39e-134	88.89	myosin IC heavy chain [Cucumis melo var. makuwa] >TYK05971.1 myosin IC heavy cha...	[more]

BLAST of Csor.00g224450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1K1E1	4.80e-146	96.89	myosin IB heavy chain-like OS=Cucurbita maxima OX=3661 GN=LOC111490830 PE=4 SV=1	[more]
A0A6J1H312	2.78e-145	96.89	myosin IB heavy chain-like OS=Cucurbita moschata OX=3662 GN=LOC111459642 PE=4 SV...	[more]
A0A5D3C208	2.61e-134	88.89	Myosin IC heavy chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold37...	[more]
A0A1S3AUY9	1.51e-133	88.44	myosin IC heavy chain OS=Cucumis melo OX=3656 GN=LOC103482945 PE=4 SV=1	[more]
A0A0A0KNB2	1.76e-132	87.56	TH1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139650 PE=4 SV...	[more]

BLAST of Csor.00g224450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G53310.1	7.4e-60	63.37	myosin heavy chain-related	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010926	Class I myosin tail homology domain	PFAM	PF06017	Myosin_TH1	coord: 49..213 e-value: 2.7E-38 score: 131.6
IPR010926	Class I myosin tail homology domain	PROSITE	PS51757	TH1	coord: 56..225 score: 23.432533
None	No IPR available	PANTHER	PTHR34969	OS01G0621700 PROTEIN	coord: 5..223
None	No IPR available	PANTHER	PTHR34969:SF4	SUBFAMILY NOT NAMED	coord: 5..223

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g224450.m01	Csor.00g224450.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016459	myosin complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0003774	cytoskeletal motor activity