Csor.00g224100 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g224100
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	dof zinc finger protein 1-like
Location	Csor_Chr02: 7075779 .. 7076282 (+)
RNA-Seq Expression	Csor.00g224100
Synteny	Csor.00g224100

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTGGTTTTCAGAATTCAGCTGGAGGAGGAGGAGGAGGGAGGAGGAGGATCTTCATCAAGTTCTTCAAAGGGTAATCATGCATTAGAGAGAAAAGTAAGGCCAGAAAAGGAACAAGCTTTGAGGTGTCCGAGGTGCAATTCAGCCAACACCAAGTTCTGTTATTACAACAATTACAGTTTGTCTCAGCCCAGGTATTTTTGCAAAGCTTGTCGGAAGTATTGGACTGACGGCAGCTCTTTAAGGAATGTTCCTGTCGGCGGTGGCTCAAGGAAGAACAGAAGGTCTTCATTTTCATCATCATCAGCTGATGATGATAGAAAGATTGACACTCACCACCCTATTCCGGCTTCTTCAACTACTTCTCCTCATCTTTTTGGTTCTTTCATGGCGGCTAACGGCGGCGGCAGCGATGACCAGACGGCTGTTGTGTTTCCAGCTGAAAAAGTTGAGTTAAATCGAGGATATTGGAATGGGATGTTGGGAGGTGGATCATGGTAA

mRNA sequence

ATGGATTTGGTTTTCAGAATTCAGCTGGAGGAGGAGGAGGAGGGAGGAGGAGGATCTTCATCAAGTTCTTCAAAGGGTAATCATGCATTAGAGAGAAAAGTAAGGCCAGAAAAGGAACAAGCTTTGAGGTGTCCGAGGTGCAATTCAGCCAACACCAAGTTCTGTTATTACAACAATTACAGTTTGTCTCAGCCCAGGTATTTTTGCAAAGCTTGTCGGAAGTATTGGACTGACGGCAGCTCTTTAAGGAATGTTCCTGTCGGCGGTGGCTCAAGGAAGAACAGAAGGTCTTCATTTTCATCATCATCAGCTGATGATGATAGAAAGATTGACACTCACCACCCTATTCCGGCTTCTTCAACTACTTCTCCTCATCTTTTTGGTTCTTTCATGGCGGCTAACGGCGGCGGCAGCGATGACCAGACGGCTGTTGTGTTTCCAGCTGAAAAAGTTGAGTTAAATCGAGGATATTGGAATGGGATGTTGGGAGGTGGATCATGGTAA

Coding sequence (CDS)

ATGGATTTGGTTTTCAGAATTCAGCTGGAGGAGGAGGAGGAGGGAGGAGGAGGATCTTCATCAAGTTCTTCAAAGGGTAATCATGCATTAGAGAGAAAAGTAAGGCCAGAAAAGGAACAAGCTTTGAGGTGTCCGAGGTGCAATTCAGCCAACACCAAGTTCTGTTATTACAACAATTACAGTTTGTCTCAGCCCAGGTATTTTTGCAAAGCTTGTCGGAAGTATTGGACTGACGGCAGCTCTTTAAGGAATGTTCCTGTCGGCGGTGGCTCAAGGAAGAACAGAAGGTCTTCATTTTCATCATCATCAGCTGATGATGATAGAAAGATTGACACTCACCACCCTATTCCGGCTTCTTCAACTACTTCTCCTCATCTTTTTGGTTCTTTCATGGCGGCTAACGGCGGCGGCAGCGATGACCAGACGGCTGTTGTGTTTCCAGCTGAAAAAGTTGAGTTAAATCGAGGATATTGGAATGGGATGTTGGGAGGTGGATCATGGTAA

Protein sequence

MDLVFRIQLEEEEEGGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHLFGSFMAANGGGSDDQTAVVFPAEKVELNRGYWNGMLGGGSW

Homology

[Close]

BLAST of Csor.00g224100 vs. ExPASy Swiss-Prot
Match: Q9SXG8 (Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.3e-33
Identity = 74/136 (54.41%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 15  GGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRK 74
           GGG    +   G  + ER+ RP+KE+AL CPRCNS NTKFCYYNNYSL QPRYFCK CR+
Sbjct: 51  GGGAPPVAGGAGAGSTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRR 110

Query: 75  YWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHLFGS----- 134
           YWT+G SLRNVPVGGGSRKN+RSS S++SA            PAS++T+  +  S     
Sbjct: 111 YWTEGGSLRNVPVGGGSRKNKRSSSSAASAS-----------PASASTANSVVTSASMSM 170

Query: 135 FMAANGGGSDDQTAVV 146
            MA+ GGG+     +V
Sbjct: 171 SMASTGGGASKNPKLV 175

[Close]

BLAST of Csor.00g224100 vs. ExPASy Swiss-Prot
Match: Q84JQ8 (Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-31
Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 30  LERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGG 89
           +ERK RPEK+QAL CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT G SLRN+PVGG
Sbjct: 37  VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96

Query: 90  GSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTS----PHL 127
           G RKN+RSS +SSS+       +  P+ A++ T     PHL
Sbjct: 97  GVRKNKRSSSNSSSSSPSSSSSSKKPLFANNNTPTPPLPHL 137

[Close]

BLAST of Csor.00g224100 vs. ExPASy Swiss-Prot
Match: Q8LAP8 (Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV=2)

HSP 1 Score: 136.0 bits (341), Expect = 4.0e-31
Identity = 69/130 (53.08%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 31  ERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGG 90
           ERK RPEK+QA+ CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT+G SLRN+PVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 91  SRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHL---FGSFMAANGGGSDDQTAVVFP 150
           SRKN+RS  SSS       I  +H       T  HL       M+ +  G   Q      
Sbjct: 102 SRKNKRSHSSSSD------ISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLE 161

Query: 151 AEKVELNRGY 158
             + +LN G+
Sbjct: 162 TTQQDLNLGF 165

[Close]

BLAST of Csor.00g224100 vs. ExPASy Swiss-Prot
Match: B9F1L8 (Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.9e-30
Identity = 58/85 (68.24%), Postives = 68/85 (80.00%), Query Frame = 0


Query: 16  GGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKY 75
           G  + + ++      ER+ RP+KE+AL CPRCNS NTKFCYYNNYSL QPRYFCK CR+Y
Sbjct: 54  GAAAGAGAAGAGAGTERRARPQKEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRY 113

Query: 76  WTDGSSLRNVPVGGGSRKNRRSSFS 101
           WT+G SLRNVPVGGGSRKN+RSS S
Sbjct: 114 WTEGGSLRNVPVGGGSRKNKRSSSS 138

[Close]

BLAST of Csor.00g224100 vs. ExPASy Swiss-Prot
Match: Q9ZPY0 (Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV=3)

HSP 1 Score: 123.2 bits (308), Expect = 2.7e-27
Identity = 73/138 (52.90%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 15  GGGGSSSSSSKGNHAL--ERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKAC 74
           G   S  S++  N A+  ERK RP+++  L CPRCNS NTKFCYYNNYSL+QPRYFCK C
Sbjct: 53  GATVSGVSNNNNNTAVVAERKARPQEK--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGC 112

Query: 75  RKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPAS--STTSPHLFGS- 134
           R+YWT+G SLRNVPVGG SRKN+RSS SSSS       +    IP+S      P LF + 
Sbjct: 113 RRYWTEGGSLRNVPVGGSSRKNKRSSSSSSS-------NILQTIPSSLPDLNPPILFSNQ 172

Query: 135 FMAANGGGSDDQTAVVFP 148
               + G S D   + FP
Sbjct: 173 IHNKSKGSSQDLNLLSFP 181

[Close]

BLAST of Csor.00g224100 vs. NCBI nr
Match: KAG6605798.1 (Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 344 bits (883), Expect = 1.35e-119
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0


Query: 1   MDLVFRIQLEEEEEGGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNY 60
           MDLVFRIQLEEEEEGGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNY
Sbjct: 1   MDLVFRIQLEEEEEGGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNY 60

Query: 61  SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS 120
           SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS
Sbjct: 61  SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS 120

Query: 121 TTSPHLFGSFMAANGGGSDDQTAVVFPAEKVELNRGYWNGMLGGGSW 167
           TTSPHLFGSFMAANGGGSDDQTAVVFPAEKVELNRGYWNGMLGGGSW
Sbjct: 121 TTSPHLFGSFMAANGGGSDDQTAVVFPAEKVELNRGYWNGMLGGGSW 167

[Close]

BLAST of Csor.00g224100 vs. NCBI nr
Match: KAG7035762.1 (Dof zinc finger protein DOF4.6, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318 bits (814), Expect = 5.00e-109
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0


Query: 15  GGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRK 74
           GGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRK
Sbjct: 18  GGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRK 77

Query: 75  YWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHLFGSFMAAN 134
           YWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHLFGSFMAAN
Sbjct: 78  YWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHLFGSFMAAN 137

Query: 135 GGGSDDQTAVVFPAEKVELNRGYWNGMLGGGSW 167
           GGGSDDQTAVVFPAEKVELNRGYWNGMLGGGSW
Sbjct: 138 GGGSDDQTAVVFPAEKVELNRGYWNGMLGGGSW 170

[Close]

BLAST of Csor.00g224100 vs. NCBI nr
Match: XP_022958525.1 (dof zinc finger protein 1-like [Cucurbita moschata])

HSP 1 Score: 288 bits (736), Expect = 2.32e-97
Identity = 141/155 (90.97%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MDLVFRIQLEEEEEGGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNY 60
           MD+ +  Q      GGGGSSSSSSKGNHALERKVRPEKE+ALRCPRCNSANTKFCYYNNY
Sbjct: 1   MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNY 60

Query: 61  SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS 120
           SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS
Sbjct: 61  SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS 120

Query: 121 TTSPHLFGSFMAANGGGSDDQTAVVFPAEKVELNR 155
           TTSPHLFGSFMAANGGG DDQTAV+FPAEKVELNR
Sbjct: 121 TTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR 155

[Close]

BLAST of Csor.00g224100 vs. NCBI nr
Match: XP_022996208.1 (dof zinc finger protein 1-like [Cucurbita maxima])

HSP 1 Score: 246 bits (628), Expect = 1.31e-80
Identity = 125/142 (88.03%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 15  GGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRK 74
           GGGGSSSSSSKGNH LERKVRP+KEQAL CPRCNSANTKFCYYNNYSLSQPRYFCKACRK
Sbjct: 32  GGGGSSSSSSKGNHVLERKVRPQKEQALSCPRCNSANTKFCYYNNYSLSQPRYFCKACRK 91

Query: 75  YWTDGSSLRNVPVGGGSRKNRRSSFSSSS---ADDDRKIDTHHPIPASSTTSPHLFGSFM 134
           YWT GSSLRNVPVGGGSRKNRRSSFSSSS   ADDDR IDTHHPIPASSTT+ HLF SFM
Sbjct: 92  YWTVGSSLRNVPVGGGSRKNRRSSFSSSSSSSADDDRNIDTHHPIPASSTTTTHLFYSFM 151

Query: 135 AANGGGS---DDQTAVVFPAEK 150
           AANGGG    DDQTAV+FPAE+
Sbjct: 152 AANGGGGGGGDDQTAVMFPAEE 173

[Close]

BLAST of Csor.00g224100 vs. NCBI nr
Match: XP_038906804.1 (dof zinc finger protein DOF4.6-like [Benincasa hispida])

HSP 1 Score: 176 bits (445), Expect = 1.98e-51
Identity = 116/260 (44.62%), Postives = 132/260 (50.77%), Query Frame = 0


Query: 14  EGGGGSSSSSSKGNH------------ALERKVRPEKEQALRCPRCNSANTKFCYYNNYS 73
           EGGG SSSS    N+             LERK RP+KEQAL CPRCNS NTKFCYYNNYS
Sbjct: 20  EGGGSSSSSKPNNNNNNNNNNNNNNGNLLERKARPQKEQALNCPRCNSTNTKFCYYNNYS 79

Query: 74  LSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSA----DDDRKIDT----- 133
           LSQPRYFCKACR+YWT+G SLRNVPVGGGSRKN+RSS  SSS+    D ++KI+      
Sbjct: 80  LSQPRYFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSSLSSSSSAPLDHNKKINASDQNP 139

Query: 134 ----HH-----------------PIPASSTTSPHLFGSFMAA------------------ 167
               HH                 PIP+SS+TS HL GSFM                    
Sbjct: 140 KMIHHHAHQDLNLAIFPPTSNNPPIPSSSSTSSHLLGSFMTMAAPAPGVFNAGGGFGLNE 199

[Close]

BLAST of Csor.00g224100 vs. ExPASy TrEMBL
Match: A0A6J1H3S0 (dof zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459730 PE=4 SV=1)

HSP 1 Score: 288 bits (736), Expect = 1.12e-97
Identity = 141/155 (90.97%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 1   MDLVFRIQLEEEEEGGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNY 60
           MD+ +  Q      GGGGSSSSSSKGNHALERKVRPEKE+ALRCPRCNSANTKFCYYNNY
Sbjct: 1   MDMPYSPQNSAGGGGGGGSSSSSSKGNHALERKVRPEKERALRCPRCNSANTKFCYYNNY 60

Query: 61  SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS 120
           SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS
Sbjct: 61  SLSQPRYFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS 120

Query: 121 TTSPHLFGSFMAANGGGSDDQTAVVFPAEKVELNR 155
           TTSPHLFGSFMAANGGG DDQTAV+FPAEKVELNR
Sbjct: 121 TTSPHLFGSFMAANGGGGDDQTAVMFPAEKVELNR 155

[Close]

BLAST of Csor.00g224100 vs. ExPASy TrEMBL
Match: A0A6J1KA74 (dof zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491503 PE=4 SV=1)

HSP 1 Score: 246 bits (628), Expect = 6.35e-81
Identity = 125/142 (88.03%), Postives = 129/142 (90.85%), Query Frame = 0


Query: 15  GGGGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRK 74
           GGGGSSSSSSKGNH LERKVRP+KEQAL CPRCNSANTKFCYYNNYSLSQPRYFCKACRK
Sbjct: 32  GGGGSSSSSSKGNHVLERKVRPQKEQALSCPRCNSANTKFCYYNNYSLSQPRYFCKACRK 91

Query: 75  YWTDGSSLRNVPVGGGSRKNRRSSFSSSS---ADDDRKIDTHHPIPASSTTSPHLFGSFM 134
           YWT GSSLRNVPVGGGSRKNRRSSFSSSS   ADDDR IDTHHPIPASSTT+ HLF SFM
Sbjct: 92  YWTVGSSLRNVPVGGGSRKNRRSSFSSSSSSSADDDRNIDTHHPIPASSTTTTHLFYSFM 151

Query: 135 AANGGGS---DDQTAVVFPAEK 150
           AANGGG    DDQTAV+FPAE+
Sbjct: 152 AANGGGGGGGDDQTAVMFPAEE 173

[Close]

BLAST of Csor.00g224100 vs. ExPASy TrEMBL
Match: A0A5D3C6H0 (Dof zinc finger protein DOF4.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00290 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 5.60e-48
Identity = 92/152 (60.53%), Postives = 106/152 (69.74%), Query Frame = 0


Query: 14  EGGGGSSSSSSK-------GNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPR 73
           EGGGGSSSS SK       GN+ LERKVR EKEQAL+CPRCNS+NTKFCYYNNYSLSQPR
Sbjct: 2   EGGGGSSSSCSKPNSGNGNGNNLLERKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPR 61

Query: 74  YFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSS--ADDDRKIDTHHPIP------- 133
           YFCKACR+YWT+G SLRNVPVGGGSRKN+RSS SSSS  +D ++KI+  H I        
Sbjct: 62  YFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSTSSDHNKKINASHQIINHQDLNL 121

[Close]

BLAST of Csor.00g224100 vs. ExPASy TrEMBL
Match: A0A0A0KJS3 (Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139210 PE=4 SV=1)

HSP 1 Score: 165 bits (418), Expect = 7.01e-48
Identity = 101/190 (53.16%), Postives = 116/190 (61.05%), Query Frame = 0


Query: 15  GGGGSSSSSSK--------GNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPR 74
           GGGGSSSS SK        GN+ LE+KVR EKEQAL+CPRCNS+NTKFCYYNNYSLSQPR
Sbjct: 11  GGGGSSSSCSKPNSGNNGNGNNLLEKKVRGEKEQALKCPRCNSSNTKFCYYNNYSLSQPR 70

Query: 75  YFCKACRKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDD--RKIDTHHPI-------- 134
           YFCKACR+YWT+G SLRNVPVGGGSRKN+RSS SSSS+  D  +KI+  H I        
Sbjct: 71  YFCKACRRYWTEGGSLRNVPVGGGSRKNKRSSLSSSSSSSDHNKKINASHQIINHQDLNL 130

Query: 135 --------------PASSTTSPHLFGSFMAA------NGGGSDDQTAVVFPAEKVELNRG 165
                           SS++S HL  SFM A      NG G      +  PA       G
Sbjct: 131 AIFPPNNNNNNTSISTSSSSSSHLLASFMTAPATGMFNGSGGFGLNELKPPASLSFSLEG 190

[Close]

BLAST of Csor.00g224100 vs. ExPASy TrEMBL
Match: A0A6J1C8S5 (dof zinc finger protein DOF4.6-like OS=Momordica charantia OX=3673 GN=LOC111009361 PE=4 SV=1)

HSP 1 Score: 164 bits (414), Expect = 7.71e-48
Identity = 100/208 (48.08%), Postives = 115/208 (55.29%), Query Frame = 0


Query: 18  GSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWT 77
           G+ +  SKGN  LERK RP KE+AL+CPRCNS+NTKFCYYNNYSLSQPRYFCKACR+YWT
Sbjct: 11  GAGAGGSKGN-LLERKARPAKEEALKCPRCNSSNTKFCYYNNYSLSQPRYFCKACRRYWT 70

Query: 78  DGSSLRNVPVGGGSRKNR-RSSFSSSSADDDRKIDTHHP-------IPAS---STTSPH- 137
           DG SLRNVPVGGGSRKN+ RS         D+    HH        +P+S   S++S H 
Sbjct: 71  DGGSLRNVPVGGGSRKNKIRSDHKIKINGSDQNPKIHHTQDLNLAILPSSTSSSSSSSHS 130

Query: 138 -LFGSFMAANGGG--------------------------SDDQTAVVFPAEKV------- 167
            L GSFMAA   G                            DQTA +FP E +       
Sbjct: 131 LLLGSFMAAPSAGLGFSLEGFENSGYGNLHHHHHQHQHQHQDQTAAMFPIEDLKQPNGAA 190

[Close]

BLAST of Csor.00g224100 vs. TAIR 10
Match: AT1G64620.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32
Identity = 65/101 (64.36%), Postives = 77/101 (76.24%), Query Frame = 0


Query: 30  LERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGG 89
           +ERK RPEK+QAL CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT G SLRN+PVGG
Sbjct: 37  VERKARPEKDQALNCPRCNSLNTKFCYYNNYSLTQPRYFCKDCRRYWTAGGSLRNIPVGG 96

Query: 90  GSRKNRRSSFSSSSADDDRKIDTHHPIPASSTTS----PHL 127
           G RKN+RSS +SSS+       +  P+ A++ T     PHL
Sbjct: 97  GVRKNKRSSSNSSSSSPSSSSSSKKPLFANNNTPTPPLPHL 137

[Close]

BLAST of Csor.00g224100 vs. TAIR 10
Match: AT4G24060.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 136.0 bits (341), Expect = 2.9e-32
Identity = 69/130 (53.08%), Postives = 82/130 (63.08%), Query Frame = 0


Query: 31  ERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYWTDGSSLRNVPVGGG 90
           ERK RPEK+QA+ CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YWT+G SLRN+PVGGG
Sbjct: 42  ERKARPEKDQAVNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNIPVGGG 101

Query: 91  SRKNRRSSFSSSSADDDRKIDTHHPIPASSTTSPHL---FGSFMAANGGGSDDQTAVVFP 150
           SRKN+RS  SSS       I  +H       T  HL       M+ +  G   Q      
Sbjct: 102 SRKNKRSHSSSSD------ISNNHSDSTQPATKKHLSDHHHHLMSMSQQGLTGQNPKFLE 161

Query: 151 AEKVELNRGY 158
             + +LN G+
Sbjct: 162 TTQQDLNLGF 165

[Close]

BLAST of Csor.00g224100 vs. TAIR 10
Match: AT2G46590.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-28
Identity = 73/138 (52.90%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 15  GGGGSSSSSSKGNHAL--ERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKAC 74
           G   S  S++  N A+  ERK RP+++  L CPRCNS NTKFCYYNNYSL+QPRYFCK C
Sbjct: 41  GATVSGVSNNNNNTAVVAERKARPQEK--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGC 100

Query: 75  RKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPAS--STTSPHLFGS- 134
           R+YWT+G SLRNVPVGG SRKN+RSS SSSS       +    IP+S      P LF + 
Sbjct: 101 RRYWTEGGSLRNVPVGGSSRKNKRSSSSSSS-------NILQTIPSSLPDLNPPILFSNQ 160

Query: 135 FMAANGGGSDDQTAVVFP 148
               + G S D   + FP
Sbjct: 161 IHNKSKGSSQDLNLLSFP 169

[Close]

BLAST of Csor.00g224100 vs. TAIR 10
Match: AT2G46590.2 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 123.2 bits (308), Expect = 1.9e-28
Identity = 73/138 (52.90%), Postives = 88/138 (63.77%), Query Frame = 0


Query: 15  GGGGSSSSSSKGNHAL--ERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKAC 74
           G   S  S++  N A+  ERK RP+++  L CPRCNS NTKFCYYNNYSL+QPRYFCK C
Sbjct: 53  GATVSGVSNNNNNTAVVAERKARPQEK--LNCPRCNSTNTKFCYYNNYSLTQPRYFCKGC 112

Query: 75  RKYWTDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPAS--STTSPHLFGS- 134
           R+YWT+G SLRNVPVGG SRKN+RSS SSSS       +    IP+S      P LF + 
Sbjct: 113 RRYWTEGGSLRNVPVGGSSRKNKRSSSSSSS-------NILQTIPSSLPDLNPPILFSNQ 172

Query: 135 FMAANGGGSDDQTAVVFP 148
               + G S D   + FP
Sbjct: 173 IHNKSKGSSQDLNLLSFP 181

[Close]

BLAST of Csor.00g224100 vs. TAIR 10
Match: AT3G61850.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 120.9 bits (302), Expect = 9.5e-28
Identity = 60/104 (57.69%), Postives = 75/104 (72.12%), Query Frame = 0


Query: 17  GGSSSSSSKGNHALERKVRPEKEQALRCPRCNSANTKFCYYNNYSLSQPRYFCKACRKYW 76
           GGS  +++       RK RP+++  + CPRCNS NTKFCYYNNYSL+QPRYFCK CR+YW
Sbjct: 51  GGSGGNTNNTATMETRKARPQEK--VNCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYW 110

Query: 77  TDGSSLRNVPVGGGSRKNRRSSFSSSSADDDRKIDTHHPIPASS 121
           T+G SLRNVPVGG SRKN+RSS   +S  + +  D + PI  SS
Sbjct: 111 TEGGSLRNVPVGGSSRKNKRSSTPLASPSNPKLPDLNPPILFSS 152

The following BLAST results are available for this feature:

BLAST of Csor.00g224100 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SXG8	7.3e-33	54.41	Dof zinc finger protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF1 PE=2 ...	[more]
Q84JQ8	4.0e-31	64.36	Dof zinc finger protein DOF1.8 OS=Arabidopsis thaliana OX=3702 GN=DOF1.8 PE=2 SV...	[more]
Q8LAP8	4.0e-31	53.08	Dof zinc finger protein DOF4.6 OS=Arabidopsis thaliana OX=3702 GN=DOF4.6 PE=2 SV...	[more]
B9F1L8	9.9e-30	68.24	Dof zinc finger protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DOF2 PE=2 ...	[more]
Q9ZPY0	2.7e-27	52.90	Dof zinc finger protein DOF2.5 OS=Arabidopsis thaliana OX=3702 GN=DOF2.5 PE=2 SV...	[more]

BLAST of Csor.00g224100 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6605798.1	1.35e-119	100.00	Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7035762.1	5.00e-109	100.00	Dof zinc finger protein DOF4.6, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
XP_022958525.1	2.32e-97	90.97	dof zinc finger protein 1-like [Cucurbita moschata]	[more]
XP_022996208.1	1.31e-80	88.03	dof zinc finger protein 1-like [Cucurbita maxima]	[more]
XP_038906804.1	1.98e-51	44.62	dof zinc finger protein DOF4.6-like [Benincasa hispida]	[more]

BLAST of Csor.00g224100 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H3S0	1.12e-97	90.97	dof zinc finger protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111459730 PE=...	[more]
A0A6J1KA74	6.35e-81	88.03	dof zinc finger protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111491503 PE=4 ...	[more]
A0A5D3C6H0	5.60e-48	60.53	Dof zinc finger protein DOF4.6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A0A0KJS3	7.01e-48	53.16	Dof-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G139210 PE...	[more]
A0A6J1C8S5	7.71e-48	48.08	dof zinc finger protein DOF4.6-like OS=Momordica charantia OX=3673 GN=LOC1110093...	[more]

BLAST of Csor.00g224100 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64620.1	2.9e-32	64.36	Dof-type zinc finger DNA-binding family protein	[more]
AT4G24060.1	2.9e-32	53.08	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.1	1.9e-28	52.90	Dof-type zinc finger DNA-binding family protein	[more]
AT2G46590.2	1.9e-28	52.90	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.1	9.5e-28	57.69	Dof-type zinc finger DNA-binding family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 40..96 e-value: 1.0E-31 score: 108.9
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 42..96 score: 28.015289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 9..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..123
None	No IPR available	PANTHER	PTHR31992:SF124	DOF ZINC FINGER PROTEIN DOF1.8	coord: 24..113
None	No IPR available	PANTHER	PTHR31992	DOF ZINC FINGER PROTEIN DOF1.4-RELATED	coord: 24..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g224100.m01	Csor.00g224100.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding