Csor.00g223920 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g223920
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Mitochondrial import inner membrane translocase subunit TIM22-like
Location	Csor_Chr02: 7151990 .. 7154960 (+)
RNA-Seq Expression	Csor.00g223920
Synteny	Csor.00g223920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGCAGGGGAAGCAGGGAGTGGTAGTTAAATTGAGCCCTCCACAGAACCCATTGGAGCAGGTTCAGGCTCGTTTCAAGGAACTTGAAAATGGGTTCAGAACATGGTTGGCCAAGCAGTCTCTCCCCGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCCGCACAGGGCGCTGCTATTGGTGGCTTTATGGGCGTTCTCACCAACGACGTTTCTTCGTCTCTGCCCACTCCTCAAGCCGGCCTCAACCCTCAAGCCATGGCCTCTTTCAAGCAAGCTCAGGTCCTATTTTGGTTCCCCCTATTCGTTGTTTGATTTTATAATTTTTTCCTGATTGAAATGTGAGAACTGTCTTATTTGTTGAAATTCTGTAGTTTTATGAACAAAAGTGGAATTTGGGGGAGCTGATTCTTGTAGTTTTCTTATGAATTGCAGGCTCTTGCTGGAGGTCCCTTGGTGCAAGCTCGCAACTTCGCCGTGATGACCGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGATGTTCAGTCAAGGTAAGGTTTTACGAAGTCTCTGCGTTTCCTTTTCCTTGTCGATTATTTATAAGGGTGTGGAAACCTCTCTCCAGCAAACGTGTTTTAGAAACCTAGAGGGGAAGCACAAAGAGAACAATATCTCTAGTGGTGAGCTTGGGCCGTTAGAAATGATATTAGAGGTAGACACTGGGCGATGTGCTAACATGGAGGTTGAGCCCCAAAGGGAGTGGACAAGGACGCTGGGCCCCGAAGGGGATGGGTTAGGGTGTCCAACATTGATTGGAGAAGGGAATGAGTGCTTGCAAGAACACTGGGCCTTGAAGGAGATAGATTGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATTCTTTATATGGGTGTGGAAATCTCTCCCTAGCAGATGCGTTTTAAGAACCTTGAGGGGAAACCCAAAAGGGAAAGCCGAAAGAGAACAATATCTACTAGCGGTGAACTTGGGCTGTTATAAGTGGTATTAGAGCTAGACACCGGACGATGAGCCAGCGAGGAGGCTGAACCCCAAAGGGGGTGGACACGAGGTGGTGTGCCAGCAAAGACACTGGCTCCGAAGGGGGTGGATTGAGGCTAGTAGATTTCAACTCATTTTCTTTATGTTAAAGATTCAGATTTGACATTGGAGAATGGGTTGGGAGAGTTTCATTTGGTGAGTTGATTATGGTTTCTAGACCCTTGGATCTCAAGGGTTGTTAAAATCTTAATAGCGTGTTTGAAGGCTTGGATCGTGTTGTTTGGGATTATTGGTGTAACGACCTATGCCCAAGATTTGGAATTTGGGCACTTGATAGCCTCGACATTTCCTTGCATCCCCTGCGACGTGGTCATGTTACTTCTCGCTTCTAAGAGTGAAGATGCTCCCTACAGACCAACATGAGTCCTTCCAAAATCCTTTATCCTCACTAATATGCACCCAACATAGAATTTCTCCAAGCAAAACACACTTAACCATAGAGTTCCTACGATAGAGCTACAAAAAAGGAAGGTGCACCATGTTGGTATAGATAGTAATGTTCATTTCCTTTAAGCCTTTTTTAGTCATTCTATCCTCAGGATTCCTCTCGTTCGGATTTGGTTTCAGTTCATTCATGTACCCCCTCTTTTACTCAAGTGTCACATGCCCACCAACTTTCGCCTTGGTTCGTCCGCGAACCACATCTTACAGGGAGAGGTATCGCTTTGATACCATTTGTAACGACCCATGCCCAAGATTCATATCAAGATTTGAAATCCAGATTCGACACTTGATGACCCCGGCATTTCCCTACGACATGGTTATGGTACTTCCCACTTTTAAGAGTGAAGACTATCCCCTGTGCTTAGTGCTTAGGCTGACTTCCTTGTTACCTTTTGGGGTCTGTGATTTGAAATAAACAACAGTGTTTAGGGACGCGGAGAGGTGCTGGGAGTAGGTTTGGTCATAACTGAAGCCTAACGCCTCTGTTTGGGCGTAGGTTCGGTCATAACTGAAGCCTAACGCCTCTGTTTGGGCGTCAGTCTCGAAGGATCTTTATGGTTACCCATTCGGTTTCGTCACGTGGAATTGGAGCCATTTTTTGTATAGCTAGTTTCTTGCCTCCTTCTATTAGTAGCCTATAATAAATATCAGAAGGGCATAGTTCTTGTAGCCAACTAGTTTTAGTTTGTTTCCATGTTGCATATAGTAACCTCTTAGCTCTATTTAGACTGCTCGTTTGTTTCCTGAACTCGACCAATACGATTTTACTTGCTATTCCAGCATGGTGGCTGCTTTTGGATCTGGGGCCATGTTTTCGTTGGTGAGCGGAATGGGAGGCCCGAATCAGGTGGCAAACGCCGTCACCTCGGGTCTTTTTTTCTCGCTCGTTCAAGGTGGACTCTTCAAGGTATGCATCAATAACAACTGTTCTATTATTCTGATAAATTTCAAGCATTTCAAGCTCGTCCTCGGCTGTTCCTTTGTTCTTATACCAAAATTTGGAACTTGTTTAAGAATCAATGGTGTTTTTCAGTTAGGCGAAAAGTATTCTAAGCCACCTGCGGAAGACGTGTTCTACGCTAAAACCCGAAGCATGTTGAGTAACCTTGGCCTTGCTAGCTATGAGAAGAATTTCAAGAAAGGCTTATTGACTGATAGCACATTGCCTCTGCTCACTGATAGGCATGTATATTGAATTCATGTTTTCATACTTATGGTTATAATCAATGCATTGGCTAAGTGTGTATACCCTTCTGCTTTGACGTGTGCCAGTGCGCTTAGAGACGTTAAGATCCCCCCGGGACCGAGGCTTTTGATTCTTGATCACATTCAGAGGTTTTAATCGAGCTCTATAACAAAGTTCTTGTTGCTTCCATTGTTCTATGTCGTCTCGTTTATGGCTAACTTTTGATTTCAGGAATGCCGAGCTACGAGAGAGATGA

mRNA sequence

ATGGAGCAGGGGAAGCAGGGAGTGGTAGTTAAATTGAGCCCTCCACAGAACCCATTGGAGCAGGTTCAGGCTCGTTTCAAGGAACTTGAAAATGGGTTCAGAACATGGTTGGCCAAGCAGTCTCTCCCCGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCCGCACAGGGCGCTGCTATTGGTGGCTTTATGGGCGTTCTCACCAACGACGTTTCTTCGTCTCTGCCCACTCCTCAAGCCGGCCTCAACCCTCAAGCCATGGCCTCTTTCAAGCAAGCTCAGGCTCTTGCTGGAGGTCCCTTGGTGCAAGCTCGCAACTTCGCCGTGATGACCGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGATGTTCAGTCAAGCATGGTGGCTGCTTTTGGATCTGGGGCCATGTTTTCGTTGGTGAGCGGAATGGGAGGCCCGAATCAGGTGGCAAACGCCGTCACCTCGGGTCTTTTTTTCTCGCTCGTTCAAGGTGGACTCTTCAAGTTAGGCGAAAAGTATTCTAAGCCACCTGCGGAAGACGTGTTCTACGCTAAAACCCGAAGCATGTTGAGTAACCTTGGCCTTGCTAGCTATGAGAAGAATTTCAAGAAAGGCTTATTGACTGATAGCACATTGCCTCTGCTCACTGATAGTGCGCTTAGAGACGTTAAGATCCCCCCGGGACCGAGGCTTTTGATTCTTGATCACATTCAGAGGAATGCCGAGCTACGAGAGAGATGA

Coding sequence (CDS)

ATGGAGCAGGGGAAGCAGGGAGTGGTAGTTAAATTGAGCCCTCCACAGAACCCATTGGAGCAGGTTCAGGCTCGTTTCAAGGAACTTGAAAATGGGTTCAGAACATGGTTGGCCAAGCAGTCTCTCCCCGTTGAGGCCGCTGTTGTCACCGCCACCAGCGCCGCACAGGGCGCTGCTATTGGTGGCTTTATGGGCGTTCTCACCAACGACGTTTCTTCGTCTCTGCCCACTCCTCAAGCCGGCCTCAACCCTCAAGCCATGGCCTCTTTCAAGCAAGCTCAGGCTCTTGCTGGAGGTCCCTTGGTGCAAGCTCGCAACTTCGCCGTGATGACCGGTGTTAATGCAGGCATATCTTCTGTTATGAAGAGATTGAGAGGCAAGGAGGATGTTCAGTCAAGCATGGTGGCTGCTTTTGGATCTGGGGCCATGTTTTCGTTGGTGAGCGGAATGGGAGGCCCGAATCAGGTGGCAAACGCCGTCACCTCGGGTCTTTTTTTCTCGCTCGTTCAAGGTGGACTCTTCAAGTTAGGCGAAAAGTATTCTAAGCCACCTGCGGAAGACGTGTTCTACGCTAAAACCCGAAGCATGTTGAGTAACCTTGGCCTTGCTAGCTATGAGAAGAATTTCAAGAAAGGCTTATTGACTGATAGCACATTGCCTCTGCTCACTGATAGTGCGCTTAGAGACGTTAAGATCCCCCCGGGACCGAGGCTTTTGATTCTTGATCACATTCAGAGGAATGCCGAGCTACGAGAGAGATGA

Protein sequence

MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAIGGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKYSKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLILDHIQRNAELRER

Homology

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BLAST of Csor.00g223920 vs. ExPASy Swiss-Prot
Match: Q9FLT9 (Chloroplastic import inner membrane translocase subunit HP30-2 OS=Arabidopsis thaliana OX=3702 GN=HP30-2 PE=1 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 1.6e-79
Identity = 156/244 (63.93%), Postives = 188/244 (77.05%), Query Frame = 0


Query: 8   VVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAIGGFMGVL 67
           V+  +   QNP++Q Q +FKE+E GF++WL+KQ LPVEAAVVTA    QGA IGG MG L
Sbjct: 16  VMSLMKDQQNPIQQFQVKFKEIETGFKSWLSKQKLPVEAAVVTAMGGVQGAFIGGLMGTL 75

Query: 68  TNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGK 127
           + ++      PQAG++PQAMAS KQ QAL GGPLVQARNFA +TGVNAGI+ VMKR+RGK
Sbjct: 76  SPEM------PQAGIDPQAMASLKQTQALVGGPLVQARNFAAITGVNAGIACVMKRIRGK 135

Query: 128 EDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKYSKPPAED 187
           ED++S++VAAFGSG  +SLVS  G   Q  NA+T+   F++ QG  FKLGE++SKP  ED
Sbjct: 136 EDLESAVVAAFGSGVAYSLVSA-GLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSVED 195

Query: 188 VFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLILDHIQRN 247
            +Y + RSML  LGL  YEKNFKKGLL D TLPLLTDSALRDV IPPGPRLLILDHIQR+
Sbjct: 196 PYYTRGRSMLLKLGLEKYEKNFKKGLLADPTLPLLTDSALRDVSIPPGPRLLILDHIQRD 252

Query: 248 AELR 252
            EL+
Sbjct: 256 PELK 252

[Close]

BLAST of Csor.00g223920 vs. ExPASy Swiss-Prot
Match: Q9SCK3 (Chloroplastic import inner membrane translocase subunit HP30-1 OS=Arabidopsis thaliana OX=3702 GN=HP30-1 PE=1 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 9.6e-77
Identity = 149/236 (63.14%), Postives = 185/236 (78.39%), Query Frame = 0


Query: 16  QNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAIGGFMGVLTNDVSSSL 75
           QNP++Q Q +FKE+E  F+TWL+KQS+PVEAAVV+  S  QGA IGG MG L+ ++    
Sbjct: 29  QNPIQQFQVKFKEVETNFKTWLSKQSIPVEAAVVSTMSGVQGAFIGGLMGTLSPEM---- 88

Query: 76  PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMV 135
             PQAG++PQA+AS KQAQAL GGP VQARNFA +TGVNAGI+SVMKR+RGKED++S++V
Sbjct: 89  --PQAGVDPQAIASMKQAQALVGGPWVQARNFAAITGVNAGIASVMKRIRGKEDIESAVV 148

Query: 136 AAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKYSKPPAEDVFYAKTRS 195
           AA GSG  +SLVS  G   Q  NA+T+   F++ QG  FKLGE++SKP  ED F+ + R+
Sbjct: 149 AALGSGFAYSLVS-QGLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSTEDPFFTRGRT 208

Query: 196 MLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLILDHIQRNAELR 252
           ML  LGL  YEKNFKKGLLTD TLPLLTDSAL+D  IPPGPRL+ILDHIQR+ E++
Sbjct: 209 MLVKLGLEKYEKNFKKGLLTDPTLPLLTDSALKDANIPPGPRLMILDHIQRDPEIK 257

[Close]

BLAST of Csor.00g223920 vs. NCBI nr
Match: XP_022957696.1 (uncharacterized protein LOC111459161 [Cucurbita moschata] >XP_023534791.1 uncharacterized protein LOC111796261 [Cucurbita pepo subsp. pepo] >KAG6605816.1 Chloroplastic import inner membrane translocase subunit HP30-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 479 bits (1232), Expect = 5.98e-170
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRNAELRER
Sbjct: 241 LDHIQRNAELRER 253

[Close]

BLAST of Csor.00g223920 vs. NCBI nr
Match: XP_022996116.1 (uncharacterized protein LOC111491434 [Cucurbita maxima])

HSP 1 Score: 475 bits (1222), Expect = 2.00e-168
Identity = 251/253 (99.21%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQG QGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGNQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           SKPPAEDVFYAKTRSMLSNLGL SYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SKPPAEDVFYAKTRSMLSNLGLQSYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRNAELRER
Sbjct: 241 LDHIQRNAELRER 253

[Close]

BLAST of Csor.00g223920 vs. NCBI nr
Match: XP_008437651.1 (PREDICTED: uncharacterized protein LOC103482996 [Cucumis melo] >TYK05925.1 mitochondrial import inner membrane translocase subunit TIM22-like [Cucumis melo var. makuwa])

HSP 1 Score: 460 bits (1183), Expect = 1.76e-162
Identity = 239/253 (94.47%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL+PPQNPLEQ+QARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQ ANAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           S+PP EDV+YAKTRSML+NLGL SYEKNFKKGLLTD+TLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRN ELR+R
Sbjct: 241 LDHIQRNPELRDR 253

[Close]

BLAST of Csor.00g223920 vs. NCBI nr
Match: XP_038876132.1 (chloroplastic import inner membrane translocase subunit HP30-2-like [Benincasa hispida])

HSP 1 Score: 460 bits (1183), Expect = 1.89e-162
Identity = 239/253 (94.47%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL+PPQNP+EQ+QARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPVEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQ ANAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           S+PP EDV+YAKTRSML+NLGL SYEKNFKKGLLTD+TLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRN ELRER
Sbjct: 241 LDHIQRNPELRER 253

[Close]

BLAST of Csor.00g223920 vs. NCBI nr
Match: XP_022138075.1 (uncharacterized protein LOC111009335 isoform X1 [Momordica charantia])

HSP 1 Score: 455 bits (1171), Expect = 1.28e-160
Identity = 236/253 (93.28%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGV+VKL+PPQNPLEQ+QARFKELE+GF++WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVLVKLNPPQNPLEQIQARFKELESGFKSWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPL+QARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLIQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGE++
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGERF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           S+PPAEDV+YAKTRSML+NLGL SYEKNFK+GLLTDSTLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SQPPAEDVYYAKTRSMLNNLGLPSYEKNFKRGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRN ELR R
Sbjct: 241 LDHIQRNPELRGR 253

[Close]

BLAST of Csor.00g223920 vs. ExPASy TrEMBL
Match: A0A6J1GZY7 (uncharacterized protein LOC111459161 OS=Cucurbita moschata OX=3662 GN=LOC111459161 PE=4 SV=1)

HSP 1 Score: 479 bits (1232), Expect = 2.90e-170
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRNAELRER
Sbjct: 241 LDHIQRNAELRER 253

[Close]

BLAST of Csor.00g223920 vs. ExPASy TrEMBL
Match: A0A6J1K3T6 (uncharacterized protein LOC111491434 OS=Cucurbita maxima OX=3661 GN=LOC111491434 PE=4 SV=1)

HSP 1 Score: 475 bits (1222), Expect = 9.68e-169
Identity = 251/253 (99.21%), Postives = 251/253 (99.21%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQG QGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGNQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           SKPPAEDVFYAKTRSMLSNLGL SYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SKPPAEDVFYAKTRSMLSNLGLQSYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRNAELRER
Sbjct: 241 LDHIQRNAELRER 253

[Close]

BLAST of Csor.00g223920 vs. ExPASy TrEMBL
Match: A0A5D3C3H2 (Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00170 PE=4 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 8.52e-163
Identity = 239/253 (94.47%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL+PPQNPLEQ+QARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQ ANAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           S+PP EDV+YAKTRSML+NLGL SYEKNFKKGLLTD+TLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRN ELR+R
Sbjct: 241 LDHIQRNPELRDR 253

[Close]

BLAST of Csor.00g223920 vs. ExPASy TrEMBL
Match: A0A1S3AV59 (uncharacterized protein LOC103482996 OS=Cucumis melo OX=3656 GN=LOC103482996 PE=4 SV=1)

HSP 1 Score: 460 bits (1183), Expect = 8.52e-163
Identity = 239/253 (94.47%), Postives = 248/253 (98.02%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGVVVKL+PPQNPLEQ+QARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVVVKLTPPQNPLEQIQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQ ANAVTSGLFF+LVQGGLFKLGEK+
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQAANAVTSGLFFALVQGGLFKLGEKF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           S+PP EDV+YAKTRSML+NLGL SYEKNFKKGLLTD+TLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SQPPVEDVYYAKTRSMLNNLGLQSYEKNFKKGLLTDTTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRN ELR+R
Sbjct: 241 LDHIQRNPELRDR 253

[Close]

BLAST of Csor.00g223920 vs. ExPASy TrEMBL
Match: A0A6J1C8F0 (uncharacterized protein LOC111009335 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009335 PE=4 SV=1)

HSP 1 Score: 455 bits (1171), Expect = 6.18e-161
Identity = 236/253 (93.28%), Postives = 249/253 (98.42%), Query Frame = 0


Query: 1   MEQGKQGVVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAI 60
           MEQGKQGV+VKL+PPQNPLEQ+QARFKELE+GF++WLAKQSLPVEAAVVTATSAAQGAAI
Sbjct: 1   MEQGKQGVLVKLNPPQNPLEQIQARFKELESGFKSWLAKQSLPVEAAVVTATSAAQGAAI 60

Query: 61  GGFMGVLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSV 120
           GGFMG LTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPL+QARNFAVMTGVNAGISSV
Sbjct: 61  GGFMGTLTNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLIQARNFAVMTGVNAGISSV 120

Query: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKY 180
           MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGE++
Sbjct: 121 MKRLRGKEDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGERF 180

Query: 181 SKPPAEDVFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240
           S+PPAEDV+YAKTRSML+NLGL SYEKNFK+GLLTDSTLPLLTDSALRDVKIPPGPRLLI
Sbjct: 181 SQPPAEDVYYAKTRSMLNNLGLPSYEKNFKRGLLTDSTLPLLTDSALRDVKIPPGPRLLI 240

Query: 241 LDHIQRNAELRER 253
           LDHIQRN ELR R
Sbjct: 241 LDHIQRNPELRGR 253

[Close]

BLAST of Csor.00g223920 vs. TAIR 10
Match: AT5G24650.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 297.4 bits (760), Expect = 1.1e-80
Identity = 156/244 (63.93%), Postives = 188/244 (77.05%), Query Frame = 0


Query: 8   VVVKLSPPQNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAIGGFMGVL 67
           V+  +   QNP++Q Q +FKE+E GF++WL+KQ LPVEAAVVTA    QGA IGG MG L
Sbjct: 16  VMSLMKDQQNPIQQFQVKFKEIETGFKSWLSKQKLPVEAAVVTAMGGVQGAFIGGLMGTL 75

Query: 68  TNDVSSSLPTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGK 127
           + ++      PQAG++PQAMAS KQ QAL GGPLVQARNFA +TGVNAGI+ VMKR+RGK
Sbjct: 76  SPEM------PQAGIDPQAMASLKQTQALVGGPLVQARNFAAITGVNAGIACVMKRIRGK 135

Query: 128 EDVQSSMVAAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKYSKPPAED 187
           ED++S++VAAFGSG  +SLVS  G   Q  NA+T+   F++ QG  FKLGE++SKP  ED
Sbjct: 136 EDLESAVVAAFGSGVAYSLVSA-GLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSVED 195

Query: 188 VFYAKTRSMLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLILDHIQRN 247
            +Y + RSML  LGL  YEKNFKKGLL D TLPLLTDSALRDV IPPGPRLLILDHIQR+
Sbjct: 196 PYYTRGRSMLLKLGLEKYEKNFKKGLLADPTLPLLTDSALRDVSIPPGPRLLILDHIQRD 252

Query: 248 AELR 252
            EL+
Sbjct: 256 PELK 252

[Close]

BLAST of Csor.00g223920 vs. TAIR 10
Match: AT3G49560.1 (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein )

HSP 1 Score: 288.1 bits (736), Expect = 6.8e-78
Identity = 149/236 (63.14%), Postives = 185/236 (78.39%), Query Frame = 0


Query: 16  QNPLEQVQARFKELENGFRTWLAKQSLPVEAAVVTATSAAQGAAIGGFMGVLTNDVSSSL 75
           QNP++Q Q +FKE+E  F+TWL+KQS+PVEAAVV+  S  QGA IGG MG L+ ++    
Sbjct: 29  QNPIQQFQVKFKEVETNFKTWLSKQSIPVEAAVVSTMSGVQGAFIGGLMGTLSPEM---- 88

Query: 76  PTPQAGLNPQAMASFKQAQALAGGPLVQARNFAVMTGVNAGISSVMKRLRGKEDVQSSMV 135
             PQAG++PQA+AS KQAQAL GGP VQARNFA +TGVNAGI+SVMKR+RGKED++S++V
Sbjct: 89  --PQAGVDPQAIASMKQAQALVGGPWVQARNFAAITGVNAGIASVMKRIRGKEDIESAVV 148

Query: 136 AAFGSGAMFSLVSGMGGPNQVANAVTSGLFFSLVQGGLFKLGEKYSKPPAEDVFYAKTRS 195
           AA GSG  +SLVS  G   Q  NA+T+   F++ QG  FKLGE++SKP  ED F+ + R+
Sbjct: 149 AALGSGFAYSLVS-QGLQGQPMNAITTAAGFAVFQGVFFKLGERFSKPSTEDPFFTRGRT 208

Query: 196 MLSNLGLASYEKNFKKGLLTDSTLPLLTDSALRDVKIPPGPRLLILDHIQRNAELR 252
           ML  LGL  YEKNFKKGLLTD TLPLLTDSAL+D  IPPGPRL+ILDHIQR+ E++
Sbjct: 209 MLVKLGLEKYEKNFKKGLLTDPTLPLLTDSALKDANIPPGPRLMILDHIQRDPEIK 257

The following BLAST results are available for this feature:

BLAST of Csor.00g223920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLT9	1.6e-79	63.93	Chloroplastic import inner membrane translocase subunit HP30-2 OS=Arabidopsis th...	[more]
Q9SCK3	9.6e-77	63.14	Chloroplastic import inner membrane translocase subunit HP30-1 OS=Arabidopsis th...	[more]

BLAST of Csor.00g223920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022957696.1	5.98e-170	100.00	uncharacterized protein LOC111459161 [Cucurbita moschata] >XP_023534791.1 unchar...	[more]
XP_022996116.1	2.00e-168	99.21	uncharacterized protein LOC111491434 [Cucurbita maxima]	[more]
XP_008437651.1	1.76e-162	94.47	PREDICTED: uncharacterized protein LOC103482996 [Cucumis melo] >TYK05925.1 mitoc...	[more]
XP_038876132.1	1.89e-162	94.47	chloroplastic import inner membrane translocase subunit HP30-2-like [Benincasa h...	[more]
XP_022138075.1	1.28e-160	93.28	uncharacterized protein LOC111009335 isoform X1 [Momordica charantia]	[more]

BLAST of Csor.00g223920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GZY7	2.90e-170	100.00	uncharacterized protein LOC111459161 OS=Cucurbita moschata OX=3662 GN=LOC1114591...	[more]
A0A6J1K3T6	9.68e-169	99.21	uncharacterized protein LOC111491434 OS=Cucurbita maxima OX=3661 GN=LOC111491434...	[more]
A0A5D3C3H2	8.52e-163	94.47	Mitochondrial import inner membrane translocase subunit TIM22-like OS=Cucumis me...	[more]
A0A1S3AV59	8.52e-163	94.47	uncharacterized protein LOC103482996 OS=Cucumis melo OX=3656 GN=LOC103482996 PE=...	[more]
A0A6J1C8F0	6.18e-161	93.28	uncharacterized protein LOC111009335 isoform X1 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Csor.00g223920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G24650.1	1.1e-80	63.93	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]
AT3G49560.1	6.8e-78	63.14	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001660	Sterile alpha motif domain	PFAM	PF00536	SAM_1	coord: 197..246 e-value: 7.2E-6 score: 26.4
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 193..253 e-value: 2.6E-8 score: 35.5
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 192..246
None	No IPR available	PFAM	PF02466	Tim17	coord: 50..166 e-value: 8.1E-10 score: 39.1
None	No IPR available	PANTHER	PTHR14110:SF6	CHLOROPLASTIC IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT HP30-2	coord: 1..246
None	No IPR available	CDD	cd09487	SAM_superfamily	coord: 195..246 e-value: 2.0333E-11 score: 55.7085
IPR039175	Mitochondrial import inner membrane translocase subunit TIM22	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 1..246

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g223920.m01	Csor.00g223920.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045039	protein insertion into mitochondrial inner membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0042721	TIM22 mitochondrial import inner membrane insertion complex
molecular_function	GO:0005515	protein binding