Csor.00g223880 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGGTGAAGTTGGTGCCAGCAGGGATGGGGCAGGTGGTCCCGGGAAGGCCGTCTTGCCAGCAATTCTTCCTGTGTTGGATGCCGCTCCAATGAATGAGGAAGGGCTCGTCCAGGTGGTTGAAGATGTTGACAACGACGTTGTTGTTGGTGGTGGAGTTGATGTTAGGGCCGGGGAACTCGCCGTTGATGAGTATGCCTTGCTGGGGGACGCCAAGCGGAGAGATGGTGCCGTAGGTGACCTTCCAAGTGAAGAAGAGGTAAGGATCTTCGGCGCGGACCGTCCAGAGCGATGCAGCGGAGAGACAGAGCAGGAGGGCAAACAAGAACAACCCAGAACCCATTTTGGTTCTTCCCTATGGTTTGGAACTTGA ATGGTAGGTGAAGTTGGTGCCAGCAGGGATGGGGCAGGTGGTCCCGGGAAGGCCGTCTTGCCAGCAATTCTTCCTGTGTTGGATGCCGCTCCAATGAATGAGGAAGGGCTCGTCCAGGTGGTTGAAGATGTTGACAACGACGTTGTTGTTGGTGGTGGAGTTGATGTTAGGGCCGGGGAACTCGCCGTTGATGAGTATGCCTTGCTGGGGGACGCCAAGCGGAGAGATGGTGCCGTAGGTGACCTTCCAAGTGAAGAAGAGGTAAGGATCTTCGGCGCGGACCGTCCAGAGCGATGCAGCGGAGAGACAGAGCAGGAGGGCAAACAAGAACAACCCAGAACCCATTTTGGTTCTTCCCTATGGTTTGGAACTTGA ATGGTAGGTGAAGTTGGTGCCAGCAGGGATGGGGCAGGTGGTCCCGGGAAGGCCGTCTTGCCAGCAATTCTTCCTGTGTTGGATGCCGCTCCAATGAATGAGGAAGGGCTCGTCCAGGTGGTTGAAGATGTTGACAACGACGTTGTTGTTGGTGGTGGAGTTGATGTTAGGGCCGGGGAACTCGCCGTTGATGAGTATGCCTTGCTGGGGGACGCCAAGCGGAGAGATGGTGCCGTAGGTGACCTTCCAAGTGAAGAAGAGGTAAGGATCTTCGGCGCGGACCGTCCAGAGCGATGCAGCGGAGAGACAGAGCAGGAGGGCAAACAAGAACAACCCAGAACCCATTTTGGTTCTTCCCTATGGTTTGGAACTTGA MVGEVGASRDGAGGPGKAVLPAILPVLDAAPMNEEGLVQVVEDVDNDVVVGGGVDVRAGELAVDEYALLGDAKRRDGAVGDLPSEEEVRIFGADRPERCSGETEQEGKQEQPRTHFGSSLWFGT Homology
BLAST of Csor.00g223880 vs. NCBI nr
Match: KAG6605820.1 (hypothetical protein SDJN03_03137, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 246 bits (629), Expect = 2.93e-82 Identity = 124/124 (100.00%), Postives = 124/124 (100.00%), Query Frame = 0
BLAST of Csor.00g223880 vs. NCBI nr
Match: KAG6388164.1 (hypothetical protein SASPL_153363 [Salvia splendens]) HSP 1 Score: 107 bits (268), Expect = 6.27e-26 Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of Csor.00g223880 vs. NCBI nr
Match: GER50709.1 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Striga asiatica]) HSP 1 Score: 110 bits (274), Expect = 4.65e-25 Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 0
BLAST of Csor.00g223880 vs. NCBI nr
Match: OAY79989.1 (hypothetical protein ACMD2_04951, partial [Ananas comosus]) HSP 1 Score: 102 bits (255), Expect = 1.31e-22 Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Csor.00g223880 vs. NCBI nr
Match: ACR35305.1 (unknown [Zea mays]) HSP 1 Score: 92.0 bits (227), Expect = 9.71e-19 Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 0
BLAST of Csor.00g223880 vs. ExPASy TrEMBL
Match: A0A4D9A2T6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_023851 PE=4 SV=1) HSP 1 Score: 107 bits (268), Expect = 3.04e-26 Identity = 60/107 (56.07%), Postives = 75/107 (70.09%), Query Frame = 0
BLAST of Csor.00g223880 vs. ExPASy TrEMBL
Match: A0A5A7R004 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Striga asiatica OX=4170 GN=STAS_28030 PE=4 SV=1) HSP 1 Score: 110 bits (274), Expect = 2.25e-25 Identity = 60/107 (56.07%), Postives = 77/107 (71.96%), Query Frame = 0
BLAST of Csor.00g223880 vs. ExPASy TrEMBL
Match: A0A199VSF6 (Uncharacterized protein (Fragment) OS=Ananas comosus OX=4615 GN=ACMD2_04951 PE=4 SV=1) HSP 1 Score: 102 bits (255), Expect = 6.36e-23 Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 0
BLAST of Csor.00g223880 vs. ExPASy TrEMBL
Match: C4J2A5 (Uncharacterized protein OS=Zea mays OX=4577 PE=2 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 4.70e-19 Identity = 56/109 (51.38%), Postives = 73/109 (66.97%), Query Frame = 0
BLAST of Csor.00g223880 vs. ExPASy TrEMBL
Match: A0A426ZLH2 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=B296_00026448 PE=4 SV=1) HSP 1 Score: 85.9 bits (211), Expect = 1.52e-18 Identity = 50/85 (58.82%), Postives = 60/85 (70.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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