Csor.00g223760 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g223760
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 7236502 .. 7238709 (+)
RNA-Seq ExpressionCsor.00g223760
SyntenyCsor.00g223760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATCGCAATGCATTGCACGATCTCCCGATCGCCTCACCAGCCACCAACTTCTTTATGTTCTCTTCAGCTACCCTCTTCAACAGCTCTCTCGCCTCGCCCTCTCTATATGGACTTTCTTATGCGTTCCTCCACCGGGTTCCTTCTACTATTACTACTACTCCTCCGACTACGATTCCTCATCCGAATGAATTCTCTCTCTGGTAATTTCTCCCTCTTTTCTTCAATTATGAGATTGCGCGATCCTAACTATTCACTCGTCAATTTCTGCTTCTGGATTCCTTTTTTTTTTTTCTTCTTTCTCGCAATTCGATTATGCGTGATTCGTCTTCATAACATCAGATTTGACATTTTCTGAGCATAATCATGTGTTCGCTGACATTTTTCTAGCTTGTTTTTGTCAAGAGTTCATTGAGTATGATAGTAATCGACAACGAGCTAGTAGTTAAGATAACACCATCGATCACTTGCATTGAAAGATTGCTTGCTAGTTTGTCAACTGAGGGATTTAAACCAACACCATCTTCTGTGTCTTCCTTAAGTAATGATTGTTTTATTTGATTTCGTTGGTTGAGGTATCTGCTCCGTGTTACATCTCATGCCTTTCAATTTGTTGTGTTCATTGAGGTTTTCCAGCTACCACTTAATTTTTAGTTGGAGAGGGGAACAAAATATTCTTGGTGTGAAAATCTCTCCCAAGTAAACGGTTTTAAAATCGTGAGGTTGGTGGCGATATGTAACGGACCAAAGCGGACAATATCTACTAGCGGTGGGCTTGGGCTTGGGCCGTTACATTATACCACCACTTGCCTTGTGATTCATCATAAATGTCACAGATATGCTTGATTTATTGGGTGGAGATTTGCTCAATAATGTTGTATCTGTTACTCTCTGGCTTGAATTTGATCCTCTTCAAGGGATTGAACAGTGGTCTGATCAATGGCTTCATCAATAAGTTTGTTGTTTTTATAGGCAAAGTGGTTGAAGTGGATGAGAGTAGGAATTTAGTCATAAGGAAAGCCTTCTTTTCATTTTCCCTATTATCTTGTCCCACCATTGTAGAATATGTTCCGTTAACATTTCACCTAAAAGCTTAAGTTGTTAGATCTCTGAAACACGGATGATTAATATGAAGAGAGGAAGGAAATAACTCTTGAGGGATTTGAACGTATGGTTTCATTTGACACTGTCACTCTTGATCTCAGTCCTAGAGAATTTCGTGGACACGAGGTGTGAGATCCCATATTGGTTGGAGAGGAGAACGAAGCATTCTTTATAAGGACATGGAAACCTCTCCTTAGTGGACGCGTTTTAAAACCTTGAGGGGAAGCTCGAAAGGAAAAGCCCAAAGAGGACAATATCTACTAGTGGTGGGCTTGGGCTGTTACACGAGGAATGAAATGGGGGCAGGGAAGCCATCCTTGGCCTTGTCCGTTCCCTTGTTTAGTGTGTTGTATACATATGCAATTTATAAATCTATTGTTTGGCTTGGGAACCTTACCAAATTAGGGCTTGTGACTTCTCCGTGTTCATCTAGGATCGTCATTTCTAATCTTAACACCTGAGACCTCTTAGTATCTGTAGGTTTTCTATAAATCTAATGAGAAGATGAATCCAAATTAATATGAATCAGATATTTCTGCAGTCGGAGTGGTACAAAGGATTAACTGTTCTCAGAATGTGGAAGTTTCAGGGTACTTGGTGCCTAATGAGACATTACATTTACTTGGAAAGACGAGGCTTCGGTTCAAGTAATGCAAGTATGAAATAGACCACTTGAACTTGGAAAATTATGGAAGAAAAATTTTGAGTTTGTTTAAAATGTATGTTCTCTTCGTCTCTGTCTTCTCGAACTAAATGCAACATTTGGGCATTATAGTAATGGGTATTACAAGGATGTGTTGGCTTTCTTTTAGAATGTTGGATAGAAAATAAACGTGGTGGTGACGTGGATCTACGTGGCAACTTGGGCACTTGTCTGGACGAACTTTTCGTTCAACATTCTAGTGGTTTTTCTATTCCAAGAGTAGTTTTGAAGCGCTAATGAATATTTTTTCGATCTCTTGCTGGCATCTTGTTCTGTTTTTATAACATTAAGTGTAACCTTTAATGCAATTTTATGGTGGTTTCCTTGTTTGATGAAGGGTGGACGCTTGGAGTTGCATTCCCATTCTAGCATCTGAACAGTTCTTAGCAAGCTTTGTGTGA

mRNA sequence

ATGCATCGCAATGCATTGCACGATCTCCCGATCGCCTCACCAGCCACCAACTTCTTTATGTTCTCTTCAGCTACCCTCTTCAACAGCTCTCTCGCCTCGCCCTCTCTATATGGACTTTCTTATGCGTTCCTCCACCGGGTTCCTTCTACTATTACTACTACTCCTCCGACTACGATTCCTCATCCGAATGAATTCTCTCTCTGGGTGGACGCTTGGAGTTGCATTCCCATTCTAGCATCTGAACAGTTCTTAGCAAGCTTTGTGTGA

Coding sequence (CDS)

ATGCATCGCAATGCATTGCACGATCTCCCGATCGCCTCACCAGCCACCAACTTCTTTATGTTCTCTTCAGCTACCCTCTTCAACAGCTCTCTCGCCTCGCCCTCTCTATATGGACTTTCTTATGCGTTCCTCCACCGGGTTCCTTCTACTATTACTACTACTCCTCCGACTACGATTCCTCATCCGAATGAATTCTCTCTCTGGGTGGACGCTTGGAGTTGCATTCCCATTCTAGCATCTGAACAGTTCTTAGCAAGCTTTGTGTGA

Protein sequence

MHRNALHDLPIASPATNFFMFSSATLFNSSLASPSLYGLSYAFLHRVPSTITTTPPTTIPHPNEFSLWVDAWSCIPILASEQFLASFV
Homology
[Close]
BLAST of Csor.00g223760 vs. NCBI nr
Match: KAG6605832.1 (hypothetical protein SDJN03_03149, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 182 bits (463), Expect = 4.42e-58
Identity = 88/88 (100.00%), Postives = 88/88 (100.00%), Query Frame = 0 

Query: 1  MHRNALHDLPIASPATNFFMFSSATLFNSSLASPSLYGLSYAFLHRVPSTITTTPPTTIP 60
          MHRNALHDLPIASPATNFFMFSSATLFNSSLASPSLYGLSYAFLHRVPSTITTTPPTTIP
Sbjct: 1  MHRNALHDLPIASPATNFFMFSSATLFNSSLASPSLYGLSYAFLHRVPSTITTTPPTTIP 60

Query: 61 HPNEFSLWVDAWSCIPILASEQFLASFV 88
          HPNEFSLWVDAWSCIPILASEQFLASFV
Sbjct: 61 HPNEFSLWVDAWSCIPILASEQFLASFV 88

The following BLAST results are available for this feature:
BLAST of Csor.00g223760 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g223760 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605832.14.42e-58100.00hypothetical protein SDJN03_03149, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g223760 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g223760 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g223760.m01Csor.00g223760.m01mRNA