Csor.00g223740 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGCATCATAAATAGGCTCTTCTTCCCCCTCTCAAAGCCCACACCCACGCCCACGCCCACTGTTCTTCTTCAATTCAACAGCAGCCCAAAGCCAGGAGGGAAAGGTCTGCAAATCTCACAACACATCATTCATTCAGCAATGGAAGCAATGAAGTTGAAGCTTTTCCTGGTGCTGCTGGTGTTGGTGGCCTTTGCCGGCACCATGGCCCAAGCTGCTGCTCCTTCTGAGGCTCCTGCTCCTGCTCCTGCCTCAGATGCTCCTCTTATTTACTCCTCCTTCTTTGCTTCTCTATCTGGACTTGTTTTTGCTTACTTCCTTTAA ATGTGCATCATAAATAGGCTCTTCTTCCCCCTCTCAAAGCCCACACCCACGCCCACGCCCACTGTTCTTCTTCAATTCAACAGCAGCCCAAAGCCAGGAGGGAAAGGTCTGCAAATCTCACAACACATCATTCATTCAGCAATGGAAGCAATGAAGTTGAAGCTTTTCCTGGTGCTGCTGGTGTTGGTGGCCTTTGCCGGCACCATGGCCCAAGCTGCTGCTCCTTCTGAGGCTCCTGCTCCTGCTCCTGCCTCAGATGCTCCTCTTATTTACTCCTCCTTCTTTGCTTCTCTATCTGGACTTGTTTTTGCTTACTTCCTTTAA ATGTGCATCATAAATAGGCTCTTCTTCCCCCTCTCAAAGCCCACACCCACGCCCACGCCCACTGTTCTTCTTCAATTCAACAGCAGCCCAAAGCCAGGAGGGAAAGGTCTGCAAATCTCACAACACATCATTCATTCAGCAATGGAAGCAATGAAGTTGAAGCTTTTCCTGGTGCTGCTGGTGTTGGTGGCCTTTGCCGGCACCATGGCCCAAGCTGCTGCTCCTTCTGAGGCTCCTGCTCCTGCTCCTGCCTCAGATGCTCCTCTTATTTACTCCTCCTTCTTTGCTTCTCTATCTGGACTTGTTTTTGCTTACTTCCTTTAA MCIINRLFFPLSKPTPTPTPTVLLQFNSSPKPGGKGLQISQHIIHSAMEAMKLKLFLVLLVLVAFAGTMAQAAAPSEAPAPAPASDAPLIYSSFFASLSGLVFAYFL Homology
BLAST of Csor.00g223740 vs. ExPASy Swiss-Prot
Match: Q9LVC0 (Arabinogalactan protein 14 OS=Arabidopsis thaliana OX=3702 GN=AGP14 PE=1 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 9.2e-05 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Csor.00g223740 vs. ExPASy Swiss-Prot
Match: Q9STQ3 (Arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=AGP13 PE=1 SV=1) HSP 1 Score: 47.0 bits (110), Expect = 1.6e-04 Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of Csor.00g223740 vs. NCBI nr
Match: KAG6605834.1 (Arabinogalactan protein 14, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 197 bits (502), Expect = 1.97e-63 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of Csor.00g223740 vs. NCBI nr
Match: XP_022944304.1 (arabinogalactan peptide 13-like [Cucurbita moschata] >XP_022985687.1 arabinogalactan peptide 13-like [Cucurbita maxima]) HSP 1 Score: 81.6 bits (200), Expect = 5.15e-18 Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of Csor.00g223740 vs. NCBI nr
Match: XP_038902540.1 (arabinogalactan protein 13-like [Benincasa hispida]) HSP 1 Score: 79.3 bits (194), Expect = 4.20e-17 Identity = 47/60 (78.33%), Postives = 54/60 (90.00%), Query Frame = 0
BLAST of Csor.00g223740 vs. NCBI nr
Match: KAG6570311.1 (hypothetical protein SDJN03_29226, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 79.7 bits (195), Expect = 2.50e-16 Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of Csor.00g223740 vs. NCBI nr
Match: XP_023513159.1 (arabinogalactan peptide 14-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 70.9 bits (172), Expect = 8.76e-14 Identity = 46/60 (76.67%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of Csor.00g223740 vs. ExPASy TrEMBL
Match: A0A6J1J5K6 (arabinogalactan peptide 13-like OS=Cucurbita maxima OX=3661 GN=LOC111483668 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.49e-18 Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of Csor.00g223740 vs. ExPASy TrEMBL
Match: A0A6J1FWG8 (arabinogalactan peptide 13-like OS=Cucurbita moschata OX=3662 GN=LOC111448787 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.49e-18 Identity = 49/60 (81.67%), Postives = 53/60 (88.33%), Query Frame = 0
BLAST of Csor.00g223740 vs. ExPASy TrEMBL
Match: A0A498IKT8 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_009264 PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.74e-06 Identity = 34/61 (55.74%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of Csor.00g223740 vs. ExPASy TrEMBL
Match: A0A438JV44 (Arabinogalactan peptide 14 OS=Vitis vinifera OX=29760 GN=AGP14_0 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.59e-06 Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of Csor.00g223740 vs. ExPASy TrEMBL
Match: F6GUN4 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g00440 PE=3 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 4.59e-06 Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = 0
BLAST of Csor.00g223740 vs. TAIR 10
Match: AT5G56540.1 (arabinogalactan protein 14 ) HSP 1 Score: 47.8 bits (112), Expect = 6.5e-06 Identity = 28/59 (47.46%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Csor.00g223740 vs. TAIR 10
Match: AT4G26320.1 (arabinogalactan protein 13 ) HSP 1 Score: 47.0 bits (110), Expect = 1.1e-05 Identity = 30/58 (51.72%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of Csor.00g223740 vs. TAIR 10
Match: AT3G13520.1 (arabinogalactan protein 12 ) HSP 1 Score: 43.1 bits (100), Expect = 1.6e-04 Identity = 24/58 (41.38%), Postives = 37/58 (63.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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