Csor.00g223350 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g223350
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
Location	Csor_Chr02: 7491729 .. 7492487 (-)
RNA-Seq Expression	Csor.00g223350
Synteny	Csor.00g223350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACGCTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGGTAATTGATTCGTCCGTGATTCATATGTCGTATCATTATTGATGTAATCTGTGTGACGTTAATTGTTGGAGTATGTGAACTACAGGGCTTCTCCATCTGCCGCCCAACTCCGCAGAAGCCAAGGATTTTTTGGGGCTAAGCGCCAAGGGAGCAAACGTTACATCGGCTCCCACGGGTAATGATACTTATTAATTTCTTTTAGAGTAAGAACAGTAATTAGAGGTATTTCTATTTGATCTTGACATTAATTAATCGTTAACGTACGCTAATTAGTCTAACAAAACATGTTTTAATTTGTTGCAGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAG

mRNA sequence

ATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACGCTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGGGCTTCTCCATCTGCCGCCCAACTCCGCAGAAGCCAAGGATTTTTTGGGGCTAAGCGCCAAGGGAGCAAACGTTACATCGGCTCCCACGGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAG

Coding sequence (CDS)

ATGACCTCCAAATCGCCTTCAACTAATTTGGCTATGTCATGCGCCCTGGCGCTGCTCTTCCTGGGCTTGGTGACCTCAAACGTAGACCAGGACAGAGCCGAGTGCACAGACCAAGTGGTCGGGCTAGCGACTTGCCTGCCGTACGTGGGCGGCGAGGCGAAAGCGCCTACACCCGACTGCTGCAGCGGCCTCAGGCTTGTGGTTCAAAAGAGCATGAAATGTCTCTGCGTGCTGATAAAGGACCGTAATGACCCCACCCTGGGCCTCAAAGTGAACCTTACGCTCGCTCTTGGACTACCTAATGTATGCCACACCCCGGCCAATATAACAGATTGTATCGGGCTTCTCCATCTGCCGCCCAACTCCGCAGAAGCCAAGGATTTTTTGGGGCTAAGCGCCAAGGGAGCAAACGTTACATCGGCTCCCACGGCGAGCAGTAATCCCACAGAAAAGCCTGACGTAAAAAATGACGGTGGAATGAGAAAACAACGGATGGGGGTCGAGATTTTCATTTCATGTATTGTTCTATTCACTTCTATTTGGTAG

Protein sequence

MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPPNSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSIW

Homology

[Close]

BLAST of Csor.00g223350 vs. ExPASy Swiss-Prot
Match: O64865 (Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3702 GN=LTPG14 PE=2 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.0e-40
Identity = 91/191 (47.64%), Postives = 124/191 (64.92%), Query Frame = 0


Query: 12  MSCALALLFLGLVTSNVD---QDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 71
           M+ A+AL+ + +V +  D   +D+ ECT+Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V+
Sbjct: 9   MATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVL 68

Query: 72  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPPNSAEAKDF 131
             + KCLCV+I+DRNDP LGL++N++LAL LP+VCH  A++T C  LLHL PNS +A+ F
Sbjct: 69  NSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVF 128

Query: 132 LGLSAKGANVT---SAPTASS------NPTEKPDVKNDGG-------------MRKQRMG 178
             L AKG N T   SAPT SS      +PT   D  N+ G               KQ +G
Sbjct: 129 YQL-AKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG 188

[Close]

BLAST of Csor.00g223350 vs. ExPASy Swiss-Prot
Match: O64864 (Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3702 GN=LTPG13 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.8e-38
Identity = 87/192 (45.31%), Postives = 120/192 (62.50%), Query Frame = 0


Query: 12  MSCALALLFLGLVT----SNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLV 71
           M+ A+AL+ + +V     ++  +D+ ECT Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V
Sbjct: 9   MATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQV 68

Query: 72  VQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPPNSAEAKD 131
           +   MKCLC++I++RNDP LGL+VN++LAL LP+VCH  A+IT C  LLHL PNS +A+ 
Sbjct: 69  INSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQV 128

Query: 132 FLGLSAKGANVT---SAPTASSN-------------------PTEKPDVKNDGGMRKQRM 178
           F  L AKG N T   SAPT S++                    T  P   +     KQ +
Sbjct: 129 FYQL-AKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWL 188

[Close]

BLAST of Csor.00g223350 vs. ExPASy Swiss-Prot
Match: F4I082 (Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=3702 GN=LTPG6 PE=2 SV=2)

HSP 1 Score: 156.4 bits (394), Expect = 3.1e-37
Identity = 80/172 (46.51%), Postives = 113/172 (65.70%), Query Frame = 0


Query: 10  LAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 69
           L ++  +  + LG   S++ QDR ECT+Q++ L+TC+PYVGG+AKAPT DCC+G   V++
Sbjct: 8   LFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCCAGFGQVIR 67

Query: 70  KSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCH-TPANITDCIGLLHLPPNSAEAKDF 129
           KS KC+C+L++D++DP LG+K+N TLA  LP+ CH T  NITDCI +LHLP NS  AK+F
Sbjct: 68  KSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPRNSTLAKEF 127

Query: 130 --LGLSAKGANVTSAPTASSNPT---EKPDVKNDGGMRKQRMGVEIFISCIV 176
             LG      N TS      + T   +   VK++G   K  +GVE+ I  +V
Sbjct: 128 ENLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLIYLLV 179

[Close]

BLAST of Csor.00g223350 vs. ExPASy Swiss-Prot
Match: Q9M2G1 (Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3702 GN=LTPG22 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 3.0e-24
Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 10  LAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 69
           LA+   +A++FLG V S + QD   C D +  L +CLP+V  +AKAP   CCS L++ + 
Sbjct: 14  LALCITVAVMFLG-VRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKID 73

Query: 70  K--SMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPPNSAEA-- 129
           K  + KCLC L+KDR+DP LG KV+   A+ LP+ CH PANI+ C  LLHL P+S  +  
Sbjct: 74  KGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQI 133

Query: 130 -KDFLGLSAKGANVTSAPTASS 147
            K F   S++     +  T+SS
Sbjct: 134 FKQFTESSSQTVGHKAVSTSSS 154

[Close]

BLAST of Csor.00g223350 vs. ExPASy Swiss-Prot
Match: Q9C9B1 (Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3702 GN=LTPG10 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 3.2e-10
Identity = 40/150 (26.67%), Postives = 68/150 (45.33%), Query Frame = 0


Query: 10  LAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 69
           + +  +L+  FL +V + V    A C  +++ LA C P+V G A+ P   CC  L  +  
Sbjct: 8   ITLLISLSAFFLRMVLAQVP---ATCASRLLSLAPCGPFVQGFAQLPAQPCCDSLNQIYS 67

Query: 70  KSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDC-----------IGLLHL 129
           +   CLC+ + + +  +    +N TLAL LP +C+ PAN + C              +  
Sbjct: 68  QEATCLCLFLNNTSTLSPAFPINQTLALQLPPLCNIPANSSTCSSSFPGEAPSDSSSVAP 127

Query: 130 PPNSAEAKDFLGLSAKGANVTSAPTASSNP 149
           PP+S+        +   + V + P A   P
Sbjct: 128 PPSSSTGSQISQGAKNNSRVAATPVAQMAP 154

[Close]

BLAST of Csor.00g223350 vs. NCBI nr
Match: XP_023534119.1 (protein YLS3-like [Cucurbita pepo subsp. pepo] >KAG6605872.1 Protein YLS3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035823.1 Protein YLS3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 371 bits (952), Expect = 1.18e-129
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60
           MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC
Sbjct: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60

Query: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120
           CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP
Sbjct: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120

Query: 121 NSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSI 180
           NSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSI
Sbjct: 121 NSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSI 180

[Close]

BLAST of Csor.00g223350 vs. NCBI nr
Match: XP_022958128.1 (protein YLS3-like [Cucurbita moschata])

HSP 1 Score: 362 bits (930), Expect = 2.66e-126
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60
           MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC
Sbjct: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60

Query: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120
           CSGLRLVVQKSMKCLCVLIKDRNDPTL LKVNLTLALGLPNVCHTPANITDCIGLLHLPP
Sbjct: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLALKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120

Query: 121 NSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSI 180
           NSAEAKDFLGLSAKGANVTSAP ASSNPTEKPDVKNDGGMRKQ +GVEIFISCIVLFTSI
Sbjct: 121 NSAEAKDFLGLSAKGANVTSAPAASSNPTEKPDVKNDGGMRKQWLGVEIFISCIVLFTSI 180

[Close]

BLAST of Csor.00g223350 vs. NCBI nr
Match: XP_022995769.1 (protein YLS3-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 361 bits (927), Expect = 7.64e-126
Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60
           MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC
Sbjct: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60

Query: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120
           CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPAN+TDCIGLLHLPP
Sbjct: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANVTDCIGLLHLPP 120

Query: 121 NSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSI 180
           NSAEAKDFLGLSAKGANVTSAP ASSNPT+KP+VKNDGGMRKQ +GVEIFISCIVLFTSI
Sbjct: 121 NSAEAKDFLGLSAKGANVTSAPAASSNPTQKPEVKNDGGMRKQWVGVEIFISCIVLFTSI 180

[Close]

BLAST of Csor.00g223350 vs. NCBI nr
Match: XP_022995770.1 (protein YLS3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 291 bits (745), Expect = 1.36e-98
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60
           MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC
Sbjct: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60

Query: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120
           CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPAN+TDCIGLLHLPP
Sbjct: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANVTDCIGLLHLPP 120

Query: 121 NSAEAKDFLGLSAKGANVTSAPTAS 145
           NSAEAKDFLGLSAKGANVTSAP  +
Sbjct: 121 NSAEAKDFLGLSAKGANVTSAPAGN 145

[Close]

BLAST of Csor.00g223350 vs. NCBI nr
Match: XP_022986687.1 (protein YLS3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 262 bits (669), Expect = 1.71e-86
Identity = 129/186 (69.35%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 1   MTSKSPSTNLA--MSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTP 60
           M SKS STN    +SCA+ALLF+G V+SNVDQDRAEC DQVVGLATCLPYVGGEA+APTP
Sbjct: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHL 120
           DCCSGL++V++KS KCLCVLIKDRNDP+LGLKVNLTLALGLPN CH PANI DCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 PPNSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCI---V 180
            PNS +AKDF+G  +KGAN T+AP A  N T+ P ++   GMR Q +G E+FI+ +   +
Sbjct: 121 SPNSQDAKDFMG--SKGANTTAAPAAPGNSTQTP-MEKGSGMRNQWLGAEMFIAFLTSSL 180

[Close]

BLAST of Csor.00g223350 vs. ExPASy TrEMBL
Match: A0A6J1H2A2 (protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111459449 PE=4 SV=1)

HSP 1 Score: 362 bits (930), Expect = 1.29e-126
Identity = 177/181 (97.79%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60
           MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC
Sbjct: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60

Query: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120
           CSGLRLVVQKSMKCLCVLIKDRNDPTL LKVNLTLALGLPNVCHTPANITDCIGLLHLPP
Sbjct: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLALKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120

Query: 121 NSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSI 180
           NSAEAKDFLGLSAKGANVTSAP ASSNPTEKPDVKNDGGMRKQ +GVEIFISCIVLFTSI
Sbjct: 121 NSAEAKDFLGLSAKGANVTSAPAASSNPTEKPDVKNDGGMRKQWLGVEIFISCIVLFTSI 180

[Close]

BLAST of Csor.00g223350 vs. ExPASy TrEMBL
Match: A0A6J1K6V2 (protein YLS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491205 PE=4 SV=1)

HSP 1 Score: 361 bits (927), Expect = 3.70e-126
Identity = 175/181 (96.69%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60
           MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC
Sbjct: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60

Query: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120
           CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPAN+TDCIGLLHLPP
Sbjct: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANVTDCIGLLHLPP 120

Query: 121 NSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIVLFTSI 180
           NSAEAKDFLGLSAKGANVTSAP ASSNPT+KP+VKNDGGMRKQ +GVEIFISCIVLFTSI
Sbjct: 121 NSAEAKDFLGLSAKGANVTSAPAASSNPTQKPEVKNDGGMRKQWVGVEIFISCIVLFTSI 180

[Close]

BLAST of Csor.00g223350 vs. ExPASy TrEMBL
Match: A0A6J1K4W0 (protein YLS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491205 PE=4 SV=1)

HSP 1 Score: 291 bits (745), Expect = 6.59e-99
Identity = 141/145 (97.24%), Postives = 143/145 (98.62%), Query Frame = 0


Query: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60
           MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC
Sbjct: 1   MTSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDC 60

Query: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPP 120
           CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPAN+TDCIGLLHLPP
Sbjct: 61  CSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANVTDCIGLLHLPP 120

Query: 121 NSAEAKDFLGLSAKGANVTSAPTAS 145
           NSAEAKDFLGLSAKGANVTSAP  +
Sbjct: 121 NSAEAKDFLGLSAKGANVTSAPAGN 145

[Close]

BLAST of Csor.00g223350 vs. ExPASy TrEMBL
Match: A0A6J1J894 (protein YLS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484364 PE=4 SV=1)

HSP 1 Score: 262 bits (669), Expect = 8.27e-87
Identity = 129/186 (69.35%), Postives = 152/186 (81.72%), Query Frame = 0


Query: 1   MTSKSPSTNLA--MSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTP 60
           M SKS STN    +SCA+ALLF+G V+SNVDQDRAEC DQVVGLATCLPYVGGEA+APTP
Sbjct: 1   MASKSSSTNYTALISCAIALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHL 120
           DCCSGL++V++KS KCLCVLIKDRNDP+LGLKVNLTLALGLPN CH PANI DCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 PPNSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCI---V 180
            PNS +AKDF+G  +KGAN T+AP A  N T+ P ++   GMR Q +G E+FI+ +   +
Sbjct: 121 SPNSQDAKDFMG--SKGANTTAAPAAPGNSTQTP-MEKGSGMRNQWLGAEMFIAFLTSSL 180

[Close]

BLAST of Csor.00g223350 vs. ExPASy TrEMBL
Match: A0A6J1FYE4 (protein YLS3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448546 PE=4 SV=1)

HSP 1 Score: 258 bits (660), Expect = 1.94e-85
Identity = 129/186 (69.35%), Postives = 149/186 (80.11%), Query Frame = 0


Query: 1   MTSKSPSTNLA--MSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTP 60
           M SKS STN    + CA+ALLF+G V+SNVDQDRAEC DQVVGLATCLPYVGGEA+APTP
Sbjct: 1   MASKSSSTNYTALIPCAMALLFVGFVSSNVDQDRAECADQVVGLATCLPYVGGEARAPTP 60

Query: 61  DCCSGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHL 120
           DCCSGL++V++KS KCLCVLIKDRNDP+LGLKVNLTLALGLPN CH PANI DCIGLLHL
Sbjct: 61  DCCSGLKVVLEKSKKCLCVLIKDRNDPSLGLKVNLTLALGLPNACHAPANIQDCIGLLHL 120

Query: 121 PPNSAEAKDFLGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCI---V 180
            PNS +AKDF+G  +KGAN T+AP A  N T+ P ++   GMR Q   VE+FI  +   +
Sbjct: 121 SPNSQDAKDFMG--SKGANTTAAPAAPGNSTQSP-MEKGSGMRNQWSSVEMFIGFLTSSL 180

[Close]

BLAST of Csor.00g223350 vs. TAIR 10
Match: AT2G44300.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 166.4 bits (420), Expect = 2.1e-41
Identity = 91/191 (47.64%), Postives = 124/191 (64.92%), Query Frame = 0


Query: 12  MSCALALLFLGLVTSNVD---QDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVV 71
           M+ A+AL+ + +V +  D   +D+ ECT+Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V+
Sbjct: 9   MATAIALIVVAMVVAAADDKTKDKEECTEQLVGMATCLPYVQGQAKSPTPDCCSGLKQVL 68

Query: 72  QKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPPNSAEAKDF 131
             + KCLCV+I+DRNDP LGL++N++LAL LP+VCH  A++T C  LLHL PNS +A+ F
Sbjct: 69  NSNKKCLCVIIQDRNDPDLGLQINVSLALALPSVCHAAADVTKCPALLHLDPNSPDAQVF 128

Query: 132 LGLSAKGANVT---SAPTASS------NPTEKPDVKNDGG-------------MRKQRMG 178
             L AKG N T   SAPT SS      +PT   D  N+ G               KQ +G
Sbjct: 129 YQL-AKGLNKTGPASAPTGSSPGPISISPTSGSDDGNNSGRTTSVPGRNHAQSFYKQWLG 188

[Close]

BLAST of Csor.00g223350 vs. TAIR 10
Match: AT1G55260.2 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 1.5e-39
Identity = 80/177 (45.20%), Postives = 114/177 (64.41%), Query Frame = 0


Query: 2   TSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCC 61
           T +  +  L ++  +  + LG   S++ QDR ECT+Q++ L+TC+PYVGG+AKAPT DCC
Sbjct: 43  TMEKSTRTLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCC 102

Query: 62  SGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCH-TPANITDCIGLLHLPP 121
           +G   V++KS KC+C+L++D++DP LG+K+N TLA  LP+ CH T  NITDCI +LHLP 
Sbjct: 103 AGFGQVIRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPR 162

Query: 122 NSAEAKDF--LGLSAKGANVTSAPTASSNPTEKPDVKNDGGMRKQRMGVEIFISCIV 176
           NS  AK+F  LG      N TS         +   VK++G   K  +GVE+ I  +V
Sbjct: 163 NSTLAKEFENLGRIEDNYNSTSPTQIHKGGGKAEPVKSNGWKEKSWLGVELLIYLLV 219

[Close]

BLAST of Csor.00g223350 vs. TAIR 10
Match: AT2G44290.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 159.1 bits (401), Expect = 3.4e-39
Identity = 87/192 (45.31%), Postives = 120/192 (62.50%), Query Frame = 0


Query: 12  MSCALALLFLGLVT----SNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLV 71
           M+ A+AL+ + +V     ++  +D+ ECT Q+VG+ATCLPYV G+AK+PTPDCCSGL+ V
Sbjct: 9   MATAIALIMVAMVVDAAGADKGKDKEECTAQLVGMATCLPYVQGKAKSPTPDCCSGLKQV 68

Query: 72  VQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPPNSAEAKD 131
           +   MKCLC++I++RNDP LGL+VN++LAL LP+VCH  A+IT C  LLHL PNS +A+ 
Sbjct: 69  INSDMKCLCMIIQERNDPDLGLQVNVSLALALPSVCHATADITKCPALLHLDPNSPDAQV 128

Query: 132 FLGLSAKGANVT---SAPTASSN-------------------PTEKPDVKNDGGMRKQRM 178
           F  L AKG N T   SAPT S++                    T  P   +     KQ +
Sbjct: 129 FYQL-AKGLNETVSASAPTGSASEPTSMSSTPGSSAGNNSGRTTSVPGTNHAQSFSKQWL 188

[Close]

BLAST of Csor.00g223350 vs. TAIR 10
Match: AT1G55260.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 157.9 bits (398), Expect = 7.6e-39
Identity = 81/180 (45.00%), Postives = 116/180 (64.44%), Query Frame = 0


Query: 2   TSKSPSTNLAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCC 61
           T +  +  L ++  +  + LG   S++ QDR ECT+Q++ L+TC+PYVGG+AKAPT DCC
Sbjct: 43  TMEKSTRTLFITIVITSMLLGFGNSDLAQDREECTNQLIELSTCIPYVGGDAKAPTKDCC 102

Query: 62  SGLRLVVQKSMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCH-TPANITDCIGLLHLPP 121
           +G   V++KS KC+C+L++D++DP LG+K+N TLA  LP+ CH T  NITDCI +LHLP 
Sbjct: 103 AGFGQVIRKSEKCVCILVRDKDDPQLGIKINATLAAHLPSACHITAPNITDCISILHLPR 162

Query: 122 NSAEAKDF--LGLSAKGANVTSAPTASSNPT---EKPDVKNDGGMRKQRMGVEIFISCIV 176
           NS  AK+F  LG      N TS      + T   +   VK++G   K  +GVE+ I  +V
Sbjct: 163 NSTLAKEFENLGRIEDNYNSTSPTQIHKDGTGGGKAEPVKSNGWKEKSWLGVELLIYLLV 222

[Close]

BLAST of Csor.00g223350 vs. TAIR 10
Match: AT3G58550.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 62/142 (43.66%), Postives = 87/142 (61.27%), Query Frame = 0


Query: 10  LAMSCALALLFLGLVTSNVDQDRAECTDQVVGLATCLPYVGGEAKAPTPDCCSGLRLVVQ 69
           LA+   +A++FLG V S + QD   C D +  L +CLP+V  +AKAP   CCS L++ + 
Sbjct: 14  LALCITVAVMFLG-VRSELSQDIKGCQDAMSDLYSCLPFVTNKAKAPDSTCCSTLKVKID 73

Query: 70  K--SMKCLCVLIKDRNDPTLGLKVNLTLALGLPNVCHTPANITDCIGLLHLPPNSAEA-- 129
           K  + KCLC L+KDR+DP LG KV+   A+ LP+ CH PANI+ C  LLHL P+S  +  
Sbjct: 74  KGQTRKCLCTLVKDRDDPGLGFKVDANRAMSLPSACHVPANISQCPDLLHLLPDSPASQI 133

Query: 130 -KDFLGLSAKGANVTSAPTASS 147
            K F   S++     +  T+SS
Sbjct: 134 FKQFTESSSQTVGHKAVSTSSS 154

The following BLAST results are available for this feature:

BLAST of Csor.00g223350 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64865	3.0e-40	47.64	Non-specific lipid transfer protein GPI-anchored 14 OS=Arabidopsis thaliana OX=3...	[more]
O64864	4.8e-38	45.31	Non-specific lipid transfer protein GPI-anchored 13 OS=Arabidopsis thaliana OX=3...	[more]
F4I082	3.1e-37	46.51	Non-specific lipid transfer protein GPI-anchored 6 OS=Arabidopsis thaliana OX=37...	[more]
Q9M2G1	3.0e-24	43.66	Non-specific lipid transfer protein GPI-anchored 22 OS=Arabidopsis thaliana OX=3...	[more]
Q9C9B1	3.2e-10	26.67	Non-specific lipid transfer protein GPI-anchored 10 OS=Arabidopsis thaliana OX=3...	[more]

BLAST of Csor.00g223350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534119.1	1.18e-129	100.00	protein YLS3-like [Cucurbita pepo subsp. pepo] >KAG6605872.1 Protein YLS3, parti...	[more]
XP_022958128.1	2.66e-126	97.79	protein YLS3-like [Cucurbita moschata]	[more]
XP_022995769.1	7.64e-126	96.69	protein YLS3-like isoform X1 [Cucurbita maxima]	[more]
XP_022995770.1	1.36e-98	97.24	protein YLS3-like isoform X2 [Cucurbita maxima]	[more]
XP_022986687.1	1.71e-86	69.35	protein YLS3-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Csor.00g223350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1H2A2	1.29e-126	97.79	protein YLS3-like OS=Cucurbita moschata OX=3662 GN=LOC111459449 PE=4 SV=1	[more]
A0A6J1K6V2	3.70e-126	96.69	protein YLS3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111491205 PE=4 SV...	[more]
A0A6J1K4W0	6.59e-99	97.24	protein YLS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111491205 PE=4 SV...	[more]
A0A6J1J894	8.27e-87	69.35	protein YLS3-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484364 PE=4 SV...	[more]
A0A6J1FYE4	1.94e-85	69.35	protein YLS3-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448546 PE=4 ...	[more]

BLAST of Csor.00g223350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44300.1	2.1e-41	47.64	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.2	1.5e-39	45.20	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G44290.1	3.4e-39	45.31	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT1G55260.1	7.6e-39	45.00	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT3G58550.1	2.1e-25	43.66	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 35..112 e-value: 3.8E-5 score: 33.1
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF14368	LTP_2	coord: 24..112 e-value: 1.7E-12 score: 47.3
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 32..110 e-value: 6.5E-14 score: 53.6
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 34..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..152
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..159
None	No IPR available	PANTHER	PTHR33044:SF194	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN	coord: 10..175
None	No IPR available	CDD	cd00010	AAI_LTSS	coord: 42..104 e-value: 7.74211E-17 score: 68.9926
IPR043325	Alpha-Amylase Inhibitors (AAI), Lipid Transfer (LT) and Seed Storage (SS) Protein	PANTHER	PTHR33044	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 10..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g223350.m01	Csor.00g223350.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031225	anchored component of membrane
cellular_component	GO:0005886	plasma membrane