Csor.00g223320 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCATAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGGTTCTCTCCCTTTCTCCCAGATTAATTCTTACTACTAATTCTTTCATTCTGGTTTGTTCTTGAATTTTGTTGTGTGAATGTGCACGAATTGAAGATTGTTCCTGTTTCTTTTGCCGCCTCTATTGTCTTTTGTTGTAGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATAA ATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCATAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATAA ATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCATAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATAA MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG Homology
BLAST of Csor.00g223320 vs. NCBI nr
Match: KAG6605875.1 (hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150 bits (380), Expect = 7.55e-46 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Csor.00g223320 vs. NCBI nr
Match: KAG7035826.1 (hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 147 bits (372), Expect = 1.26e-44 Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0
BLAST of Csor.00g223320 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima]) HSP 1 Score: 138 bits (347), Expect = 1.10e-40 Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = 0
BLAST of Csor.00g223320 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_017904 [Cucumis sativus]) HSP 1 Score: 119 bits (299), Expect = 1.60e-33 Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Csor.00g223320 vs. NCBI nr
Match: XP_030954067.1 (uncharacterized protein LOC115976712 [Quercus lobata] >KAF3965766.1 hypothetical protein CMV_010076 [Castanea mollissima]) HSP 1 Score: 76.3 bits (186), Expect = 2.72e-16 Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: A0A6J1K4U9 (uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196 PE=4 SV=1) HSP 1 Score: 138 bits (347), Expect = 5.31e-41 Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = 0
BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: A0A0A0KWV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1) HSP 1 Score: 119 bits (299), Expect = 7.74e-34 Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0
BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: A0A1U7ZV42 (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.40e-16 Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0
BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: B9T068 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0768740 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 5.08e-16 Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: W9QLE6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.03e-15 Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0
BLAST of Csor.00g223320 vs. TAIR 10
Match: AT2G20480.1 (unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 65.1 bits (157), Expect = 2.7e-11 Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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