Csor.00g223320 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g223320
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 7502584 .. 7502946 (+)
RNA-Seq ExpressionCsor.00g223320
SyntenyCsor.00g223320
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCATAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGGTTCTCTCCCTTTCTCCCAGATTAATTCTTACTACTAATTCTTTCATTCTGGTTTGTTCTTGAATTTTGTTGTGTGAATGTGCACGAATTGAAGATTGTTCCTGTTTCTTTTGCCGCCTCTATTGTCTTTTGTTGTAGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATAA

mRNA sequence

ATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCATAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATAA

Coding sequence (CDS)

ATGAGAGCTTCAGAGCTTTCAACTCCAACCAATCCGACGACTACTGTAGAATGCAAGGACAGGCCCCATAAACCGCCGTTCAGGCCTGCTAAAGATGATACCAAACTTGTTCTCCAAGATCCGATACGGAGGTCAGATCCAATTGAGACAGAGGAAGCCGTGCTCCGACCACCTCCCTTCCAATTCTCTGTTTCGGAATCAAAGAACTCTTCTAAAATGGGATAA

Protein sequence

MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPFQFSVSESKNSSKMG
Homology
BLAST of Csor.00g223320 vs. NCBI nr
Match: KAG6605875.1 (hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 150 bits (380), Expect = 7.55e-46
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF
Sbjct: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60

Query: 61 QFSVSESKNSSKMG 74
          QFSVSESKNSSKMG
Sbjct: 61 QFSVSESKNSSKMG 74

BLAST of Csor.00g223320 vs. NCBI nr
Match: KAG7035826.1 (hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 147 bits (372), Expect = 1.26e-44
Identity = 73/74 (98.65%), Postives = 73/74 (98.65%), Query Frame = 0

Query: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          MRASELSTPTNPTTTVECKDRP KPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF
Sbjct: 1  MRASELSTPTNPTTTVECKDRPRKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60

Query: 61 QFSVSESKNSSKMG 74
          QFSVSESKNSSKMG
Sbjct: 61 QFSVSESKNSSKMG 74

BLAST of Csor.00g223320 vs. NCBI nr
Match: XP_022995760.1 (uncharacterized protein LOC111491196 [Cucurbita maxima])

HSP 1 Score: 138 bits (347), Expect = 1.10e-40
Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = 0

Query: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          MR SELSTPTNPT   ECKDRP KPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF
Sbjct: 11 MRTSELSTPTNPTNAAECKDRPLKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 70

Query: 61 QFSVSESKNSSKMG 74
          QFSVS+SKNSSKMG
Sbjct: 71 QFSVSKSKNSSKMG 84

BLAST of Csor.00g223320 vs. NCBI nr
Match: KGN54090.1 (hypothetical protein Csa_017904 [Cucumis sativus])

HSP 1 Score: 119 bits (299), Expect = 1.60e-33
Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          M+ASELS+P+N   TVECK+RP KPPFRPAKDDTKL+LQDPIRRSDPIETEEAVLRPPPF
Sbjct: 1  MKASELSSPSN---TVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPF 60

Query: 61 QFSVSESKNSSKMG 74
           FS+ +SKN S+MG
Sbjct: 61 HFSLPKSKNPSQMG 71

BLAST of Csor.00g223320 vs. NCBI nr
Match: XP_030954067.1 (uncharacterized protein LOC115976712 [Quercus lobata] >KAF3965766.1 hypothetical protein CMV_010076 [Castanea mollissima])

HSP 1 Score: 76.3 bits (186), Expect = 2.72e-16
Identity = 43/72 (59.72%), Postives = 50/72 (69.44%), Query Frame = 0

Query: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          M+ SE+S  +N        ++P KP FRPA+DDTK VLQDPI RSDPIETEEAVLR PPF
Sbjct: 1  MKVSEISMKSNNNNGQSSSEKPSKPHFRPAQDDTKPVLQDPILRSDPIETEEAVLRLPPF 60

Query: 61 QFSVSESKNSSK 72
            + S S  SSK
Sbjct: 61 PVT-SRSNPSSK 71

BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: A0A6J1K4U9 (uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196 PE=4 SV=1)

HSP 1 Score: 138 bits (347), Expect = 5.31e-41
Identity = 68/74 (91.89%), Postives = 69/74 (93.24%), Query Frame = 0

Query: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          MR SELSTPTNPT   ECKDRP KPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF
Sbjct: 11 MRTSELSTPTNPTNAAECKDRPLKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 70

Query: 61 QFSVSESKNSSKMG 74
          QFSVS+SKNSSKMG
Sbjct: 71 QFSVSKSKNSSKMG 84

BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: A0A0A0KWV8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1)

HSP 1 Score: 119 bits (299), Expect = 7.74e-34
Identity = 59/74 (79.73%), Postives = 67/74 (90.54%), Query Frame = 0

Query: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          M+ASELS+P+N   TVECK+RP KPPFRPAKDDTKL+LQDPIRRSDPIETEEAVLRPPPF
Sbjct: 1  MKASELSSPSN---TVECKERPQKPPFRPAKDDTKLLLQDPIRRSDPIETEEAVLRPPPF 60

Query: 61 QFSVSESKNSSKMG 74
           FS+ +SKN S+MG
Sbjct: 61 HFSLPKSKNPSQMG 71

BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: A0A1U7ZV42 (uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.40e-16
Identity = 40/62 (64.52%), Postives = 46/62 (74.19%), Query Frame = 0

Query: 1  MRASELSTPTNPTT--TVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPP 60
          M+ SE+   T+ +   T    D+P KPPFRPAKDDTK +LQDPI RSDPIETEEAVLR P
Sbjct: 1  MKGSEILIKTSESEGETKSFSDKPQKPPFRPAKDDTKPILQDPILRSDPIETEEAVLRLP 60

BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: B9T068 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0768740 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 5.08e-16
Identity = 38/60 (63.33%), Postives = 46/60 (76.67%), Query Frame = 0

Query: 1  MRASELSTPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 60
          M+  E+S+PT  +T     ++PHKP FRPA+DDTK  LQDPI RSDPIETEEA+LR PPF
Sbjct: 1  MKGKEISSPTIKSTNNNVINKPHKPFFRPAQDDTKPPLQDPILRSDPIETEEAMLRLPPF 60

BLAST of Csor.00g223320 vs. ExPASy TrEMBL
Match: W9QLE6 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 1.03e-15
Identity = 42/71 (59.15%), Postives = 52/71 (73.24%), Query Frame = 0

Query: 1  MRASELST-PTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPP 60
          M+ASE S  P+N     + +++P KP FRPAKDDTK +LQDPI RSDPIETEEAVLR PP
Sbjct: 1  MKASESSVKPSN--NYPQNREKPTKPSFRPAKDDTKPILQDPILRSDPIETEEAVLRLPP 60

Query: 61 FQFSVSESKNS 70
          F F+ + +  S
Sbjct: 61 FPFARTTNPKS 69

BLAST of Csor.00g223320 vs. TAIR 10
Match: AT2G20480.1 (unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 65.1 bits (157), Expect = 2.7e-11
Identity = 36/53 (67.92%), Postives = 38/53 (71.70%), Query Frame = 0

Query: 8  TPTNPTTTVECKDRPHKPPFRPAKDDTKLVLQDPIRRSDPIETEEAVLRPPPF 61
          TP  P  TV    +  KPPFRPA DDTK VLQDPI RSDP+ETEEAVLR P F
Sbjct: 7  TPARPNATV----KTQKPPFRPAVDDTKPVLQDPILRSDPMETEEAVLRLPSF 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6605875.17.55e-46100.00hypothetical protein SDJN03_03192, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035826.11.26e-4498.65hypothetical protein SDJN02_02625 [Cucurbita argyrosperma subsp. argyrosperma][more]
XP_022995760.11.10e-4091.89uncharacterized protein LOC111491196 [Cucurbita maxima][more]
KGN54090.11.60e-3379.73hypothetical protein Csa_017904 [Cucumis sativus][more]
XP_030954067.12.72e-1659.72uncharacterized protein LOC115976712 [Quercus lobata] >KAF3965766.1 hypothetical... [more]
Match NameE-valueIdentityDescription
A0A6J1K4U95.31e-4191.89uncharacterized protein LOC111491196 OS=Cucurbita maxima OX=3661 GN=LOC111491196... [more]
A0A0A0KWV87.74e-3479.73Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G280670 PE=4 SV=1[more]
A0A1U7ZV423.40e-1664.52uncharacterized protein LOC104597593 OS=Nelumbo nucifera OX=4432 GN=LOC104597593... [more]
B9T0685.08e-1663.33Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0768740 PE=4 SV=1[more]
W9QLE61.03e-1559.15Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_013727 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G20480.12.7e-1167.92unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bac... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..74
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 17..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availablePANTHERPTHR37207:SF2BNAA09G43730D PROTEINcoord: 3..62
NoneNo IPR availablePANTHERPTHR37207OS09G0446000 PROTEINcoord: 3..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g223320.m01Csor.00g223320.m01mRNA