Csor.00g222400 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g222400
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 8035392 .. 8035814 (+)
RNA-Seq ExpressionCsor.00g222400
SyntenyCsor.00g222400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACAACTCTCTTAAAATTCATGCCTATATTTGTTCCACAAGTTCGAATGCTACAGATTTGCTCTTAAAATTTACACTATCAAAGGACGGCCCGTGTGAGATTTTGGAGTATTTGATGTCTTTCAACCATACAAATGTCTCATATCTGATTCCTGCTGTATCTTTCAAGTAAGGGGTCTCGTTTTTAGCGTCGTCTTTGAACTATTTGAACTATATTCGAGCCTTTTGTAAACTAAAATATTAATATCGATCAATACGTTCGGAGAAAATTTCTGTCACCCATTTCATTATTCTTCTCCACAAAAATTTTCACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTAGGGATCGGGCAGGGGGTTCCCACGGGGAATGTAGGGGGCTCGTGTCGGGATTAAAAGAAAAATAA

mRNA sequence

ATGGACAACTCTCTTAAAATTCATGCCTATATTTGTTCCACAAGTTCGAATGCTACAGATTTGCTCTTAAAATTTACACTATCAAAGGACGGCCCGTGTGAGATTTTGGAGTATTTGATGTCTTTCAACCATACAAATGTCTCATATCTGATTCCTGCTGTATCTTTCAAGGATCGGGCAGGGGGTTCCCACGGGGAATGTAGGGGGCTCGTGTCGGGATTAAAAGAAAAATAA

Coding sequence (CDS)

ATGGACAACTCTCTTAAAATTCATGCCTATATTTGTTCCACAAGTTCGAATGCTACAGATTTGCTCTTAAAATTTACACTATCAAAGGACGGCCCGTGTGAGATTTTGGAGTATTTGATGTCTTTCAACCATACAAATGTCTCATATCTGATTCCTGCTGTATCTTTCAAGGATCGGGCAGGGGGTTCCCACGGGGAATGTAGGGGGCTCGTGTCGGGATTAAAAGAAAAATAA

Protein sequence

MDNSLKIHAYICSTSSNATDLLLKFTLSKDGPCEILEYLMSFNHTNVSYLIPAVSFKDRAGGSHGECRGLVSGLKEK
Homology
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BLAST of Csor.00g222400 vs. NCBI nr
Match: KAG6605967.1 (hypothetical protein SDJN03_03284, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 160 bits (404), Expect = 2.03e-49
Identity = 77/77 (100.00%), Postives = 77/77 (100.00%), Query Frame = 0 

Query: 1  MDNSLKIHAYICSTSSNATDLLLKFTLSKDGPCEILEYLMSFNHTNVSYLIPAVSFKDRA 60
          MDNSLKIHAYICSTSSNATDLLLKFTLSKDGPCEILEYLMSFNHTNVSYLIPAVSFKDRA
Sbjct: 1  MDNSLKIHAYICSTSSNATDLLLKFTLSKDGPCEILEYLMSFNHTNVSYLIPAVSFKDRA 60

Query: 61 GGSHGECRGLVSGLKEK 77
          GGSHGECRGLVSGLKEK
Sbjct: 61 GGSHGECRGLVSGLKEK 77

The following BLAST results are available for this feature:
BLAST of Csor.00g222400 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g222400 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6605967.12.03e-49100.00hypothetical protein SDJN03_03284, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g222400 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g222400 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g222400.m01Csor.00g222400.m01mRNA