Csor.00g222000 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g222000
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 8213538 .. 8214973 (+)
RNA-Seq ExpressionCsor.00g222000
SyntenyCsor.00g222000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTCAAGTGATTCCAGAAGTTGACATGGCGATGAATGTAAGTTTTTTGTTCATACCTTTTTGGAAGCAGTACTGGATATCATCAATTCCCAAGCCTGTAAACAAGGAGTGTTAGATTATTAATAGCTATAGCTGTGCTCTGTTATATGTTAATTTACCTCTGAAAATTGTTGCCGTTGAGGTTCCGAAATACACAATTCTTCGCGGGAGATCCCATATCCATTCCCTAAAAACGCTAATGGGGTTTTTACTTGATTCGTCATCGGCAAAAACCTGCATTCGAATTGCGTATGATTCATAGTAATACTGTGGCTCATGGAAGAATTCCAACGTGAAGTTTTTGACTAACCTCGTTGACTTGAAAATATGTCCCGTTTAATGGGAATTTGCCTCTCATGGCTGTTCTACAGGGTATCTGGAACAATATTGGTTCATATATTGGCGGATTTACGAAGTAGTCAATTAATAACATCTTGGAAGTTTGCTTTATTACTTACCAAAATCGTTCCGTGAACTGTTCCACTGTTTTGTTTCCTGTGAATGTTGCAGGATGAACATGATCCTTCACTGCAAAGCTCTCCCGTTTCCTGGTACGTGCATTTTGTATTGGGTGGCTCAGATGAATCTATAGTTTCACCTGAAAACATCAATTATACATTGAGCACTGGATGTTTCTGATCATTATATTGGTTTATTGAGATTTGAACGTTTACAGAATTTTCGAAGCAGTACCTGGTGACCATATGCACAAAAGGTACGGGCAAGCATCATTTAGCTCTCGTGGTTCTAGCTGTAGACAGACAGATAGAAACGAACTATTACGCGACTATAAATGATTGATTTTCCGGCCAGGTTACTCGGAAATGTTTTTACCTCATATAGGAGAGGATGTGTATCTGGAAGTTCATAGCTGCATCATGTCAGTTGCAATTAGTTTCTTTTCTAATATGTGTTTTAGAGAATACTCATTTCTATAATAGCTAAAACTCAATGCTTAAACGCCATACTTACGCTTGATGTTCTGTCCTGAGACGATCTACATGCTTCAGTTTGCGCATTGGGATGGAAGCAACACTGTTGTTCAAAGGAATCAAAGCTCCAGTGATGTTATTGTCCATGCAGTTCTGTGAAGTTGTAACTCGTCCGGAGTCAAGTCTGATTACTGGAACATCATCAGAATCATACTCATATAAATCTTCAATGTCTGTCGATTGTGATTCATCATATGCATGTTCAGGTGATTGAGGCACTTCAATGATAGGTTCACAATTGATGGTTTCATATCTCGATTCTGAAGATGGATTGCCTTCGATGTGGAGTACTGGTGCTGGATTCATCTCTTGAGCAGTGCCTTCATACCTTTTTTCCGGGATCATTGTACTTACCATTCTTTTCTCTGGCAATCCAGGTAATGCGAGCCTTGCACTGTTTTGA

mRNA sequence

ATGTTTCAAGTGATTCCAGAAGTTGACATGGCGATGAATGATGAACATGATCCTTCACTGCAAAGCTCTCCCGTTTCCTGGTACGTGCATTTTGTATTGGATTTGAACGTTTACAGAATTTTCGAAGCAGTACCTGGTGACCATATGCACAAAAGTTTGCGCATTGGGATGGAAGCAACACTGTTGTTCAAAGGAATCAAAGCTCCAGTGATGTTATTGTCCATGCAGTTCTGTGAAGTTGTAACTCGTCCGGAGTCAAGTTCACAATTGATGGTTTCATATCTCGATTCTGAAGATGGATTGCCTTCGATGTGGAGTACTGGTAATGCGAGCCTTGCACTGTTTTGA

Coding sequence (CDS)

ATGTTTCAAGTGATTCCAGAAGTTGACATGGCGATGAATGATGAACATGATCCTTCACTGCAAAGCTCTCCCGTTTCCTGGTACGTGCATTTTGTATTGGATTTGAACGTTTACAGAATTTTCGAAGCAGTACCTGGTGACCATATGCACAAAAGTTTGCGCATTGGGATGGAAGCAACACTGTTGTTCAAAGGAATCAAAGCTCCAGTGATGTTATTGTCCATGCAGTTCTGTGAAGTTGTAACTCGTCCGGAGTCAAGTTCACAATTGATGGTTTCATATCTCGATTCTGAAGATGGATTGCCTTCGATGTGGAGTACTGGTAATGCGAGCCTTGCACTGTTTTGA

Protein sequence

MFQVIPEVDMAMNDEHDPSLQSSPVSWYVHFVLDLNVYRIFEAVPGDHMHKSLRIGMEATLLFKGIKAPVMLLSMQFCEVVTRPESSSQLMVSYLDSEDGLPSMWSTGNASLALF
Homology
[Close]
BLAST of Csor.00g222000 vs. NCBI nr
Match: KAG6606007.1 (hypothetical protein SDJN03_03324, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 233 bits (595), Expect = 2.31e-77
Identity = 115/115 (100.00%), Postives = 115/115 (100.00%), Query Frame = 0 

Query: 1   MFQVIPEVDMAMNDEHDPSLQSSPVSWYVHFVLDLNVYRIFEAVPGDHMHKSLRIGMEAT 60
           MFQVIPEVDMAMNDEHDPSLQSSPVSWYVHFVLDLNVYRIFEAVPGDHMHKSLRIGMEAT
Sbjct: 1   MFQVIPEVDMAMNDEHDPSLQSSPVSWYVHFVLDLNVYRIFEAVPGDHMHKSLRIGMEAT 60

Query: 61  LLFKGIKAPVMLLSMQFCEVVTRPESSSQLMVSYLDSEDGLPSMWSTGNASLALF 115
           LLFKGIKAPVMLLSMQFCEVVTRPESSSQLMVSYLDSEDGLPSMWSTGNASLALF
Sbjct: 61  LLFKGIKAPVMLLSMQFCEVVTRPESSSQLMVSYLDSEDGLPSMWSTGNASLALF 115

[Close]
BLAST of Csor.00g222000 vs. NCBI nr
Match: KAG7035956.1 (hypothetical protein SDJN02_02756, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127 bits (320), Expect = 8.04e-35
Identity = 71/95 (74.74%), Postives = 76/95 (80.00%), Query Frame = 0 

Query: 1  MFQVIPEVDMAMNDEHDPSLQSSPVSWYVHFVL--------DLNVYRIFEAVPGDHMHKS 60
          MFQVIPEVDMAMN  +  S    PV+  ++ +L        DLNVYRIFEAVPGDHMHKS
Sbjct: 1  MFQVIPEVDMAMN--YWISSIPKPVNKEMNMILHCKALPFPDLNVYRIFEAVPGDHMHKS 60

Query: 61 LRIGMEATLLFKGIKAPVMLLSMQFCEVVTRPESS 87
          LRIGMEATLLFKGIKAPVMLLSMQFCEVVTRPESS
Sbjct: 61 LRIGMEATLLFKGIKAPVMLLSMQFCEVVTRPESS 93

The following BLAST results are available for this feature:
BLAST of Csor.00g222000 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g222000 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6606007.12.31e-77100.00hypothetical protein SDJN03_03324, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7035956.18.04e-3574.74hypothetical protein SDJN02_02756, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of Csor.00g222000 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g222000 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g222000.m02Csor.00g222000.m02mRNA