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Csor.00g221770 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGCAGTTCTCGCAGCTATGGCGGCGCAATCCCTCATCTCTGCCTCCCCTTCCAGCTACATCCAAGTGTCTCCCTTCTCAATTTCTTCCCCTCCGCCTTCCCTAATCTCCTCCTTCCATGGCGCCTCTCTCAAGCTACCTCGCCACTCCCTCTCCCTAGCAGCCTCCGTCGCCCCCAAGCCTTTTGTTGTCGTTGCCGCTACCAAGAAAGCCGTCGCCGTTCTCAAGGGTACTTCCAATGTCGAAGGCGTCGTCACGCTGACCCAAGAAGACGATGGTCTGTACACACTCTATCAATAGCTCTTTTGCCTCATCGTATCGTAGTGGGTTTCTCGTAGTTTAGGATTAAGGGTTCGAATCGATGTTTAGTATTTGATTTATGGGTGATTGAATCAAATGGCTGGGGTAATTGGAGTTGCCGTGGGGATTTTGAGGTTTATTTGGCGCCTAATTTCGAAGATTGACGTTGACTTTATTTGGAATGTGATTGTGCTAAGTGGAGTTTTTTTAATTTCTGCCTGCGTTGCTTTCTTCTTGACTGTTCTGTTATTTTTTTGTCATAATGTATTAGTAGTATGCGCGTAAGTTGACTTTTAGAACTAAATGAATATGATTGTTTTGATTTATGACGTTTACTTCTCGTAGGATTCTGTTGTCTTGTTGGCCTATACACTATGGTTATTCTAGAACCAAAAAGCTTTTAAGGACACATCCCCTTAAGAAAATTTCAACTATTAAGGCAATAATACTAGTAATGACGTTGAAGATTATTGAGAGAAGTAGTCTCACATTGGCTAATTAAGAGAAAGATCATTGGTTTATTGGTACGAGGCCTTTTGGGTAAACCAAAGGCAAACCCATGAGAGCTTATGCTCAAAGTAGATAATATCATATCATTGTGGAGGTTTGTGGTTTCTAACAATGAAAACAATGACGATAAGAATGAAAATGATAATAGTAATAGTAGTTGCAGTATTGTGATTCTGAAAAATGTTGTATTGTTGCTAGGTCCAACAACAGTAAATGTTCGAATTACCGGGCTCACGGAAGGGCTTCATGGATTCCATCTTGTAAGTAATTTGGCATTGGCTGACATGATCTATGGGCTTGTTGTTCTAATCAATCTACCTTCTTGTTTCCTTCTGTAGCATGAGTATGGAGACACAACAAATGGATGCATTTCTACAGGTAGTGTATGATCCATTGTCCATATTTGATTTTGATCCTTCTGTACCAAGAAGTTTTATTCTATCTAGCGAGGTTGTATTTTTGTCTCTCTTCAATTGTTTATGTATGATTTTCAATTATAGGACCACATTTCAATCCTAATAAGTTAACTCATGGTGCTCCTGAGGATGAAATCCGTCATGCGGGTGACCTGGGAAACATTGTTGCCAAGGCTGATGGTATCTGCTTCTTCTTTCTGAAAGGTTCTTTTATTTTTTGTTTCATGGATTTGTAACTTCTAATGCACGATATGCAGGAGTAGCGGAGGCAACCATTGTAGATAATCAGGTACCTCTATTATTTGATCCGTATCTGTCATCATCACAATCCATATGCTCAGAATTATTGATGTCTTTCATCATGAATGGCGTCGCAATAACCACAAATGTTGATGGTGGCAATGCCGCTGATAAAACTTCTTATATATATTGTACATGCATGTATTCATGACTGCAATTACCTTAGTATTGTCAAGTTCAAAGACAAAATTATGTTCAAGCCTTTATTTTAGATCTGGCCCTCTTAACCTACTCAGTTATTAATTCCTGATCTGTAGATTCCTCTCAGTGGCCCCAACTCTGTAGTTGGAAGAGCCTTTGTGGTACATGAGCTTGAGGATGATCTTGGAAAAGGTATGTTCTGTTCGTCGTTTCAATTTAGTTACATTCTTCACCTCCTTTTCGTTCCTCTTCATTTGATCAACCTACTCAAGTGATTTATCAAACAGATAAAAGAATTGAAAATAAGTTAATTTATGTTCTTGTTATCTTAGCTTCAGTTGTGTTTAATAGAATAAAATATAGTGCTATTAATAAAATTATGGGAAAAAGATATTGTAGTTCCCTTTTATAGATAGAACTGCAATATTAGCTGCTGATAGCGATGTCTGCATCACTTACCCCGGAATTTTTTTGTTCGACTATCAAAATTCAATATTTGTTCTCATTTTTTCTGGTTATGATTATGTAGGAGGTCATGAACTCAGTTCAACCACAGGCAACGCTGGTGGAAGATTGGCATGTGGTATGCAAACATAAAGTTCTTTTTTCTTCTCTCTCAAGAGTCCCGTGTTCTTTTTTCCCCATGCATGCCATGGCATATATCTTTATAATACTGCTTTGGTGATCAATTTGTTCGATTTAAATAGAATACAAGTTATAAACATGGGTGAACTATTCGACTATTTAAATTCTTTCTTATCCCTGGTGGGTTTCATTTCTTTTAATGCTTTCCAGGGGATTTCATCCCTATTTCATATCATCCCAAAGAACAAGAATTTCAGATTTCAAACATCGTTCCATTTCCTCCTCCTCCTTCCCAATTTCATTAGTTAATATTGCAGAAAGAACAAAGTTATTACTTGTTCAAAAAGAACTAACTTGTTACTGGTGACTTGGTGGATATTGAAGGCCTACGGTATACATTACTGAACTGATCTACCTTATTGAATACTGACTGACCTCTGGCTCCACGATGCAAGGAGATTCATAGCTTTATTTCAAATTCTCAGTCCTTATAGTCATTTTTCGGTTGTGTATGCCTCATGCCATGTGTGCTCTTTAATATGCAAGGAAGCTGAGTGAATACAGTATGCTTTAATTCAAATTCTCAGCTATGCATAGAGACCATGTGGTTCTCTTGTATATTTTATGAATTGCACAGCTTACTTCATTTATCAGACCCTTTGTGTAGGTAGATATGTGGTCTAAAAGTCTCTGCGCTGGCTATTGTTCTGATAGCCTGGCATGACATTTTTCCACCTTGTAGAAGTACTTTCAATAGAATCTAGTAACTTAGAAATGGGTTAATCAAGTTAAAATACTTCTGCTGAATGCATCAACATAGTTAACGTATAACTGTTCTAAACGCTTACATTAGCAGCTAATCAAACTGCAAACCTATTGCTTTGCTTGAGTGCCATGGTAGTAAACCACTGGCAATAGTAAAATCCAGACATTCCCTATTTGCTTCTAGATGCCTAAATATTGTCTTCTCAATGGTTTTTAATCCAGAATATGTGCTAATTGCTGATACAAGAGAATCTCAATCTTTTTTCTATTTCTCGTCTTTGCAGGTGTTGTCGGGCTGACTCCCGTGTAA ATGCAAGCAGTTCTCGCAGCTATGGCGGCGCAATCCCTCATCTCTGCCTCCCCTTCCAGCTACATCCAAGTGTCTCCCTTCTCAATTTCTTCCCCTCCGCCTTCCCTAATCTCCTCCTTCCATGGCGCCTCTCTCAAGCTACCTCGCCACTCCCTCTCCCTAGCAGCCTCCGTCGCCCCCAAGCCTTTTGTTGTCGTTGCCGCTACCAAGAAAGCCGTCGCCGTTCTCAAGGGTACTTCCAATGTCGAAGGCGTCGTCACGCTGACCCAAGAAGACGATGGTCCAACAACAGTAAATGTTCGAATTACCGGGCTCACGGAAGGGCTTCATGGATTCCATCTTCATGAGTATGGAGACACAACAAATGGATGCATTTCTACAGGACCACATTTCAATCCTAATAAGTTAACTCATGGTGCTCCTGAGGATGAAATCCGTCATGCGGGTGACCTGGGAAACATTGTTGCCAAGGCTGATGGAGTAGCGGAGGCAACCATTGTAGATAATCAGATTCCTCTCAGTGGCCCCAACTCTGTAGTTGGAAGAGCCTTTGTGGTACATGAGCTTGAGGATGATCTTGGAAAAGGAGGTCATGAACTCAGTTCAACCACAGGCAACGCTGGTGGAAGATTGGCATGTGGTGTTGTCGGGCTGACTCCCGTGTAA ATGCAAGCAGTTCTCGCAGCTATGGCGGCGCAATCCCTCATCTCTGCCTCCCCTTCCAGCTACATCCAAGTGTCTCCCTTCTCAATTTCTTCCCCTCCGCCTTCCCTAATCTCCTCCTTCCATGGCGCCTCTCTCAAGCTACCTCGCCACTCCCTCTCCCTAGCAGCCTCCGTCGCCCCCAAGCCTTTTGTTGTCGTTGCCGCTACCAAGAAAGCCGTCGCCGTTCTCAAGGGTACTTCCAATGTCGAAGGCGTCGTCACGCTGACCCAAGAAGACGATGGTCCAACAACAGTAAATGTTCGAATTACCGGGCTCACGGAAGGGCTTCATGGATTCCATCTTCATGAGTATGGAGACACAACAAATGGATGCATTTCTACAGGACCACATTTCAATCCTAATAAGTTAACTCATGGTGCTCCTGAGGATGAAATCCGTCATGCGGGTGACCTGGGAAACATTGTTGCCAAGGCTGATGGAGTAGCGGAGGCAACCATTGTAGATAATCAGATTCCTCTCAGTGGCCCCAACTCTGTAGTTGGAAGAGCCTTTGTGGTACATGAGCTTGAGGATGATCTTGGAAAAGGAGGTCATGAACTCAGTTCAACCACAGGCAACGCTGGTGGAAGATTGGCATGTGGTGTTGTCGGGCTGACTCCCGTGTAA MQAVLAAMAAQSLISASPSSYIQVSPFSISSPPPSLISSFHGASLKLPRHSLSLAASVAPKPFVVVAATKKAVAVLKGTSNVEGVVTLTQEDDGPTTVNVRITGLTEGLHGFHLHEYGDTTNGCISTGPHFNPNKLTHGAPEDEIRHAGDLGNIVAKADGVAEATIVDNQIPLSGPNSVVGRAFVVHELEDDLGKGGHELSSTTGNAGGRLACGVVGLTPV Homology
BLAST of Csor.00g221770 vs. ExPASy Swiss-Prot
Match: P07505 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Spinacia oleracea OX=3562 GN=SODCP PE=1 SV=2) HSP 1 Score: 315.1 bits (806), Expect = 6.4e-85 Identity = 169/223 (75.78%), Postives = 189/223 (84.75%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy Swiss-Prot
Match: O65199 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Vitis vinifera OX=29760 GN=SODCP PE=2 SV=1) HSP 1 Score: 313.5 bits (802), Expect = 1.9e-84 Identity = 161/214 (75.23%), Postives = 179/214 (83.64%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy Swiss-Prot
Match: P10792 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Petunia hybrida OX=4102 GN=SODCP PE=2 SV=1) HSP 1 Score: 312.0 bits (798), Expect = 5.4e-84 Identity = 163/219 (74.43%), Postives = 184/219 (84.02%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy Swiss-Prot
Match: P14831 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solanum lycopersicum OX=4081 GN=SODCP.2 PE=1 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 2.1e-83 Identity = 163/217 (75.12%), Postives = 179/217 (82.49%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy Swiss-Prot
Match: O04997 (Superoxide dismutase [Cu-Zn], chloroplastic OS=Solidago canadensis var. scabra OX=59294 GN=SODCP PE=2 SV=1) HSP 1 Score: 308.9 bits (790), Expect = 4.6e-83 Identity = 168/221 (76.02%), Postives = 187/221 (84.62%), Query Frame = 0
BLAST of Csor.00g221770 vs. NCBI nr
Match: XP_022958658.1 (superoxide dismutase [Cu-Zn], chloroplastic [Cucurbita moschata] >XP_022996071.1 superoxide dismutase [Cu-Zn], chloroplastic [Cucurbita maxima] >KAG6606030.1 Superoxide dismutase [Cu-Zn], chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 422 bits (1084), Expect = 1.87e-148 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g221770 vs. NCBI nr
Match: XP_023534101.1 (superoxide dismutase [Cu-Zn], chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 418 bits (1075), Expect = 4.40e-147 Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Csor.00g221770 vs. NCBI nr
Match: AWW05327.1 (superoxide dismutase [Cu-Zn] 1 [Cucurbita pepo]) HSP 1 Score: 417 bits (1072), Expect = 1.26e-146 Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Csor.00g221770 vs. NCBI nr
Match: APO14279.1 (superoxide dismutase 3 [Luffa aegyptiaca]) HSP 1 Score: 391 bits (1005), Expect = 2.06e-136 Identity = 204/221 (92.31%), Postives = 209/221 (94.57%), Query Frame = 0
BLAST of Csor.00g221770 vs. NCBI nr
Match: XP_038902141.1 (superoxide dismutase [Cu-Zn], chloroplastic [Benincasa hispida]) HSP 1 Score: 385 bits (990), Expect = 3.98e-134 Identity = 202/221 (91.40%), Postives = 207/221 (93.67%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy TrEMBL
Match: A0A6J1K3P0 (Superoxide dismutase [Cu-Zn] OS=Cucurbita maxima OX=3661 GN=LOC111491386 PE=3 SV=1) HSP 1 Score: 422 bits (1084), Expect = 9.05e-149 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy TrEMBL
Match: A0A6J1H3P6 (Superoxide dismutase [Cu-Zn] OS=Cucurbita moschata OX=3662 GN=LOC111459815 PE=3 SV=1) HSP 1 Score: 422 bits (1084), Expect = 9.05e-149 Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy TrEMBL
Match: A0A2Z4GT64 (Superoxide dismutase [Cu-Zn] OS=Cucurbita pepo OX=3663 PE=2 SV=1) HSP 1 Score: 417 bits (1072), Expect = 6.11e-147 Identity = 218/221 (98.64%), Postives = 220/221 (99.55%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy TrEMBL
Match: A0A1L5JHV7 (Superoxide dismutase [Cu-Zn] OS=Luffa aegyptiaca OX=3670 PE=2 SV=1) HSP 1 Score: 391 bits (1005), Expect = 9.98e-137 Identity = 204/221 (92.31%), Postives = 209/221 (94.57%), Query Frame = 0
BLAST of Csor.00g221770 vs. ExPASy TrEMBL
Match: A0A6J1CH19 (Superoxide dismutase [Cu-Zn] OS=Momordica charantia OX=3673 GN=LOC111011351 PE=3 SV=1) HSP 1 Score: 375 bits (962), Expect = 3.82e-130 Identity = 199/223 (89.24%), Postives = 204/223 (91.48%), Query Frame = 0
BLAST of Csor.00g221770 vs. TAIR 10
Match: AT2G28190.1 (copper/zinc superoxide dismutase 2 ) HSP 1 Score: 293.9 bits (751), Expect = 1.1e-79 Identity = 158/217 (72.81%), Postives = 175/217 (80.65%), Query Frame = 0
BLAST of Csor.00g221770 vs. TAIR 10
Match: AT1G08830.1 (copper/zinc superoxide dismutase 1 ) HSP 1 Score: 204.9 bits (520), Expect = 6.6e-53 Identity = 99/148 (66.89%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of Csor.00g221770 vs. TAIR 10
Match: AT1G08830.2 (copper/zinc superoxide dismutase 1 ) HSP 1 Score: 204.9 bits (520), Expect = 6.6e-53 Identity = 99/148 (66.89%), Postives = 112/148 (75.68%), Query Frame = 0
BLAST of Csor.00g221770 vs. TAIR 10
Match: AT5G18100.1 (copper/zinc superoxide dismutase 3 ) HSP 1 Score: 187.6 bits (475), Expect = 1.1e-47 Identity = 88/148 (59.46%), Postives = 110/148 (74.32%), Query Frame = 0
BLAST of Csor.00g221770 vs. TAIR 10
Match: AT5G18100.2 (copper/zinc superoxide dismutase 3 ) HSP 1 Score: 154.8 bits (390), Expect = 7.9e-38 Identity = 74/126 (58.73%), Postives = 91/126 (72.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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