Csor.00g221600 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g221600
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr02: 8430267 .. 8430937 (-)
RNA-Seq ExpressionCsor.00g221600
SyntenyCsor.00g221600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTAAATTAAATGTTTTGGCGTTGTGTACACAGAAGGAGTCGGGGACGACGTTATCGTTGAAGCGAAGTTGTTGGATTTTCTATATTCCAATATTACCCCGGGTTTTGGTTCGGAATTACGTGTATACCGGAGCCTTTGATTTTCCTTTTATAATCTCCGGTTGTTTTGTTTGTAAGTGTCTGGGAGTGAGGGGAATGGGAATAGGGTTGCAAAACCAAAGGAAATGGGGTATTAAATAGTAATTAGAATTAGGAGGCGAATTGGGTAATTTCAGTTGGAAGTCGCCCTCCAAAAAGGACTCGTGGAGGCTGGGTCTGTGCGCTGCGTGGAAGACAGGTGACACGGCAATGACCGCAACAATGAATAGAGCTTCTCCTTCTTGTTTATGGAGGATCTTCAACTTCAACCCTCGCCTCAATCCTACTTCTTCTTCCTTTTGATTTCCAACACACTTCTGAGATCTGTTTGATTATCAATTTCAGGTTCACGATCCACATTGCATCTGTTCTTCATTCTCTATCGTTCTTGTTCGTGTTTTGATTTGAATTGTGTTTTTCGTGGTGTATTCCGCCCGTTGTAGGACAATGCTCAATGTCGTGGTTGTCTGTTCATCTTTTGAATTATTGGTTTTTTGTTTTGAGTTGTTGGTTGGTTGATGTGTAGATAA

mRNA sequence

ATGTTTAAATTAAATGTTTTGGCGTTGTGTACACAGAAGGAGTCGGGGACGACGTTATCGTTGAAGCGAAGTTGTTGGATTTTCTATATTCCAATATTACCCCGGGTTTTGGTTCGGAATTACGTGTATACCGGAGCCTTTGATTTTCCTTTTATAATCTCCGGTTGTTTTGTTTGTAAGTGTCTGGGAGTGAGGGGAATGGGAATAGGGTTGCAAAACCAAAGGAAATGGGAGCTTCTCCTTCTTGTTTATGGAGGATCTTCAACTTCAACCCTCGCCTCAATCCTACTTCTTCTTCCTTTTGATTTCCAACACACTTCTGAGATCTGTTTGATTATCAATTTCAGATAA

Coding sequence (CDS)

ATGTTTAAATTAAATGTTTTGGCGTTGTGTACACAGAAGGAGTCGGGGACGACGTTATCGTTGAAGCGAAGTTGTTGGATTTTCTATATTCCAATATTACCCCGGGTTTTGGTTCGGAATTACGTGTATACCGGAGCCTTTGATTTTCCTTTTATAATCTCCGGTTGTTTTGTTTGTAAGTGTCTGGGAGTGAGGGGAATGGGAATAGGGTTGCAAAACCAAAGGAAATGGGAGCTTCTCCTTCTTGTTTATGGAGGATCTTCAACTTCAACCCTCGCCTCAATCCTACTTCTTCTTCCTTTTGATTTCCAACACACTTCTGAGATCTGTTTGATTATCAATTTCAGATAA

Protein sequence

MFKLNVLALCTQKESGTTLSLKRSCWIFYIPILPRVLVRNYVYTGAFDFPFIISGCFVCKCLGVRGMGIGLQNQRKWELLLLVYGGSSTSTLASILLLLPFDFQHTSEICLIINFR
Homology
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BLAST of Csor.00g221600 vs. NCBI nr
Match: KAG6606047.1 (hypothetical protein SDJN03_03364, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 238 bits (608), Expect = 2.58e-79
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0 

Query: 1   MFKLNVLALCTQKESGTTLSLKRSCWIFYIPILPRVLVRNYVYTGAFDFPFIISGCFVCK 60
           MFKLNVLALCTQKESGTTLSLKRSCWIFYIPILPRVLVRNYVYTGAFDFPFIISGCFVCK
Sbjct: 1   MFKLNVLALCTQKESGTTLSLKRSCWIFYIPILPRVLVRNYVYTGAFDFPFIISGCFVCK 60

Query: 61  CLGVRGMGIGLQNQRKWELLLLVYGGSSTSTLASILLLLPFDFQHTSEICLIINFR 116
           CLGVRGMGIGLQNQRKWELLLLVYGGSSTSTLASILLLLPFDFQHTSEICLIINFR
Sbjct: 61  CLGVRGMGIGLQNQRKWELLLLVYGGSSTSTLASILLLLPFDFQHTSEICLIINFR 116

The following BLAST results are available for this feature:
BLAST of Csor.00g221600 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g221600 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6606047.12.58e-79100.00hypothetical protein SDJN03_03364, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g221600 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g221600 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g221600.m01Csor.00g221600.m01mRNA