Csor.00g217980 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g217980
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	glutaredoxin-C4-like
Location	Csor_Chr10: 1761154 .. 1765091 (-)
RNA-Seq Expression	Csor.00g217980
Synteny	Csor.00g217980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGAGGTTAGTATTTTTTGTGTTTATTTTCTAGGTTGTTTAGTACACTTTGTAGAGTAATATGCTGATTTCCCACTTCATTCTTAGCCTTATAGTTCCCATTTGATGGAGACGGTTCTCACACCATCATTAGTGCATATTATTTATTTGGAGGAGGAAGAGGATGTTGTAGATCATATATGGTTACATACACTGTGAGCTCTGCCCTTTTACTCATTTCATATATGAAAACTTTGAACATTTCTGGGACTTGCTGTTAAAATCACTAGGCCGTAGTATGAACATTTCCTTCTTGATGATAGTGAGCGTTTCCTACATGTTTCTTAGTACTCTTATTGAATTCTCGTCATTGCTTCAATGATATGTTTTTCCACATGTTAAGAGCCACCGGGAGAAAGTTAGAGTCGAGTGTTTCATGGTGGTGGGTCGGTCTTTCTGAAACGATTGGAAATCCAACTCGACCTAACCCATTTTCACCTCTAATGTTTAGAGGCGTCGGGCAAAATGTTGGAGTCGAGTATTGTGAGATTCCACATTGGTTAGAGAGGGGAACGAAACATCACTTATAAGGGTGTGAAAACCTCTCCCTATCCCTATCAAACACGTTTTAAAATCTAGAGAAGAAGCATTTAAAGTAAAGTTCAAAGAGGACAATATCCGCTAACGGTGGATTTGGGCTGTCACTAGTATTCTGAAATGATTTAAGAAATCAGTTAGGATTTGCCATCCCGACCCATTTTCACCGTTCAACTTAGTATAACGTTGATGCAGAGGAATTTGGGAAGGAAAAGGGTGCTCATTGAAATCCAGACGTAGCCATGCATTTATTGTCAGGAAAGAATTCTATTTTCAGTCAAATTTGGAAACAACCAGATCCTCTTGTGGCCATGAATCCAGGGGCTGAGTGAGACATTGGCTTCACTATGCCTGTAGCCCATTACACAATCCACTGTGCATTTCCTCATGTTCATGAACCTGAAGTGCAATAGTATAAACTCAAATTCCTCTTCTTTTGTTTTTACAAACATCAAGGTATTGGGTTTTTTTTTCTTCTTCTGATCCTTGGTGTCAGCTTGAGTTCATCTCGACTATTTTCACGGGAGAATCATTTGATCCTACTATATTTGGTTACCAAACAAACTCAGGATAATAACTCAGAGATACAAACTCACTTCCTTTAACCCTTTTATTATATCCATGCCCGTTATCGATCATTAGGCTAACTCGTGCTGATTTTATATTAAAATATCATTTTAGTCTTCGTATATGAGATTTATTCTGTAATAGTCCAAGCCTACCGCTAACAGATATTGTCTGCTTTCTTCACGGTTAGGTTTCGATACCCATATAATCTCTTCAATTGATGTGAGATCTCATAATTCACTCTTTGGGAGCTAGCGTCCTCGTTGGCACACTGCTTAATATCTAACTCTTATATATACCATTTGTAATAGCTCAAGCCCACCGCTAGTAGATATTGGCTGCCTTAGCCCATTACGTATTACCGTCAATCTCACGGTTTTAAAACAAACCGCGTCTGCTAGGAAAATGTGAAATGTCATATTCCATTTTTGTTTATGTTATTTCAAATGTCTAAATTTAGTATAGTTTGAAATATGTTTTTAAAAATTGAATTCAGAGATATAAAAAAGAGTAATTTCCATTTAAGAAAAAACTTCATATGTTTTTCCTTATAGAGTGAGTGCTAATTAATTTTTACCTTTAACCTTAAATTAATAATATAAAGTCTTTTTTTTTTTTGAAATTATAAATATTAAATTTCGAAATTTAAAATTAACTAAACTGAATTAAGTCGAATAACCACCCGTGACTTGTTGCTGTTATTATATTATATATTATTATTATTATTATTATTATTATTATTATTATTATTATTACAGAAATATAGAATATTTATTTATTTATTTATTTGCAACCTAAAAAGCGTAATATCTTACAAGACGTGTGAATATACAAGAGATGCTGAATTTCAGTAATTGTCTTCTCTAAAATTACGCTTACGAGCATTTAATCGCCAATCGCAGAAACCTCACTGGAATAAGGTTAATTGCAGGCCGGAATTTGGATCAATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAAATCGTCATCTTCTCCAAGTCCTATTGCCCGTAATTTCCTTCTCATTCCTCTTTTCTCTTCTTAATCGATTTATTCAGACTCCATTGTGGATCTATTCGTCTCATTTCTCCAAATCGACTTTTGTTGTTCGGTTCTTGACCCGCTGTGGCCATGTTTTCTATTACTTTAAATTTTGTTGCCCTACATTTGGAAGCAGATCGAGGAAGGGGCGAGTTTCCGATTCTTTTAATTGTTGTTTTTGTGCATACAGATACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGGTACTTGCATAATCTGCCTTTTTCTCGTTCTTTTTATCAAAAGTAGCAATATCACCATGGCTTAAATCTGATTGAAACTCAGTATGTTTGTTTCTTGTTTTTGTGCTCCTTTTATTGCACGTCTTCTGTTGTTGCCCTGCCAGTATATCTAGATTTCGGACAATTTCATATGAAAATCTTGTTCTGGCCTATGCTCTCCGCATTATGAAAGTATTGGTTGGGATATTACACTTGATATGGGCATGCTTGATATCTAGATTTCGGAAAACTTAATATGAAAATCTTCTCTTACATCTTTTCTGATGATTTTGTCATCATTATTTAAATGAACGATCTTTTCAACTTAATTGTGACGGAGTAGTAAGAGAATTTGTGCTTAGTATTGCCTCCAGCCTCTCGAAATGGTGACTGCCTGCGACTGGAATATTTATGTATTAGGTCTTGTGACATGATTCTCTGTAAAATGCTTTCCTCTTCGAAACTAACATGGTCGTTTGGGATCGTCTATTCTCTTCATCTAAAATCCTCACTCTGGCTGAACATATGGCAACTGGTTTAGGCATATACTCTTGACTACGCAGTGAGAGGTTCGAATCCCCCCCCCATAGACGTGGTTGAACTAAAAAATGTTCAAATTACTCTATCTAATCAGATCACACACTCAGATCCACCCCCCAAACAACAATGGAAGGTAATTCCTTCTAGTTGTGTTCTTTTGGGAGTTAAGAGAGGGAGGGAAAAGAGTGGGGGATGGTAGAAAACAGCAATGAAAGGGAGAAACGGTGTGCAAGAGTGAGTCCTATTAGCTGTTGCCTGAAATGTCCATTTACTGACAAAACGTTTAGATTATGGGTCGACTAATTATGTATTATGTTGTACAAAATCCTCTTATTTTTATCTTTTTAGTTGATTTGCAGGTTCTTTGTAATGTTTTTTTCTATCTTGTTTCCCTTTTCGACATGGGTGGGGAGAATTCAAGCTTTGGATGAATTCTCTAAACGAACTAGCAAAAGGGTTATCAGTAAACATATATCTGGCTTTTGTTTCTGCATCTATGTATATCTGGTGGTGTTCCTTCATCTAAAGGTTAATAATACTCATAGAATTTGGATCTGTATCTCACAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCAGATGGTAATGGGCTCTTCTATGGCAAATTTTTGTGTGGTAACATATTTCTCCAAGTACTTCTAACTTATTGAAACCCTGATTCCAGATACCATTGAAGCATATGAGAGTGGGAAGTTGAGTAAGCTCCTGGGCATTAATGAAGAGCATAAAGCGGATCTTTGA

mRNA sequence

ATGAACGAGCCTTATAGTTCCCATTTGATGGAGACGGTTCTCACACCATCATTAGTGCATATTATTTATTTGGAGGAGGAAGAGGATGTTGTAGATCATATATGGTTACATACACTGCCGGAATTTGGATCAATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAAATCGTCATCTTCTCCAAGTCCTATTGCCCATACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCAGATGATACCATTGAAGCATATGAGAGTGGGAAGTTGAGTAAGCTCCTGGGCATTAATGAAGAGCATAAAGCGGATCTTTGA

Coding sequence (CDS)

ATGAACGAGCCTTATAGTTCCCATTTGATGGAGACGGTTCTCACACCATCATTAGTGCATATTATTTATTTGGAGGAGGAAGAGGATGTTGTAGATCATATATGGTTACATACACTGCCGGAATTTGGATCAATGGCAGCGACGATGAGTATGAGGAAGATGCTGACGGTATCAGCAGCTATGGTCTGCGCCGTAGCCGTAGCGTCTTTATACGGGGCCTCAGCTTCCACGGAAACACGCTTCATCAAGAACACCATCGCCTCGCATCAAATCGTCATCTTCTCCAAGTCCTATTGCCCATACTGTAGAAGGGCAAAAGCTGTTTTCAAGGAATTGAACAAAGTTCCTTATGTTGTTGAGCTGGATCAAAGAGAGGATGGCAGTGACATTCAAGATGCTTTTATGGCACTCATCGGAAGGCGCACTGTACCTCAAGTGTTCGTAAATGGAAAACACATAGGTGGATCAGATGATACCATTGAAGCATATGAGAGTGGGAAGTTGAGTAAGCTCCTGGGCATTAATGAAGAGCATAAAGCGGATCTTTGA

Protein sequence

MNEPYSSHLMETVLTPSLVHIIYLEEEEDVVDHIWLHTLPEFGSMAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLLGINEEHKADL

Homology

[Close]

BLAST of Csor.00g217980 vs. ExPASy Swiss-Prot
Match: Q8LFQ6 (Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2)

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-39
Identity = 78/135 (57.78%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 49  MSMRKMLTVSAAMVCAVAVASLYGASAST-ETRFIKNTIASHQIVIFSKSYCPYCRRAKA 108
           M+M + +++   +V  V   S+  ++AS+ E  F+K TI+SH+IVIFSKSYCPYC++AK+
Sbjct: 1   MTMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKS 60

Query: 109 VFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGK 168
           VF+EL++VPYVVELD+REDG  IQ A   ++GRRTVPQVF+NGKH+GGSDDT++AYESG+
Sbjct: 61  VFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGE 120

Query: 169 LSKLLGINEEHKADL 183
           L+KLLG++   +A+L
Sbjct: 121 LAKLLGVSGNKEAEL 135

[Close]

BLAST of Csor.00g217980 vs. ExPASy Swiss-Prot
Match: Q0DAE4 (Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2)

HSP 1 Score: 159.8 bits (403), Expect = 2.8e-38
Identity = 83/133 (62.41%), Postives = 105/133 (78.95%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MAA +  R+    +AA++   A+ S    +AS ++ F+K+T+ +H +VIFSKSYCPYCRR
Sbjct: 1   MAALLG-RRFGMAAAALIALAALGSAASGTAS-KSSFVKSTVKAHDVVIFSKSYCPYCRR 60

Query: 105 AKAVFK--ELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEA 164
           AKAVFK  EL K PYVVELDQREDG +IQDA   ++GRRTVPQVFV+GKH+GGSDDT+EA
Sbjct: 61  AKAVFKELELKKEPYVVELDQREDGWEIQDALSDMVGRRTVPQVFVHGKHLGGSDDTVEA 120

Query: 165 YESGKLSKLLGIN 176
           YESGKL+KLL I+
Sbjct: 121 YESGKLAKLLNID 131

[Close]

BLAST of Csor.00g217980 vs. ExPASy Swiss-Prot
Match: Q9FVX1 (Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.1e-29
Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 50  SMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVF 109
           S R+++  +  +   +   S    +A++ + F++N I S++IVIFSKSYCPYC R+K +F
Sbjct: 5   SPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIF 64

Query: 110 KELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLS 169
            +L + P+VVELDQREDG  IQ   +  +GRRTVPQVFVNGKHIGGSDD   A ESG+L 
Sbjct: 65  SQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQ 124

Query: 170 KLL 173
           KLL
Sbjct: 125 KLL 127

[Close]

BLAST of Csor.00g217980 vs. ExPASy Swiss-Prot
Match: Q6H628 (Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 4.1e-29
Identity = 57/107 (53.27%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 73  ASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQD 132
           A+  + + F++N I S++I IFSK+YCPY  RAK +F++L + PY+VELD REDG +IQ 
Sbjct: 25  AATRSPSAFVQNAIYSNRITIFSKTYCPYSMRAKRIFRDLKENPYIVELDLREDGREIQS 84

Query: 133 AFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLLGINEEHK 180
             + L+GR TVPQVFVNG+H+GGSDDT  A+ +G+L KLLG ++  +
Sbjct: 85  VLLDLVGRHTVPQVFVNGQHVGGSDDTANAHSNGQLQKLLGNSQSQR 131

[Close]

BLAST of Csor.00g217980 vs. ExPASy Swiss-Prot
Match: P55142 (Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2)

HSP 1 Score: 102.1 bits (253), Expect = 7.0e-21
Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 0


Query: 83  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 142
           K T+AS  +V++SKSYCP+C R K +F++L      +ELD   DGS++Q A     G+RT
Sbjct: 7   KETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKAIELDGESDGSELQSALAEWTGQRT 66

Query: 143 VPQVFVNGKHIGGSDDTIEAYESGKLSKLL 173
           VP VF+NGKHIGG DDT+     GKL  LL
Sbjct: 67  VPNVFINGKHIGGCDDTLALNNEGKLVPLL 96

[Close]

BLAST of Csor.00g217980 vs. NCBI nr
Match: KAG6589674.1 (Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 358 bits (919), Expect = 1.37e-124
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 0


Query: 1   MNEPYSSHLMETVLTPSLVHIIYLEEEEDVVDHIWLHTLPEFGSMAATMSMRKMLTVSAA 60
           MNEPYSSHLMETVLTPSLVHIIYLEEEEDVVDHIWLHTLPEFGSMAATMSMRKMLTVSAA
Sbjct: 1   MNEPYSSHLMETVLTPSLVHIIYLEEEEDVVDHIWLHTLPEFGSMAATMSMRKMLTVSAA 60

Query: 61  MVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVE 120
           MVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVE
Sbjct: 61  MVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVE 120

Query: 121 LDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLLGINEEHKA 180
           LDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLLGINEEHKA
Sbjct: 121 LDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLLGINEEHKA 180

Query: 181 DL 182
           DL
Sbjct: 181 DL 182

[Close]

BLAST of Csor.00g217980 vs. NCBI nr
Match: XP_023516627.1 (glutaredoxin-C4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265 bits (678), Expect = 1.64e-88
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MAATMSMRKMLT+SAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTLSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Csor.00g217980 vs. NCBI nr
Match: XP_022987347.1 (glutaredoxin-C4-like [Cucurbita maxima])

HSP 1 Score: 265 bits (677), Expect = 2.33e-88
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MA TMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Csor.00g217980 vs. NCBI nr
Match: XP_022921332.1 (glutaredoxin-C4-like [Cucurbita moschata])

HSP 1 Score: 265 bits (677), Expect = 2.33e-88
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKELNKVPYVVELDQREDGS+IQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Csor.00g217980 vs. NCBI nr
Match: TYK28556.1 (glutaredoxin-C4-like [Cucumis melo var. makuwa])

HSP 1 Score: 219 bits (558), Expect = 3.02e-70
Identity = 113/138 (81.88%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MAAT+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SG+LSKLLGI E+HKADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Csor.00g217980 vs. ExPASy TrEMBL
Match: A0A6J1JA45 (glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484927 PE=3 SV=1)

HSP 1 Score: 265 bits (677), Expect = 1.13e-88
Identity = 137/138 (99.28%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MA TMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAVTMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Csor.00g217980 vs. ExPASy TrEMBL
Match: A0A6J1E059 (glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1)

HSP 1 Score: 265 bits (677), Expect = 1.13e-88
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKELNKVPYVVELDQREDGS+IQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE
Sbjct: 61  AKAVFKELNKVPYVVELDQREDGSEIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SGKLSKLLGINEEHKADL
Sbjct: 121 SGKLSKLLGINEEHKADL 138

[Close]

BLAST of Csor.00g217980 vs. ExPASy TrEMBL
Match: A0A5D3DXQ7 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002030 PE=3 SV=1)

HSP 1 Score: 219 bits (558), Expect = 1.46e-70
Identity = 113/138 (81.88%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MAAT+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SG+LSKLLGI E+HKADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Csor.00g217980 vs. ExPASy TrEMBL
Match: A0A0A0LXH3 (Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G427520 PE=3 SV=1)

HSP 1 Score: 219 bits (557), Expect = 2.07e-70
Identity = 112/138 (81.16%), Postives = 127/138 (92.03%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MAAT+SMRK+LT SAAMVCAVA+ASL GAS+S E+ FIKNTIASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCGASSSPES-FIKNTIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKEL+KVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELHKVPHVVELDQRDDGSSLQNALSVLFGRRTVPQVFIDGKHIGGSDDTLEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SG+L KLLGI E+HKADL
Sbjct: 121 SGELRKLLGIKEDHKADL 137

[Close]

BLAST of Csor.00g217980 vs. ExPASy TrEMBL
Match: A0A5A7UQP8 (Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005140 PE=3 SV=1)

HSP 1 Score: 217 bits (553), Expect = 8.42e-70
Identity = 112/138 (81.16%), Postives = 126/138 (91.30%), Query Frame = 0


Query: 45  MAATMSMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRR 104
           MAAT+SMRK+LT SAAMVCAVA+ASL  AS+S E+ FIKN IASHQIVIFSKSYCPYCRR
Sbjct: 1   MAATVSMRKILTASAAMVCAVAIASLCRASSSPES-FIKNAIASHQIVIFSKSYCPYCRR 60

Query: 105 AKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYE 164
           AKAVFKELNKVP+VVELDQR+DGS +Q+A   L GRRTVPQVF++GKHIGGSDDT+EAYE
Sbjct: 61  AKAVFKELNKVPHVVELDQRDDGSALQNALSVLFGRRTVPQVFIDGKHIGGSDDTVEAYE 120

Query: 165 SGKLSKLLGINEEHKADL 182
           SG+LSKLLGI E+HKADL
Sbjct: 121 SGELSKLLGIKEDHKADL 137

[Close]

BLAST of Csor.00g217980 vs. TAIR 10
Match: AT5G20500.1 (Glutaredoxin family protein )

HSP 1 Score: 163.7 bits (413), Expect = 1.4e-40
Identity = 78/135 (57.78%), Postives = 110/135 (81.48%), Query Frame = 0


Query: 49  MSMRKMLTVSAAMVCAVAVASLYGASAST-ETRFIKNTIASHQIVIFSKSYCPYCRRAKA 108
           M+M + +++   +V  V   S+  ++AS+ E  F+K TI+SH+IVIFSKSYCPYC++AK+
Sbjct: 1   MTMFRSISMVMLLVALVTFISMVSSAASSPEADFVKKTISSHKIVIFSKSYCPYCKKAKS 60

Query: 109 VFKELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGK 168
           VF+EL++VPYVVELD+REDG  IQ A   ++GRRTVPQVF+NGKH+GGSDDT++AYESG+
Sbjct: 61  VFRELDQVPYVVELDEREDGWSIQTALGEIVGRRTVPQVFINGKHLGGSDDTVDAYESGE 120

Query: 169 LSKLLGINEEHKADL 183
           L+KLLG++   +A+L
Sbjct: 121 LAKLLGVSGNKEAEL 135

[Close]

BLAST of Csor.00g217980 vs. TAIR 10
Match: AT1G77370.1 (Glutaredoxin family protein )

HSP 1 Score: 131.3 bits (329), Expect = 7.7e-31
Identity = 65/123 (52.85%), Postives = 87/123 (70.73%), Query Frame = 0


Query: 50  SMRKMLTVSAAMVCAVAVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVF 109
           S R+++  +  +   +   S    +A++ + F++N I S++IVIFSKSYCPYC R+K +F
Sbjct: 5   SPRRVVVAALLLFVVLCDLSNSAGAANSVSAFVQNAILSNKIVIFSKSYCPYCLRSKRIF 64

Query: 110 KELNKVPYVVELDQREDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLS 169
            +L + P+VVELDQREDG  IQ   +  +GRRTVPQVFVNGKHIGGSDD   A ESG+L 
Sbjct: 65  SQLKEEPFVVELDQREDGDQIQYELLEFVGRRTVPQVFVNGKHIGGSDDLGAALESGQLQ 124

Query: 170 KLL 173
           KLL
Sbjct: 125 KLL 127

[Close]

BLAST of Csor.00g217980 vs. TAIR 10
Match: AT2G20270.1 (Thioredoxin superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 3.0e-19
Identity = 44/108 (40.74%), Postives = 69/108 (63.89%), Query Frame = 0


Query: 66  AVASLYGASASTETRFIKNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQ-R 125
           A++S   +S ST    +K T+A + +V++SK++C Y  + K++FK L   P VVELDQ  
Sbjct: 62  AMSSSSSSSGSTLEETVKTTVAENPVVVYSKTWCSYSSQVKSLFKSLQVEPLVVELDQLG 121

Query: 126 EDGSDIQDAFMALIGRRTVPQVFVNGKHIGGSDDTIEAYESGKLSKLL 173
            +GS +Q+    + G+ TVP VF+ GKHIGG  DT++ +  G+L  +L
Sbjct: 122 SEGSQLQNVLEKITGQYTVPNVFIGGKHIGGCSDTLQLHNKGELEAIL 169

[Close]

BLAST of Csor.00g217980 vs. TAIR 10
Match: AT5G40370.1 (Glutaredoxin family protein )

HSP 1 Score: 89.7 bits (221), Expect = 2.6e-18
Identity = 42/90 (46.67%), Postives = 53/90 (58.89%), Query Frame = 0


Query: 83  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 142
           K  + S  +V+FSK+YCPYC R K + ++L      VELD   DGS IQ       G+RT
Sbjct: 7   KEIVNSESVVVFSKTYCPYCVRVKELLQQLGAKFKAVELDTESDGSQIQSGLAEWTGQRT 66

Query: 143 VPQVFVNGKHIGGSDDTIEAYESGKLSKLL 173
           VP VF+ G HIGG D T   ++ GKL  LL
Sbjct: 67  VPNVFIGGNHIGGCDATSNLHKDGKLVPLL 96

[Close]

BLAST of Csor.00g217980 vs. TAIR 10
Match: AT5G63030.1 (Thioredoxin superfamily protein )

HSP 1 Score: 87.8 bits (216), Expect = 9.7e-18
Identity = 39/90 (43.33%), Postives = 56/90 (62.22%), Query Frame = 0


Query: 83  KNTIASHQIVIFSKSYCPYCRRAKAVFKELNKVPYVVELDQREDGSDIQDAFMALIGRRT 142
           K  ++++ +V+FSK+YC YC+R K +  +L     V+ELD+  DG +IQ A     G+ T
Sbjct: 23  KEIVSAYPVVVFSKTYCGYCQRVKQLLTQLGATFKVLELDEMSDGGEIQSALSEWTGQTT 82

Query: 143 VPQVFVNGKHIGGSDDTIEAYESGKLSKLL 173
           VP VF+ G HIGG D  +E  + GKL  LL
Sbjct: 83  VPNVFIKGNHIGGCDRVMETNKQGKLVPLL 112

The following BLAST results are available for this feature:

BLAST of Csor.00g217980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LFQ6	2.0e-39	57.78	Glutaredoxin-C4 OS=Arabidopsis thaliana OX=3702 GN=GRXC4 PE=2 SV=2	[more]
Q0DAE4	2.8e-38	62.41	Glutaredoxin-C8 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC8 PE=2 SV=2	[more]
Q9FVX1	1.1e-29	52.85	Glutaredoxin-C3 OS=Arabidopsis thaliana OX=3702 GN=GRXC3 PE=2 SV=1	[more]
Q6H628	4.1e-29	53.27	Monothiol glutaredoxin-S6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXS6 PE=2...	[more]
P55142	7.0e-21	51.11	Glutaredoxin-C6 OS=Oryza sativa subsp. japonica OX=39947 GN=GRXC6 PE=1 SV=2	[more]

BLAST of Csor.00g217980 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589674.1	1.37e-124	100.00	Glutaredoxin-C4, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023516627.1	1.64e-88	99.28	glutaredoxin-C4-like [Cucurbita pepo subsp. pepo]	[more]
XP_022987347.1	2.33e-88	99.28	glutaredoxin-C4-like [Cucurbita maxima]	[more]
XP_022921332.1	2.33e-88	99.28	glutaredoxin-C4-like [Cucurbita moschata]	[more]
TYK28556.1	3.02e-70	81.88	glutaredoxin-C4-like [Cucumis melo var. makuwa]	[more]

BLAST of Csor.00g217980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JA45	1.13e-88	99.28	glutaredoxin-C4-like OS=Cucurbita maxima OX=3661 GN=LOC111484927 PE=3 SV=1	[more]
A0A6J1E059	1.13e-88	99.28	glutaredoxin-C4-like OS=Cucurbita moschata OX=3662 GN=LOC111429636 PE=3 SV=1	[more]
A0A5D3DXQ7	1.46e-70	81.88	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629...	[more]
A0A0A0LXH3	2.07e-70	81.16	Glutaredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G42752...	[more]
A0A5A7UQP8	8.42e-70	81.16	Glutaredoxin-C4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274...	[more]

BLAST of Csor.00g217980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20500.1	1.4e-40	57.78	Glutaredoxin family protein	[more]
AT1G77370.1	7.7e-31	52.85	Glutaredoxin family protein	[more]
AT2G20270.1	3.0e-19	40.74	Thioredoxin superfamily protein	[more]
AT5G40370.1	2.6e-18	46.67	Glutaredoxin family protein	[more]
AT5G63030.1	9.7e-18	43.33	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014025	Glutaredoxin subgroup	PRINTS	PR00160	GLUTAREDOXIN	coord: 91..109 score: 47.81 coord: 136..149 score: 51.79 coord: 150..163 score: 43.45
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 76..181 e-value: 7.4E-38 score: 130.7
None	No IPR available	PIRSR	PIRSR001488-1	PIRSR001488-1	coord: 51..110 e-value: 0.22 score: 8.9
None	No IPR available	PANTHER	PTHR45694	GLUTAREDOXIN 2	coord: 54..169
None	No IPR available	PANTHER	PTHR45694:SF19	BNAA02G04900D PROTEIN	coord: 54..169
None	No IPR available	PROSITE	PS51354	GLUTAREDOXIN_2	coord: 79..179 score: 23.710058
None	No IPR available	CDD	cd03419	GRX_GRXh_1_2_like	coord: 91..171 e-value: 1.55893E-46 score: 145.375
IPR011899	Glutaredoxin, eukaryotic/virial	TIGRFAM	TIGR02180	TIGR02180	coord: 91..172 e-value: 1.3E-30 score: 103.4
IPR002109	Glutaredoxin	PFAM	PF00462	Glutaredoxin	coord: 91..153 e-value: 6.5E-20 score: 71.1
IPR011767	Glutaredoxin active site	PROSITE	PS00195	GLUTAREDOXIN_1	coord: 93..108
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 81..172

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g217980.m01	Csor.00g217980.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0098869	cellular oxidant detoxification
biological_process	GO:0034599	cellular response to oxidative stress
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0008794	arsenate reductase (glutaredoxin) activity
molecular_function	GO:0004362	glutathione-disulfide reductase (NADPH) activity
molecular_function	GO:0097573	glutathione oxidoreductase activity