Csor.00g217850 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGCAACTTACCATTTCGGTGCAGAACAAAATGCATGGAATTATGCAAGCTACGATCGCTAGTGACTATAAAAGTTATGAGAGTCATGGTAACTATGGTGATCGCATCCCATACGGGAGTGACCCTGGCTGTCAGCCCGCAATGGTGGACACTGAGAATGCTGTTAGAATACCTGAGAAGAGAAGAAGAAATGAGGTTCCGTCGGCAATACTTGAGGTGGAGCAGGAGGACTTGATTAAGAATCGACCGAGGCAGAATCAGGTCAAGTTAACTGGAATTGCTTTTGGTCCTTCTTACCAGGTATGTCACTTATAGCTTCATCGCAAATAACATACAATGTGGTTCTATGTTATGTAGCGCTAGGATGGTGAAATCACCATTCCATAGAGCTTTTATTTGGATGTTTGTGCATAAATATATAGGGTTCTGGGTTCAAATGTCGTGGCTGGTGGCTAAGTATTTTGAAAAATATAATTTTGCAGCTAAATGTAGTTGGGTTGTGAGATTAGTCAATGTATGTGAGAAATCTAAAGTTGTTCTTTTTCTCCAATTCGCATGAGAAGGAAGGGAAGACTTATCCTTTGCGACCCACTTCTCTAATTTTGGCTGATAAGGAGCTCAAGAGATTGCAGTGGTCGGTTAGTTATGAGGGAGGGAAAACAACAGATAAAGCAGGGTTTCACATTGTTTAAAATGGAAGTGATTCCTTGGAATGTAAGAGGTTTGAGGGGTAAGGAGTAGGAGATCGGTTAAAGAGGTCATTGTCCAGAAGAAAAATGCAGTCTAAACTCACCCCTAGTAGATATTGTCCGCTTTAGCTTGTTGTATATCGTTGTCAGCCGCCTCACGATTTTAAAATGTGTCCGAGGTAGGGATGTCACACCTTTTGAGGTATTATCATAATATGGGACGCCTCAATTGCCAAATATTTGGGAGTGGTTAGAGGGTTCTTTTCAGTGTCCTCGGGTGTCTGGAGTTTATGGGCCTCCCAGACAGATAGGAAGGAATTATAGGATGAGTTGGGTAGGTTGTCAGCTTTTTGTGGGCCCTTGAATTCTTTCATCCATTTTTTTTTCTCAAATAAAATTGTCAAGTTTTTTCATAAAAAATAATTTTATCTCTACTGCACTGTTATGTTTGCCTGCATCTCCGTTTCTGTAGCCTAACTCGACAAAGGGGAAGCCTTCAAAGTTGCACAAGAGAAAGCATCAAATCACTTCGTTGTATTATGATATGAAGCAAAAAGAGAGAGAATTAACCGAGAGGCGTGCGAGGGGTCTACAAACAAAGGCTGAAACACGAGGAAACTATGGCTGGTGA ATGCTGCAACTTACCATTTCGGTGCAGAACAAAATGCATGGAATTATGCAAGCTACGATCGCTAGTGACTATAAAAGTTATGAGAGTCATGGTAACTATGGTGATCGCATCCCATACGGGAGTGACCCTGGCTGTCAGCCCGCAATGGTGGACACTGAGAATGCTGTTAGAATACCTGAGAAGAGAAGAAGAAATGAGGTTCCGTCGGCAATACTTGAGGTGGAGCAGGAGGACTTGATTAAGAATCGACCGAGGCAGAATCAGGTCAAGTTAACTGGAATTGCTTTTGGTCCTTCTTACCAGCCTAACTCGACAAAGGGGAAGCCTTCAAAGTTGCACAAGAGAAAGCATCAAATCACTTCGTTGTATTATGATATGAAGCAAAAAGAGAGAGAATTAACCGAGAGGCGTGCGAGGGGTCTACAAACAAAGGCTGAAACACGAGGAAACTATGGCTGGTGA ATGCTGCAACTTACCATTTCGGTGCAGAACAAAATGCATGGAATTATGCAAGCTACGATCGCTAGTGACTATAAAAGTTATGAGAGTCATGGTAACTATGGTGATCGCATCCCATACGGGAGTGACCCTGGCTGTCAGCCCGCAATGGTGGACACTGAGAATGCTGTTAGAATACCTGAGAAGAGAAGAAGAAATGAGGTTCCGTCGGCAATACTTGAGGTGGAGCAGGAGGACTTGATTAAGAATCGACCGAGGCAGAATCAGGTCAAGTTAACTGGAATTGCTTTTGGTCCTTCTTACCAGCCTAACTCGACAAAGGGGAAGCCTTCAAAGTTGCACAAGAGAAAGCATCAAATCACTTCGTTGTATTATGATATGAAGCAAAAAGAGAGAGAATTAACCGAGAGGCGTGCGAGGGGTCTACAAACAAAGGCTGAAACACGAGGAAACTATGGCTGGTGA MLQLTISVQNKMHGIMQATIASDYKSYESHGNYGDRIPYGSDPGCQPAMVDTENAVRIPEKRRRNEVPSAILEVEQEDLIKNRPRQNQVKLTGIAFGPSYQPNSTKGKPSKLHKRKHQITSLYYDMKQKERELTERRARGLQTKAETRGNYGW Homology
BLAST of Csor.00g217850 vs. NCBI nr
Match: KAG6589687.1 (hypothetical protein SDJN03_15110, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 310 bits (793), Expect = 2.49e-106 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g217850 vs. NCBI nr
Match: KAG7023367.1 (hypothetical protein SDJN02_14392, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 289 bits (739), Expect = 1.37e-95 Identity = 151/177 (85.31%), Postives = 151/177 (85.31%), Query Frame = 0
BLAST of Csor.00g217850 vs. NCBI nr
Match: XP_038878727.1 (LOW QUALITY PROTEIN: uncharacterized protein LOC120070904 [Benincasa hispida]) HSP 1 Score: 220 bits (561), Expect = 7.52e-67 Identity = 110/148 (74.32%), Postives = 124/148 (83.78%), Query Frame = 0
BLAST of Csor.00g217850 vs. NCBI nr
Match: XP_022135049.1 (proline-rich protein PRCC [Momordica charantia]) HSP 1 Score: 219 bits (559), Expect = 1.61e-66 Identity = 107/147 (72.79%), Postives = 124/147 (84.35%), Query Frame = 0
BLAST of Csor.00g217850 vs. NCBI nr
Match: TYK28575.1 (ubiquitin carboxyl-terminal hydrolase 36 [Cucumis melo var. makuwa]) HSP 1 Score: 219 bits (559), Expect = 1.68e-66 Identity = 108/136 (79.41%), Postives = 119/136 (87.50%), Query Frame = 0
BLAST of Csor.00g217850 vs. ExPASy TrEMBL
Match: A0A6J1C0D7 (proline-rich protein PRCC OS=Momordica charantia OX=3673 GN=LOC111007134 PE=4 SV=1) HSP 1 Score: 219 bits (559), Expect = 7.78e-67 Identity = 107/147 (72.79%), Postives = 124/147 (84.35%), Query Frame = 0
BLAST of Csor.00g217850 vs. ExPASy TrEMBL
Match: A0A5D3DZ12 (Ubiquitin carboxyl-terminal hydrolase 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G002230 PE=4 SV=1) HSP 1 Score: 219 bits (559), Expect = 8.16e-67 Identity = 108/136 (79.41%), Postives = 119/136 (87.50%), Query Frame = 0
BLAST of Csor.00g217850 vs. ExPASy TrEMBL
Match: A0A5A7USS5 (Ubiquitin carboxyl-terminal hydrolase 36 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G005320 PE=4 SV=1) HSP 1 Score: 218 bits (556), Expect = 2.29e-66 Identity = 107/136 (78.68%), Postives = 119/136 (87.50%), Query Frame = 0
BLAST of Csor.00g217850 vs. ExPASy TrEMBL
Match: A0A1S3BWI7 (ubiquitin carboxyl-terminal hydrolase 36 OS=Cucumis melo OX=3656 GN=LOC103494234 PE=4 SV=1) HSP 1 Score: 218 bits (556), Expect = 2.29e-66 Identity = 107/136 (78.68%), Postives = 119/136 (87.50%), Query Frame = 0
BLAST of Csor.00g217850 vs. ExPASy TrEMBL
Match: A0A0A0LUQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G425920 PE=4 SV=1) HSP 1 Score: 213 bits (542), Expect = 2.74e-64 Identity = 105/136 (77.21%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of Csor.00g217850 vs. TAIR 10
Match: AT2G19270.1 (CONTAINS InterPro DOMAIN/s: Mitotic checkpoint protein PRCC, C-terminal (InterPro:IPR018800); Has 930 Blast hits to 533 proteins in 146 species: Archae - 0; Bacteria - 18; Metazoa - 327; Fungi - 143; Plants - 61; Viruses - 0; Other Eukaryotes - 381 (source: NCBI BLink). ) HSP 1 Score: 126.7 bits (317), Expect = 1.6e-29 Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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