Csor.00g217320 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g217320
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	transcription factor IBH1-like 1
Location	Csor_Chr10: 2072139 .. 2072606 (-)
RNA-Seq Expression	Csor.00g217320
Synteny	Csor.00g217320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGTCGCCGACAGAAAAAGGGCCATAAAGTTATCCGCTGATATTGCTTTGGCGTCCTCCAGAAACTGTGCCACTCGTTGGAGCCGAGCTGTCATCGCTGGCACCTCCGTTCACGATGGCAGCTTCCTGGTGGCTAACGGCGTATTGGGTCGTGCCGTATGCGAGAGAATCAAGGAAAGCAGTTCAAAAATCACGCGAAGTTCGTGGAGTAGTCGGAAGATTCTCAAACGGAGCCGCCGTGTGGGGCGGAGGAAAAAATGTAGGAAGCCGGCTGCTGAGTGGATTGCAAAAAGGTTGGTGCAAAAAAGAACAAGAACGCTTCGTGGGTTGGTTCCCGGAGGTGAATTTATGGATGAAGTTTCGTTAATTGAAGAAACCCTAGATTACATTTTGGCTCTTCAAACTCAGGTTGATGTCATGCGGTGTCTTGCAACGACTGCATACGTAGCGCCACCATCATTATGA

mRNA sequence

ATGACCGTCGCCGACAGAAAAAGGGCCATAAAGTTATCCGCTGATATTGCTTTGGCGTCCTCCAGAAACTGTGCCACTCGTTGGAGCCGAGCTGTCATCGCTGGCACCTCCGTTCACGATGGCAGCTTCCTGGTGGCTAACGGCGTATTGGGTCGTGCCGTATGCGAGAGAATCAAGGAAAGCAGTTCAAAAATCACGCGAAGTTCGTGGAGTAGTCGGAAGATTCTCAAACGGAGCCGCCGTGTGGGGCGGAGGAAAAAATGTAGGAAGCCGGCTGCTGAGTGGATTGCAAAAAGGTTGGTGCAAAAAAGAACAAGAACGCTTCGTGGGTTGGTTCCCGGAGGTGAATTTATGGATGAAGTTTCGTTAATTGAAGAAACCCTAGATTACATTTTGGCTCTTCAAACTCAGGTTGATGTCATGCGGTGTCTTGCAACGACTGCATACGTAGCGCCACCATCATTATGA

Coding sequence (CDS)

ATGACCGTCGCCGACAGAAAAAGGGCCATAAAGTTATCCGCTGATATTGCTTTGGCGTCCTCCAGAAACTGTGCCACTCGTTGGAGCCGAGCTGTCATCGCTGGCACCTCCGTTCACGATGGCAGCTTCCTGGTGGCTAACGGCGTATTGGGTCGTGCCGTATGCGAGAGAATCAAGGAAAGCAGTTCAAAAATCACGCGAAGTTCGTGGAGTAGTCGGAAGATTCTCAAACGGAGCCGCCGTGTGGGGCGGAGGAAAAAATGTAGGAAGCCGGCTGCTGAGTGGATTGCAAAAAGGTTGGTGCAAAAAAGAACAAGAACGCTTCGTGGGTTGGTTCCCGGAGGTGAATTTATGGATGAAGTTTCGTTAATTGAAGAAACCCTAGATTACATTTTGGCTCTTCAAACTCAGGTTGATGTCATGCGGTGTCTTGCAACGACTGCATACGTAGCGCCACCATCATTATGA

Protein sequence

MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKESSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDEVSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL

Homology

[Close]

BLAST of Csor.00g217320 vs. ExPASy Swiss-Prot
Match: Q9M0B9 (Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 7.8e-21
Identity = 70/149 (46.98%), Postives = 100/149 (67.11%), Query Frame = 0


Query: 2   TVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKES 61
           +V +RK+AIKLSAD+A+AS R   T WSRA+I  T+  D +FLV   + G      I   
Sbjct: 30  SVHERKKAIKLSADVAMASLRKGTTCWSRALIEKTATED-NFLVRQMLSGIKAETLI--- 89

Query: 62  SSKITRSSWSSRKILKRSRRVGRRK-KCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFM-D 121
           + K+ + +   RKI++RS+++ RRK K     A   AKRLV++RT+ LR +VPGGE M +
Sbjct: 90  NKKLPKKTVCHRKIVRRSKKILRRKSKSASEEAAAKAKRLVKRRTQGLRNVVPGGELMSN 149

Query: 122 EVSLIEETLDYILALQTQVDVMRCLATTA 149
           +V L++ETLDYI++LQTQV+VMR +   A
Sbjct: 150 DVLLLQETLDYIVSLQTQVNVMRSIVDAA 174

[Close]

BLAST of Csor.00g217320 vs. ExPASy Swiss-Prot
Match: O80482 (Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=1)

HSP 1 Score: 45.1 bits (105), Expect = 8.6e-04
Identity = 45/151 (29.80%), Postives = 67/151 (44.37%), Query Frame = 0


Query: 3   VADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKESS 62
           V+   R I+ +AD  LA+S    TRWSRA++A                 R   +  K   
Sbjct: 80  VSGAAREIRDTADRVLAASARGTTRWSRAILA----------------SRVRAKLKKHRK 139

Query: 63  SKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDEVS 122
           +K +  +  SRK L  + R+      + PA        V+++ + L  LVPG   +   +
Sbjct: 140 AKKSTGNCKSRKGLTETNRI------KLPA--------VERKLKILGRLVPGCRKVSVPN 199

Query: 123 LIEETLDYILALQTQVDVMRCLATTAYVAPP 154
           L++E  DYI AL+ QV  M  LA     A P
Sbjct: 200 LLDEATDYIAALEMQVRAMEALAELLTAAAP 200

[Close]

BLAST of Csor.00g217320 vs. NCBI nr
Match: KAG6589740.1 (Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293 bits (749), Expect = 1.49e-99
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE
Sbjct: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60

Query: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120
           SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE
Sbjct: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120

Query: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155
           VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL
Sbjct: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155

[Close]

BLAST of Csor.00g217320 vs. NCBI nr
Match: XP_022921880.1 (transcription factor IBH1-like 1 [Cucurbita moschata])

HSP 1 Score: 293 bits (749), Expect = 3.90e-99
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE
Sbjct: 29  MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 88

Query: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120
           SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE
Sbjct: 89  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 148

Query: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155
           VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL
Sbjct: 149 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 183

[Close]

BLAST of Csor.00g217320 vs. NCBI nr
Match: KAG7023415.1 (Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293 bits (749), Expect = 5.14e-99
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE
Sbjct: 37  MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 96

Query: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120
           SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE
Sbjct: 97  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 156

Query: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155
           VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL
Sbjct: 157 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 191

[Close]

BLAST of Csor.00g217320 vs. NCBI nr
Match: XP_022988593.1 (transcription factor IBH1-like 1 [Cucurbita maxima])

HSP 1 Score: 286 bits (733), Expect = 1.07e-96
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANG+LGRAVCERIK+
Sbjct: 29  MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGLLGRAVCERIKQ 88

Query: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120
           SSSKITRSSWSS KILKRSRRVGRRKKCRKPAAEWIA+RLVQKRTRTLRGLVPGGEFMDE
Sbjct: 89  SSSKITRSSWSSGKILKRSRRVGRRKKCRKPAAEWIARRLVQKRTRTLRGLVPGGEFMDE 148

Query: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155
           VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL
Sbjct: 149 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 183

[Close]

BLAST of Csor.00g217320 vs. NCBI nr
Match: XP_023515816.1 (transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 281 bits (719), Expect = 1.46e-94
Identity = 150/155 (96.77%), Postives = 150/155 (96.77%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE
Sbjct: 29  MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 88

Query: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120
           SSSKITRSSW S KILKRSRRVGRRKKCRK  AEWIAKRLVQKRTR LRGLVPGGEFMDE
Sbjct: 89  SSSKITRSSWCSGKILKRSRRVGRRKKCRKAGAEWIAKRLVQKRTRMLRGLVPGGEFMDE 148

Query: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155
           VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL
Sbjct: 149 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 183

[Close]

BLAST of Csor.00g217320 vs. ExPASy TrEMBL
Match: A0A6J1E715 (transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111430013 PE=4 SV=1)

HSP 1 Score: 293 bits (749), Expect = 1.89e-99
Identity = 155/155 (100.00%), Postives = 155/155 (100.00%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE
Sbjct: 29  MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 88

Query: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120
           SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE
Sbjct: 89  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 148

Query: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155
           VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL
Sbjct: 149 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 183

[Close]

BLAST of Csor.00g217320 vs. ExPASy TrEMBL
Match: A0A6J1JMR3 (transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111485792 PE=4 SV=1)

HSP 1 Score: 286 bits (733), Expect = 5.19e-97
Identity = 151/155 (97.42%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANG+LGRAVCERIK+
Sbjct: 29  MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGLLGRAVCERIKQ 88

Query: 61  SSSKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDE 120
           SSSKITRSSWSS KILKRSRRVGRRKKCRKPAAEWIA+RLVQKRTRTLRGLVPGGEFMDE
Sbjct: 89  SSSKITRSSWSSGKILKRSRRVGRRKKCRKPAAEWIARRLVQKRTRTLRGLVPGGEFMDE 148

Query: 121 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 155
           VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL
Sbjct: 149 VSLIEETLDYILALQTQVDVMRCLATTAYVAPPSL 183

[Close]

BLAST of Csor.00g217320 vs. ExPASy TrEMBL
Match: A0A5A7SVT7 (Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold57G002130 PE=4 SV=1)

HSP 1 Score: 194 bits (494), Expect = 5.45e-61
Identity = 112/149 (75.17%), Postives = 128/149 (85.91%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVA+RK AIKLSADIALASSRNCATRWSRAVIA +SV + S LVANGVLGR +CER+K+
Sbjct: 1   MTVAERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 61  SSS-KITRSSWSSRKILKRSRRVGRRKKCRKP--AAEWIAKRLVQKRTRTLRGLVPGGEF 120
            S+ KITRSSWSS KI+KRSRRV RR++ R    AA  IA+RLVQ+RT+ LRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQRRTKVLRGLVPGGEF 120

Query: 121 MDEVSLIEETLDYILALQTQVDVMRCLAT 146
           MDE+SLIEETLDY+ ALQ QVDVMR LA+
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLAS 149

[Close]

BLAST of Csor.00g217320 vs. ExPASy TrEMBL
Match: A0A5D3BAB1 (Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold271G00110 PE=4 SV=1)

HSP 1 Score: 194 bits (493), Expect = 7.73e-61
Identity = 112/149 (75.17%), Postives = 127/149 (85.23%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTV +RK AIKLSADIALASSRNCATRWSRAVIA +SV + S LVANGVLGR +CER+K+
Sbjct: 1   MTVTERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 60

Query: 61  SSS-KITRSSWSSRKILKRSRRVGRRKKCRKP--AAEWIAKRLVQKRTRTLRGLVPGGEF 120
            S+ KITRSSWSS KI+KRSRRV RR++ R    AA  IA+RLVQKRT+ LRGLVPGGEF
Sbjct: 61  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQKRTKVLRGLVPGGEF 120

Query: 121 MDEVSLIEETLDYILALQTQVDVMRCLAT 146
           MDE+SLIEETLDY+ ALQ QVDVMR LA+
Sbjct: 121 MDEISLIEETLDYMSALQAQVDVMRFLAS 149

[Close]

BLAST of Csor.00g217320 vs. ExPASy TrEMBL
Match: A0A1S3B8V1 (uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=4 SV=1)

HSP 1 Score: 194 bits (494), Expect = 1.34e-60
Identity = 112/149 (75.17%), Postives = 128/149 (85.91%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           MTVA+RK AIKLSADIALASSRNCATRWSRAVIA +SV + S LVANGVLGR +CER+K+
Sbjct: 29  MTVAERKTAIKLSADIALASSRNCATRWSRAVIARSSVDNRSCLVANGVLGRGLCERVKQ 88

Query: 61  SSS-KITRSSWSSRKILKRSRRVGRRKKCRKP--AAEWIAKRLVQKRTRTLRGLVPGGEF 120
            S+ KITRSSWSS KI+KRSRRV RR++ R    AA  IA+RLVQ+RT+ LRGLVPGGEF
Sbjct: 89  ISNLKITRSSWSSGKIVKRSRRVWRRRRRRNKCMAAVTIARRLVQRRTKVLRGLVPGGEF 148

Query: 121 MDEVSLIEETLDYILALQTQVDVMRCLAT 146
           MDE+SLIEETLDY+ ALQ QVDVMR LA+
Sbjct: 149 MDEISLIEETLDYMSALQAQVDVMRFLAS 177

[Close]

BLAST of Csor.00g217320 vs. TAIR 10
Match: AT4G30410.2 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 101.7 bits (252), Expect = 5.5e-22
Identity = 70/149 (46.98%), Postives = 100/149 (67.11%), Query Frame = 0


Query: 2   TVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKES 61
           +V +RK+AIKLSAD+A+AS R   T WSRA+I  T+  D +FLV   + G      I   
Sbjct: 30  SVHERKKAIKLSADVAMASLRKGTTCWSRALIEKTATED-NFLVRQMLSGIKAETLI--- 89

Query: 62  SSKITRSSWSSRKILKRSRRVGRRK-KCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFM-D 121
           + K+ + +   RKI++RS+++ RRK K     A   AKRLV++RT+ LR +VPGGE M +
Sbjct: 90  NKKLPKKTVCHRKIVRRSKKILRRKSKSASEEAAAKAKRLVKRRTQGLRNVVPGGELMSN 149

Query: 122 EVSLIEETLDYILALQTQVDVMRCLATTA 149
           +V L++ETLDYI++LQTQV+VMR +   A
Sbjct: 150 DVLLLQETLDYIVSLQTQVNVMRSIVDAA 174

[Close]

BLAST of Csor.00g217320 vs. TAIR 10
Match: AT4G30410.1 (sequence-specific DNA binding transcription factors )

HSP 1 Score: 101.7 bits (252), Expect = 5.5e-22
Identity = 70/149 (46.98%), Postives = 100/149 (67.11%), Query Frame = 0


Query: 2   TVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKES 61
           +V +RK+AIKLSAD+A+AS R   T WSRA+I  T+  D +FLV   + G      I   
Sbjct: 30  SVHERKKAIKLSADVAMASLRKGTTCWSRALIEKTATED-NFLVRQMLSGIKAETLI--- 89

Query: 62  SSKITRSSWSSRKILKRSRRVGRRK-KCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFM-D 121
           + K+ + +   RKI++RS+++ RRK K     A   AKRLV++RT+ LR +VPGGE M +
Sbjct: 90  NKKLPKKTVCHRKIVRRSKKILRRKSKSASEEAAAKAKRLVKRRTQGLRNVVPGGELMSN 149

Query: 122 EVSLIEETLDYILALQTQVDVMRCLATTA 149
           +V L++ETLDYI++LQTQV+VMR +   A
Sbjct: 150 DVLLLQETLDYIVSLQTQVNVMRSIVDAA 174

[Close]

BLAST of Csor.00g217320 vs. TAIR 10
Match: AT5G57780.1 (EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 76.6 bits (187), Expect = 1.9e-14
Identity = 57/147 (38.78%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 1   MTVADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKE 60
           + V +RK AI+LS+D+A+A++RN +T WSRA+I+                          
Sbjct: 31  LNVTERKNAIRLSSDLAMAAARNGSTVWSRALIS-------------------------- 90

Query: 61  SSSKITRSSWSSRKILKRSR-RVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMD 120
            S   T +   +R+ILK++R R+  R    +    + AK  V+KRT  L+ LVPGGE +D
Sbjct: 91  RSGNKTANKPMARRILKKARNRMKNRCNILRRNGNFTAKTWVRKRTDLLKSLVPGGELID 150

Query: 121 EVS-LIEETLDYILALQTQVDVMRCLA 146
           +   LI ETLDYI+ L+ QVDVMR +A
Sbjct: 151 DKDYLIRETLDYIVYLRAQVDVMRTVA 151

[Close]

BLAST of Csor.00g217320 vs. TAIR 10
Match: AT1G09250.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 45.1 bits (105), Expect = 6.1e-05
Identity = 45/151 (29.80%), Postives = 67/151 (44.37%), Query Frame = 0


Query: 3   VADRKRAIKLSADIALASSRNCATRWSRAVIAGTSVHDGSFLVANGVLGRAVCERIKESS 62
           V+   R I+ +AD  LA+S    TRWSRA++A                 R   +  K   
Sbjct: 80  VSGAAREIRDTADRVLAASARGTTRWSRAILA----------------SRVRAKLKKHRK 139

Query: 63  SKITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDEVS 122
           +K +  +  SRK L  + R+      + PA        V+++ + L  LVPG   +   +
Sbjct: 140 AKKSTGNCKSRKGLTETNRI------KLPA--------VERKLKILGRLVPGCRKVSVPN 199

Query: 123 LIEETLDYILALQTQVDVMRCLATTAYVAPP 154
           L++E  DYI AL+ QV  M  LA     A P
Sbjct: 200 LLDEATDYIAALEMQVRAMEALAELLTAAAP 200

[Close]

BLAST of Csor.00g217320 vs. TAIR 10
Match: AT2G43060.1 (ILI1 binding bHLH 1 )

HSP 1 Score: 44.7 bits (104), Expect = 8.0e-05
Identity = 45/140 (32.14%), Postives = 62/140 (44.29%), Query Frame = 0


Query: 6   RKRAIKLSADIALASSRNCATR-WSRAVIAGTSVHDGSFLVANGVLGRAVCERIKESSSK 65
           R R IK +A +++A +   ++R WSRA++                       R  +  +K
Sbjct: 44  RVRKIKKAAYVSMARAAGGSSRLWSRALL----------------------RRADKDDNK 103

Query: 66  ITRSSWSSRKILKRSRRVGRRKKCRKPAAEWIAKRLVQKRTRTLRGLVPGGEFMDEVSLI 125
           I R S    KI  + RR  +R    + AAE             LR LVPGG  M+   L+
Sbjct: 104 IVRFSRRKWKISSKRRRSNQRAPVVEEAAE------------RLRNLVPGGGGMETSKLM 149

Query: 126 EETLDYILALQTQVDVMRCL 145
           EET  YI  L  QV VM+CL
Sbjct: 164 EETAHYIKCLSMQVKVMQCL 149

The following BLAST results are available for this feature:

BLAST of Csor.00g217320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M0B9	7.8e-21	46.98	Transcription factor IBH1-like 1 OS=Arabidopsis thaliana OX=3702 GN=IBL1 PE=1 SV...	[more]
O80482	8.6e-04	29.80	Transcription factor bHLH149 OS=Arabidopsis thaliana OX=3702 GN=BHLH149 PE=1 SV=...	[more]

BLAST of Csor.00g217320 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589740.1	1.49e-99	100.00	Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. sororia...	[more]
XP_022921880.1	3.90e-99	100.00	transcription factor IBH1-like 1 [Cucurbita moschata]	[more]
KAG7023415.1	5.14e-99	100.00	Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022988593.1	1.07e-96	97.42	transcription factor IBH1-like 1 [Cucurbita maxima]	[more]
XP_023515816.1	1.46e-94	96.77	transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g217320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E715	1.89e-99	100.00	transcription factor IBH1-like 1 OS=Cucurbita moschata OX=3662 GN=LOC111430013 P...	[more]
A0A6J1JMR3	5.19e-97	97.42	transcription factor IBH1-like 1 OS=Cucurbita maxima OX=3661 GN=LOC111485792 PE=...	[more]
A0A5A7SVT7	5.45e-61	75.17	Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A5D3BAB1	7.73e-61	75.17	Transcription factor IBH1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B8V1	1.34e-60	75.17	uncharacterized protein LOC103487305 OS=Cucumis melo OX=3656 GN=LOC103487305 PE=...	[more]

BLAST of Csor.00g217320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G30410.2	5.5e-22	46.98	sequence-specific DNA binding transcription factors	[more]
AT4G30410.1	5.5e-22	46.98	sequence-specific DNA binding transcription factors	[more]
AT5G57780.1	1.9e-14	38.78	EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arab...	[more]
AT1G09250.1	6.1e-05	29.80	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G43060.1	8.0e-05	32.14	ILI1 binding bHLH 1	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044660	Transcription factor IBH1-like	PANTHER	PTHR33124	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 1..147
None	No IPR available	PANTHER	PTHR33124:SF5	TRANSCRIPTION FACTOR IBH1-LIKE 1	coord: 1..147
IPR044549	Transcription factor IBH1-like, bHLH domain	CDD	cd11444	bHLH_AtIBH1_like	coord: 98..145 e-value: 1.75043E-13 score: 59.5584
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 103..147

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g217320.m01	Csor.00g217320.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000976	transcription cis-regulatory region binding