Csor.00g216090 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g216090
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Amino-acid racemase isoform 2
Location	Csor_Chr10: 2704852 .. 2709314 (+)
RNA-Seq Expression	Csor.00g216090
Synteny	Csor.00g216090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTTGATGGTGGTATGGCTATGTCATTTTGTGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCATTTTTCGGTTTAGAAGGAGATTAAACCTGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCGGGAAAATCTCTGTCGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAACACTGTGGGTGTCATAGGGGGAGTGTCAGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCGTGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGTCGGAGCTCGATGCCTAATTACACCTTGCCATCTTTCACATAGGTGGCTTGGTGACACATCTGAGAGCTGCAAATTACCTTTCCTTCACGTCGGAGATTGTGTAGCTAGGGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGTCCGGATTGGCCTGCTTGCAACTGATACAGCAACACTAACTGGTTTATACCACGAGAGGCTACAAAAGCAGGTTTTGTAAATACATTCACTGCTCATGGCTGATACTCTAGTTTTTACCACGAGAGGCTCGATCCCTTCTCTAAAGTTCTCGAATAAAGTACACCATTTGTTCGACACTTGAGTCACTTTTGAATACACCTTCGAGGTTAAGGGCATGGTCTTGACATCATGTTATGAATCATGACTCTCCACAATGGTATAATATTGTCGGCTTTGAGTATAAGCTCTCATGGGTTTGCTTTGGACTTTCCCAAAAGGCCTCATACCAATGGAGGTGTCGTCGTGTGGGACTCTGTGATGTCCCACATTGGTTGGGAAGGAGAACAAATCACCTTTTTATAAGGGTGTGGAAACCTTCCCCTAGTAGTCCGTTTTAAAGCCTTGAGTGGAAACCTGAAAGGGAAAGCCTAAAGAGGATAATATCTATTAGCGGTAGATTTGGGTCGTTACGAATGGTATCAGAGCCAGACACTGAACGATGTGTCAGCCTTCTCGTTGTTACCTGAAGGGGGGTAGACACGAGGCAGTGTGCCAGTAAGGACGCTGGGCCCCAAAGGGGGTGGATTTGATGGTGGTCCCACGTTGATTGGAGAAAGGAACGAGTGCCAGCGATGACGCTGAGTCCTAAAAGGGGGGTGGATTTTGATGTCCCACGTTGGTTGGGGAGGAGAACAAATCACCCTTTATAAGGGTGTGGAAACCTTCCCCTAGTAGACGCGTTTTGAAGCCTTGAGGGGAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATTTCTACTAGCGGTGGATCTGGATCGTTACAGACTCCCTCCCAACAATCCTCAACATTTTTCTACACTATTTACTAAACGATCCCTAACATTTCTTCTGAATTCCTCGTGTTCTTTCAGGGCTTCGATGTCGTCGTGCCGGACGAGGCAACCATGGAGCATATAGTAATACCTGCGGTGGAAGCTTTCCATAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGGTGTTCATGTTCTATTGACAAGGGCTGTGAATATGGTAATCCTTGCTTCTGATGAACTCCTTAATCTTCTTCCTCCAGATGACCCCATTCTGGAAAAATGCATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCAAAATCTGCAGGACATCTCCATGAGAAAGCTCAGCGTTGCCTCTCTCGCTCACAAGCTCTACACTTTATGTGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAACTCTTGCTTTGGGTTTCACTGAAAGGTCTCATACCAATGAGATAATTAGCCAATGTGGGACCCACTCCAAATAATCCTCGACAATGTGTTCGTTAATAAGAAGATTGGAGGCATGAAGGATGAAATATAAACAGGAACCAAGAAAGACCACAGCATCAAGCTCTCTTTAGAAGAACATGGAAGCCAGTCCACTGTCTAAATTATCATATTTATTTTATTTTTTTCTCTTAATATTTTATATAATTAGATTTGTAAAAAAAAAAAAAAAAAAAAAAATCTATTTTTCAAATAATTTAGAAAATATGGTGATAAGGACTGAAATGAAATATTTAGAGGAAAAGAAATAAAGTTCTGAAAATAAAATGAAATAAAGCTTAAATTTATTTATAATGTTTGGATTTTTTTTTTTCACATTTTTTTCAGTTTAAACTTAGTCGAAATAATATTTAGTGAATTGGCGAAAATGTAAAGAATAAATTTAAAAAAATGTTAAAAGGGACTAGATTGAAATTTTCTAAATAATAAGGACTAGGTTGCAAAAGTATTTATTTAATTGAATAAAAATGTTGGGTTTAATGAATATCTAAAAGTTATTATTATTATTATTATTTTGTAAAAAAAAAAAAAACAGCTTAGACAGAAAATGGACTCTGCTGAGCGGATTGGAAAGGTCATGTTTCTCGATATCTTTGAAGAGTGGAACTTTGTTCATCACGAATCGTCGGTTGAGTTTAATTTCGTTTGCTTTGATAATTTTTTTTTACTATCTGCTCTGACTCTGAATTCCATCCCGTTCTTGTATTTTACAGATGATGAATCTTGTTTCCGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATGTAAGAGACGATTCAAATTCATAAAAACTACCGCCATTCAAACTAAGTACATTTAGAACTTGTTCTTGATATGATTTTCGATTTCGTAAAAGTTTTGCAACGAACCTTTTTTCTTTTTTGAAATGTGTAGAGATGGTGTTGGTAGCTATGTGTATTTTGGATCTGTTCTTGTACAAGTTCAGGTGAGGAATTTTCTATGATAGGTTAATTGGAATCCCCAAAGTAAATAGCCTAATTAGATAATGAAGGCGAATTATGCTATATAATTCACCTGCAAAGGTTCTCTAGAGATTCGAGTTTTTTCTAGGGGACACCAAATCTTCTTTACAGCCACTGATGAAAGTTGGGTTTGACTCGCAATTTGAGCCTAATAATGTTATTAGAAGGGCGTTTTCATTAATGTCCGTTGAAGTGGGGCATCTGGTTCTTATCTATTTTTATACATAAGAATTTATTTCTTTGAGATTTGATGGTTGAAGAACCATAAATTATTGAGCTGAAAGTTGAGTCTATCTTATTAGGAGCTTGCTATTCACACAGATTCTGAATCTTAATCAATACCCCACCCTCTCAACCTTCCCCCTGGTTCAATCTCAAAGCTTCTATATGCTGACATAATAGTTTCCATTTCAATTTGATTCTGTGTTTAAAGCAACCATTGACATTCCAAACAGTATTTGGATATGTTTGTTCTTGTTTTGCGCATCCATTAGATAGAGAGAGAGAGAGAGAGAGAGAGAGTATCAAGCTATGTTGCAATGCTAAAGAGGGGAAAATGGGCCTCCACCCATGATATCTATATTGAGGAGCATTCTAAGGGCTTAACATTATTGTTGTTAGTCATTACAAAAAGAAAAAGGAAAACAAAAGGCAGCATTTGGATAGGGATCGGATGCCAAGAAGACGATATAATCGCATAAGGAGAGCCTTCCAAAATTCCTTCCCGCTTTAAACTGCACCACCTAAAAGATAGAGCACCCAAAATTGAATCACACCCAAGTGACACACGGTAAATTAAACACTTTTTGAGGGGCAGTAGATAACAAAAAGGTGCAAATTATGTTCTTCATTGATATAAACTCACCGAAACCTCTTGGTGTTTTGCATTTAAAACACTCCATCCTGCTTGCATAATTATGTATTCCGCATCCAATTCTGTACAACACAACATTATATGTTTTTTTTCTTTCAGTTCAACATTACATGTTAATTAAACACATTGAATACTGGTGCGAGTTTAAACAACATCAACCAATTTTATTGTTCGTTTTCAGCGTGATCTTTTGAGTAAGGAATTTGAAATTCTGTCGCTGAAAGTAATGCAGGTGTGAATTATATTTCCATTTGAATGGCTTTACTGTTTTGATAAACTTTTATTGTATAGTTTATTGTTGTGTATGTACCTAGGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTGTAAGTTGA

mRNA sequence

ATGATGCTTGATGGTGGTATGGCTATGTCATTTTGTGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCATTTTTCGGTTTAGAAGGAGATTAAACCTGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCGGGAAAATCTCTGTCGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAACACTGTGGGTGTCATAGGGGGAGTGTCAGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCGTGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGTCCGGATTGGCCTGCTTGCAACTGATACAGCAACACTAACTGGTTTATACCACGAGAGGCTACAAAAGCAGGGCTTCGATGTCGTCGTGCCGGACGAGGCAACCATGGAGCATATAGTAATACCTGCGGTGGAAGCTTTCCATAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGGTGTTCATGTTCTATTGACAAGGGCTGTGAATATGGTAATCCTTGCTTCTGATGAACTCCTTAATCTTCTTCCTCCAGATGACCCCATTCTGGAAAAATGCATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCAAAATCTGCAGGACATCTCCATGAGAAAGCTCAGCATGATGAATCTTGTTTCCGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTGTAAGTTGA

Coding sequence (CDS)

ATGATGCTTGATGGTGGTATGGCTATGTCATTTTGTGCATTGAATTGCCCAGCAGGTGTTCGACGAAATGCCAATGAGAGCATTTTTCGGTTTAGAAGGAGATTAAACCTGTATTTATCTGTACAGATCTTCTCTGTTATTCAAACTGATGAGAATGACAACTTAGCAGCATCCAAGAAGATGTCGAGTTCGGGAAAATCTCTGTCGAAAACTCGAACTCTTAAGCCCCTTCTTGTCCAGCCAAACACTGTGGGTGTCATAGGGGGAGTGTCAGTTTTTTCCACTCTACTTTTCATGGAAAAGCTCGTTTGGTGGAGTAGGAAGGATGGAGAAGAGAGCATACCTTTTGTTGTCTGCAGCGATCCAGTATTAGACAAGGGAATTCCTCATAGTGATGCCGTGATCATCGAGAATTTGAAGCAGAAAACGGCGTTTCTCGAGCAGGAGCTTAATGAGGCTAAGCTTAAGCAACTTGAAGCAGGTAGCAATGTCCGGATTGGCCTGCTTGCAACTGATACAGCAACACTAACTGGTTTATACCACGAGAGGCTACAAAAGCAGGGCTTCGATGTCGTCGTGCCGGACGAGGCAACCATGGAGCATATAGTAATACCTGCGGTGGAAGCTTTCCATAAAAGGGATCATGAAGGAGCAAGAAATCTGTTGAGAATTGGTGTTCATGTTCTATTGACAAGGGCTGTGAATATGGTAATCCTTGCTTCTGATGAACTCCTTAATCTTCTTCCTCCAGATGACCCCATTCTGGAAAAATGCATTGACCCCATGGATGCGTTGGCCAGAGCAGCCATTAAATGGTCAAAATCTGCAGGACATCTCCATGAGAAAGCTCAGCATGATGAATCTTGTTTCCGAGGCGATGGAGGCGACTCTCGCTTTTCCACTGAGATTGAAGGTGTTGCGACGAAAATCGAAAGCGGGAAAGTAATGGCAAACCCAGTCTCCAGATTTCCATCCAGGTGGGATGCTTGCATCAGATCCATACTGATCGGAACCCATCATGTAGGCGCCATAATCACCAGGATAGACGGACTTAAATGCACCACATCTAAAGCAGTTCGGGCGGCTGGCGTAATTGTGAGCTCCGCAGCTGACGGCAGTGCAGTACCAGTCTCCGGCCAACACCTCCGTCTTGTTGTAACTGTAAGTTGA

Protein sequence

MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKMSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSDPVLDKGIPHSDAVIIENLKQKTAFLEQELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIVIPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDALARAAIKWSKSAGHLHEKAQHDESCFRGDGGDSRFSTEIEGVATKIESGKVMANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVRAAGVIVSSAADGSAVPVSGQHLRLVVTVS

Homology

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BLAST of Csor.00g216090 vs. NCBI nr
Match: KAG6589863.1 (hypothetical protein SDJN03_15286, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 765 bits (1976), Expect = 8.99e-279
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0


Query: 1   MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60
           MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK
Sbjct: 1   MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60

Query: 61  MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120
           MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS
Sbjct: 61  MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120

Query: 121 DPVLDKGIPHSDAVIIENLKQKTAFLEQELNEAKLKQLEAGSNVRIGLLATDTATLTGLY 180
           DPVLDKGIPHSDAVIIENLKQKTAFLEQELNEAKLKQLEAGSNVRIGLLATDTATLTGLY
Sbjct: 121 DPVLDKGIPHSDAVIIENLKQKTAFLEQELNEAKLKQLEAGSNVRIGLLATDTATLTGLY 180

Query: 181 HERLQKQGFDVVVPDEATMEHIVIPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILA 240
           HERLQKQGFDVVVPDEATMEHIVIPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILA
Sbjct: 181 HERLQKQGFDVVVPDEATMEHIVIPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILA 240

Query: 241 SDELLNLLPPDDPILEKCIDPMDALARAAIKWSKSAGHLHEKAQHDESCFRGDGGDSRFS 300
           SDELLNLLPPDDPILEKCIDPMDALARAAIKWSKSAGHLHEKAQHDESCFRGDGGDSRFS
Sbjct: 241 SDELLNLLPPDDPILEKCIDPMDALARAAIKWSKSAGHLHEKAQHDESCFRGDGGDSRFS 300

Query: 301 TEIEGVATKIESGKVMANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVR 360
           TEIEGVATKIESGKVMANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVR
Sbjct: 301 TEIEGVATKIESGKVMANPVSRFPSRWDACIRSILIGTHHVGAIITRIDGLKCTTSKAVR 360

Query: 361 AAGVIVSSAADGSAVPVSGQHLRLVVTVS 389
           AAGVIVSSAADGSAVPVSGQHLRLVVTVS
Sbjct: 361 AAGVIVSSAADGSAVPVSGQHLRLVVTVS 389

[Close]

BLAST of Csor.00g216090 vs. NCBI nr
Match: XP_022961059.1 (uncharacterized protein LOC111461681 [Cucurbita moschata])

HSP 1 Score: 528 bits (1360), Expect = 4.53e-186
Identity = 275/319 (86.21%), Postives = 279/319 (87.46%), Query Frame = 0


Query: 2   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 61
           MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM
Sbjct: 1   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 60

Query: 62  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 121
           SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD
Sbjct: 61  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 120

Query: 122 PVLDKGIPHSDAVIIENLKQKTAFLEQ--------------------------------- 181
           PVLDKGIPHSDA+IIENLKQKTAFLEQ                                 
Sbjct: 121 PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGD 180

Query: 182 ----ELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIVI 241
               ELNEAKLKQLEAGSNVRIGLLATDT+TLTG YHERLQKQGFDVVVPDEATMEHIVI
Sbjct: 181 CVARELNEAKLKQLEAGSNVRIGLLATDTSTLTGFYHERLQKQGFDVVVPDEATMEHIVI 240

Query: 242 PAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDA 283
            AVEAFHKRDHEGARNLLRI VHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDA
Sbjct: 241 SAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDA 300

[Close]

BLAST of Csor.00g216090 vs. NCBI nr
Match: KAG7023535.1 (hypothetical protein SDJN02_14561, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 526 bits (1356), Expect = 9.88e-186
Identity = 272/296 (91.89%), Postives = 274/296 (92.57%), Query Frame = 0


Query: 1   MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60
           MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK
Sbjct: 1   MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60

Query: 61  MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120
           MSSSGKSLSKTRTLKPLLVQPNT+GVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFV+CS
Sbjct: 61  MSSSGKSLSKTRTLKPLLVQPNTLGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVICS 120

Query: 121 DPVLDKGIPHSDAVIIENLKQKTAFLEQ----------------------ELNEAKLKQL 180
           DPVLDKGIPHSDAVIIENLKQKTAFLEQ                      ELNEAKLKQL
Sbjct: 121 DPVLDKGIPHSDAVIIENLKQKTAFLEQWLGDTSESCKLPFLHVGDCVARELNEAKLKQL 180

Query: 181 EAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIVIPAVEAFHKRDHEGA 240
           EAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIVIPAVEAFHKRDHEGA
Sbjct: 181 EAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIVIPAVEAFHKRDHEGA 240

Query: 241 RNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDALARAAIKWSK 274
           RNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDALARAAIKWSK
Sbjct: 241 RNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDALARAAIKWSK 296

[Close]

BLAST of Csor.00g216090 vs. NCBI nr
Match: XP_023516201.1 (uncharacterized protein LOC111780131 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 523 bits (1347), Expect = 4.47e-184
Identity = 274/320 (85.62%), Postives = 279/320 (87.19%), Query Frame = 0


Query: 1   MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60
           MMLDGGMAMSF ALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK
Sbjct: 1   MMLDGGMAMSFYALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60

Query: 61  MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120
           MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS
Sbjct: 61  MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120

Query: 121 DPVLDKGIPHSDAVIIENLKQKTAFLEQ-------------------------------- 180
           DPVLDKGIPHSDA+IIENLKQKTAFLEQ                                
Sbjct: 121 DPVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVG 180

Query: 181 -----ELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIV 240
                ELN+AKLKQLEAGSNVRIGLLATDTATLTG YHERLQKQGFDVVVPDEATMEHIV
Sbjct: 181 DCVARELNKAKLKQLEAGSNVRIGLLATDTATLTGFYHERLQKQGFDVVVPDEATMEHIV 240

Query: 241 IPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMD 283
           IPAVEAFHKRDHEGARNLLRI VHVLLTRAVNMVILASDELLNLLPPDDPIL+KCIDPMD
Sbjct: 241 IPAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMVILASDELLNLLPPDDPILKKCIDPMD 300

[Close]

BLAST of Csor.00g216090 vs. NCBI nr
Match: XP_022987789.1 (uncharacterized protein LOC111485232 isoform X1 [Cucurbita maxima])

HSP 1 Score: 523 bits (1346), Expect = 6.35e-184
Identity = 273/320 (85.31%), Postives = 278/320 (86.88%), Query Frame = 0


Query: 1   MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60
           MMLDGGMAMSF ALNCPAGVRRNANES+FRFRRRLN YLSVQIFSVIQTDENDNLAASKK
Sbjct: 1   MMLDGGMAMSFYALNCPAGVRRNANESVFRFRRRLNQYLSVQIFSVIQTDENDNLAASKK 60

Query: 61  MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120
           MSSSGKSL KTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS
Sbjct: 61  MSSSGKSLLKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120

Query: 121 DPVLDKGIPHSDAVIIENLKQKTAFLEQ-------------------------------- 180
           DPVLDKGIPHSDA+IIENLKQKTAFLEQ                                
Sbjct: 121 DPVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESSKLPFLHVG 180

Query: 181 -----ELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIV 240
                ELNEAKLKQLEAGSNVRIGLLATDTATLTG YHERLQKQGFDVVVPD+ATMEHIV
Sbjct: 181 DCVASELNEAKLKQLEAGSNVRIGLLATDTATLTGFYHERLQKQGFDVVVPDKATMEHIV 240

Query: 241 IPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMD 283
           IPAVEAFHKRDHEGARNLLRI VHVLLTRAVNMVILASDELLNLLPPDDPIL+KCIDPMD
Sbjct: 241 IPAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMVILASDELLNLLPPDDPILKKCIDPMD 300

[Close]

BLAST of Csor.00g216090 vs. ExPASy TrEMBL
Match: A0A6J1HCW6 (uncharacterized protein LOC111461681 OS=Cucurbita moschata OX=3662 GN=LOC111461681 PE=4 SV=1)

HSP 1 Score: 528 bits (1360), Expect = 2.19e-186
Identity = 275/319 (86.21%), Postives = 279/319 (87.46%), Query Frame = 0


Query: 2   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 61
           MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM
Sbjct: 1   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 60

Query: 62  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 121
           SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD
Sbjct: 61  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 120

Query: 122 PVLDKGIPHSDAVIIENLKQKTAFLEQ--------------------------------- 181
           PVLDKGIPHSDA+IIENLKQKTAFLEQ                                 
Sbjct: 121 PVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESCKLPFLHVGD 180

Query: 182 ----ELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIVI 241
               ELNEAKLKQLEAGSNVRIGLLATDT+TLTG YHERLQKQGFDVVVPDEATMEHIVI
Sbjct: 181 CVARELNEAKLKQLEAGSNVRIGLLATDTSTLTGFYHERLQKQGFDVVVPDEATMEHIVI 240

Query: 242 PAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDA 283
            AVEAFHKRDHEGARNLLRI VHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDA
Sbjct: 241 SAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDA 300

[Close]

BLAST of Csor.00g216090 vs. ExPASy TrEMBL
Match: A0A6J1JJU3 (uncharacterized protein LOC111485232 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111485232 PE=4 SV=1)

HSP 1 Score: 523 bits (1346), Expect = 3.07e-184
Identity = 273/320 (85.31%), Postives = 278/320 (86.88%), Query Frame = 0


Query: 1   MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60
           MMLDGGMAMSF ALNCPAGVRRNANES+FRFRRRLN YLSVQIFSVIQTDENDNLAASKK
Sbjct: 1   MMLDGGMAMSFYALNCPAGVRRNANESVFRFRRRLNQYLSVQIFSVIQTDENDNLAASKK 60

Query: 61  MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120
           MSSSGKSL KTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS
Sbjct: 61  MSSSGKSLLKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120

Query: 121 DPVLDKGIPHSDAVIIENLKQKTAFLEQ-------------------------------- 180
           DPVLDKGIPHSDA+IIENLKQKTAFLEQ                                
Sbjct: 121 DPVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESSKLPFLHVG 180

Query: 181 -----ELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIV 240
                ELNEAKLKQLEAGSNVRIGLLATDTATLTG YHERLQKQGFDVVVPD+ATMEHIV
Sbjct: 181 DCVASELNEAKLKQLEAGSNVRIGLLATDTATLTGFYHERLQKQGFDVVVPDKATMEHIV 240

Query: 241 IPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMD 283
           IPAVEAFHKRDHEGARNLLRI VHVLLTRAVNMVILASDELLNLLPPDDPIL+KCIDPMD
Sbjct: 241 IPAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMVILASDELLNLLPPDDPILKKCIDPMD 300

[Close]

BLAST of Csor.00g216090 vs. ExPASy TrEMBL
Match: A0A6J1JHU3 (uncharacterized protein LOC111485232 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111485232 PE=4 SV=1)

HSP 1 Score: 434 bits (1115), Expect = 1.94e-149
Identity = 229/279 (82.08%), Postives = 233/279 (83.51%), Query Frame = 0


Query: 1   MMLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKK 60
           MMLDGGMAMSF ALNCPAGVRRNANES+FRFRRRLN YLSVQIFSVIQTDENDNLAASKK
Sbjct: 1   MMLDGGMAMSFYALNCPAGVRRNANESVFRFRRRLNQYLSVQIFSVIQTDENDNLAASKK 60

Query: 61  MSSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120
           MSSSGKSL KTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS
Sbjct: 61  MSSSGKSLLKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCS 120

Query: 121 DPVLDKGIPHSDAVIIENLKQKTAFLEQ-------------------------------- 180
           DPVLDKGIPHSDA+IIENLKQKTAFLEQ                                
Sbjct: 121 DPVLDKGIPHSDAMIIENLKQKTAFLEQSGARCLITPCHLSHRWLGDTSESSKLPFLHVG 180

Query: 181 -----ELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIV 240
                ELNEAKLKQLEAGSNVRIGLLATDTATLTG YHERLQKQGFDVVVPD+ATMEHIV
Sbjct: 181 DCVASELNEAKLKQLEAGSNVRIGLLATDTATLTGFYHERLQKQGFDVVVPDKATMEHIV 240

Query: 241 IPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASD 242
           IPAVEAFHKRDHEGARNLLRI VHVLLTRAVNM +   D
Sbjct: 241 IPAVEAFHKRDHEGARNLLRIAVHVLLTRAVNMPLNGQD 279

[Close]

BLAST of Csor.00g216090 vs. ExPASy TrEMBL
Match: A0A6J1L4S4 (uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111499133 PE=4 SV=1)

HSP 1 Score: 422 bits (1086), Expect = 1.64e-144
Identity = 227/333 (68.17%), Postives = 250/333 (75.08%), Query Frame = 0


Query: 2   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 61
           MLDGGMAM F ALNCPA VRRNANESI RFRRRLN Y S+QIFSV+QTDENDNL  SKK+
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 62  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 121
           SS+GKS+SK R  KPLLVQPNTVGVIGGVSV STLLF+EKLVWWS KDG++SIPFVVCSD
Sbjct: 61  SSAGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 122 PVLDKGIP----------------HSDAVIIENLKQKTAFLEQ----------------- 181
           P L KGIP                 +DA IIE LKQK  FLEQ                 
Sbjct: 121 PALGKGIPPLTSLTTFTANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 182 ------------------ELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFD 241
                             EL EAKLK LEAGS+VRIGLLATD A +TG Y ERLQ QGF+
Sbjct: 181 GDTSCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFE 240

Query: 242 VVVPDEATMEHIVIPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPP 283
           VV+PDEAT++HI++PAVEA +KRD EGARNLLRI VH+LL RAVN+VILASDELLNLLPP
Sbjct: 241 VVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPP 300

[Close]

BLAST of Csor.00g216090 vs. ExPASy TrEMBL
Match: A0A6J1EU92 (uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111437803 PE=4 SV=1)

HSP 1 Score: 421 bits (1081), Expect = 9.42e-144
Identity = 226/333 (67.87%), Postives = 249/333 (74.77%), Query Frame = 0


Query: 2   MLDGGMAMSFCALNCPAGVRRNANESIFRFRRRLNLYLSVQIFSVIQTDENDNLAASKKM 61
           MLDGGMAM F ALNCPA VRRNANESI RFRRRLN Y S+QIFSV+QTDENDNL  SKK+
Sbjct: 1   MLDGGMAMPFYALNCPAPVRRNANESITRFRRRLNPYSSLQIFSVVQTDENDNLPVSKKI 60

Query: 62  SSSGKSLSKTRTLKPLLVQPNTVGVIGGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSD 121
           S+ GKS+SK R  KPLLVQPNTVGVIGGVSV STLLF+EKLVWWS KDG++SIPFVVCSD
Sbjct: 61  STPGKSVSKGRAPKPLLVQPNTVGVIGGVSVISTLLFLEKLVWWSLKDGQQSIPFVVCSD 120

Query: 122 PVLDKGIP----------------HSDAVIIENLKQKTAFLEQ----------------- 181
           P L KGIP                 +DA IIE LKQK  FLEQ                 
Sbjct: 121 PALGKGIPPLTSLTTFPANSSQHAQTDAPIIEILKQKCVFLEQSGARCLITPCHLSHRWL 180

Query: 182 ------------------ELNEAKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFD 241
                             EL EAKLK LEAGS+VRIGLLATD A +TG Y ERLQ QGF+
Sbjct: 181 SDTSCKLPFLHVGDCVAMELKEAKLKPLEAGSSVRIGLLATDAAIVTGFYRERLQNQGFE 240

Query: 242 VVVPDEATMEHIVIPAVEAFHKRDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPP 283
           VV+PDEAT++HI++PAVEA +KRD EGARNLLRI VH+LL RAVN+VILASDELLNLLPP
Sbjct: 241 VVLPDEATIKHILVPAVEALNKRDQEGARNLLRIAVHILLIRAVNIVILASDELLNLLPP 300

[Close]

BLAST of Csor.00g216090 vs. TAIR 10
Match: AT1G15410.1 (aspartate-glutamate racemase family )

HSP 1 Score: 221.5 bits (563), Expect = 1.2e-57
Identity = 129/303 (42.57%), Postives = 180/303 (59.41%), Query Frame = 0


Query: 32  RRRLNLYLSVQIFSV-IQTDENDNLAASKK---MSSSGKSLSKTRTLKPLLVQPNTVGVI 91
           R RL+  L++   SV +  DE+++L   KK   +S   ++   +     LL Q NTVG+I
Sbjct: 25  RVRLSRVLAMPPSSVLLHMDESNDLPKPKKGFCLSEDSRNSLNSLPADSLLRQANTVGII 84

Query: 92  GGVSVFSTLLFMEKLVWWSRKDGEESIPFVVCSDPVLDKGI------------------P 151
           GGVS  STL F++KLV WS  DG+ S+PFV+CSDP L+K +                  P
Sbjct: 85  GGVSTDSTLKFVKKLVDWSSNDGKSSLPFVLCSDPALNKELLLYEENSYPSLYHREESTP 144

Query: 152 HSDAVIIENLKQKTAFLE-------------------------------------QELNE 211
               +I+ENL+ K  +LE                                     +EL E
Sbjct: 145 VDPKLIVENLRNKRRYLERCGAKLILMPCHIAHIWYEEVCEGSLVPLLHMGECIAKELQE 204

Query: 212 AKLKQLEAGSNVRIGLLATDTATLTGLYHERLQKQGFDVVVPDEATMEHIVIPAVEAFHK 271
           AK+K LEAG+ +R+G++AT      G Y E+LQ  GF+ V+PD+ATMEH VIP++EA  +
Sbjct: 205 AKMKPLEAGNPLRVGVMATSATLSAGFYQEKLQSNGFEAVLPDKATMEHTVIPSIEAMKR 264

Query: 272 RDHEGARNLLRIGVHVLLTRAVNMVILASDELLNLLPPDDPILEKCIDPMDALARAAIKW 276
           +D EGARNLLRI + VLL +AVN+V+L SDE+ +LLP DDP+L+KC+DPMDALAR+AIKW
Sbjct: 265 KDMEGARNLLRIALQVLLVQAVNVVMLGSDEMRDLLPGDDPLLKKCVDPMDALARSAIKW 324

The following BLAST results are available for this feature:

BLAST of Csor.00g216090 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g216090 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6589863.1	8.99e-279	100.00	hypothetical protein SDJN03_15286, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022961059.1	4.53e-186	86.21	uncharacterized protein LOC111461681 [Cucurbita moschata]	[more]
KAG7023535.1	9.88e-186	91.89	hypothetical protein SDJN02_14561, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023516201.1	4.47e-184	85.63	uncharacterized protein LOC111780131 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022987789.1	6.35e-184	85.31	uncharacterized protein LOC111485232 isoform X1 [Cucurbita maxima]	[more]

BLAST of Csor.00g216090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HCW6	2.19e-186	86.21	uncharacterized protein LOC111461681 OS=Cucurbita moschata OX=3662 GN=LOC1114616...	[more]
A0A6J1JJU3	3.07e-184	85.31	uncharacterized protein LOC111485232 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JHU3	1.94e-149	82.08	uncharacterized protein LOC111485232 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1L4S4	1.64e-144	68.17	uncharacterized protein LOC111499133 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1EU92	9.42e-144	67.87	uncharacterized protein LOC111437803 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of Csor.00g216090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15410.1	1.2e-57	42.57	aspartate-glutamate racemase family	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..156
None	No IPR available	GENE3D	3.40.50.1860		coord: 153..261 e-value: 7.7E-19 score: 70.4
None	No IPR available	PANTHER	PTHR21198:SF9	ASPARTATE RACEMASE	coord: 2..144
None	No IPR available	PANTHER	PTHR21198	GLUTAMATE RACEMASE	coord: 2..144 coord: 148..279
None	No IPR available	PANTHER	PTHR21198:SF9	ASPARTATE RACEMASE	coord: 148..279
IPR015942	Asp/Glu/hydantoin racemase	PFAM	PF01177	Asp_Glu_race	coord: 153..269 e-value: 1.5E-10 score: 41.3
IPR001920	Asp/Glu racemase	SUPERFAMILY	53681	Aspartate/glutamate racemase	coord: 165..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g216090.m01	Csor.00g216090.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006807	nitrogen compound metabolic process
molecular_function	GO:0036361	racemase activity, acting on amino acids and derivatives
molecular_function	GO:0016855	racemase and epimerase activity, acting on amino acids and derivatives