Csor.00g215410 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g215410
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr10: 3048894 .. 3049588 (-)
RNA-Seq ExpressionCsor.00g215410
SyntenyCsor.00g215410
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAGACCGAGAGAAGTGAAGATGGTCCATCAACGCAGCATTCATGTAGGAGCCAGAGAACAATCGCTACCAGATAAGGATTTAAAGCAGCACCGTTCATTACCCTCACCATTATATTCATGGAATAGCTTCTTATCACACACTTCTCTCGCTATTTTCCTTTTGTTTCTCCCCATTTCCAACATTCCAAACCCGCAAATTTTGTTTTCTATTACTCTTTCTCAGGTACTCAATTCTGTACTCTGCTCAAATGCCTCACTGCTTTTCTCTGCCTTCCTTGATTTCTCATTCCTACAAATTATCACTTAAATTTGTATGCGTATTCCTGTTCTTTCTGTTTTTGAGTTCGTCTTAGGAAATTGAGTTCTAATGCTTATGGAAGTTTCTGTTGGGAATGTCCACTTCTTTGGTATTTATCTGCTACGAATTATTTCCAATTCTCAACTCTAATTACTCCTGTTGCTCAATCACAAGGATAATTATGTTAGCCTAACTTTGGCGAGCTTTAATCATTCTTAATTTTAACCTCTGCCAAGCCATTCTCTTATTAAATGAATTCTTGATTTAGCTTAGATGTTGAGTATTTATGTGTGTTAATATGCCTCTCTGAAATTTGATCGTGGAGAATTGTTGTGTGTAAATTGTGATGCTGTCAATGATGTTTGCAGGGGAAAACAAGGATGAAGAACTAA

mRNA sequence

ATGAACAGACCGAGAGAAGTGAAGATGGTCCATCAACGCAGCATTCATGTAGGAGCCAGAGAACAATCGCTACCAGATAAGGATTTAAAGCAGCACCGTTCATTACCCTCACCATTATATTCATGGAATAGCTTCTTATCACACACTTCTCTCGCTATTTTCCTTTTGTTTCTCCCCATTTCCAACATTCCAAACCCGCAAATTTTGTTTTCTATTACTCTTTCTCAGGGGAAAACAAGGATGAAGAACTAA

Coding sequence (CDS)

ATGAACAGACCGAGAGAAGTGAAGATGGTCCATCAACGCAGCATTCATGTAGGAGCCAGAGAACAATCGCTACCAGATAAGGATTTAAAGCAGCACCGTTCATTACCCTCACCATTATATTCATGGAATAGCTTCTTATCACACACTTCTCTCGCTATTTTCCTTTTGTTTCTCCCCATTTCCAACATTCCAAACCCGCAAATTTTGTTTTCTATTACTCTTTCTCAGGGGAAAACAAGGATGAAGAACTAA

Protein sequence

MNRPREVKMVHQRSIHVGAREQSLPDKDLKQHRSLPSPLYSWNSFLSHTSLAIFLLFLPISNIPNPQILFSITLSQGKTRMKN
Homology
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BLAST of Csor.00g215410 vs. NCBI nr
Match: KAG6589931.1 (hypothetical protein SDJN03_15354, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 164 bits (415), Expect = 6.52e-51
Identity = 83/83 (100.00%), Postives = 83/83 (100.00%), Query Frame = 0 

Query: 1  MNRPREVKMVHQRSIHVGAREQSLPDKDLKQHRSLPSPLYSWNSFLSHTSLAIFLLFLPI 60
          MNRPREVKMVHQRSIHVGAREQSLPDKDLKQHRSLPSPLYSWNSFLSHTSLAIFLLFLPI
Sbjct: 1  MNRPREVKMVHQRSIHVGAREQSLPDKDLKQHRSLPSPLYSWNSFLSHTSLAIFLLFLPI 60

Query: 61 SNIPNPQILFSITLSQGKTRMKN 83
          SNIPNPQILFSITLSQGKTRMKN
Sbjct: 61 SNIPNPQILFSITLSQGKTRMKN 83

The following BLAST results are available for this feature:
BLAST of Csor.00g215410 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g215410 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589931.16.52e-51100.00hypothetical protein SDJN03_15354, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g215410 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g215410 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g215410.m01Csor.00g215410.m01mRNA