Csor.00g215300 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g215300
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr10: 3089632 .. 3091562 (+)
RNA-Seq ExpressionCsor.00g215300
SyntenyCsor.00g215300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCGAGCTCAGCCCCCACCACATGTGTTCTGTAAAAGCCCTGCAATGATTGTTGCTTCAATCGCACAGAAATTGGCAGGCCAGCCCACCCACCCACTTTCCGCCATTACCGAACTCGTGAGATTGTCCTAATTTAGAATCCCTTTCTTTCCATTTTCTGGGTTCACTTTGTTTGTTTTCTCATTTTGTCATCATCCAGGCGAGATTCTCCTTCAAAAATTGTCAGACCTACTCTTTCACGATTAAAAAGTGCAGATTCTTGTGATCTTTCTTTCCTGATTTGAGTTATGATTATTATAAATCGCAACTTCATAATCGATGGGAAGAGATGTTTTTAGGAATCAAATTATGGTTGTTTCAAATCAATCCCGAGGAACTACGAACAACATTATAGCATTAAAAAGGTTAATGATCAAACAGGGGAATTCGGCTTGAATTAAGCTGTTACTGTAACTGGACCTAGTCTCGAAATTGGGCTTGAATTAAGCTGTAATGTAACTGGGCCAAGTTTCGAACTTCGGCTGGAATTAAAGTAACTGGGCCTAGTCTCGAGCTTGGACCTGAATTAAGCTGTCATTGTAACTGGGCCAAGTCTCGAACTTGGGCTGGAATTAAAGTATCTGGGCCAAGTCTCGAACTTGGGCTGGAATTAAAGTAACTGGGCCTAGTCTCGAACTTGGGCTTGAATTAAGCTGTTATTGTAACTGGGCCTAGTTCGTTTTGAACTTGGGCTTGAATTAAGCTGTTATTGTAACTGGGCCTATTCTCGAATTGGGCTTAAATTTAGCTGTTATTGTAACTGGGCCTATTCTCGAACTTGGGCTATTCAGAACCAGGCCTAATCTCTCTTGTATGAGGCTCATGAAATTCTTCTATACCTATTAAAATCATTTTTAGTTTATTTTAATTTGTCATTATCCTATTGGAAGAATTGTGTGCTTGAAAGTATTTTTCGTAATTATAGAAATTTTTGAATCAAGTTGCCTGGTTTATTTTATTTATATATAAAAAAGAAAATTTTTAATTTAATTTTAATTTAAATTGTATTTATCCATTCAATAGTGGATTTCAATTTGTCGTGACATCAATTATTCAGTTGGAGGCCATGGACCAGTTTGACAATTTACTGAACTTTTATAAGCTTGCAATTATTGCTCTACGTAAACCTAAAATTTATTTTTTATTATTTAAGAAATGTGGGCTCCATTTTTAATTTCAATTACTTTTGTAATATTTATTAGCACATATTATTTATTTATTTTTTTATTAAAACATCTAAGAAAATAATTAAACATTTAATTTTAATTTTATATCTAATCAGAGTTCATTGAAATTTGGTTGAACTAAACGGAAAAAAGTAACTTTTCACGAAATTAAAAAAAAAATAATAATAATAAATGGAAAAAAGAAAAATTCAGAAATCAATGTCTGCAACTGCAACCTTTTTGCTTCAAATCGCCATTGCCGGGAGCGGAGGGAGAAATGTAATGAGGAACTAAAGATTGTATCTCTAGGGCTTGAAGACGACTGCAAACAGAAGCTTTCTTGAAGCTCAATTATTCAGCTCTCCACTCCATCTTCTTCGAGCAAGGTCAGTAAAGAAAGATTAACTTCGATTTCAGCGTTTTTCTTTACTTTTAGGATCCAAATGTTCGTACTTCGACTTCATCTTCTTCGAACTTTTCAACTTCTCTTTAGCTGAGTTCAGATTCGTTTACAGATTCACTCCTACTAACTAAACAGAAATGGTTCTGGATTCAATCTCTTATTTTCCTTTTTAAGGTAATGAATCCCATCTTCTCCACTTCACTTCAGAAGCCAAAGCAATTTTGTTTTTGTTTTTATTTTTGTAACATTATGATAATTCTACTATTTCCTAATTGTAGGTTGTGAATTTCATTAGTTCTCATCGTTTGTGTTCTCATTGA

mRNA sequence

ATGATCCGAGCTCAGCCCCCACCACATGTGTTCTGTAAAAGCCCTGCAATGATTGTTGCTTCAATCGCACAGAAATTGGCAGGCCAGCCCACCCACCCACTTTCCGCCATTACCGAACTCTTTCGAACTTCGGCTGGAATTAAAGTAACTGGGCCTAGTCTCGAGCTTGGACCTGAATTAAGCTGTCATTGTAACTGGGCCAAGTCTCGAACTTGGGCTGGAATTAAAGTATCTGGGCCAAGTCTCGAACTTGGGCTGGAATTAAAACGACTGCAAACAGAAGCTTTCTTGAAGCTCAATTATTCAGCTCTCCACTCCATCTTCTTCGAGCAAGATTCACTCCTACTAACTAAACAGAAATGGTTCTGGATTCAATCTCTTATTTTCCTTTTTAAGGTTGTGAATTTCATTAGTTCTCATCGTTTGTGTTCTCATTGA

Coding sequence (CDS)

ATGATCCGAGCTCAGCCCCCACCACATGTGTTCTGTAAAAGCCCTGCAATGATTGTTGCTTCAATCGCACAGAAATTGGCAGGCCAGCCCACCCACCCACTTTCCGCCATTACCGAACTCTTTCGAACTTCGGCTGGAATTAAAGTAACTGGGCCTAGTCTCGAGCTTGGACCTGAATTAAGCTGTCATTGTAACTGGGCCAAGTCTCGAACTTGGGCTGGAATTAAAGTATCTGGGCCAAGTCTCGAACTTGGGCTGGAATTAAAACGACTGCAAACAGAAGCTTTCTTGAAGCTCAATTATTCAGCTCTCCACTCCATCTTCTTCGAGCAAGATTCACTCCTACTAACTAAACAGAAATGGTTCTGGATTCAATCTCTTATTTTCCTTTTTAAGGTTGTGAATTTCATTAGTTCTCATCGTTTGTGTTCTCATTGA

Protein sequence

MIRAQPPPHVFCKSPAMIVASIAQKLAGQPTHPLSAITELFRTSAGIKVTGPSLELGPELSCHCNWAKSRTWAGIKVSGPSLELGLELKRLQTEAFLKLNYSALHSIFFEQDSLLLTKQKWFWIQSLIFLFKVVNFISSHRLCSH
Homology
[Close]
BLAST of Csor.00g215300 vs. NCBI nr
Match: KAG6589942.1 (hypothetical protein SDJN03_15365, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 293 bits (749), Expect = 7.00e-100
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0 

Query: 1   MIRAQPPPHVFCKSPAMIVASIAQKLAGQPTHPLSAITELFRTSAGIKVTGPSLELGPEL 60
           MIRAQPPPHVFCKSPAMIVASIAQKLAGQPTHPLSAITELFRTSAGIKVTGPSLELGPEL
Sbjct: 1   MIRAQPPPHVFCKSPAMIVASIAQKLAGQPTHPLSAITELFRTSAGIKVTGPSLELGPEL 60

Query: 61  SCHCNWAKSRTWAGIKVSGPSLELGLELKRLQTEAFLKLNYSALHSIFFEQDSLLLTKQK 120
           SCHCNWAKSRTWAGIKVSGPSLELGLELKRLQTEAFLKLNYSALHSIFFEQDSLLLTKQK
Sbjct: 61  SCHCNWAKSRTWAGIKVSGPSLELGLELKRLQTEAFLKLNYSALHSIFFEQDSLLLTKQK 120

Query: 121 WFWIQSLIFLFKVVNFISSHRLCSH 145
           WFWIQSLIFLFKVVNFISSHRLCSH
Sbjct: 121 WFWIQSLIFLFKVVNFISSHRLCSH 145

The following BLAST results are available for this feature:
BLAST of Csor.00g215300 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g215300 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6589942.17.00e-100100.00hypothetical protein SDJN03_15365, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g215300 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g215300 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g215300.m01Csor.00g215300.m01mRNA