Csor.00g214120 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g214120
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionEukaryotic translation initiation factor 3 subunit K
LocationCsor_Chr10: 3794933 .. 3797462 (+)
RNA-Seq ExpressionCsor.00g214120
SyntenyCsor.00g214120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAAGAGATGGCGTCCGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCCGACATCCTTCCCGATCTCGAAAACTACGTAAACGAGCAGGTTTCTTTCCATCTGTATCATATGTTGTCAGTTCAATTTGTGTAAAATGCAATAATCTCCTCGATTGTGTTTACATCTGTAATCGTACGTCAGAACTGAGAGAACTCTGATCTTATTTTAGTTAGATAGATTGAACGTTTGTGTTACAGGTCTCGTCAGAAACGTACAGCTTAGATGCTAATCTATGTCTTCTTCGCCTCTACCAGGTAACTATACTACTAATCTACTAGCTGCTAATGGATTTACTTCTTTTACTACTTATATTGTTCGTCTTGTTTGAAAGTGTCATCTGAGAAACTTGTATTAGTCAAATTTTCAGAAAAAAGGTTAGGCTCTAAATTGATCGTGGTTCTTGTTTAGGGATAGGTTTGCCATTTAATCCTTAAGTTTCCATTGATGTTTTATTTATTTATTTTTGGTTCACTGTCATTTACTTTAAGAAAAATTAGAATGCATTCTGGTGCTGATGGCCTTGTAACTTAAACTTTTGATTGTTTAGCCTCTGTGTTTTTCGATCGATTCATATGGTTTATATTCTAGCAAATTAATTGTTGCTTGATTTACAGTTTGAGCCAGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGTGTGTTTTCCTTCTAAATTTCTTTGATCTCACATATTGTGAAGAATTAAATTCAATACGTTCTTCATTCAGCTTAATTTTGAAGTTTCTGTGTGATTTGTGAATAGGCTTTGATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGTGTGGTATGCGTTAACTCTTTCGTATTTCACTGCTTTATTTTAAGATGCTTATGTCACTTTAATTCCAGAACAAATGGTATGTGTTTACCCTATTGTAGTTCACCATCCCTTAAGTTTCATTACTAATTTTATTTAGAGATCTCTATGTCCTAGTAAATTTGATTGATCTTTAGAGCAAACAATTGGGGTGTCATTTCTTGTTTAGAGATCCCTTAAGTTTGATTACTAACATTGCTGCTGAGTATTTTCACATTATTTGCTGTCATTTCTTGTGCTAAATCTTGTTTAGAGATCCCTTAATGACACACTTTATACATATTATTATCAGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGGTGTGCAAGTTTCTTTACGTTTTTCTTCTTTGAATCCCTTAATTTTAATCTTTAGAAGCATGCTCATGCAAAAGTTCTGACTATTTTGATCTTATTTACGTGTAGACTGGAAAGTTTCGTCAATTTTGGGATGAAGCTTCCAAGAACCGTCACATAGTTGAAGCCGTGCCAGGTACGTAGGAACTATAAGGCAGAAATTTGTTTGTTTGAGCGACTCTAGAGAATGCATTTGACTGACCTGAAGAAGAATTGAGATGGGTTTTCAACTTGCTTGCTTTGTTTCTAGACCAAGCCCTGTTTAGCTGTTCCTGATATGTAAATACGATACAGGTTTCGAGAAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCGGAGGTATGGTTTATAAAATGTCTGCCGTTTTAATAATCTTGGAGTCGGTACTTTAACATCATCGTTGTCTTTTTTCATTCGCGTTTTAGTGTCTATGCGACTTGACAATGATATCCTGCTAATGTTCTAGTTGATAATTTACATCGTGATTTATCTTTTCTGCCGTTAGCTATAACGTAAATCCTACTCCAAACAACCTTGTTTATTTTCTGTCTGATATGCTACAAGGATACGAACCCGTCAACCCGAATTCATGTCGTTTTGGAGTTCTTTGCTTCAATCAATACTTTTTAATGCTTATGTTTAATACTCTGTGTGTATCTACTCCAAACAACCTTGTTTATTTTCTGTCTGACATGCTATCAAGGATGCGAACCCGTCAAACCCAGATTCATGTCGTTTTGGAGTTCTTGGCTTCGATCAATACTTTTTAATGCTCTATGTTTAATACTCTGTGTGTATCTACTCCAAACAACCTTGTTTATTTTCTGTCTGACATGTTATCAAGGATGCGAACCCGTCAACTCGAATTCATGTGGTTTTGGAGTTCTTTGCTTCAATCAATACTTTTCGATGCTCTATGTTAATACTCTGTGTGTATTTTAAATCTCATGTGGCATGTTATTACAGGCAATCAACATTGAGGGACTGTCATTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGAAAGGGCCAACTTATTGTTATACCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATCACTCGCATCTTCCCAATTCTTGGCTAA

mRNA sequence

ATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAAGAGATGGCGTCCGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCCGACATCCTTCCCGATCTCGAAAACTACGTAAACGAGCAGGTCTCGTCAGAAACGTACAGCTTAGATGCTAATCTATGTCTTCTTCGCCTCTACCAGTTTGAGCCAGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGCTTTGATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGTGTGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTTCGTCAATTTTGGGATGAAGCTTCCAAGAACCGTCACATAGTTGAAGCCGTGCCAGGTTTCGAGAAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCGGAGGCAATCAACATTGAGGGACTGTCATTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGAAAGGGCCAACTTATTGTTATACCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATCACTCGCATCTTCCCAATTCTTGGCTAA

Coding sequence (CDS)

ATGGGGAGAGAATTGCAGAAGCAGCCGCAGCAAGAGATGGCGTCCGCGGTGGAGCAGTTGCTCGCTGTGAATCCTTACAATCCCGACATCCTTCCCGATCTCGAAAACTACGTAAACGAGCAGGTCTCGTCAGAAACGTACAGCTTAGATGCTAATCTATGTCTTCTTCGCCTCTACCAGTTTGAGCCAGAGAGAATGAGTACCCAAATTGTGGCTCGCATCCTGGTCAAGGCTTTGATGGCAATGCCAGCTCCAGATTTCAGCCTTTGTCTCTTTTTAATTCCAGAACGTGTGCAAATGGAGGATCAATTCAAGACTTTGATTATACTTTCCCACTATTTGGAGACTGGAAAGTTTCGTCAATTTTGGGATGAAGCTTCCAAGAACCGTCACATAGTTGAAGCCGTGCCAGGTTTCGAGAAAGCAATTCAAGCTTATGCAGTCCATGTTCTTTCCTTAACTTATCAAAAGGTTCCTAGATCTGTGCTTGCGGAGGCAATCAACATTGAGGGACTGTCATTGGACAAATTTCTTGAGCACCAAGTTGCAAACTCTGGTTGGATTCTTGAGAAAGGTCATGGAAAGGGCCAACTTATTGTTATACCACCCAACGAATTCAACCATCCTGAACTGAAGAAGAAATCCTCCGACAGCATTCCCTTGGAACACATCACTCGCATCTTCCCAATTCTTGGCTAA

Protein sequence

MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Homology
[Close]
BLAST of Csor.00g214120 vs. ExPASy Swiss-Prot
Match: Q9SZA3 (Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana OX=3702 GN=TIF3K1 PE=2 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 2.6e-97
Identity = 175/232 (75.43%), Postives = 208/232 (89.66%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MG E+Q  PQ++ +  VEQL+A+NP+NP+ILPDLENYVN  V+S+TYSL+ NLCLLRLYQ
Sbjct: 1   MGVEIQ-SPQEQSSYTVEQLVALNPFNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERM+T IVARILVKALMAMP PDFSLCLFLIPERVQME+QFK+LI+LSHYLETG+F+
Sbjct: 61  FEPERMNTHIVARILVKALMAMPTPDFSLCLFLIPERVQMEEQFKSLIVLSHYLETGRFQ 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEA+KNRHI+EAVPGFE+AIQAYA H+LSL+YQKVPRSVLAEA+N++G SLDKF+E 
Sbjct: 121 QFWDEAAKNRHILEAVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQ 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 233
           QV NSGWI+EK   +G  IV+P NEFNHPELKK + +++PLEHI RIFPILG
Sbjct: 181 QVTNSGWIVEK---EGGSIVLPQNEFNHPELKKNTGENVPLEHIARIFPILG 226

[Close]
BLAST of Csor.00g214120 vs. ExPASy Swiss-Prot
Match: Q94HF1 (Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japonica OX=39947 GN=TIF3K1 PE=2 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.8e-97
Identity = 167/215 (77.67%), Postives = 199/215 (92.56%), Query Frame = 0 

Query: 17  VEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQIVARILV 76
           VE+L+AVNPYNPDIL DLE +VN+QVS++TY+LDANL LLRLYQFEPER+S QIV+RIL+
Sbjct: 12  VEELVAVNPYNPDILNDLEGFVNDQVSNQTYNLDANLSLLRLYQFEPERLSVQIVSRILI 71

Query: 77  KALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEASKNRHIVEAV 136
           KALMAMP PDFSLCLFLIPE VQME+QFKTLI+LSHYLET +FRQFWDEASKNR+I++ V
Sbjct: 72  KALMAMPGPDFSLCLFLIPEHVQMEEQFKTLIVLSHYLETARFRQFWDEASKNRNILDVV 131

Query: 137 PGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWILEKGHGKG 196
           PGFE+AIQ+YA+HVLSLTYQKVPR VLAEAINIEGL+LDKFLEH +ANSGW++EKG  + 
Sbjct: 132 PGFEQAIQSYAIHVLSLTYQKVPRPVLAEAINIEGLALDKFLEHHIANSGWVIEKG-ARS 191

Query: 197 QLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPIL 232
           QLIV+P NEFNHPELKK +++++P EH+TRIFP+L
Sbjct: 192 QLIVLPRNEFNHPELKKNTAETVPFEHVTRIFPVL 225

[Close]
BLAST of Csor.00g214120 vs. ExPASy Swiss-Prot
Match: Q3T0V3 (Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus OX=9913 GN=EIF3K PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 5.8e-28
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 0 

Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEASKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDSQLKVWMSKYGWSA 184

Query: 190 EKGHGKGQLIVIPPNEFNHPE--LKKKSSDSI 220
           ++    GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE---SGQIFICSQEESIKPKNIVEKIDFDSV 210

[Close]
BLAST of Csor.00g214120 vs. ExPASy Swiss-Prot
Match: Q9UBQ5 (Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens OX=9606 GN=EIF3K PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.5e-28
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 0 

Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEASKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLSDSQLKVWMSKYGWSA 184

Query: 190 EKGHGKGQLIVIPPNEFNHPE--LKKKSSDSI 220
           ++    GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE---SGQIFICSQEESIKPKNIVEKIDFDSV 210

[Close]
BLAST of Csor.00g214120 vs. ExPASy Swiss-Prot
Match: Q9DBZ5 (Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus OX=10090 GN=Eif3k PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 7.5e-28
Identity = 71/212 (33.49%), Postives = 115/212 (54.25%), Query Frame = 0 

Query: 10  QQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQFEPERMSTQ 69
           +Q  A+  + L  ++ YNP+ L  LE YV  Q     Y L+ANL +L+LYQF P    T 
Sbjct: 5   EQMRANVGKLLKGIDRYNPENLATLERYVETQAKENAYDLEANLAVLKLYQFNPAFFQTT 64

Query: 70  IVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFRQFWDEASKN 129
           + A+IL+KAL  +P  DF+LC  +I +  Q E   + ++ L   LET  F+ FW    +N
Sbjct: 65  VTAQILLKALTNLPHTDFTLCKCMIDQAHQEERPIRQILYLGDLLETCHFQAFWQALDEN 124

Query: 130 RHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEHQVANSGWIL 189
             ++E + GFE +++ +  HV+ +TYQ + R +LAE +   G   D  L+  ++  GW  
Sbjct: 125 MDLLEGITGFEDSVRKFICHVVGITYQHIDRWLLAEML---GDLTDNQLKVWMSKYGWSA 184

Query: 190 EKGHGKGQLIVIPPNEFNHPE--LKKKSSDSI 220
           ++    GQ+ +    E   P+  ++K   DS+
Sbjct: 185 DE---SGQVFICSQEESIKPKNIVEKIDFDSV 210

[Close]
BLAST of Csor.00g214120 vs. NCBI nr
Match: XP_023516999.1 (eukaryotic translation initiation factor 3 subunit K-like [Cucurbita pepo subsp. pepo] >KAG6590060.1 Eukaryotic translation initiation factor 3 subunit K, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 458 bits (1179), Expect = 1.43e-162
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232

[Close]
BLAST of Csor.00g214120 vs. NCBI nr
Match: KAG7023727.1 (Eukaryotic translation initiation factor 3 subunit K, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 457 bits (1175), Expect = 5.82e-162
Identity = 231/232 (99.57%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQK PRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKAPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232

[Close]
BLAST of Csor.00g214120 vs. NCBI nr
Match: XP_022961240.1 (eukaryotic translation initiation factor 3 subunit K-like [Cucurbita moschata])

HSP 1 Score: 455 bits (1170), Expect = 3.36e-161
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTY K PRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYHKAPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232

[Close]
BLAST of Csor.00g214120 vs. NCBI nr
Match: XP_023530808.1 (eukaryotic translation initiation factor 3 subunit K-like [Cucurbita pepo subsp. pepo] >KAG6588109.1 Eukaryotic translation initiation factor 3 subunit K, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021993.1 Eukaryotic translation initiation factor 3 subunit K [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 454 bits (1168), Expect = 6.79e-161
Identity = 229/232 (98.71%), Postives = 232/232 (100.00%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEA+KNRHIVEAVPGFE+AIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232

[Close]
BLAST of Csor.00g214120 vs. NCBI nr
Match: XP_022147729.1 (eukaryotic translation initiation factor 3 subunit K [Momordica charantia])

HSP 1 Score: 454 bits (1167), Expect = 9.65e-161
Identity = 229/232 (98.71%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALM MPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMEMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEA+KNRHIVEAVPGFE+AIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232

[Close]
BLAST of Csor.00g214120 vs. ExPASy TrEMBL
Match: A0A6J1HBM6 (Eukaryotic translation initiation factor 3 subunit K OS=Cucurbita moschata OX=3662 GN=LOC111461808 PE=3 SV=1)

HSP 1 Score: 455 bits (1170), Expect = 1.63e-161
Identity = 230/232 (99.14%), Postives = 230/232 (99.14%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTY K PRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYHKAPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232

[Close]
BLAST of Csor.00g214120 vs. ExPASy TrEMBL
Match: A0A6J1D1W0 (Eukaryotic translation initiation factor 3 subunit K OS=Momordica charantia OX=3673 GN=LOC111016592 PE=3 SV=1)

HSP 1 Score: 454 bits (1167), Expect = 4.67e-161
Identity = 229/232 (98.71%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALM MPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMEMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEA+KNRHIVEAVPGFE+AIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232

[Close]
BLAST of Csor.00g214120 vs. ExPASy TrEMBL
Match: A0A6J1JLW5 (Eukaryotic translation initiation factor 3 subunit K OS=Cucurbita maxima OX=3661 GN=LOC111485585 PE=3 SV=1)

HSP 1 Score: 452 bits (1163), Expect = 1.90e-160
Identity = 229/232 (98.71%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMAMPAPDFSL LFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAMPAPDFSLSLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVA+SGWILEKGHGKGQL+VIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVASSGWILEKGHGKGQLVVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232

[Close]
BLAST of Csor.00g214120 vs. ExPASy TrEMBL
Match: A0A6J1HSW3 (Eukaryotic translation initiation factor 3 subunit K OS=Cucurbita maxima OX=3661 GN=LOC111467477 PE=3 SV=1)

HSP 1 Score: 451 bits (1159), Expect = 7.75e-160
Identity = 227/232 (97.84%), Postives = 231/232 (99.57%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEA+KNRHIVEAVPGFE+AIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKGHGKGQLIV+PPNEFNHPELKKKSSDSIPLEHITRIFPIL 
Sbjct: 181 QVANSGWILEKGHGKGQLIVMPPNEFNHPELKKKSSDSIPLEHITRIFPILS 232

[Close]
BLAST of Csor.00g214120 vs. ExPASy TrEMBL
Match: A0A6J1F614 (Eukaryotic translation initiation factor 3 subunit K OS=Cucurbita moschata OX=3662 GN=LOC111441150 PE=3 SV=1)

HSP 1 Score: 449 bits (1155), Expect = 3.39e-159
Identity = 229/234 (97.86%), Postives = 232/234 (99.15%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ
Sbjct: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERMSTQIVARILVKALMA+PAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR
Sbjct: 61  FEPERMSTQIVARILVKALMAIPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEA+KNRHIVEAVPGFE+AIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH
Sbjct: 121 QFWDEAAKNRHIVEAVPGFEQAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180

Query: 181 QVANSGWILEKG--HGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 232
           QVANSGWILEKG  HGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG
Sbjct: 181 QVANSGWILEKGKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 234

[Close]
BLAST of Csor.00g214120 vs. TAIR 10
Match: AT4G33250.1 (eukaryotic translation initiation factor 3K )

HSP 1 Score: 356.3 bits (913), Expect = 1.9e-98
Identity = 175/232 (75.43%), Postives = 208/232 (89.66%), Query Frame = 0 

Query: 1   MGRELQKQPQQEMASAVEQLLAVNPYNPDILPDLENYVNEQVSSETYSLDANLCLLRLYQ 60
           MG E+Q  PQ++ +  VEQL+A+NP+NP+ILPDLENYVN  V+S+TYSL+ NLCLLRLYQ
Sbjct: 1   MGVEIQ-SPQEQSSYTVEQLVALNPFNPEILPDLENYVN--VTSQTYSLEVNLCLLRLYQ 60

Query: 61  FEPERMSTQIVARILVKALMAMPAPDFSLCLFLIPERVQMEDQFKTLIILSHYLETGKFR 120
           FEPERM+T IVARILVKALMAMP PDFSLCLFLIPERVQME+QFK+LI+LSHYLETG+F+
Sbjct: 61  FEPERMNTHIVARILVKALMAMPTPDFSLCLFLIPERVQMEEQFKSLIVLSHYLETGRFQ 120

Query: 121 QFWDEASKNRHIVEAVPGFEKAIQAYAVHVLSLTYQKVPRSVLAEAINIEGLSLDKFLEH 180
           QFWDEA+KNRHI+EAVPGFE+AIQAYA H+LSL+YQKVPRSVLAEA+N++G SLDKF+E 
Sbjct: 121 QFWDEAAKNRHILEAVPGFEQAIQAYASHLLSLSYQKVPRSVLAEAVNMDGASLDKFIEQ 180

Query: 181 QVANSGWILEKGHGKGQLIVIPPNEFNHPELKKKSSDSIPLEHITRIFPILG 233
           QV NSGWI+EK   +G  IV+P NEFNHPELKK + +++PLEHI RIFPILG
Sbjct: 181 QVTNSGWIVEK---EGGSIVLPQNEFNHPELKKNTGENVPLEHIARIFPILG 226

The following BLAST results are available for this feature:
BLAST of Csor.00g214120 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SZA32.6e-9775.43Eukaryotic translation initiation factor 3 subunit K OS=Arabidopsis thaliana OX=... [more]
Q94HF15.8e-9777.67Eukaryotic translation initiation factor 3 subunit K OS=Oryza sativa subsp. japo... [more]
Q3T0V35.8e-2833.49Eukaryotic translation initiation factor 3 subunit K OS=Bos taurus OX=9913 GN=EI... [more]
Q9UBQ57.5e-2833.49Eukaryotic translation initiation factor 3 subunit K OS=Homo sapiens OX=9606 GN=... [more]
Q9DBZ57.5e-2833.49Eukaryotic translation initiation factor 3 subunit K OS=Mus musculus OX=10090 GN... [more]
BLAST of Csor.00g214120 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023516999.11.43e-162100.00eukaryotic translation initiation factor 3 subunit K-like [Cucurbita pepo subsp.... [more]
KAG7023727.15.82e-16299.57Eukaryotic translation initiation factor 3 subunit K, partial [Cucurbita argyros... [more]
XP_022961240.13.36e-16199.14eukaryotic translation initiation factor 3 subunit K-like [Cucurbita moschata][more]
XP_023530808.16.79e-16198.71eukaryotic translation initiation factor 3 subunit K-like [Cucurbita pepo subsp.... [more]
XP_022147729.19.65e-16198.71eukaryotic translation initiation factor 3 subunit K [Momordica charantia][more]
BLAST of Csor.00g214120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HBM61.63e-16199.14Eukaryotic translation initiation factor 3 subunit K OS=Cucurbita moschata OX=36... [more]
A0A6J1D1W04.67e-16198.71Eukaryotic translation initiation factor 3 subunit K OS=Momordica charantia OX=3... [more]
A0A6J1JLW51.90e-16098.71Eukaryotic translation initiation factor 3 subunit K OS=Cucurbita maxima OX=3661... [more]
A0A6J1HSW37.75e-16097.84Eukaryotic translation initiation factor 3 subunit K OS=Cucurbita maxima OX=3661... [more]
A0A6J1F6143.39e-15997.86Eukaryotic translation initiation factor 3 subunit K OS=Cucurbita moschata OX=36... [more]
BLAST of Csor.00g214120 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33250.11.9e-9875.43eukaryotic translation initiation factor 3K [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033464CSN8/PSMD8/EIF3KPFAMPF10075CSN8_PSD8_EIF3Kcoord: 67..194
e-value: 7.0E-17
score: 61.7
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 128..230
e-value: 4.5E-18
score: 67.3
IPR016020Translation initiation factor 3, subunit 12, N-terminal, eukaryoticGENE3D1.25.40.250ARM repeat; domain 1coord: 8..125
e-value: 7.8E-42
score: 143.8
NoneNo IPR availablePANTHERPTHR13022:SF3EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Kcoord: 8..232
IPR009374Eukaryotic translation initiation factor 3 subunit KPANTHERPTHR13022EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 11coord: 8..232
IPR009374Eukaryotic translation initiation factor 3 subunit KHAMAPMF_03010eIF3kcoord: 8..232
score: 24.237696
IPR000717Proteasome component (PCI) domainPROSITEPS50250PCIcoord: 47..206
score: 13.103519
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 10..135
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 137..229

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g214120.m01Csor.00g214120.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0001732 formation of cytoplasmic translation initiation complex
biological_process GO:0006446 regulation of translational initiation
cellular_component GO:0016282 eukaryotic 43S preinitiation complex
cellular_component GO:0033290 eukaryotic 48S preinitiation complex
cellular_component GO:0005852 eukaryotic translation initiation factor 3 complex
cellular_component GO:0005737 cytoplasm
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0043022 ribosome binding
molecular_function GO:0003743 translation initiation factor activity