Csor.00g213090 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g213090
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RNA polymerase sigma factor sigA-like
Location	Csor_Chr20: 5455843 .. 5459801 (-)
RNA-Seq Expression	Csor.00g213090
Synteny	Csor.00g213090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGGCAACAACAACTGCAATAACTGGGCTTGGTGCAGCCAAGAGGCTGTTCAATTCTTCGTCCTATTATTCTGATTTCACAGAAAAGGTTTTGTATGCCAATGACCACAGGATTGGACAAACCCAGGTTTCCCCTACAAAGAGTGTGGTAATAACAGCAAGAAGTTCGGCTAACTTTTCTCCGAGAAATCAGTCGTCGAATCGGCACGGGCATTGCATCAAAGCTGTGAAGGAACATGTAGATACACCCTCTTCTCCAACTGCTGAACCAAGGCTTCATAATAGCACGATCTGGGAAGATGAAGAAACTGATCTGAAATGTACTGTGGAGGCTCTTCTTTTGCTGCAAAAGTCTATGCTGGAGAAGCAATGGAATCTATCTTTCGATCAAACCATGTTGGCCGATACGCCGAGAGGAAAAACACAGAAGAAAGTACCTGTCACTTGTTCTGGTGTGTCTGCACGACAAAGGAGAATGAGTTCTAAGAGGAAAATACAGAGCAAACATGTTCTTATGGCTCAGCCAAGAATCAGCAAACAGTTAAGGCCTACAATCAATCCTGAGCTATTACAAAATCGATTAAAGGGGTATGTGAGAGGTTTATTAAGTGAAGAGTTACTTTCTCATGCTGAAGTTGTACGTCTTTCGAAGAAAATCAAAGTCGGTCTCGCATTGGAGGAGCGCAAAACCAGGTCAGCACATTCTTATGTTCTTATTCAGATTTTCATAGTTACTCCAAGCTTTGTACTATCCAAGCCCACGGCTAACAGATATTTTCTGGTTTGTAACTAGTAGATATTGTCACGGCTAGCAGATATTGTCCTCTTTGAGTTTTCTGCTTTGTAACTAGTAGATATTGTCCTCTTTATGTTTCCGCTTTGTAACTACCCAAACTCACAGCTAGCAGGTATTGTCTTCTTTGGGTTTTCTCTTTTGAGCTAGCCCTCAAGGTTTTTAAAACGTGTCTGCTAAGAAGAGGTTTCCACACCCTTGTAAAGAATGTTTCGTTTTCCTCTCCAACCGATGTGAAATCTCACAATCCAACCCCCTTCGAGGCCCAGCATCCTCCCTGACACTCGTTCCCCTCTCCAATCAATGTGGGATCTCACAATCCACCCTCCTTCAAGGCCCAGTGTTCTCACTAGCACTCGTTTCTCTCTAATCGATGTGAGATCTCACAAGTCCACCCTCCTTCGGAGCCTAACGTCCTTGTTGGCATACCGCCTGGTGTCTAGTTCTGATACCATTTGTAACAACCAAAGCTCACCGCTAGTAGATATTGTCTGTTTTGACCCATTACGCATCGCCGTCAACCTCACCGTTTTAAAACATGTCTACTAAGGAGAGGTTTCCACACCCTTATAAGGAATACTCCGTTCCCCTCTCGAACCAACGTGGGATCTCACAACATTTACGTATACAATTGAGTAATAGTAGTAGATAGTATTATTCCTACTTGGATGGCCTCAGGGTGGGATAAAACCATTCAACACTTAAACTCTTTTCCGGCCGTTTTCTTCCCATGATTAGTCTTATCCTAACTGAACTAATGTGAAAAAGAAACCCATCATATGTTTATATGCTTCTGTTACTCCATTGTCAAAACTGATGCTCTAATAATGACATCATGAACTTCACATTTTGTTCTCCCTAACCTCTGTAATGAACCTCAGACTAAAGGAAAGATTAGGATGTGAGCCCTCTGAAGACCAACTAGCAATATCACTCAAGATTTCTCGTGCCAAATTACGGTCAAGTGTAATGGAATGTTCATTAGCAAGAGAGAAGCTAGCAATGAGCAATGTTCGTTTGGTTATGTCTATTGCGCAAAGATACGACAAAATGGGGGCTGAAATGGATGACTTAGTTCAGGTGAAGAGCTTATGACAGCCCCTACAGAGCTAACTCTACACCTATTAGCTTCCCTGTAATTGAAGAGTTTGTTCATGTCTAATGTAGGGTGGCTTAATTGGACTTCTCCGTGGGATAGAGAAGTTTGATTCTTCAAAGGGGTTTAAAATCTCAACCTATGTTTATTGGTGGATACGCCAGGTGAGAAAACAACTACACTTCTGTATCATGAACACTTGGAGATCAAACATGTTGATTTGCCAAGAATAAAAGGAGAGATATTAAATCAGTTAATGTAAGCATCTAAATTGGAGAATGCATACCATGTTATAGCACGCACTGACAGCAGTTGAATGTCTACATCCATGTGCAGGGTGTTTCAAAAGCATTAGTTGAGAATTCAAGAATGCTAAGATTGCCGACTCATATGCATGAAAGATTAGGATTGATTCGCAACGCTAAAGTTAGACTGCAAGAGAAAGGAATCACTCCATCAATTGATGTAAGTGGATAACTAACTGTTATAACACTGCACCAAAATATTGCTGAACACTGCTTACTGACATTAAAATATTGCTAAACGCTGCTTACTGACATTAAAGACCACAAACTTAGACTCAGATGTGAACTATATCAGCTCAAGTCCACCGCTAACATATATTGTTTTCTTTGGACTTTCCCTTTCGGACTTCCCCTCAAAGTTTTTAAAACATGTCTGCTAGGGAGAGATTTTCACACCCTTATAAAGAATGTTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACAGTCCACCCCCTTCAAGACCCAGCCCGGGCACTCGTTCCCCACTCCAATTGGAGTGGGATCTCACAATTAACCCCCCTTCAGGCCTAACATCCTCGCTAGCACTCGTTCCTCTCTCCAATCACCGTGGGATCTAACAATCCACCCTCCTTCAGGGCCAGCGTCCTCACTGGCACACCGCTCGGTGTCCACCCCCCTTCGGGGCTCAGCATCCTCGCTAGTACACCATCCAGTGACTAGCTCTGATACCAACTGTAACGACCCTAGATTTTTTTACTAACCTAAAGTCGCTACCATATACATAACATCACCGTTTATGCAGAAATAATCATTTGAAACGTATTCATAGAACATTGGACTGGCATGTTTAATAAAAAGTCTTGGAAACAAAACGGAAAAATGAAAATAGACATGAGTAAAAATAAAACAGAAATACCCATACTAACCTACATGAACTTTGTGAACTTTGGGATTTCCTTAACACTTGTCTATTTGTCCCAGAGGATTGCAGAATCCTTAAACATGTCCAAAAAGAAAGTCAAGAACGCCACAGAGGTACTACAAACTTCTAATAACCCAATTACTGTGCTTTATCCTAATGAATCTCTGTTTTCATTTTCCTTATTAAGCCAACCAATCATCTCTTTTAGGCAATAAGCAAGGTGTTCTCGCTAGACCGAGAGGCATTTCCTTCATTAAATGGTCTTCCAGGCGAAACTCATCATAGTGTAAGACTTGAATAGAAACTCTGTTTCTTCAAACATAACATGTTTTTCAGAACTTTGTTCTAAATTTTTGGCGTTGCTTGAATTCCTTTGTTTTTGCAGTATATTGCAGATAACTGCCTCGAGAACAACCCATGGCATGGAACAGACATATGGATTCTGAAGGTAAAATAATCGACCACAAAACCAAGAAAATAGACTTAAAAGAGTGAAAAACTATACTATTTTCATCAATATAAGGTGAAGAATGATGAGTTGTTTGCTTATACACTGAAAAATATTGGCAGGCTGAGGTTAACAAGCTCATAACTACGACACTTGGGGACCGAGAAAGAGAGATCATACGCCTATACCACGGTCTGGATAACGAGTGTCTGACATGGGAGGAAATAAGCAAACGGTAAGCAAGAGAAACTTAATCGAGCAAAATGTCGATGATGTTCTAAGTTAGCTGACAAAATGCACTTTGTGGTCTGAGTTTTTCAGCATAGGGTTGTCCAGAGAAAGAGTAAGACAAATTGGACTAGTGGCGTGGGAGAAACTAAAGAAGGCAGCCAAGACAAGGCAGATGGAAGCCATGTTGCTTAAACACTAA

mRNA sequence

ATGATGGCAACAACAACTGCAATAACTGGGCTTGGTGCAGCCAAGAGGCTGTTCAATTCTTCGTCCTATTATTCTGATTTCACAGAAAAGGTTTTGTATGCCAATGACCACAGGATTGGACAAACCCAGGTTTCCCCTACAAAGAGTGTGGTAATAACAGCAAGAAGTTCGGCTAACTTTTCTCCGAGAAATCAGTCGTCGAATCGGCACGGGCATTGCATCAAAGCTGTGAAGGAACATGTAGATACACCCTCTTCTCCAACTGCTGAACCAAGGCTTCATAATAGCACGATCTGGGAAGATGAAGAAACTGATCTGAAATGTACTGTGGAGGCTCTTCTTTTGCTGCAAAAGTCTATGCTGGAGAAGCAATGGAATCTATCTTTCGATCAAACCATGTTGGCCGATACGCCGAGAGGAAAAACACAGAAGAAAGTACCTGTCACTTGTTCTGGTGTGTCTGCACGACAAAGGAGAATGAGTTCTAAGAGGAAAATACAGAGCAAACATGTTCTTATGGCTCAGCCAAGAATCAGCAAACAGTTAAGGCCTACAATCAATCCTGAGCTATTACAAAATCGATTAAAGGGGTATGTGAGAGGTTTATTAAGTGAAGAGTTACTTTCTCATGCTGAAGTTGTACGTCTTTCGAAGAAAATCAAAGTCGGTCTCGCATTGGAGGAGCGCAAAACCAGACTAAAGGAAAGATTAGGATGTGAGCCCTCTGAAGACCAACTAGCAATATCACTCAAGATTTCTCGTGCCAAATTACGGTCAAGTGTAATGGAATGTTCATTAGCAAGAGAGAAGCTAGCAATGAGCAATGTTCGTTTGGTTATGTCTATTGCGCAAAGATACGACAAAATGGGGGCTGAAATGGATGACTTAGTTCAGGGTGGCTTAATTGGACTTCTCCGTGGGATAGAGAAGTTTGATTCTTCAAAGGGGTTTAAAATCTCAACCTATGTTTATTGGTGGATACGCCAGGGTGTTTCAAAAGCATTAGTTGAGAATTCAAGAATGCTAAGATTGCCGACTCATATGCATGAAAGATTAGGATTGATTCGCAACGCTAAAGTTAGACTGCAAGAGAAAGGAATCACTCCATCAATTGATAGGATTGCAGAATCCTTAAACATGTCCAAAAAGAAAGTCAAGAACGCCACAGAGGCAATAAGCAAGGTGTTCTCGCTAGACCGAGAGGCATTTCCTTCATTAAATGGTCTTCCAGGCGAAACTCATCATAGTTATATTGCAGATAACTGCCTCGAGAACAACCCATGGCATGGAACAGACATATGGATTCTGAAGGCTGAGGTTAACAAGCTCATAACTACGACACTTGGGGACCGAGAAAGAGAGATCATACGCCTATACCACGGTCTGGATAACGAGTGTCTGACATGGGAGGAAATAAGCAAACGCATAGGGTTGTCCAGAGAAAGAGTAAGACAAATTGGACTAGTGGCGTGGGAGAAACTAAAGAAGGCAGCCAAGACAAGGCAGATGGAAGCCATGTTGCTTAAACACTAA

Coding sequence (CDS)

ATGATGGCAACAACAACTGCAATAACTGGGCTTGGTGCAGCCAAGAGGCTGTTCAATTCTTCGTCCTATTATTCTGATTTCACAGAAAAGGTTTTGTATGCCAATGACCACAGGATTGGACAAACCCAGGTTTCCCCTACAAAGAGTGTGGTAATAACAGCAAGAAGTTCGGCTAACTTTTCTCCGAGAAATCAGTCGTCGAATCGGCACGGGCATTGCATCAAAGCTGTGAAGGAACATGTAGATACACCCTCTTCTCCAACTGCTGAACCAAGGCTTCATAATAGCACGATCTGGGAAGATGAAGAAACTGATCTGAAATGTACTGTGGAGGCTCTTCTTTTGCTGCAAAAGTCTATGCTGGAGAAGCAATGGAATCTATCTTTCGATCAAACCATGTTGGCCGATACGCCGAGAGGAAAAACACAGAAGAAAGTACCTGTCACTTGTTCTGGTGTGTCTGCACGACAAAGGAGAATGAGTTCTAAGAGGAAAATACAGAGCAAACATGTTCTTATGGCTCAGCCAAGAATCAGCAAACAGTTAAGGCCTACAATCAATCCTGAGCTATTACAAAATCGATTAAAGGGGTATGTGAGAGGTTTATTAAGTGAAGAGTTACTTTCTCATGCTGAAGTTGTACGTCTTTCGAAGAAAATCAAAGTCGGTCTCGCATTGGAGGAGCGCAAAACCAGACTAAAGGAAAGATTAGGATGTGAGCCCTCTGAAGACCAACTAGCAATATCACTCAAGATTTCTCGTGCCAAATTACGGTCAAGTGTAATGGAATGTTCATTAGCAAGAGAGAAGCTAGCAATGAGCAATGTTCGTTTGGTTATGTCTATTGCGCAAAGATACGACAAAATGGGGGCTGAAATGGATGACTTAGTTCAGGGTGGCTTAATTGGACTTCTCCGTGGGATAGAGAAGTTTGATTCTTCAAAGGGGTTTAAAATCTCAACCTATGTTTATTGGTGGATACGCCAGGGTGTTTCAAAAGCATTAGTTGAGAATTCAAGAATGCTAAGATTGCCGACTCATATGCATGAAAGATTAGGATTGATTCGCAACGCTAAAGTTAGACTGCAAGAGAAAGGAATCACTCCATCAATTGATAGGATTGCAGAATCCTTAAACATGTCCAAAAAGAAAGTCAAGAACGCCACAGAGGCAATAAGCAAGGTGTTCTCGCTAGACCGAGAGGCATTTCCTTCATTAAATGGTCTTCCAGGCGAAACTCATCATAGTTATATTGCAGATAACTGCCTCGAGAACAACCCATGGCATGGAACAGACATATGGATTCTGAAGGCTGAGGTTAACAAGCTCATAACTACGACACTTGGGGACCGAGAAAGAGAGATCATACGCCTATACCACGGTCTGGATAACGAGTGTCTGACATGGGAGGAAATAAGCAAACGCATAGGGTTGTCCAGAGAAAGAGTAAGACAAATTGGACTAGTGGCGTGGGAGAAACTAAAGAAGGCAGCCAAGACAAGGCAGATGGAAGCCATGTTGCTTAAACACTAA

Protein sequence

MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLLKH

Homology

[Close]

BLAST of Csor.00g213090 vs. ExPASy Swiss-Prot
Match: O24629 (RNA polymerase sigma factor sigA OS=Arabidopsis thaliana OX=3702 GN=SIGA PE=1 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 5.4e-180
Identity = 345/516 (66.86%), Postives = 412/516 (79.84%), Query Frame = 0


Query: 5   TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRN 64
           T A+ GL   KRL +SS Y+SD TEK L  NDH   Q  ++ TKS  ITA+ ++N+SP  
Sbjct: 3   TAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKS-GITAKKASNYSPSF 62

Query: 65  QSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE------DEETDLKCTVEALLLLQK 124
            SSNRH    KA+KE VD  S  T +P L N T  E      D++  +  +VEA+LLLQK
Sbjct: 63  PSSNRHTQSAKALKESVDVAS--TEKPWLPNGTDKELEEECYDDDDLISHSVEAILLLQK 122

Query: 125 SMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMA 184
           SMLEK WNLSF++ + ++ P   T  +KK+PV TCSG+SARQRR+ +K+K    HV  ++
Sbjct: 123 SMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVS 182

Query: 185 QPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLK 244
                KQ+R             GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK
Sbjct: 183 DVSSGKQVR-------------GYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLK 242

Query: 245 ERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD 304
           +RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM 
Sbjct: 243 DRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMS 302

Query: 305 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGL 364
           DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGL
Sbjct: 303 DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGL 362

Query: 365 IRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH 424
           IRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETH
Sbjct: 363 IRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETH 422

Query: 425 HSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISK 484
           HSYIAD  LENNPWHG D   LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISK
Sbjct: 423 HSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISK 482

Query: 485 RIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 511
           RIGLSRERVRQ+GLVA EKLK AA+ R+MEAM+LK+
Sbjct: 483 RIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502

[Close]

BLAST of Csor.00g213090 vs. ExPASy Swiss-Prot
Match: Q0J7T6 (RNA polymerase sigma factor sigA OS=Oryza sativa subsp. japonica OX=39947 GN=SIGA PE=2 SV=2)

HSP 1 Score: 453.0 bits (1164), Expect = 4.5e-126
Identity = 261/531 (49.15%), Postives = 347/531 (65.35%), Query Frame = 0


Query: 2   MATTTAITGLGAAKRLFNSSSYYSD-FTEKVLY-------------ANDHRIGQTQVSPT 61
           M  T A+ GL A  RL ++S   +D   +KV                 D          T
Sbjct: 1   MTATPAVIGLSAGNRLLSASFGPTDLMPDKVSLGVGGGGGGGGGGGGGDAMSFAPPAPAT 60

Query: 62  KSVVITARSSANFSPRNQSS-----NRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDE 121
             +   A      SP  ++        H     A+      P  PT  P    +      
Sbjct: 61  PKLTAVAAHRLKLSPHGRAQVMRALRHHSSAAAALAPPPPPPPPPTPSPASRAA-----H 120

Query: 122 ETDLKCTVEALLLLQKSMLEKQWNLSFDQTM------LADTPRGKTQKKVPVTCSGVSAR 181
             DL+ ++EA++LLQ+SMLEKQW L FD         LA+     ++  V V  S VSAR
Sbjct: 121 AHDLESSLEAIVLLQRSMLEKQWELPFDDDNHAMAIGLAEDDDDTSKATVVVARSSVSAR 180

Query: 182 QRRMSSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRL 241
           QRRMS +R+ ++K         +      ++PEL+Q+R + Y+RG +S+ELL+H +VV L
Sbjct: 181 QRRMSGRRRGRTK---------NGAAHFAVSPELIQSRNRIYLRGTVSKELLTHKQVVHL 240

Query: 242 SKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNV 301
           S KIK G+ L++++++LKE+LG EPS  QLA SLKIS  +LRS + E  LARE L MSN+
Sbjct: 241 SHKIKDGIWLQQQRSKLKEKLGNEPSYKQLAHSLKISPPELRSRMHESFLAREMLTMSNL 300

Query: 302 RLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALV 361
           RLV+SIAQ+YD +G E+ DL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVS+AL 
Sbjct: 301 RLVISIAQKYDNLGVELADLIQGGLIGLLRGIEKFDASRGFRISTYVYWWIRQGVSRALA 360

Query: 362 ENSRMLRLPTHMHERLGLIRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVF 421
           ENS+  RLPT++HERL  IR AK  L+++GI P+I+ IA SLN+S+KKV NATEA++KV 
Sbjct: 361 ENSKTFRLPTYLHERLIAIRGAKYELEDQGIAPTIENIAGSLNISEKKVLNATEAVNKVL 420

Query: 422 SLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREII 481
           SLD++AFPSLNGLPGET HSYI D  + N+PWHG + W LK EVNKL+ +TL +RER+II
Sbjct: 421 SLDQQAFPSLNGLPGETLHSYIEDQNVANDPWHGFEEWYLKEEVNKLLNSTLNERERDII 480

Query: 482 RLYHGLDNECLTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQMEAML 508
           RLYHG+  +C TWE+IS++ GLSRERVRQ+GL+A EKLK AA+ + +EA+L
Sbjct: 481 RLYHGIGKQCHTWEDISRQFGLSRERVRQVGLIAMEKLKHAARRKNLEALL 517

[Close]

BLAST of Csor.00g213090 vs. ExPASy Swiss-Prot
Match: O22056 (RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 6.5e-40
Identity = 136/396 (34.34%), Postives = 209/396 (52.78%), Query Frame = 0


Query: 120 MLEKQWNLSFDQTMLADTPR-GKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRI 179
           +LE+Q ++S        T R  +  K +  T SG+ + +   S K+K      L+AQ   
Sbjct: 201 LLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIPSVKTGSSPKKK-----RLVAQ--- 260

Query: 180 SKQLRPTINPELLQNRLKGYVR-GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERL 239
                     E+  N    Y+R    S +LL+  E   LS  I+  L LE  +T L ER 
Sbjct: 261 ----------EVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELTERS 320

Query: 240 GCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLV 299
           G +P+  Q A +  + +  LR  +   +L ++K+  SN+RLV+SIA+ Y   G  + DLV
Sbjct: 321 GRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV 380

Query: 300 QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRN 359
           Q G  GL+RG EKFD++KGFK STY +WWI+Q V K+L + SRM+RLP HM E    ++ 
Sbjct: 381 QEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKE 440

Query: 360 AKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHS 419
           A+ +L  E G  P  + IAE+  +S K++     +     SLD++   + N  P E    
Sbjct: 441 ARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEV--- 500

Query: 420 YIADNCLENNPWHGTDIWI---LKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEI 479
            IAD           DI I   ++ +++K++  +LG RE+++IR   G+ D    T +EI
Sbjct: 501 -IAD----PEAVTSEDILIKEFMRQDLDKVL-DSLGTREKQVIRWRFGMEDGRMKTLQEI 560

Query: 480 SKRIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLL 509
            + +G+SRERVRQI   A+ KLK   +   ++  L+
Sbjct: 561 GEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLV 569

[Close]

BLAST of Csor.00g213090 vs. ExPASy Swiss-Prot
Match: Q03065 (RNA polymerase sigma-B factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=sigB PE=3 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-37
Identity = 95/293 (32.42%), Postives = 170/293 (58.02%), Query Frame = 0


Query: 207 LLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMECSL 266
           LLSH + +  +++++  + +   K  L E+L  EP+  + A  +++    L   + +  +
Sbjct: 37  LLSHEQEIFFAQQVQQMMVMFTAKEELAEKLQREPTLQEWADKMQLKEDVLLQQLSQGQI 96

Query: 267 AREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWW 326
           A++K+  +N+RLV+SIA++Y K   E  DL+Q G +GL RG+EKFD + G+K STY YWW
Sbjct: 97  AKQKMIQANLRLVVSIAKKYQKRNLEFLDLIQEGALGLERGVEKFDPTLGYKFSTYAYWW 156

Query: 327 IRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVRLQEK-GITPSIDRIAESLNMSKKKV 386
           IRQG+++A+ + SR +RLP HM ++L  I+  +  L +K G    +  IA++LN+   ++
Sbjct: 157 IRQGITRAIAQQSRTIRLPIHMADKLNKIKCVQRELSQKLGYIAGVTEIAQALNLEPSQI 216

Query: 387 KNATEAISKVFSLDREAFPSLNGLPGETH-HSYIADNCLENNPWHGTDIWILKAEVNKLI 446
           +   + + +  SLD        G   +T     + D+ +  +P    +  +L  +++ L+
Sbjct: 217 REYLQLVRQPVSLDMRI-----GFEQDTQLQDLLKDDGM--SPERYAERELLYQDIHNLL 276

Query: 447 TTTLGDREREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVAWEKLKK 497
              L  +++E++ L  GL   C LT  +IS+R+G+SRERVRQ+   A   L++
Sbjct: 277 -AKLTPQQKEVLILRFGLAGGCELTLVQISQRMGISRERVRQVEKQALTLLRR 321

[Close]

BLAST of Csor.00g213090 vs. ExPASy Swiss-Prot
Match: P18182 (RNA polymerase principal sigma factor HrdA OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) OX=100226 GN=hrdA PE=1 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 3.9e-37
Identity = 110/316 (34.81%), Postives = 176/316 (55.70%), Query Frame = 0


Query: 198 YVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPS-EDQLAISLKISRAK 257
           Y+R +    LLS AE V L+++++ GL  E       E+L C P  +D+LA+ L      
Sbjct: 103 YLREIGRIPLLSAAEEVDLARRVEAGLFAE-------EKLRCSPGLDDRLALDLD----- 162

Query: 258 LRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKG 317
               V+   LA+ +L  +N+RLV+S+A+RY   G  M DLVQ G +GL+R +EKFD ++G
Sbjct: 163 --RLVVLGRLAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARG 222

Query: 318 FKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLG-LIRNAKVRLQEKGITPSIDRIA 377
           +K STY  WWIRQ +S+AL + +R +R+P H+ E +  ++R  +  LQE+G  P+   +A
Sbjct: 223 YKFSTYATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGCEPTPQEVA 282

Query: 378 ESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLEN---NPWHGTD 437
             L++       A E + +V  L +E   SL+   GE     + D   +    +P     
Sbjct: 283 AHLDL-------APERVGEVLRLAQEPV-SLHAPVGEEDDVALGDLIEDGDAASPVESAA 342

Query: 438 IWILKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQIGLVAW 497
             +L+  + + + +TLG+RER++++L +GL D    T EEI +  G++RER+RQI     
Sbjct: 343 FLLLRQHL-EAVLSTLGERERKVVQLRYGLADGRPRTLEEIGRLFGVTRERIRQIESKTL 395

Query: 498 EKLKKAAKTRQMEAML 508
            KL+  A   Q+   L
Sbjct: 403 SKLRDHAYADQLRGYL 395

[Close]

BLAST of Csor.00g213090 vs. NCBI nr
Match: KAG6571215.1 (RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 990 bits (2560), Expect = 0.0
Identity = 510/510 (100.00%), Postives = 510/510 (100.00%), Query Frame = 0


Query: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60
           MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF
Sbjct: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60

Query: 61  SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 120
           SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM
Sbjct: 61  SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 120

Query: 121 LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180
           LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK
Sbjct: 121 LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180

Query: 181 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240
           QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE
Sbjct: 181 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240

Query: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300
           PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Sbjct: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300

Query: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 360
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 360

Query: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
           RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420

Query: 421 NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
           NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480

Query: 481 ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH
Sbjct: 481 ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510

[Close]

BLAST of Csor.00g213090 vs. NCBI nr
Match: KAG7011018.1 (RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 988 bits (2555), Expect = 0.0
Identity = 509/509 (100.00%), Postives = 509/509 (100.00%), Query Frame = 0


Query: 2   MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFS 61
           MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFS
Sbjct: 1   MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFS 60

Query: 62  PRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSML 121
           PRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSML
Sbjct: 61  PRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSML 120

Query: 122 EKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQ 181
           EKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQ
Sbjct: 121 EKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQ 180

Query: 182 LRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 241
           LRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP
Sbjct: 181 LRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 240

Query: 242 SEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL 301
           SEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL
Sbjct: 241 SEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL 300

Query: 302 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVR 361
           IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVR
Sbjct: 301 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVR 360

Query: 362 LQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 421
           LQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 422 CLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 481
           CLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE
Sbjct: 421 CLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 480

Query: 482 RVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           RVRQIGLVAWEKLKKAAKTRQMEAMLLKH
Sbjct: 481 RVRQIGLVAWEKLKKAAKTRQMEAMLLKH 509

[Close]

BLAST of Csor.00g213090 vs. NCBI nr
Match: XP_022943800.1 (RNA polymerase sigma factor sigA-like [Cucurbita moschata])

HSP 1 Score: 974 bits (2518), Expect = 0.0
Identity = 503/510 (98.63%), Postives = 506/510 (99.22%), Query Frame = 0


Query: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60
           MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF
Sbjct: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60

Query: 61  SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 120
           SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM
Sbjct: 61  SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 120

Query: 121 LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180
           LEKQWNLSFDQT+LAD  RGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK
Sbjct: 121 LEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180

Query: 181 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240
           QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE
Sbjct: 181 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240

Query: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300
           PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Sbjct: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300

Query: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 360
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 360

Query: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
           RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420

Query: 421 NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
           NCLENNPWHGTDIW+LKAEVN LITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480

Query: 481 ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           ERVRQIGLVA EKLKKAAKTR+MEAMLLKH
Sbjct: 481 ERVRQIGLVALEKLKKAAKTRKMEAMLLKH 510

[Close]

BLAST of Csor.00g213090 vs. NCBI nr
Match: XP_023513025.1 (RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] >XP_023513026.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 964 bits (2491), Expect = 0.0
Identity = 499/511 (97.65%), Postives = 505/511 (98.83%), Query Frame = 0


Query: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60
           MMATTTAITGLGAAKRLFNSSSYYSDFTEK+LY NDHRIGQTQVSPTKSVVITARSS NF
Sbjct: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKLLYVNDHRIGQTQVSPTKSVVITARSSPNF 60

Query: 61  SPRNQSSN-RHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKS 120
           SPRNQSS+ RHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKS
Sbjct: 61  SPRNQSSSKRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKS 120

Query: 121 MLEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRIS 180
           MLEKQWNLSFDQT+LAD PRGKTQKKVPVTCSGVSARQRRMSS+RKIQSKHVLMAQPRIS
Sbjct: 121 MLEKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSRRKIQSKHVLMAQPRIS 180

Query: 181 KQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGC 240
           KQLRPTIN ELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGC
Sbjct: 181 KQLRPTINSELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGC 240

Query: 241 EPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQG 300
           EPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQG
Sbjct: 241 EPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQG 300

Query: 301 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAK 360
           GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAK
Sbjct: 301 GLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAK 360

Query: 361 VRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIA 420
           VRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIA
Sbjct: 361 VRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIA 420

Query: 421 DNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLS 480
           DNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLS
Sbjct: 421 DNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLS 480

Query: 481 RERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           RERVRQIGLVA EKLKKAAKTR+MEAMLLKH
Sbjct: 481 RERVRQIGLVALEKLKKAAKTRKMEAMLLKH 511

[Close]

BLAST of Csor.00g213090 vs. NCBI nr
Match: XP_022986506.1 (RNA polymerase sigma factor sigA-like [Cucurbita maxima] >XP_022986507.1 RNA polymerase sigma factor sigA-like [Cucurbita maxima])

HSP 1 Score: 940 bits (2430), Expect = 0.0
Identity = 490/510 (96.08%), Postives = 495/510 (97.06%), Query Frame = 0


Query: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60
           MMATTTAITGLGAAKRL NSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSS NF
Sbjct: 1   MMATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNF 60

Query: 61  SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 120
           SPRNQSSNRH HCIKA       PSSPTAEP LHNSTIWEDEETDLKCTVE LLLLQKSM
Sbjct: 61  SPRNQSSNRHVHCIKAA------PSSPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSM 120

Query: 121 LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180
           LEKQWNLSFDQT+LAD PRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK
Sbjct: 121 LEKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180

Query: 181 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240
           QLRPTIN ELLQNRLKGYV+GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE
Sbjct: 181 QLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240

Query: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300
           PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Sbjct: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300

Query: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 360
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKV 360

Query: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
           RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420

Query: 421 NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
           NCLENNPWHGTDIWILKAEVNKLITTTLG+REREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSR 480

Query: 481 ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           ERVRQIGLVA EKLKKAAKTR+MEAMLLKH
Sbjct: 481 ERVRQIGLVALEKLKKAAKTRKMEAMLLKH 504

[Close]

BLAST of Csor.00g213090 vs. ExPASy TrEMBL
Match: A0A6J1FYA0 (RNA polymerase sigma factor sigA-like OS=Cucurbita moschata OX=3662 GN=LOC111448440 PE=3 SV=1)

HSP 1 Score: 974 bits (2518), Expect = 0.0
Identity = 503/510 (98.63%), Postives = 506/510 (99.22%), Query Frame = 0


Query: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60
           MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF
Sbjct: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60

Query: 61  SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 120
           SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM
Sbjct: 61  SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 120

Query: 121 LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180
           LEKQWNLSFDQT+LAD  RGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK
Sbjct: 121 LEKQWNLSFDQTVLADALRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180

Query: 181 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240
           QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE
Sbjct: 181 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240

Query: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300
           PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Sbjct: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300

Query: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 360
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 360

Query: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
           RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420

Query: 421 NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
           NCLENNPWHGTDIW+LKAEVN LITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDIWVLKAEVNNLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480

Query: 481 ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           ERVRQIGLVA EKLKKAAKTR+MEAMLLKH
Sbjct: 481 ERVRQIGLVALEKLKKAAKTRKMEAMLLKH 510

[Close]

BLAST of Csor.00g213090 vs. ExPASy TrEMBL
Match: A0A6J1J7Q5 (RNA polymerase sigma factor sigA-like OS=Cucurbita maxima OX=3661 GN=LOC111484226 PE=3 SV=1)

HSP 1 Score: 940 bits (2430), Expect = 0.0
Identity = 490/510 (96.08%), Postives = 495/510 (97.06%), Query Frame = 0


Query: 1   MMATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANF 60
           MMATTTAITGLGAAKRL NSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSS NF
Sbjct: 1   MMATTTAITGLGAAKRLLNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSPNF 60

Query: 61  SPRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 120
           SPRNQSSNRH HCIKA       PSSPTAEP LHNSTIWEDEETDLKCTVE LLLLQKSM
Sbjct: 61  SPRNQSSNRHVHCIKAA------PSSPTAEPGLHNSTIWEDEETDLKCTVEVLLLLQKSM 120

Query: 121 LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180
           LEKQWNLSFDQT+LAD PRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK
Sbjct: 121 LEKQWNLSFDQTVLADAPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 180

Query: 181 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240
           QLRPTIN ELLQNRLKGYV+GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE
Sbjct: 181 QLRPTINSELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 240

Query: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300
           PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG
Sbjct: 241 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 300

Query: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 360
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSRMLRLPTHMHERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRMLRLPTHMHERLGLIRNAKV 360

Query: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420
           RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420

Query: 421 NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480
           NCLENNPWHGTDIWILKAEVNKLITTTLG+REREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDIWILKAEVNKLITTTLGNREREIIRLYHGLDNECLTWEEISKRIGLSR 480

Query: 481 ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           ERVRQIGLVA EKLKKAAKTR+MEAMLLKH
Sbjct: 481 ERVRQIGLVALEKLKKAAKTRKMEAMLLKH 504

[Close]

BLAST of Csor.00g213090 vs. ExPASy TrEMBL
Match: A0A5D3BME8 (RNA polymerase sigma factor sigA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold602G001180 PE=3 SV=1)

HSP 1 Score: 886 bits (2290), Expect = 0.0
Identity = 461/510 (90.39%), Postives = 481/510 (94.31%), Query Frame = 0


Query: 2   MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFS 61
           M  TTAI GLGAAKRL NSSSYYSDFTEK+LYAND+R+GQTQVSPTKSVVI A+SSANFS
Sbjct: 1   MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVI-AKSSANFS 60

Query: 62  PRNQSSNRHGH-CIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 121
           P    SNRH   CIKAVKEHV+TPSSPTAEP L N+TIWEDEETDLKCTVEALLLLQKSM
Sbjct: 61  PSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWEDEETDLKCTVEALLLLQKSM 120

Query: 122 LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 181
           LEKQWNLSF+QT+  D PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISK
Sbjct: 121 LEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 180

Query: 182 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 241
           QLRPTI+PELLQNRLKGYV+GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCE
Sbjct: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCE 240

Query: 242 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 301
           PSEDQLAISLKISRA+LRS +MECSLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Sbjct: 241 PSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300

Query: 302 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 361
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360

Query: 362 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 421
           +LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 KLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420

Query: 422 NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 481
           NCLENNPWHGTD WILKAEVNKLI  TLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480

Query: 482 ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           ERVRQ+GLVA EKLKKAAKTR+MEAML+KH
Sbjct: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLIKH 509

[Close]

BLAST of Csor.00g213090 vs. ExPASy TrEMBL
Match: A0A1S4E4N5 (RNA polymerase sigma factor sigA OS=Cucumis melo OX=3656 GN=LOC103501092 PE=3 SV=1)

HSP 1 Score: 886 bits (2290), Expect = 0.0
Identity = 461/510 (90.39%), Postives = 481/510 (94.31%), Query Frame = 0


Query: 2   MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFS 61
           M  TTAI GLGAAKRL NSSSYYSDFTEK+LYAND+R+GQTQVSPTKSVVI A+SSANFS
Sbjct: 1   MMATTAIIGLGAAKRLLNSSSYYSDFTEKILYANDYRLGQTQVSPTKSVVI-AKSSANFS 60

Query: 62  PRNQSSNRHGH-CIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSM 121
           P    SNRH   CIKAVKEHV+TPSSPTAEP L N+TIWEDEETDLKCTVEALLLLQKSM
Sbjct: 61  PSYPLSNRHSQQCIKAVKEHVETPSSPTAEPWLPNTTIWEDEETDLKCTVEALLLLQKSM 120

Query: 122 LEKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISK 181
           LEKQWNLSF+QT+  D PR KT KKVPVTCSGVSARQRRMSSKRKIQSKHV MAQP+ISK
Sbjct: 121 LEKQWNLSFEQTVSTDMPREKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISK 180

Query: 182 QLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCE 241
           QLRPTI+PELLQNRLKGYV+GLLSEELLSHAEVVRLSKKIKVGLALEE KTRLKERLGCE
Sbjct: 181 QLRPTISPELLQNRLKGYVKGLLSEELLSHAEVVRLSKKIKVGLALEEHKTRLKERLGCE 240

Query: 242 PSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGG 301
           PSEDQLAISLKISRA+LRS +MECSLAREKLAMSNVRLVMSIAQRYD MGAEM DLVQGG
Sbjct: 241 PSEDQLAISLKISRAELRSRMMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGG 300

Query: 302 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKV 361
           LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKV
Sbjct: 301 LIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV 360

Query: 362 RLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 421
           +LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD
Sbjct: 361 KLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIAD 420

Query: 422 NCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 481
           NCLENNPWHGTD WILKAEVNKLI  TLGDREREIIRLYHGLDNECLTWEEISKRIGLSR
Sbjct: 421 NCLENNPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSR 480

Query: 482 ERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           ERVRQ+GLVA EKLKKAAKTR+MEAML+KH
Sbjct: 481 ERVRQVGLVALEKLKKAAKTRKMEAMLIKH 509

[Close]

BLAST of Csor.00g213090 vs. ExPASy TrEMBL
Match: A0A6J1D604 (RNA polymerase sigma factor sigA OS=Momordica charantia OX=3673 GN=LOC111017241 PE=3 SV=1)

HSP 1 Score: 867 bits (2241), Expect = 2.20e-315
Identity = 451/509 (88.61%), Postives = 473/509 (92.93%), Query Frame = 0


Query: 2   MATTTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFS 61
           M  T AI GLGAAKRL NSSSYYSDF EK+LYANDHR+GQ+QVSPTKSVVI A+SSANFS
Sbjct: 1   MMATAAIIGLGAAKRLLNSSSYYSDFPEKLLYANDHRLGQSQVSPTKSVVI-AKSSANFS 60

Query: 62  PRNQSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWEDEETDLKCTVEALLLLQKSML 121
           P   SSNRH  CIKAVKEHVDTPSSPT EP L NST WEDEE DLKCTVEALLLLQKSML
Sbjct: 61  PSFPSSNRHTQCIKAVKEHVDTPSSPTVEPWLQNSTQWEDEEIDLKCTVEALLLLQKSML 120

Query: 122 EKQWNLSFDQTMLADTPRGKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRISKQ 181
           EKQWNLSF+QT+  D  RG+TQKKVPVTCSGVSARQRRMSSKRKIQSK+  M QP+ISKQ
Sbjct: 121 EKQWNLSFEQTVPTDASRGRTQKKVPVTCSGVSARQRRMSSKRKIQSKNCFMVQPKISKQ 180

Query: 182 LRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 241
           LR TI+PELLQ RLKGYV+GL+SEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP
Sbjct: 181 LRSTISPELLQTRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEP 240

Query: 242 SEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGL 301
           SEDQLAISLKISR +LRS V+ECSLA+EKLAMSNVRLVMSIAQRYD MGAEM DLVQGGL
Sbjct: 241 SEDQLAISLKISRTELRSRVIECSLAKEKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 300

Query: 302 IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNAKVR 361
           IGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALVENSR LRLPTH+HERLGLIRNAKVR
Sbjct: 301 IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVR 360

Query: 362 LQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 421
           LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN
Sbjct: 361 LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADN 420

Query: 422 CLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 481
            LEN+PWHGTD WILKAEVNKLI  TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE
Sbjct: 421 XLENDPWHGTDTWILKAEVNKLINMTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRE 480

Query: 482 RVRQIGLVAWEKLKKAAKTRQMEAMLLKH 510
           RVRQ+GLVA EKLKKAAKTR+MEAMLLKH
Sbjct: 481 RVRQVGLVALEKLKKAAKTRKMEAMLLKH 508

[Close]

BLAST of Csor.00g213090 vs. TAIR 10
Match: AT1G64860.1 (sigma factor A )

HSP 1 Score: 632.1 bits (1629), Expect = 3.9e-181
Identity = 345/516 (66.86%), Postives = 412/516 (79.84%), Query Frame = 0


Query: 5   TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRN 64
           T A+ GL   KRL +SS Y+SD TEK L  NDH   Q  ++ TKS  ITA+ ++N+SP  
Sbjct: 3   TAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKS-GITAKKASNYSPSF 62

Query: 65  QSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE------DEETDLKCTVEALLLLQK 124
            SSNRH    KA+KE VD  S  T +P L N T  E      D++  +  +VEA+LLLQK
Sbjct: 63  PSSNRHTQSAKALKESVDVAS--TEKPWLPNGTDKELEEECYDDDDLISHSVEAILLLQK 122

Query: 125 SMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMA 184
           SMLEK WNLSF++ + ++ P   T  +KK+PV TCSG+SARQRR+ +K+K    HV  ++
Sbjct: 123 SMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVS 182

Query: 185 QPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLK 244
                KQ+R             GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK
Sbjct: 183 DVSSGKQVR-------------GYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLK 242

Query: 245 ERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD 304
           +RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM 
Sbjct: 243 DRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMS 302

Query: 305 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGL 364
           DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGL
Sbjct: 303 DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGL 362

Query: 365 IRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH 424
           IRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETH
Sbjct: 363 IRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETH 422

Query: 425 HSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISK 484
           HSYIAD  LENNPWHG D   LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISK
Sbjct: 423 HSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISK 482

Query: 485 RIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLLKH 511
           RIGLSRERVRQ+GLVA EKLK AA+ R+MEAM+LK+
Sbjct: 483 RIGLSRERVRQVGLVALEKLKHAARKRKMEAMILKN 502

[Close]

BLAST of Csor.00g213090 vs. TAIR 10
Match: AT1G64860.2 (sigma factor A )

HSP 1 Score: 586.3 bits (1510), Expect = 2.4e-167
Identity = 319/482 (66.18%), Postives = 381/482 (79.05%), Query Frame = 0


Query: 5   TTAITGLGAAKRLFNSSSYYSDFTEKVLYANDHRIGQTQVSPTKSVVITARSSANFSPRN 64
           T A+ GL   KRL +SS Y+SD TEK L  NDH   Q  ++ TKS  ITA+ ++N+SP  
Sbjct: 3   TAAVIGLNTGKRLLSSSFYHSDVTEKFLSVNDHCSSQYHIASTKS-GITAKKASNYSPSF 62

Query: 65  QSSNRHGHCIKAVKEHVDTPSSPTAEPRLHNSTIWE------DEETDLKCTVEALLLLQK 124
            SSNRH    KA+KE VD  S  T +P L N T  E      D++  +  +VEA+LLLQK
Sbjct: 63  PSSNRHTQSAKALKESVDVAS--TEKPWLPNGTDKELEEECYDDDDLISHSVEAILLLQK 122

Query: 125 SMLEKQWNLSFDQTMLADTPRGKT--QKKVPV-TCSGVSARQRRMSSKRKIQSKHV-LMA 184
           SMLEK WNLSF++ + ++ P   T  +KK+PV TCSG+SARQRR+ +K+K    HV  ++
Sbjct: 123 SMLEKSWNLSFEKAVSSEYPGKGTIRKKKIPVITCSGISARQRRIGAKKKTNMTHVKAVS 182

Query: 185 QPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLK 244
                KQ+R             GYV+G++SE++LSH EVVRLSKKIK GL L++ K+RLK
Sbjct: 183 DVSSGKQVR-------------GYVKGVISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLK 242

Query: 245 ERLGCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMD 304
           +RLGCEPS++QLA+SLKISRA+L++ +MEC LAREKLAMSNVRLVMSIAQRYD +GAEM 
Sbjct: 243 DRLGCEPSDEQLAVSLKISRAELQAWLMECHLAREKLAMSNVRLVMSIAQRYDNLGAEMS 302

Query: 305 DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGL 364
           DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVS+ALV+NSR LRLPTH+HERLGL
Sbjct: 303 DLVQGGLIGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVDNSRTLRLPTHLHERLGL 362

Query: 365 IRNAKVRLQEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETH 424
           IRNAK+RLQEKGITPSIDRIAESLNMS+KKV+NATEA+SKVFSLDR+AFPSLNGLPGETH
Sbjct: 363 IRNAKLRLQEKGITPSIDRIAESLNMSQKKVRNATEAVSKVFSLDRDAFPSLNGLPGETH 422

Query: 425 HSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREIIRLYHGLDNECLTWEEISK 477
           HSYIAD  LENNPWHG D   LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISK
Sbjct: 423 HSYIADTRLENNPWHGYDDLALKEEVSKLISATLGEREKEIIRLYYGLDKECLTWEDISK 468

[Close]

BLAST of Csor.00g213090 vs. TAIR 10
Match: AT1G08540.1 (RNApolymerase sigma subunit 2 )

HSP 1 Score: 166.8 bits (421), Expect = 4.6e-41
Identity = 136/396 (34.34%), Postives = 209/396 (52.78%), Query Frame = 0


Query: 120 MLEKQWNLSFDQTMLADTPR-GKTQKKVPVTCSGVSARQRRMSSKRKIQSKHVLMAQPRI 179
           +LE+Q ++S        T R  +  K +  T SG+ + +   S K+K      L+AQ   
Sbjct: 201 LLEEQPSVSLAVRSTRQTERKARRAKGLEKTASGIPSVKTGSSPKKK-----RLVAQ--- 260

Query: 180 SKQLRPTINPELLQNRLKGYVR-GLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERL 239
                     E+  N    Y+R    S +LL+  E   LS  I+  L LE  +T L ER 
Sbjct: 261 ----------EVDHNDPLRYLRMTTSSSKLLTVREEHELSAGIQDLLKLERLQTELTERS 320

Query: 240 GCEPSEDQLAISLKISRAKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLV 299
           G +P+  Q A +  + +  LR  +   +L ++K+  SN+RLV+SIA+ Y   G  + DLV
Sbjct: 321 GRQPTFAQWASAAGVDQKSLRQRIHHGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLV 380

Query: 300 QGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRN 359
           Q G  GL+RG EKFD++KGFK STY +WWI+Q V K+L + SRM+RLP HM E    ++ 
Sbjct: 381 QEGCRGLVRGAEKFDATKGFKFSTYAHWWIKQAVRKSLSDQSRMIRLPFHMVEATYRVKE 440

Query: 360 AKVRL-QEKGITPSIDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHS 419
           A+ +L  E G  P  + IAE+  +S K++     +     SLD++   + N  P E    
Sbjct: 441 ARKQLYSETGKHPKNEEIAEATGLSMKRLMAVLLSPKPPRSLDQKIGMNQNLKPSEV--- 500

Query: 420 YIADNCLENNPWHGTDIWI---LKAEVNKLITTTLGDREREIIRLYHGL-DNECLTWEEI 479
            IAD           DI I   ++ +++K++  +LG RE+++IR   G+ D    T +EI
Sbjct: 501 -IAD----PEAVTSEDILIKEFMRQDLDKVL-DSLGTREKQVIRWRFGMEDGRMKTLQEI 560

Query: 480 SKRIGLSRERVRQIGLVAWEKLKKAAKTRQMEAMLL 509
            + +G+SRERVRQI   A+ KLK   +   ++  L+
Sbjct: 561 GEMMGVSRERVRQIESSAFRKLKNKKRNNHLQQYLV 569

[Close]

BLAST of Csor.00g213090 vs. TAIR 10
Match: AT5G13730.1 (sigma factor 4 )

HSP 1 Score: 146.0 bits (367), Expect = 8.4e-35
Identity = 115/350 (32.86%), Postives = 169/350 (48.29%), Query Frame = 0


Query: 161 SSKRKIQSKHVLMAQPRISKQLRPTINPELLQNRLKGYVRGLLSEELLSHAEVVRLSKKI 220
           S KR+ + +   +   R+  +       E     +   V G      LS  E V+L   +
Sbjct: 76  SEKRRKRRRRRRVGYERLEPEEEENAGVEAEAETISVPVVGASRSGFLSRLEEVQLCLYL 135

Query: 221 KVGLALEERKTRLKERLGCEPSEDQLAISLKISRAKLRSSVMEC----SLAREKLAMSNV 280
           K G  LE   T ++E        + +++ L   R K + S  E       AREK+     
Sbjct: 136 KEGAKLENLGTSVEE-------NEMVSVLLASGRGKKKRSANEILCRRKEAREKITRCYR 195

Query: 281 RLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSKALV 340
           RLV+SIA  Y   G  + DL+Q G IGLLRG E+FD  +G+K+STYVYWWI+Q + +A+ 
Sbjct: 196 RLVVSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIA 255

Query: 341 ENSRMLRLPTHMHERLGLIRNAKVRLQEK-GITPSIDRIAESLNMSKKKVKNATEAISKV 400
             SR+++LP  M E    +  A   L  K    PS + IAE LN++   V+ A E     
Sbjct: 256 HKSRLVKLPGSMWELTAKVAEASNVLTRKLRRQPSCEEIAEHLNLNVSAVRLAVERSRSP 315

Query: 401 FSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDIWILKAEVNKLITTTLGDREREI 460
            SLDR A  +     G      I     E  P        +K E+ +L+  +L  RE  +
Sbjct: 316 VSLDRVASQN-----GRMTLQEIVRGPDETRPEEMVKREHMKHEIEQLL-GSLTARESRV 375

Query: 461 IRLYHGLDNEC-LTWEEISKRIGLSRERVRQIGLVAWEKLKKAAKTRQME 505
           + LY GL+ E  +++EEI K + LSRERVRQI  +A +KL+       ++
Sbjct: 376 LGLYFGLNGETPMSFEEIGKSLKLSRERVRQINGIALKKLRNVHNVNDLK 412

[Close]

BLAST of Csor.00g213090 vs. TAIR 10
Match: AT2G36990.1 (RNApolymerase sigma-subunit F )

HSP 1 Score: 145.6 bits (366), Expect = 1.1e-34
Identity = 99/313 (31.63%), Postives = 168/313 (53.67%), Query Frame = 0


Query: 195 LKGYVRGLLSEELLSHAEVVRLSKKIKVGLALEERKTRLKERLGCEPSEDQLAISLKISR 254
           L+ ++ G  +++LL+  E   L   I+  L LE+ KT+L+ + GCEP+  + A ++ IS 
Sbjct: 235 LQLFLWGPETKQLLTAKEEAELISHIQHLLKLEKVKTKLESQNGCEPTIGEWAEAMGISS 294

Query: 255 AKLRSSVMECSLAREKLAMSNVRLVMSIAQRYDKMGAEMDDLVQGGLIGLLRGIEKFDSS 314
             L+S +     +REKL  +N+RLV+ IA++Y   G    DL+Q G +GL++ +EKF   
Sbjct: 295 PVLKSDIHRGRSSREKLITANLRLVVHIAKQYQNRGLNFQDLLQEGSMGLMKSVEKFKPQ 354

Query: 315 KGFKISTYVYWWIRQGVSKALVENSRMLRLPTHMHERLGLIRNA-KVRLQEKGITPSIDR 374
            G + +TY YWWIRQ + K++ +NSR +RLP +++  LG +  A K  +QE    PS + 
Sbjct: 355 SGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLGKVSEARKTCVQEGNYRPSKEE 414

Query: 375 IAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNCLENNPWHGTDI 434
           +A  + +S +K+           S+ +  +   +     T      D+ +E  P      
Sbjct: 415 LAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQD----TTFQEITPDSGIE-TPTMSVGK 474

Query: 435 WILKAEVNKLITTTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQIGLVAWE 494
            +++  V  L+   L  +ER II+L  G+D  +  +  EI +  GLS+ERVRQ+   A  
Sbjct: 475 QLMRNHVRNLL-NVLSPKERRIIKLRFGIDGGKQRSLSEIGEIYGLSKERVRQLESRALY 534

Query: 495 KLKKAAKTRQMEA 506
           +LK+   +  + A
Sbjct: 535 RLKQNMNSHGLHA 541

The following BLAST results are available for this feature:

BLAST of Csor.00g213090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24629	5.4e-180	66.86	RNA polymerase sigma factor sigA OS=Arabidopsis thaliana OX=3702 GN=SIGA PE=1 SV...	[more]
Q0J7T6	4.5e-126	49.15	RNA polymerase sigma factor sigA OS=Oryza sativa subsp. japonica OX=39947 GN=SIG...	[more]
O22056	6.5e-40	34.34	RNA polymerase sigma factor sigB OS=Arabidopsis thaliana OX=3702 GN=SIGB PE=2 SV...	[more]
Q03065	1.0e-37	32.42	RNA polymerase sigma-B factor OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX ...	[more]
P18182	3.9e-37	34.81	RNA polymerase principal sigma factor HrdA OS=Streptomyces coelicolor (strain AT...	[more]

BLAST of Csor.00g213090 vs. NCBI nr


Match Name	Identity	Description
KAG6571215.1	100.00	RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia...	[more]
KAG7011018.1	100.00	RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. argyros...	[more]
XP_022943800.1	98.63	RNA polymerase sigma factor sigA-like [Cucurbita moschata]	[more]
XP_023513025.1	97.65	RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] >XP_023513026...	[more]
XP_022986506.1	96.08	RNA polymerase sigma factor sigA-like [Cucurbita maxima] >XP_022986507.1 RNA pol...	[more]

BLAST of Csor.00g213090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FYA0	0.0	98.63	RNA polymerase sigma factor sigA-like OS=Cucurbita moschata OX=3662 GN=LOC111448...	[more]
A0A6J1J7Q5	0.0	96.08	RNA polymerase sigma factor sigA-like OS=Cucurbita maxima OX=3661 GN=LOC11148422...	[more]
A0A5D3BME8	0.0	90.39	RNA polymerase sigma factor sigA OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S4E4N5	0.0	90.39	RNA polymerase sigma factor sigA OS=Cucumis melo OX=3656 GN=LOC103501092 PE=3 SV...	[more]
A0A6J1D604	2.20e-315	88.61	RNA polymerase sigma factor sigA OS=Momordica charantia OX=3673 GN=LOC111017241 ...	[more]

BLAST of Csor.00g213090 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64860.1	3.9e-181	66.86	sigma factor A	[more]
AT1G64860.2	2.4e-167	66.18	sigma factor A	[more]
AT1G08540.1	4.6e-41	34.34	RNApolymerase sigma subunit 2	[more]
AT5G13730.1	8.4e-35	32.86	sigma factor 4	[more]
AT2G36990.1	1.1e-34	31.63	RNApolymerase sigma-subunit F	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000943	RNA polymerase sigma-70	PRINTS	PR00046	SIGMA70FCT	coord: 319..327 score: 64.52 coord: 468..483 score: 48.75 coord: 448..460 score: 37.22 coord: 295..308 score: 49.68 coord: 483..494 score: 48.55
IPR000943	RNA polymerase sigma-70	PROSITE	PS00715	SIGMA70_1	coord: 295..308
None	No IPR available	GENE3D	1.10.601.10	RNA Polymerase Primary Sigma Factor	coord: 141..341 e-value: 3.2E-30 score: 107.8
None	No IPR available	PANTHER	PTHR30603:SF14	RNA POLYMERASE SIGMA FACTOR SIGA	coord: 4..510
None	No IPR available	PANTHER	PTHR30603	RNA POLYMERASE SIGMA FACTOR RPO	coord: 4..510
None	No IPR available	CDD	cd06171	Sigma70_r4	coord: 447..486 e-value: 7.77741E-7 score: 44.0174
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 342..392 e-value: 2.3E-7 score: 32.8
IPR036388	Winged helix-like DNA-binding domain superfamily	GENE3D	1.10.10.10		coord: 426..504 e-value: 6.6E-20 score: 72.8
IPR007630	RNA polymerase sigma-70 region 4	PFAM	PF04545	Sigma70_r4	coord: 447..496 e-value: 1.5E-10 score: 40.4
IPR007624	RNA polymerase sigma-70 region 3	PFAM	PF04539	Sigma70_r3	coord: 351..421 e-value: 1.4E-11 score: 44.3
IPR007627	RNA polymerase sigma-70 region 2	PFAM	PF04542	Sigma70_r2	coord: 273..339 e-value: 1.6E-16 score: 59.8
IPR014284	RNA polymerase sigma-70 like domain	TIGRFAM	TIGR02937	TIGR02937	coord: 267..497 e-value: 2.5E-25 score: 87.0
IPR013325	RNA polymerase sigma factor, region 2	SUPERFAMILY	88946	Sigma2 domain of RNA polymerase sigma factors	coord: 194..340
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 343..399
IPR013324	RNA polymerase sigma factor, region 3/4-like	SUPERFAMILY	88659	Sigma3 and sigma4 domains of RNA polymerase sigma factors	coord: 424..500

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g213090.m01	Csor.00g213090.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071482	cellular response to light stimulus
biological_process	GO:0071461	cellular response to redox state
biological_process	GO:0080005	photosystem stoichiometry adjustment
biological_process	GO:2000142	regulation of DNA-templated transcription, initiation
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016987	sigma factor activity
molecular_function	GO:0003700	DNA-binding transcription factor activity